NIHVIVO-3467 Restructure SparqlQueryRunner to handle both Select and Construct queries.

webapp/src/edu/cornell/mannlib/vitro/webapp/controller/accounts/UserAccountsSelector.java

@@ -111,8 +111,8 @@ public class UserAccountsSelector {
 				.replace("%offset%", offset());
 		log.debug("main query: " + qString);
 
-		List<UserAccount> accounts = new SparqlQueryRunner<List<UserAccount>>(
+		List<UserAccount> accounts = new SparqlQueryRunner(model)
-				model, new MainQueryParser()).executeQuery(qString);
+				.executeSelect(new MainQueryParser(), qString);
 		log.debug("query returns: " + accounts);
 		return accounts;
 	}
@@ -126,8 +126,8 @@ public class UserAccountsSelector {
 				.replace("%filterClauses%", filterClauses());
 		log.debug("count query: " + qString);
 
-		int count = new SparqlQueryRunner<Integer>(model,
+		int count = new SparqlQueryRunner(model).executeSelect(
-				new CountQueryParser()).executeQuery(qString);
+				new CountQueryParser(), qString);
 		log.debug("result count: " + count);
 		return count;
 	}
@@ -139,8 +139,8 @@ public class UserAccountsSelector {
 					PREFIX_LINES).replace("%uri%", uri);
 			log.debug("permissions query: " + qString);
 
-			Set<String> permissions = new SparqlQueryRunner<Set<String>>(model,
+			Set<String> permissions = new SparqlQueryRunner(model)
-					new PermissionsQueryParser()).executeQuery(qString);
+					.executeSelect(new PermissionsQueryParser(), qString);
 			log.debug("permissions for '" + uri + "': " + permissions);
 			account.setPermissionSetUris(permissions);
 		}

webapp/src/edu/cornell/mannlib/vitro/webapp/controller/accounts/manageproxies/ProxyRelationshipSelector.java

@@ -94,8 +94,8 @@ public class ProxyRelationshipSelector {
 				PREFIX_LINES);
 		qString = replaceFilterClauses(qString);
 
-		int count = new SparqlQueryRunner<Integer>(context.userAccountsModel,
+		int count = new SparqlQueryRunner(context.userAccountsModel)
-				new CountQueryParser()).executeQuery(qString);
+				.executeSelect(new CountQueryParser(), qString);
 
 		log.debug("result count: " + count);
 		builder.count = count;
@@ -107,8 +107,8 @@ public class ProxyRelationshipSelector {
 			return q.replace("%filterClause%", "");
 		} else {
 			String clean = SparqlQueryUtils.escapeForRegex(searchTerm);
-			return q.replace("%filterClause%",
+			return q.replace("%filterClause%", "FILTER (REGEX(str(?label), '^"
-					"FILTER (REGEX(str(?label), '^" + clean + "', 'i'))");
+					+ clean + "', 'i'))");
 		}
 	}
 
@@ -136,9 +136,9 @@ public class ProxyRelationshipSelector {
 				.replace("%offset%", offset());
 		qString = replaceFilterClauses(qString);
 
-		List<Relationship> relationships = new SparqlQueryRunner<List<Relationship>>(
+		List<Relationship> relationships = new SparqlQueryRunner(
-				context.userAccountsModel, new ProxyBasicsParser())
+				context.userAccountsModel).executeSelect(
-				.executeQuery(qString);
+				new ProxyBasicsParser(), qString);
 		log.debug("getProxyBasics returns: " + relationships);
 		builder.relationships.addAll(relationships);
 	}
@@ -177,9 +177,8 @@ public class ProxyRelationshipSelector {
 						.replace("%matchingProperty%", context.matchingProperty)
 						.replace("%externalAuthId%", proxy.externalAuthId);
 
-				ItemInfo expansion = new SparqlQueryRunner<ItemInfo>(
+				ItemInfo expansion = new SparqlQueryRunner(context.unionModel)
-						context.unionModel, new ExpandProxyParser())
+						.executeSelect(new ExpandProxyParser(), qString);
-						.executeQuery(qString);
 				proxy.classLabel = expansion.classLabel;
 				proxy.imageUrl = expansion.imageUrl;
 			}
@@ -200,9 +199,9 @@ public class ProxyRelationshipSelector {
 				String qString = QUERY_RELATIONSHIPS.replace("%prefixes%",
 						PREFIX_LINES).replace("%proxyUri%", proxy.uri);
 
