Merge branch 'develop' into feature/fauxEditing

Conflicts:
	webapp/src/edu/cornell/mannlib/vitro/webapp/utils/configuration/ConfigurationBeanLoader.java
	webapp/src/edu/cornell/mannlib/vitro/webapp/utils/configuration/ConfigurationRdfParser.java
	webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/Critical.java

webapp/src/edu/cornell/mannlib/vitro/webapp/dao/jena/FauxPropertyDaoJena.java

@@ -34,9 +34,9 @@ import edu.cornell.mannlib.vitro.webapp.dao.InsertException;
 import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
 import edu.cornell.mannlib.vitro.webapp.utils.SparqlQueryRunner;
 import edu.cornell.mannlib.vitro.webapp.utils.SparqlQueryRunner.QueryParser;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockableOntModel;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockedOntModel;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockingOntModelSelector;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockableOntModel;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockableOntModelSelector;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockedOntModel;
 
 /**
  * TODO
@@ -80,11 +80,11 @@ public class FauxPropertyDaoJena extends JenaBaseDao implements FauxPropertyDao
 	// The instance
 	// ----------------------------------------------------------------------
 
-	private final LockingOntModelSelector models;
+	private final LockableOntModelSelector models;
 
 	public FauxPropertyDaoJena(WebappDaoFactoryJena wadf) {
 		super(wadf);
-		this.models = new LockingOntModelSelector(wadf.getOntModelSelector());
+		this.models = new LockableOntModelSelector(wadf.getOntModelSelector());
 	}
 
 	/**

webapp/src/edu/cornell/mannlib/vitro/webapp/rdfservice/impl/logging/LoggingRDFService.java

@@ -126,4 +126,9 @@ public class LoggingRDFService implements RDFService {
 	public void close() {
 		innerService.close();
 	}
+
+	@Override
+	public String toString() {
+		return "LoggingRDFService[inner=" + innerService + "]";
+	}
 }

webapp/src/edu/cornell/mannlib/vitro/webapp/rdfservice/impl/logging/LoggingRDFServiceFactory.java

@@ -40,4 +40,9 @@ public class LoggingRDFServiceFactory implements RDFServiceFactory {
 		factory.unregisterListener(changeListener);
 	}
 
+	@Override
+	public String toString() {
+		return "LoggingRDFServiceFactory[factory=" + factory + "]";
+	}
+
 }

webapp/src/edu/cornell/mannlib/vitro/webapp/servlet/setup/rdfsetup/impl/sdb/ContentDataStructuresProviderSDB.java

@@ -39,6 +39,7 @@ import edu.cornell.mannlib.vitro.webapp.modelaccess.ontmodels.UnionModelsOntMode
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.sdb.RDFServiceFactorySDB;
+import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.logging.LoggingRDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.servlet.setup.JenaDataSourceSetupBase;
 import edu.cornell.mannlib.vitro.webapp.servlet.setup.rdfsetup.impl.ContentDataStructuresProvider;
 import edu.cornell.mannlib.vitro.webapp.startup.StartupStatus;
@@ -122,7 +123,8 @@ public class ContentDataStructuresProviderSDB extends
 			setupSDB(store);
 		}
 
-		return new RDFServiceFactorySDB(ds, storeDesc);
+		return new LoggingRDFServiceFactory(new RDFServiceFactorySDB(ds,
+				storeDesc));
 	}
 
 	/**

webapp/src/edu/cornell/mannlib/vitro/webapp/servlet/setup/rdfsetup/impl/sparql/ContentDataStructuresProviderSPARQL.java

@@ -17,6 +17,7 @@ import edu.cornell.mannlib.vitro.webapp.modelaccess.ontmodels.OntModelCache;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.RDFServiceFactorySingle;
+import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.logging.LoggingRDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.sparql.RDFServiceSparql;
 import edu.cornell.mannlib.vitro.webapp.servlet.setup.rdfsetup.impl.ContentDataStructuresProvider;
 import edu.cornell.mannlib.vitro.webapp.startup.StartupStatus;
@@ -58,8 +59,8 @@ public class ContentDataStructuresProviderSPARQL extends
 		this.updateEndpointURI = props
 				.getProperty(PROPERTY_SPARQL_UPDATE_ENDPOINT_URI);
 
