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Changing getAllPossibleDataPropsForIndividual to only call getVClasses once. NIHVIVO-2002

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This commit is contained in:
bdc34 2011-02-04 18:05:31 +00:00
parent dad29a5516
commit 0c6aa67e06
1 changed files with 66 additions and 56 deletions
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122
webapp/src/edu/cornell/mannlib/vitro/webapp/dao/jena/DataPropertyDaoJena.java
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@ -418,9 +418,10 @@ public class DataPropertyDaoJena extends PropertyDaoJena implements
public Collection<DataProperty> getAllPossibleDatapropsForIndividual(String individualURI) {
Individual ind = getWebappDaoFactory().getIndividualDao().getIndividualByURI(individualURI);
Collection<DataProperty> dpColl = new ArrayList<DataProperty>();
List<String> vclassURIs = getVClassURIs(ind);
try {
for (VClass currClass : ind.getVClasses(true)) {
for (VClass currClass : ind.getVClasses( DIRECT )) {
List<DataProperty> currList = getDatapropsForClass(currClass.getURI());
for (Iterator<DataProperty> dpIter = currList.iterator(); dpIter.hasNext();) {
DataProperty dp = (DataProperty) dpIter.next();
@ -444,7 +445,7 @@ public class DataPropertyDaoJena extends PropertyDaoJena implements
// now change range datatype based on individual
// TODO: rethink all these methods to reduce inefficiency
for (DataProperty dp : dpColl) {
dp.setRangeDatatypeURI(getRequiredDatatypeURI(ind, dp));
dp.setRangeDatatypeURI(getRequiredDatatypeURI(ind, dp, vclassURIs));
}
}
} catch (ProfileException pe) {
@ -466,59 +467,68 @@ public class DataPropertyDaoJena extends PropertyDaoJena implements
);
}
public String getRequiredDatatypeURI(Individual individual, DataProperty dataprop) {
OntModel ontModel = getOntModelSelector().getFullModel();
String datatypeURI = dataprop.getRangeDatatypeURI();
List<String> vclassURIs = null;
if (reasoningAvailable()) {
vclassURIs = new ArrayList<String>();
for (VClass vc : individual.getVClasses(INDIRECT)) {
if (vc.getURI() != null) {
vclassURIs.add(vc.getURI());
}
}
} else {
vclassURIs = getSupertypeURIs(individual);
}
ontModel.enterCriticalSection(Lock.READ);
try {
// get universal restrictions applicable to data property
Iterator<Resource> restIt = ontModel.listSubjectsWithProperty(OWL.onProperty, ontModel.getResource(dataprop.getURI()));
while (restIt.hasNext()) {
Resource restRes = restIt.next();
if (restRes.canAs(Restriction.class)) {
Restriction rest = (Restriction) restRes.as(Restriction.class);
if (rest.isAllValuesFromRestriction()) {
AllValuesFromRestriction avfrest = rest.asAllValuesFromRestriction();
if (avfrest.getAllValuesFrom() != null) {
// check if the individual has the restriction as one of its types
if (!individual.isAnonymous() &&
ontModel.contains(ontModel.getResource(individual.getURI()),
RDF.type,
rest)
) {
datatypeURI = avfrest.getAllValuesFrom().getURI();
break;
} else {
// check if the restriction applies to one of the individual's types
List<Resource> equivOrSubResources = new ArrayList<Resource>();
equivOrSubResources.addAll(ontModel.listSubjectsWithProperty(RDFS.subClassOf, rest).toList());
equivOrSubResources.addAll(ontModel.listSubjectsWithProperty(OWL.equivalentClass, rest).toList());
for(Resource equivOrSubRes : equivOrSubResources) {
if (!equivOrSubRes.isAnon() && vclassURIs.contains(equivOrSubRes.getURI())) {
datatypeURI = avfrest.getAllValuesFrom().getURI();
break;
}
}
}
}
}
}
}
} finally {
ontModel.leaveCriticalSection();
}
return datatypeURI;
private String getRequiredDatatypeURI(Individual individual, DataProperty dataprop, List<String> vclassURIs) {
OntModel ontModel = getOntModelSelector().getFullModel();
String datatypeURI = dataprop.getRangeDatatypeURI();
ontModel.enterCriticalSection(Lock.READ);
try {
// get universal restrictions applicable to data property
Iterator<Resource> restIt = ontModel.listSubjectsWithProperty(OWL.onProperty, ontModel.getResource(dataprop.getURI()));
while (restIt.hasNext()) {
Resource restRes = restIt.next();
if (restRes.canAs(Restriction.class)) {
Restriction rest = (Restriction) restRes.as(Restriction.class);
if (rest.isAllValuesFromRestriction()) {
AllValuesFromRestriction avfrest = rest.asAllValuesFromRestriction();
if (avfrest.getAllValuesFrom() != null) {
// check if the individual has the restriction as one of its types
if (!individual.isAnonymous() &&
ontModel.contains(ontModel.getResource(individual.getURI()),
RDF.type,
rest)
) {
datatypeURI = avfrest.getAllValuesFrom().getURI();
break;
} else {
// check if the restriction applies to one of the individual's types
List<Resource> equivOrSubResources = new ArrayList<Resource>();
equivOrSubResources.addAll(ontModel.listSubjectsWithProperty(RDFS.subClassOf, rest).toList());
equivOrSubResources.addAll(ontModel.listSubjectsWithProperty(OWL.equivalentClass, rest).toList());
for(Resource equivOrSubRes : equivOrSubResources) {
if (!equivOrSubRes.isAnon() && vclassURIs.contains(equivOrSubRes.getURI())) {
datatypeURI = avfrest.getAllValuesFrom().getURI();
break;
}
}
}
}
}
}
}
} finally {
ontModel.leaveCriticalSection();
}
return datatypeURI;
}
public String getRequiredDatatypeURI(Individual individual, DataProperty dataprop) {
return getRequiredDatatypeURI(individual,dataprop,getVClassURIs(individual));
}
private List<String> getVClassURIs(Individual individual){
List<String> vclassURIs = null;
if (reasoningAvailable()) {
vclassURIs = new ArrayList<String>();
for (VClass vc : individual.getVClasses(INDIRECT)) {
if (vc.getURI() != null) {
vclassURIs.add(vc.getURI());
}
}
} else {
vclassURIs = getSupertypeURIs(individual);
}
return vclassURIs;
}
private boolean DIRECT = true;