-				List<String> profileUris = new SparqlQueryRunner<List<String>>(
+				List<String> profileUris = new SparqlQueryRunner(
-						context.userAccountsModel, new RelationshipsParser())
+						context.userAccountsModel).executeSelect(
-						.executeQuery(qString);
+						new RelationshipsParser(), qString);
 
 				for (String profileUri : profileUris) {
 					r.profileInfos
@@ -236,9 +235,8 @@ public class ProxyRelationshipSelector {
 				String qString = QUERY_EXPAND_PROFILE.replace("%prefixes%",
 						PREFIX_LINES).replace("%profileUri%", profile.uri);
 
-				ItemInfo expansion = new SparqlQueryRunner<ItemInfo>(
+				ItemInfo expansion = new SparqlQueryRunner(context.unionModel)
-						context.unionModel, new ExpandProfileParser())
+						.executeSelect(new ExpandProfileParser(), qString);
-						.executeQuery(qString);
 				profile.label = expansion.label;
 				profile.classLabel = expansion.classLabel;
 				profile.imageUrl = expansion.imageUrl;

webapp/src/edu/cornell/mannlib/vitro/webapp/controller/accounts/manageproxies/ajax/BasicProfilesGetter.java

@@ -20,9 +20,6 @@ import com.hp.hpl.jena.query.QuerySolution;
 import edu.cornell.mannlib.vitro.webapp.config.ConfigurationProperties;
 import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
 import edu.cornell.mannlib.vitro.webapp.controller.ajax.AbstractAjaxResponder;
-import edu.cornell.mannlib.vitro.webapp.controller.freemarker.UrlBuilder;
-import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
-import edu.cornell.mannlib.vitro.webapp.utils.ImageUtil;
 import edu.cornell.mannlib.vitro.webapp.utils.SparqlQueryRunner;
 import edu.cornell.mannlib.vitro.webapp.utils.SparqlQueryUtils;
 
@@ -50,7 +47,6 @@ public class BasicProfilesGetter extends AbstractAjaxResponder {
 
 	private final String term;
 	private final OntModel fullModel;
-	private final String placeholderImageUrl;
 
 	public BasicProfilesGetter(HttpServlet servlet, VitroRequest vreq,
 			HttpServletResponse resp) {
@@ -58,9 +54,6 @@ public class BasicProfilesGetter extends AbstractAjaxResponder {
 		fullModel = vreq.getJenaOntModel();
 
 		term = getStringParameter(PARAMETER_SEARCH_TERM, "");
-
-		placeholderImageUrl = UrlBuilder.getUrl(ImageUtil
-				.getPlaceholderImagePathForType(VitroVocabulary.USERACCOUNT));
 	}
 
 	@Override
@@ -73,8 +66,8 @@ public class BasicProfilesGetter extends AbstractAjaxResponder {
 			String queryStr = QUERY_BASIC_PROFILES.replace("%typesUnion%",
 					buildTypeClause()).replace("%term%", cleanTerm);
 
-			JSONArray jsonArray = new SparqlQueryRunner<JSONArray>(fullModel,
+			JSONArray jsonArray = new SparqlQueryRunner(fullModel)
-					new BasicProfileInfoParser()).executeQuery(queryStr);
+					.executeSelect(new BasicProfileInfoParser(), queryStr);
 
 			String response = jsonArray.toString();
 			log.debug(response);
@@ -95,7 +88,6 @@ public class BasicProfilesGetter extends AbstractAjaxResponder {
 		return typeClause;
 	}
 
-
 	/** Parse a query row into a map of keys and values. */
 	private static class BasicProfileInfoParser extends JsonArrayParser {
 		@Override

webapp/src/edu/cornell/mannlib/vitro/webapp/controller/accounts/manageproxies/ajax/BasicProxiesGetter.java

@@ -77,9 +77,10 @@ public class BasicProxiesGetter extends AbstractAjaxResponder {
 			String cleanTerm = SparqlQueryUtils.escapeForRegex(term);
 			String queryStr = QUERY_BASIC_PROXIES.replace("%term%", cleanTerm);
 