-		this.rdfService = createRDFService();
-		this.rdfServiceFactory = createRDFServiceFactory();
+		this.rdfServiceFactory = createRDFServiceFactory(createRDFService());
+		this.rdfService = this.rdfServiceFactory.getRDFService();
 		this.dataset = createDataset();
 		this.modelMaker = createModelMaker();
 	}
@@ -75,8 +76,9 @@ public class ContentDataStructuresProviderSPARQL extends
 		}
 	}
 
-	private RDFServiceFactory createRDFServiceFactory() {
-		return new RDFServiceFactorySingle(this.rdfService);
+	private RDFServiceFactory createRDFServiceFactory(RDFService service) {
+		return new LoggingRDFServiceFactory(
+				new RDFServiceFactorySingle(service));
 	}
 
 	private Dataset createDataset() {

webapp/src/edu/cornell/mannlib/vitro/webapp/servlet/setup/rdfsetup/impl/tdb/ConfigurationDataStructuresProviderTDB.java

@@ -22,6 +22,7 @@ import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.RDFServiceFactorySingle;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.tdb.RDFServiceTDB;
+import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.logging.LoggingRDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.servlet.setup.rdfsetup.impl.ConfigurationDataStructuresProvider;
 import edu.cornell.mannlib.vitro.webapp.startup.StartupStatus;
 import edu.cornell.mannlib.vitro.webapp.utils.logging.ToString;
@@ -60,8 +61,8 @@ public class ConfigurationDataStructuresProviderTDB extends
 				+ DIRECTORY_TDB;
 
 		try {
-			this.rdfService = new RDFServiceTDB(tdbPath);
-			this.rdfServiceFactory = createRDFServiceFactory();
+			this.rdfServiceFactory = createRDFServiceFactory(tdbPath);
+			this.rdfService = this.rdfServiceFactory.getRDFService();
 			this.dataset = new RDFServiceDataset(this.rdfService);
 			this.modelMaker = createModelMaker();
 			ss.info(ctxListener, "Initialized the RDF source for TDB");
@@ -75,8 +76,10 @@ public class ConfigurationDataStructuresProviderTDB extends
 		TDB.getContext().setTrue(TDB.symUnionDefaultGraph);
 	}
 
-	private RDFServiceFactory createRDFServiceFactory() {
-		return new RDFServiceFactorySingle(this.rdfService);
+	private RDFServiceFactory createRDFServiceFactory(String tdbPath)
+			throws IOException {
+		return new LoggingRDFServiceFactory(new RDFServiceFactorySingle(
+				new RDFServiceTDB(tdbPath)));
 	}
 
 	private ModelMaker createModelMaker() {

webapp/src/edu/cornell/mannlib/vitro/webapp/servlet/setup/rdfsetup/impl/tdb/ContentDataStructuresProviderTDB.java

@@ -21,6 +21,7 @@ import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.RDFServiceFactorySingle;
 import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.tdb.RDFServiceTDB;
+import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.logging.LoggingRDFServiceFactory;
 import edu.cornell.mannlib.vitro.webapp.servlet.setup.rdfsetup.impl.ContentDataStructuresProvider;
 import edu.cornell.mannlib.vitro.webapp.startup.StartupStatus;
 import edu.cornell.mannlib.vitro.webapp.utils.logging.ToString;
@@ -74,7 +75,8 @@ public class ContentDataStructuresProviderTDB extends
 	}
 
 	private RDFServiceFactory createRDFServiceFactory() {
-		return new RDFServiceFactorySingle(this.rdfService);
+		return new LoggingRDFServiceFactory(new RDFServiceFactorySingle(
+				this.rdfService));
 	}
 
 	private ModelMaker createModelMaker() {

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/configuration/ConfigurationBeanLoader.java

