NIHVIVO-3542 Remove old IndividualController.
This commit is contained in:
j2blake
parent
fdee610e22
commit
bf61f9a168
2 changed files with 0 additions and 1333 deletions
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/* $This file is distributed under the terms of the license in /doc/license.txt$ */
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package edu.cornell.mannlib.vitro.webapp.controller.freemarker;
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import java.io.IOException;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.regex.Matcher;
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import java.util.regex.Pattern;
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import javax.servlet.ServletException;
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import javax.servlet.http.HttpServletRequest;
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import javax.servlet.http.HttpServletResponse;
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import org.apache.commons.logging.Log;
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import org.apache.commons.logging.LogFactory;
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import com.hp.hpl.jena.datatypes.TypeMapper;
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import com.hp.hpl.jena.datatypes.xsd.XSDDatatype;
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import com.hp.hpl.jena.ontology.OntModel;
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import com.hp.hpl.jena.rdf.model.Literal;
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import com.hp.hpl.jena.rdf.model.Model;
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import com.hp.hpl.jena.rdf.model.ModelFactory;
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import com.hp.hpl.jena.rdf.model.Property;
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import com.hp.hpl.jena.rdf.model.RDFNode;
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import com.hp.hpl.jena.rdf.model.Resource;
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import com.hp.hpl.jena.rdf.model.ResourceFactory;
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import com.hp.hpl.jena.rdf.model.Statement;
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import com.hp.hpl.jena.rdf.model.StmtIterator;
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import com.hp.hpl.jena.shared.Lock;
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import com.hp.hpl.jena.vocabulary.RDF;
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import com.hp.hpl.jena.vocabulary.RDFS;
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import edu.cornell.mannlib.vitro.webapp.auth.permissions.SimplePermission;
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import edu.cornell.mannlib.vitro.webapp.auth.policy.PolicyHelper;
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import edu.cornell.mannlib.vitro.webapp.beans.DataPropertyStatement;
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import edu.cornell.mannlib.vitro.webapp.beans.Individual;
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import edu.cornell.mannlib.vitro.webapp.beans.ObjectProperty;
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import edu.cornell.mannlib.vitro.webapp.beans.ObjectPropertyStatement;
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import edu.cornell.mannlib.vitro.webapp.beans.SelfEditingConfiguration;
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import edu.cornell.mannlib.vitro.webapp.beans.VClass;
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import edu.cornell.mannlib.vitro.webapp.config.ConfigurationProperties;
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import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
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import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ExceptionResponseValues;
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import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.RdfResponseValues;
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import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.RedirectResponseValues;
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import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ResponseValues;
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import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.TemplateResponseValues;
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import edu.cornell.mannlib.vitro.webapp.dao.DisplayVocabulary;
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import edu.cornell.mannlib.vitro.webapp.dao.IndividualDao;
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import edu.cornell.mannlib.vitro.webapp.dao.ObjectPropertyDao;
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import edu.cornell.mannlib.vitro.webapp.dao.VClassDao;
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import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
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import edu.cornell.mannlib.vitro.webapp.filestorage.model.FileInfo;
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import edu.cornell.mannlib.vitro.webapp.reasoner.SimpleReasoner;
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import edu.cornell.mannlib.vitro.webapp.utils.NamespaceMapper;
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import edu.cornell.mannlib.vitro.webapp.utils.NamespaceMapperFactory;
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import edu.cornell.mannlib.vitro.webapp.utils.jena.ExtendedLinkedDataUtils;
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import edu.cornell.mannlib.vitro.webapp.utils.jena.JenaOutputUtils;
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import edu.cornell.mannlib.vitro.webapp.web.ContentType;
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import edu.cornell.mannlib.vitro.webapp.web.beanswrappers.ReadOnlyBeansWrapper;
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import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.IndividualTemplateModel;
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import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist.ListedIndividual;
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/**
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* Handles requests for entity information.
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* Calls EntityPropertyListController to draw property list.
