Removing some unused code and logging individual count in IndividualDaoSDB.java
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1 changed files with 1 additions and 56 deletions
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@ -336,63 +336,8 @@ public class IndividualDaoSDB extends IndividualDaoJena {
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w.close();
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}
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// getOntModel().enterCriticalSection(Lock.READ);
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// try {
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// ClosableIterator allIndIt = getOntModel().listIndividuals();
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// try {
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// while (allIndIt.hasNext()) {
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// com.hp.hpl.jena.ontology.Individual ind = (com.hp.hpl.jena.ontology.Individual) allIndIt.next();
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//
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//
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//
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// //don't include anything that lacks a label, issue VIVO-119.
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// if( getLabel(ind) == null )
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// continue;
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//
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//
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// boolean userVisible = true;
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// //Check for non-user visible types, maybe this should be an annotation?
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// ClosableIterator typeIt = ind.listRDFTypes(false);
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// try {
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// while (typeIt.hasNext()) {
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// Resource typeRes = (Resource) typeIt.next();
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// String type = typeRes.getURI();
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// // brute forcing this until we implement a better strategy
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// if (VitroVocabulary.PORTAL.equals(type) ||
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// VitroVocabulary.TAB.equals(type) ||
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// VitroVocabulary.TAB_INDIVIDUALRELATION.equals(type) ||
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// VitroVocabulary.LINK.equals(type) ||
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// VitroVocabulary.KEYWORD.equals(type) ||
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// VitroVocabulary.KEYWORD_INDIVIDUALRELATION.equals(type) ||
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// VitroVocabulary.CLASSGROUP.equals(type) ||
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// VitroVocabulary.PROPERTYGROUP.equals(type) ||
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// VitroVocabulary.APPLICATION.equals(type)) {
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// userVisible = false;
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// break;
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// }
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// if( OWL.ObjectProperty.getURI().equals(type) ||
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// OWL.DatatypeProperty.getURI().equals(type) ||
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// OWL.AnnotationProperty.getURI().equals(type) ||
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// RDF.type.getURI().equals(type) ){
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// userVisible = false;
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// break;
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// }
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// }
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// } finally {
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// typeIt.close();
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// }
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// if (userVisible) {
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// list.add(ind);
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// }
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//
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// }
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// } finally {
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// allIndIt.close();
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// }
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// } finally {
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// getOntModel().leaveCriticalSection();
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// }
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if (list.size() >0){
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log.info("Number of individuals from source: " + list.size());
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return new Iterator(){
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Iterator<String> innerIt = list.iterator();
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public boolean hasNext() {
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