@@ -6,6 +6,7 @@ import static com.hp.hpl.jena.rdf.model.ResourceFactory.createResource;
 
 import java.util.HashSet;
 import java.util.List;
+import java.util.Objects;
 import java.util.Set;
 
 import javax.servlet.ServletContext;
@@ -15,8 +16,8 @@ import com.hp.hpl.jena.rdf.model.Model;
 import com.hp.hpl.jena.rdf.model.Resource;
 import com.hp.hpl.jena.vocabulary.RDF;
 
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockableModel;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockedModel;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockableModel;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockedModel;
 
 /**
  * Load one or more Configuration beans from a specified model.
@@ -50,7 +51,7 @@ public class ConfigurationBeanLoader {
 	// ----------------------------------------------------------------------
 
 	/** Must not be null. */
-	private final LockableModel model;
+	private final LockableModel locking;
 
 	/**
 	 * May be null, but the loader will be unable to satisfy instances of
@@ -65,26 +66,34 @@ public class ConfigurationBeanLoader {
 	private final HttpServletRequest req;
 
 	public ConfigurationBeanLoader(Model model) {
-		this(model, null, null);
+		this(new LockableModel(model), null, null);
+	}
+
+	public ConfigurationBeanLoader(LockableModel locking) {
+		this(locking, null, null);
 	}
 
 	public ConfigurationBeanLoader(Model model, ServletContext ctx) {
-		this(model, ctx, null);
+		this(new LockableModel(model), ctx, null);
+	}
+
+	public ConfigurationBeanLoader(LockableModel locking, ServletContext ctx) {
+		this(locking, ctx, null);
 	}
 
 	public ConfigurationBeanLoader(Model model, HttpServletRequest req) {
-		this(model,
-				(req == null) ? null : req.getSession().getServletContext(),
-				req);
+		this(new LockableModel(model), req);
 	}
 
-	private ConfigurationBeanLoader(Model model, ServletContext ctx,
+	public ConfigurationBeanLoader(LockableModel locking, HttpServletRequest req) {
+		this(locking, (req == null) ? null : req.getSession()
+				.getServletContext(), req);
+	}
+
+	private ConfigurationBeanLoader(LockableModel locking, ServletContext ctx,
 			HttpServletRequest req) {
-		if (model == null) {
-			throw new NullPointerException("model may not be null.");
-		}
-
-		this.model = new LockableModel(model);
+		this.locking = Objects.requireNonNull(locking,
+				"locking may not be null.");
 		this.req = req;
 		this.ctx = ctx;
 	}
@@ -102,8 +111,8 @@ public class ConfigurationBeanLoader {
 		}
 
 		try {
-			ConfigurationRdf<T> parsedRdf = ConfigurationRdfParser.parse(model,
-					uri, resultClass);
+			ConfigurationRdf<T> parsedRdf = ConfigurationRdfParser.parse(
+					locking, uri, resultClass);
 			WrappedInstance<T> wrapper = InstanceWrapper.wrap(parsedRdf
 					.getConcreteClass());
 			wrapper.satisfyInterfaces(ctx, req);
@@ -122,7 +131,7 @@ public class ConfigurationBeanLoader {
 	public <T> Set<T> loadAll(Class<T> resultClass)
 			throws ConfigurationBeanLoaderException {
 		Set<String> uris = new HashSet<>();
-		try (LockedModel m = model.read()) {
+		try (LockedModel m = locking.read()) {
 			List<Resource> resources = m.listResourcesWithProperty(RDF.type,
 					createResource(toJavaUri(resultClass))).toList();
 			for (Resource r : resources) {

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/configuration/ConfigurationRdfParser.java

@@ -11,6 +11,7 @@ import static edu.cornell.mannlib.vitro.webapp.utils.configuration.Configuration
 import java.lang.reflect.Modifier;
 import java.util.HashSet;
 import java.util.List;
+import java.util.Objects;
 import java.util.Set;
 
 import com.hp.hpl.jena.rdf.model.Property;
@@ -22,67 +23,61 @@ import com.hp.hpl.jena.vocabulary.RDF;
 
 import edu.cornell.mannlib.vitro.webapp.utils.configuration.PropertyType.PropertyStatement;
 import edu.cornell.mannlib.vitro.webapp.utils.configuration.PropertyType.PropertyTypeException;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockableModel;
-import edu.cornell.mannlib.vitro.webapp.utils.jena.Critical.LockedModel;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockableModel;
+import edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection.LockedModel;
 