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*
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* @author bdc34
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*
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*/
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public class IndividualController extends FreemarkerHttpServlet {
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private static final long serialVersionUID = 1L;
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private static final Log log = LogFactory.getLog(IndividualController.class);
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private static final String RICH_EXPORT_ROOT = "/WEB-INF/rich-export/";
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private static final String PERSON_CLASS_URI = "http://xmlns.com/foaf/0.1/Person";
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private static final String INCLUDE_ALL = "all";
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@SuppressWarnings("serial")
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private static final Map<String, String> namespaces = new HashMap<String, String>() {{
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put("display", VitroVocabulary.DISPLAY);
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put("vitro", VitroVocabulary.vitroURI);
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put("vitroPublic", VitroVocabulary.VITRO_PUBLIC);
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}};
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private static final Property extendedLinkedDataProperty = ResourceFactory.createProperty(namespaces.get("vitro") + "extendedLinkedData");
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private static final Literal xsdTrue = ResourceFactory.createTypedLiteral("true", XSDDatatype.XSDboolean);
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private static final String TEMPLATE_INDIVIDUAL_DEFAULT = "individual.ftl";
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private static final String TEMPLATE_HELP = "individual-help.ftl";
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private static Map<String,Float>qsMap;
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@Override
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protected ResponseValues processRequest(VitroRequest vreq) {
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try {
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cleanUpSession(vreq);
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// get URL without hostname or servlet context
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String url = vreq.getRequestURI().substring(vreq.getContextPath().length());
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// Check to see if the request is for a non-information resource, redirect if it is.
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String redirectURL = checkForRedirect ( url, vreq );
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if( redirectURL != null ){
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return new RedirectResponseValues(redirectURL, HttpServletResponse.SC_SEE_OTHER);
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}
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Individual individual = null;
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try {
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individual = getIndividualFromRequest(vreq);
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} catch (Throwable th) {
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return doHelp();
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}
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if( individual == null ){
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return doNotFound(vreq);
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}
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ContentType rdfFormat = checkUrlForLinkedDataRequest(url, vreq);
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if( rdfFormat != null ){
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return doRdf(vreq, individual, rdfFormat);
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}
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// If this is an uploaded file, redirect to its "alias URL".
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String aliasUrl = getAliasUrlForBytestreamIndividual(vreq, individual);
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if (aliasUrl != null) {
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return new RedirectResponseValues(aliasUrl, HttpServletResponse.SC_SEE_OTHER);
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}
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Map<String, Object> body = new HashMap<String, Object>();
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body.put("title", individual.getName());
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body.put("relatedSubject", getRelatedSubject(vreq));
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body.put("namespaces", namespaces);
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body.put("temporalVisualizationEnabled", getTemporalVisualizationFlag());
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body.put("verbosePropertySwitch", getVerbosePropertyValues(vreq));
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IndividualTemplateModel itm = getIndividualTemplateModel(individual, vreq);
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/* We need to expose non-getters in displaying the individual's property list,
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* since it requires calls to methods with parameters.
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* This is still safe, because we are only putting BaseTemplateModel objects
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* into the data model: no real data can be modified.
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*/
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// body.put("individual", wrap(itm, BeansWrapper.EXPOSE_SAFE));
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body.put("individual", wrap(itm, new ReadOnlyBeansWrapper()));
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body.put("headContent", getRdfLinkTag(itm));
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//If special values required for individuals like menu, include values in template values
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body.putAll(getSpecialEditingValues(vreq));
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String template = getIndividualTemplate(individual, vreq);
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return new TemplateResponseValues(template, body);
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} catch (Throwable e) {
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log.error(e, e);
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return new ExceptionResponseValues(e);
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}
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}
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private void cleanUpSession(VitroRequest vreq) {
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// We should not remove edit configurations from the session because the user
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// may resubmit the forms via the back button and the system is setup to handle this.
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}
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private Map<String, Object> getVerbosePropertyValues(VitroRequest vreq) {
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Map<String, Object> map = null;
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if (PolicyHelper.isAuthorizedForActions(vreq, SimplePermission.SEE_VERBOSE_PROPERTY_INFORMATION.ACTIONS)) {
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// Get current verbose property display value
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String verbose = vreq.getParameter("verbose");
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Boolean verboseValue;
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// If the form was submitted, get that value
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if (verbose != null) {
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verboseValue = "true".equals(verbose);
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// If form not submitted, get the session value
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} else {
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Boolean verbosePropertyDisplayValueInSession = (Boolean) vreq.getSession().getAttribute("verbosePropertyDisplay");
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// True if session value is true, otherwise (session value is false or null) false
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verboseValue = Boolean.TRUE.equals(verbosePropertyDisplayValueInSession);
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}
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vreq.getSession().setAttribute("verbosePropertyDisplay", verboseValue);
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map = new HashMap<String, Object>();
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map.put("currentValue", verboseValue);
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/* Factors contributing to switching from a form to an anchor element:
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- Can't use GET with a query string on the action unless there is no form data, since
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the form data is appended to the action with a "?", so there can't already be a query string
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on it.