-			JSONArray jsonArray = new SparqlQueryRunner<JSONArray>(
+			JSONArray jsonArray = new SparqlQueryRunner(userAccountsModel)
-					userAccountsModel, new BasicProxyInfoParser(
+					.executeSelect(
-							placeholderImageUrl)).executeQuery(queryStr);
+							new BasicProxyInfoParser(placeholderImageUrl),
+							queryStr);
 
 			String response = jsonArray.toString();
 			log.debug(response);

webapp/src/edu/cornell/mannlib/vitro/webapp/utils/SparqlQueryRunner.java

@@ -14,43 +14,50 @@ import com.hp.hpl.jena.query.QuerySolution;
 import com.hp.hpl.jena.query.ResultSet;
 import com.hp.hpl.jena.query.Syntax;
 import com.hp.hpl.jena.rdf.model.Literal;
+import com.hp.hpl.jena.rdf.model.Model;
+import com.hp.hpl.jena.rdf.model.ModelFactory;
 
 /**
- * Execute a SPARQL query.
+ * Execute SPARQL queries against a model.
  * 
- * Take the model and a parser in the constructor. Then execute as many queries
+ * Take the model in the constructor. Then execute as many queries as desired,
- * as desired, with the query contained in a String.
+ * with the query contained in a String. Exceptions are handled in a tidy
- * 
+ * manner, and the query environment is closed properly in any case.
- * If there is an exception while parsing the query, executing the query, or
- * parsing the results, log the exception and return the parser's default value.
- * The query enbvironment is closed properly in any case.
  */
-public class SparqlQueryRunner<T> {
+public class SparqlQueryRunner {
 	private static final Log log = LogFactory.getLog(SparqlQueryRunner.class);
 
 	private static final Syntax SYNTAX = Syntax.syntaxARQ;
 
 	private final OntModel model;
-	private final QueryParser<T> parser;
 
-	public SparqlQueryRunner(OntModel model, QueryParser<T> parser) {
+	public SparqlQueryRunner(OntModel model) {
+		if (model == null) {
+			throw new NullPointerException("model may not be null.");
+		}
 		this.model = model;
-		this.parser = parser;
 	}
 
 	/**
-	 * Execute the query and parse the results, closing and cleaning up
+	 * Execute the SELECT query and parse the results, closing and cleaning up
 	 * afterward. If an exception occurs, return the parser's default value.
 	 */
-	public T executeQuery(String queryStr) {
+	public <T> T executeSelect(QueryParser<T> parser, String queryStr) {
-		log.debug("query is: '" + queryStr + "'");
+		if (parser == null) {
+			throw new NullPointerException("parser may not be null.");
+		}
+		if (queryStr == null) {
+			throw new NullPointerException("queryStr may not be null.");
+		}
+
+		log.debug("select query is: '" + queryStr + "'");
 		QueryExecution qe = null;
 		try {
 			Query query = QueryFactory.create(queryStr, SYNTAX);
 			qe = QueryExecutionFactory.create(query, model);
 			return parser.parseResults(queryStr, qe.execSelect());
 		} catch (Exception e) {
-			log.error("Failed to execute the query: " + queryStr, e);
+			log.error("Failed to execute the Select query: " + queryStr, e);
 			return parser.defaultValue();
 		} finally {
 			if (qe != null) {
@@ -59,6 +66,27 @@ public class SparqlQueryRunner<T> {
 		}
 	}
 
+	/**
+	 * Execute the CONSTRUCT query and return the resulting model. If an
+	 * exception occurs, return an empty model.
+	 */
+	public Model executeConstruct(String queryStr) {
+		log.debug("construct query is: '" + queryStr + "'");
+		QueryExecution qe = null;
+		try {
+			Query query = QueryFactory.create(queryStr, SYNTAX);
+			qe = QueryExecutionFactory.create(query, model);
+			return qe.execConstruct();
+		} catch (Exception e) {
+			log.error("Failed to execute the Construct query: " + queryStr, e);
+			return ModelFactory.createDefaultModel();
+		} finally {
+			if (qe != null) {
+				qe.close();
+			}
+		}
+	}
+
 	/**
 	 * This template class provides some parsing methods to help in the
 	 * parseResults() method.