 /**
  * Parse the RDF for a single individual in the model to create a
  * ConfigurationRdf object.
  */
 public class ConfigurationRdfParser {
-	public static <T> ConfigurationRdf<T> parse(LockableModel model,
+	public static <T> ConfigurationRdf<T> parse(LockableModel locking,
 			String uri, Class<T> resultClass)
 			throws InvalidConfigurationRdfException {
-		if (model == null) {
-			throw new NullPointerException("model may not be null.");
-		}
-		if (uri == null) {
-			throw new NullPointerException("uri may not be null.");
-		}
-		if (resultClass == null) {
-			throw new NullPointerException("resultClass may not be null.");
-		}
+		Objects.requireNonNull(locking, "locking may not be null.");
+		Objects.requireNonNull(uri, "uri may not be null.");
+		Objects.requireNonNull(resultClass, "resultClass may not be null.");
 
-		confirmExistenceInModel(model, uri);
+		confirmExistenceInModel(locking, uri);
 
-		confirmEligibilityForResultClass(model, uri, resultClass);
+		confirmEligibilityForResultClass(locking, uri, resultClass);
 
-		Set<PropertyStatement> properties = loadProperties(model, uri);
+		Set<PropertyStatement> properties = loadProperties(locking, uri);
 
-		Class<? extends T> concreteClass = determineConcreteClass(model, uri,
+		Class<? extends T> concreteClass = determineConcreteClass(locking, uri,
 				resultClass);
 
 		return new ConfigurationRdf<T>(concreteClass, properties);
 	}
 
-	private static void confirmExistenceInModel(LockableModel model, String uri)
-			throws InvalidConfigurationRdfException {
+	private static void confirmExistenceInModel(LockableModel locking,
+			String uri) throws InvalidConfigurationRdfException {
 		Selector s = new SimpleSelector(createResource(uri), null,
 				(RDFNode) null);
-		try (LockedModel m = model.read()) {
+		try (LockedModel m = locking.read()) {
 			if (m.listStatements(s).toList().isEmpty()) {
 				throw individualDoesNotAppearInModel(uri);
 			}
 		}
 	}
 
-	private static void confirmEligibilityForResultClass(LockableModel model,
+	private static void confirmEligibilityForResultClass(LockableModel locking,
 			String uri, Class<?> resultClass)
 			throws InvalidConfigurationRdfException {
 		Statement s = createStatement(createResource(uri), RDF.type,
 				createResource(toJavaUri(resultClass)));
-		try (LockedModel m = model.read()) {
+		try (LockedModel m = locking.read()) {
 			if (!m.contains(s)) {
 				throw noTypeStatementForResultClass(s);
 			}
 		}
 	}
 
-	private static Set<PropertyStatement> loadProperties(LockableModel model,
+	private static Set<PropertyStatement> loadProperties(LockableModel locking,
 			String uri) throws InvalidConfigurationRdfException {
 		Set<PropertyStatement> set = new HashSet<>();
 
-		try (LockedModel m = model.read()) {
+		try (LockedModel m = locking.read()) {
 			List<Statement> rawStatements = m.listStatements(
 					m.getResource(uri), (Property) null, (RDFNode) null)
 					.toList();
@@ -108,11 +103,11 @@ public class ConfigurationRdfParser {
 	}
 
 	private static <T> Class<? extends T> determineConcreteClass(
-			LockableModel model, String uri, Class<T> resultClass)
+			LockableModel locking, String uri, Class<T> resultClass)
 			throws InvalidConfigurationRdfException {
 		Set<Class<? extends T>> concreteClasses = new HashSet<>();
 
-		try (LockedModel m = model.read()) {
+		try (LockedModel m = locking.read()) {
 			for (RDFNode node : m.listObjectsOfProperty(createResource(uri),
 					RDF.type).toSet()) {
 				if (!node.isURIResource()) {