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- The browser (at least Firefox) does not submit a form that has no form data.
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- Some browsers might strip the query string off the form action of a POST - though
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probably they shouldn't, because the HTML spec allows a full URI as a form action.
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- Given these three, the only reliable solution is to dynamically create hidden inputs
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for the query parameters.
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- Much simpler is to just create an anchor element. This has the added advantage that the
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browser doesn't ask to resend the form data when reloading the page.
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*/
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String url = vreq.getRequestURI() + "?verbose=" + !verboseValue;
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// Append request query string, except for current verbose value, to url
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String queryString = vreq.getQueryString();
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if (queryString != null) {
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String[] params = queryString.split("&");
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for (String param : params) {
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if (! param.startsWith("verbose=")) {
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url += "&" + param;
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}
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}
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}
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map.put("url", url);
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} else {
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vreq.getSession().setAttribute("verbosePropertyDisplay", false);
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}
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return map;
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}
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//Get special values for cases such as Menu Management editing
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private Map<String, Object> getSpecialEditingValues(VitroRequest vreq) {
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Map<String, Object> map = new HashMap<String, Object>();
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if(vreq.getAttribute(VitroRequest.SPECIAL_WRITE_MODEL) != null) {
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map.put("reorderUrl", UrlBuilder.getUrl(DisplayVocabulary.REORDER_MENU_URL));
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}
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return map;
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}
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private Map<String, Object> getRelatedSubject(VitroRequest vreq) {
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Map<String, Object> map = null;
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IndividualDao iwDao = vreq.getWebappDaoFactory().getIndividualDao();
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ObjectPropertyDao opDao = vreq.getWebappDaoFactory().getObjectPropertyDao();
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// Check if a "relatedSubjectUri" parameter has been supplied, and,
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// if so, retrieve the related individual.
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// Some individuals make little sense standing alone and should
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// be displayed in the context of their relationship to another.
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String relatedSubjectUri = vreq.getParameter("relatedSubjectUri");
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if (relatedSubjectUri != null) {
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Individual relatedSubjectInd = iwDao.getIndividualByURI(relatedSubjectUri);
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if (relatedSubjectInd != null) {
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map = new HashMap<String, Object>();
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map.put("name", relatedSubjectInd.getName());
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map.put("url", UrlBuilder.getIndividualProfileUrl(relatedSubjectInd, vreq));
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map.put("url", (new ListedIndividual(relatedSubjectInd, vreq)).getProfileUrl());
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String relatingPredicateUri = vreq.getParameter("relatingPredicateUri");
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if (relatingPredicateUri != null) {
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ObjectProperty relatingPredicateProp = opDao.getObjectPropertyByURI(relatingPredicateUri);
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if (relatingPredicateProp != null) {
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map.put("relatingPredicateDomainPublic", relatingPredicateProp.getDomainPublic());
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}
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}
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}
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}
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return map;
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}
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private String getRdfLinkTag(IndividualTemplateModel itm) {
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String linkTag = null;
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String linkedDataUrl = itm.getRdfUrl();
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if (linkedDataUrl != null) {
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linkTag = "<link rel=\"alternate\" type=\"application/rdf+xml\" href=\"" +
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linkedDataUrl + "\" /> ";
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}
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return linkTag;
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}
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private IndividualTemplateModel getIndividualTemplateModel(Individual individual, VitroRequest vreq)
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throws ServletException, IOException {
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individual.sortForDisplay();
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return new IndividualTemplateModel(individual, vreq);
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}
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// Determine whether the individual has a custom display template based on its class membership.
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// If not, return the default individual template.