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/Critical.java

@@ -1,149 +0,0 @@
-/* $This file is distributed under the terms of the license in /doc/license.txt$ */
-
-package edu.cornell.mannlib.vitro.webapp.utils.jena;
-
-import com.hp.hpl.jena.ontology.OntModel;
-import com.hp.hpl.jena.rdf.model.Model;
-import com.hp.hpl.jena.shared.Lock;
-
-import edu.cornell.mannlib.vitro.webapp.dao.jena.OntModelSelector;
-import edu.cornell.mannlib.vitro.webapp.rdfservice.adapters.AbstractModelDecorator;
-import edu.cornell.mannlib.vitro.webapp.rdfservice.adapters.AbstractOntModelDecorator;
-
-/**
- * AutoCloseable helper classes for using models in a try-with-resources block.
- * 
- * TODO - create separate classes in criticalsection package
- * Locked<? extends Model>
- * LockerFor<? extends Model>
- * Add to develop.
- * Remove Critical and convert configurationBeanLoader
- * Merge to faux.
- */
-public abstract class Critical {
-	/**
-	 * Use this when you have a bare OntModelSelector. It returns
-	 * LockableOntModels, which can then be locked in a critical section.
-	 * 
-	 * <pre>
-	 * LockingOntModelSelector lockingOms = new LockingOntModelSelector(oms);
-	 * </pre>
-	 */
-	public static class LockingOntModelSelector {
-		private final OntModelSelector oms;
-
-		public LockingOntModelSelector(OntModelSelector oms) {
-			this.oms = oms;
-		}
-
-		public LockableOntModel getDisplayModel() {
-			return new LockableOntModel(oms.getDisplayModel());
-		}
-
-		public LockableOntModel getTBoxModel() {
-			return new LockableOntModel(oms.getTBoxModel());
-		}
-	}
-
-	/**
-	 * Returned by the LockingOntModelSelector, or it can be wrapped around a
-	 * bare OntModel. Cannot be used without locking.
-	 * 
-	 * <pre>
-	 * try (LockedOntModel m = lockingOms.getDisplayModel.read()) {
-	 *    ...
-	 * }
-	 * </pre>
-	 */
-	public static class LockableOntModel {
-		private final OntModel ontModel;
-
-		public LockableOntModel(OntModel ontModel) {
-			this.ontModel = ontModel;
-		}
-
-		public LockedOntModel read() {
-			ontModel.enterCriticalSection(Lock.READ);
-			return new LockedOntModel(ontModel);
-		}
-
-		public LockedOntModel write() {
-			ontModel.enterCriticalSection(Lock.WRITE);
-			return new LockedOntModel(ontModel);
-		}
-	}
-
-	/**
-	 * A simple OntModel, except that it can only be created by locking a
-	 * LockableOntModel. It is AutoCloseable, but the close method has been
-	 * hijacked to simply release the lock, and not to actually close the
-	 * wrapped model.
-	 */
-	public static class LockedOntModel extends AbstractOntModelDecorator
-			implements AutoCloseable {
-
-		private LockedOntModel(OntModel m) {
-			super(m);
-		}
-
-		/**
-		 * Just unlocks the model. Doesn't actually close it, because we may
-		 * want to use it again.
-		 */
-		@Override
-		public void close() {
-			super.leaveCriticalSection();
-		}
-	}
-
-	/**
-	 * Can be wrapped around a bare OntModel. Cannot be used without locking.
-	 * 
-	 * <pre>
-	 * try (LockedModel m = lockableModel.read()) {
-	 *    ...
-	 * }
-	 * </pre>
-	 */
-	public static class LockableModel {
-		private final Model model;
-
-		public LockableModel(Model model) {
-			this.model = model;
-		}
-
-		public LockedModel read() {
-			model.enterCriticalSection(Lock.READ);
-			return new LockedModel(model);
-		}
-
-		public LockedModel write() {
-			model.enterCriticalSection(Lock.WRITE);
-			return new LockedModel(model);
-		}
-	}
-
-	/**
-	 * A simple Model, except that it can only be created by locking a
-	 * LockableModel. It is AutoCloseable, but the close method has been
-	 * hijacked to simply release the lock, and not to actually close the
-	 * wrapped model.
-	 */
-	public static class LockedModel extends AbstractModelDecorator
-			implements AutoCloseable {
-
-		private LockedModel(Model m) {
-			super(m);
-		}
-
-		/**
-		 * Just unlocks the model. Doesn't actually close it, because we may
-		 * want to use it again.
-		 */
-		@Override
-		public void close() {
-			super.leaveCriticalSection();
-		}
-	}
-
-}

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/criticalsection/LockableModel.java

@@ -0,0 +1,39 @@
+/* $This file is distributed under the terms of the license in /doc/license.txt$ */
+
+package edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection;
+
+import java.util.Objects;
+
+import com.hp.hpl.jena.rdf.model.Model;
+import com.hp.hpl.jena.shared.Lock;
+
+/**
+ * Makes it easy to use a Jena Model in a try-with-resources block. At the end
+ * of the block, the close() method will not close the model, but will merely
+ * release the lock.
+ * 
+ * Wraps around a bare Model. Cannot be used without locking.
+ * 
+ * <pre>
+ * try (LockedModel m = new LockableModel(model).read()) {
+ *    ...
+ * }
+ * </pre>
+ */
+public class LockableModel {
+	private final Model model;
+
+	public LockableModel(Model model) {
+		this.model = Objects.requireNonNull(model, "model may not be null.");
+	}
+
+	public LockedModel read() {
+		model.enterCriticalSection(Lock.READ);
+		return new LockedModel(model);
+	}
+
+	public LockedModel write() {
+		model.enterCriticalSection(Lock.WRITE);
+		return new LockedModel(model);
+	}
+}

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/criticalsection/LockableOntModel.java

@@ -0,0 +1,49 @@
+/* $This file is distributed under the terms of the license in /doc/license.txt$ */
+
+package edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection;
+
+import java.util.Objects;
+
+import com.hp.hpl.jena.ontology.OntModel;
+import com.hp.hpl.jena.shared.Lock;
+
+/**
+ * Makes it easy to use a Jena OntModel in a try-with-resources block. At the
+ * end of the block, the close() method will not close the model, but will
+ * merely release the lock.
+ * 
+ * Returned by the LockableOntModelSelector, or it can be wrapped around a bare
+ * OntModel. Cannot be used without locking.
+ * 
+ * <pre>
+ * try (LockedOntModel m = lockableOms.getDisplayModel.read()) {
+ *    ...
+ * }
+ * </pre>
+ * 
+ * or
+ * 
+ * <pre>
+ * try (LockedOntModel m = new LockableOntModel(ontModel).read()) {
+ *    ...
+ * }
+ * </pre>
+ */
+public class LockableOntModel {
+	private final OntModel ontModel;
+
+	public LockableOntModel(OntModel ontModel) {
+		this.ontModel = Objects.requireNonNull(ontModel,
+				"ontModel may not be null.");
+	}
+
+	public LockedOntModel read() {
+		ontModel.enterCriticalSection(Lock.READ);
+		return new LockedOntModel(ontModel);
+	}
+
+	public LockedOntModel write() {
+		ontModel.enterCriticalSection(Lock.WRITE);
+		return new LockedOntModel(ontModel);
+	}
+}

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/criticalsection/LockableOntModelSelector.java