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private String getIndividualTemplate(Individual individual, VitroRequest vreq) {
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@SuppressWarnings("unused")
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String vclassName = "unknown";
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String customTemplate = null;
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// First check vclass
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if( individual.getVClass() != null ){
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vclassName = individual.getVClass().getName();
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List<VClass> directClasses = individual.getVClasses(true);
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for (VClass vclass : directClasses) {
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customTemplate = vclass.getCustomDisplayView();
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if (customTemplate != null) {
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if (customTemplate.length()>0) {
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vclassName = vclass.getName(); // reset entity vclassname to name of class where a custom view; this call has side-effects
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log.debug("Found direct class [" + vclass.getName() + "] with custom view " + customTemplate + "; resetting entity vclassName to this class");
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break;
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} else {
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customTemplate = null;
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}
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}
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}
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// If no custom template defined, check other vclasses
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if (customTemplate == null) {
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List<VClass> inferredClasses = individual.getVClasses(false);
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for (VClass vclass : inferredClasses) {
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customTemplate = vclass.getCustomDisplayView();
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if (customTemplate != null) {
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if (customTemplate.length()>0) {
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// note that NOT changing entity vclassName here yet
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log.debug("Found inferred class [" + vclass.getName() + "] with custom view " + customTemplate);
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break;
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} else {
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customTemplate = null;
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}
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}
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}
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}
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// If still no custom template defined, and inferencing is asynchronous (under RDB), check
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// the superclasses of the vclass for a custom template specification.
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SimpleReasoner simpleReasoner = (SimpleReasoner) getServletContext().getAttribute(SimpleReasoner.class.getName());
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if (customTemplate == null && simpleReasoner != null && simpleReasoner.isABoxReasoningAsynchronous()) {
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log.debug("Checking superclasses for custom template specification because ABox reasoning is asynchronous");
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for (VClass directVClass : directClasses) {
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VClassDao vcDao = vreq.getWebappDaoFactory().getVClassDao();
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List<String> superClassUris = vcDao.getAllSuperClassURIs(directVClass.getURI());
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for (String uri : superClassUris) {
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VClass vclass = vcDao.getVClassByURI(uri);
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customTemplate = vclass.getCustomDisplayView();
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if (customTemplate != null) {
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if (customTemplate.length()>0) {
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// note that NOT changing entity vclassName here
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log.debug("Found superclass [" + vclass.getName() + "] with custom view " + customTemplate);
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break;
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} else {
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customTemplate = null;
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}
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}
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}
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}
|
|
||||||
}
|
|
||||||
} else if (individual.getVClassURI() != null) {
|
|
||||||
log.debug("Individual " + individual.getURI() + " with class URI " +
|
|
||||||
individual.getVClassURI() + ": no class found with that URI");
|
|
||||||
}
|
|
||||||
|
|
||||||
return customTemplate != null ? customTemplate : TEMPLATE_INDIVIDUAL_DEFAULT;
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
private ResponseValues doRdf(VitroRequest vreq, Individual individual,
|
|
||||||
ContentType rdfFormat) throws IOException, ServletException {
|
|
||||||
|
|
||||||
OntModel ontModel = vreq.getJenaOntModel();
|
|
||||||
|
|
||||||
String[] includes = vreq.getParameterValues("include");
|
|
||||||
Model newModel = getRDF(individual,ontModel,ModelFactory.createDefaultModel(),0,includes);
|
|
||||||
JenaOutputUtils.setNameSpacePrefixes(newModel, vreq.getWebappDaoFactory());
|
|
||||||
return new RdfResponseValues(rdfFormat, newModel);
|
|
||||||
}
|
|
||||||
|
|
||||||
private static Pattern LINKED_DATA_URL = Pattern.compile("^/individual/([^/]*)$");
|
|
||||||
private static Pattern NS_PREFIX_URL = Pattern.compile("^/individual/([^/]*)/([^/]*)$");
|
|
||||||
|
|
||||||
/**
|
|
||||||
Gets the entity id from the request.
|
|
||||||
Works for the following styles of URLs:
|
|
||||||
|
|
||||||
/individual?id=individualLocalName
|
|
||||||
/individual?entityId=individualLocalName
|
|
||||||
/individual?uri=urlencodedURI
|
|
||||||
/individual?nedit=bdc34
|
|
||||||
/individual?nedIt=bdc34
|
|
||||||
/individual/nsprefix/localname
|
|
||||||
/individual/localname
|
|
||||||
/individual/localname/localname.rdf
|
|
||||||
/individual/localname/localname.n3
|
|
||||||
/individual/localname/localname.ttl
|
|
||||||
/individual/localname/localname.html
|
|
||||||
|
|
||||||
@return null on failure.