@@ -0,0 +1,53 @@
+/* $This file is distributed under the terms of the license in /doc/license.txt$ */
+
+package edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection;
+
+import java.util.Objects;
+
+import edu.cornell.mannlib.vitro.webapp.dao.jena.OntModelSelector;
+
+/**
+ * Makes it easy to use a Jena OntModel with a try-with-resources block. If you
+ * have access to an OntModelSelector, you can wrap it and then use it obtain
+ * LockableOntModels.
+ * 
+ * <pre>
+ * LockableOntModelSelector lockableOms = new LockableOntModelSelector(oms);
+ *  
+ * try (LockedOntModel m = lockableOms.getDisplayModel.read()) {
+ *    ...
+ * }
+ * </pre>
+ */
+public class LockableOntModelSelector {
+	private final OntModelSelector oms;
+
+	public LockableOntModelSelector(OntModelSelector oms) {
+		this.oms = Objects.requireNonNull(oms, "oms may not be null.");
+	}
+
+	public LockableOntModel getFullModel() {
+		return new LockableOntModel(oms.getFullModel());
+	}
+
+	public LockableOntModel getABoxModel() {
+		return new LockableOntModel(oms.getABoxModel());
+	}
+
+	public LockableOntModel getTBoxModel() {
+		return new LockableOntModel(oms.getTBoxModel());
+	}
+
+	public LockableOntModel getApplicationMetadataModel() {
+		return new LockableOntModel(oms.getApplicationMetadataModel());
+	}
+
+	public LockableOntModel getUserAccountsModel() {
+		return new LockableOntModel(oms.getUserAccountsModel());
+	}
+
+	public LockableOntModel getDisplayModel() {
+		return new LockableOntModel(oms.getDisplayModel());
+	}
+
+}

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/criticalsection/LockedModel.java

@@ -0,0 +1,40 @@
+/* $This file is distributed under the terms of the license in /doc/license.txt$ */
+
+package edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection;
+
+import com.hp.hpl.jena.rdf.model.Model;
+
+import edu.cornell.mannlib.vitro.webapp.rdfservice.adapters.AbstractModelDecorator;
+
+/**
+ * A model that is easy to use in a try-with-resources code block. It can only
+ * be created by locking a LockableModel.
+ * 
+ * <pre>
+ * try (LockedModel m = lockableModel.read()) {
+ *    ...
+ * }
+ * </pre>
+ * 
+ * The close method has been hijacked to simply release the lock, and not to
+ * actually close the wrapped model.
+ */
+public class LockedModel extends AbstractModelDecorator implements
+		AutoCloseable {
+
+	/**
+	 * Should only be created by LockableModel.
+	 */
+	LockedModel(Model m) {
+		super(m);
+	}
+
+	/**
+	 * Just unlocks the model. Doesn't actually close it, because we may want to
+	 * use it again.
+	 */
+	@Override
+	public void close() {
+		super.leaveCriticalSection();
+	}
+}

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/jena/criticalsection/LockedOntModel.java

@@ -0,0 +1,32 @@
+/* $This file is distributed under the terms of the license in /doc/license.txt$ */
+
+package edu.cornell.mannlib.vitro.webapp.utils.jena.criticalsection;
+
+import com.hp.hpl.jena.ontology.OntModel;
+
+import edu.cornell.mannlib.vitro.webapp.rdfservice.adapters.AbstractOntModelDecorator;
+
+/**
+ * A simple OntModel, except that it can only be created by locking a
+ * LockableOntModel. It is AutoCloseable, but the close method has been hijacked
+ * to simply release the lock, and not to actually close the wrapped model.
+ */
+public class LockedOntModel extends AbstractOntModelDecorator implements
+		AutoCloseable {
+
+	/**
+	 * Can only be created by LockableOntModel.
+	 */
+	LockedOntModel(OntModel m) {
+		super(m);
+	}
+
+	/**
+	 * Just unlocks the model. Doesn't actually close it, because we may want to
+	 * use it again.
+	 */
+	@Override
+	public void close() {
+		super.leaveCriticalSection();
+	}
+}

webapp/test/edu/cornell/mannlib/vitro/webapp/utils/configuration/ConfigurationBeanLoaderTest.java

@@ -101,7 +101,7 @@ public class ConfigurationBeanLoaderTest extends AbstractTestClass {
 		expectException(NullPointerException.class, "model may not be null");
 
 		@SuppressWarnings("unused")
-		Object unused = new ConfigurationBeanLoader(null);
+		Object unused = new ConfigurationBeanLoader((Model) null);
 	}
 
 	// ----------------------------------------------------------------------