|
|
||||||
*/
|
|
||||||
public static Individual getIndividualFromRequest(VitroRequest vreq) {
|
|
||||||
String netIdStr = null;
|
|
||||||
Individual entity = null;
|
|
||||||
IndividualDao iwDao = vreq.getWebappDaoFactory().getIndividualDao();
|
|
||||||
|
|
||||||
String entityIdStr = vreq.getParameter("id");
|
|
||||||
if (entityIdStr == null || entityIdStr.equals(""))
|
|
||||||
entityIdStr = vreq.getParameter("entityId");
|
|
||||||
|
|
||||||
if( entityIdStr != null){
|
|
||||||
try {
|
|
||||||
String entityURI = vreq.getWebappDaoFactory().getDefaultNamespace()+"individual"+entityIdStr;
|
|
||||||
entity = iwDao.getIndividualByURI(entityURI);
|
|
||||||
} catch ( Exception e ) {
|
|
||||||
log.warn("Could not parse entity id: " + entityIdStr);
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
return entity;
|
|
||||||
}
|
|
||||||
|
|
||||||
String entityURIStr = vreq.getParameter("uri");
|
|
||||||
if (entityURIStr != null) {
|
|
||||||
try {
|
|
||||||
entity = iwDao.getIndividualByURI(entityURIStr);
|
|
||||||
} catch (Exception e) {
|
|
||||||
log.warn("Could not retrieve entity "+entityURIStr);
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
return entity;
|
|
||||||
}
|
|
||||||
|
|
||||||
//get URL without hostname or servlet context
|
|
||||||
String url = vreq.getRequestURI().substring(vreq.getContextPath().length());
|
|
||||||
|
|
||||||
/* check for parts of URL that indicate request for RDF
|
|
||||||
http://vivo.cornell.edu/individual/n23/n23.rdf
|
|
||||||
http://vivo.cornell.edu/individual/n23/n23.n3
|
|
||||||
http://vivo.cornell.edu/individual/n23/n23.ttl */
|
|
||||||
String uri = null;
|
|
||||||
Matcher m = RDF_REQUEST.matcher(url);
|
|
||||||
if( m.matches() && m.groupCount() == 1)
|
|
||||||
uri = m.group(1);
|
|
||||||
m = N3_REQUEST.matcher(url);
|
|
||||||
if( m.matches() && m.groupCount() == 1)
|
|
||||||
uri = m.group(1);
|
|
||||||
m = TTL_REQUEST.matcher(url);
|
|
||||||
if( m.matches() && m.groupCount() == 1)
|
|
||||||
uri= m.group(1);
|
|
||||||
m = HTML_REQUEST.matcher(url);
|
|
||||||
if( m.matches() && m.groupCount() == 1)
|
|
||||||
uri= m.group(1);
|
|
||||||
if( uri != null )
|
|
||||||
return iwDao.getIndividualByURI(vreq.getWebappDaoFactory().getDefaultNamespace() + uri);
|
|
||||||
|
|
||||||
// see if we can get the URI from a name space prefix and a local name
|
|
||||||
Matcher prefix_match = NS_PREFIX_URL.matcher(url);
|
|
||||||
if( prefix_match.matches() && prefix_match.groupCount() == 2){
|
|
||||||
String prefix = prefix_match.group(1);
|
|
||||||
String localName = prefix_match.group(2);
|
|
||||||
|
|
||||||
//String[] requestParts = requestURI.split("/individual/");
|
|
||||||
//String[] URIParts = requestParts[1].split("/");
|
|
||||||
//String localName = URIParts[1];
|
|
||||||
|
|
||||||
String namespace = "";
|
|
||||||
NamespaceMapper namespaceMapper = NamespaceMapperFactory.getNamespaceMapper(vreq.getSession().getServletContext());
|
|
||||||
String t;
|
|
||||||
namespace = ( (t = namespaceMapper.getNamespaceForPrefix(prefix)) != null) ? t : "";
|
|
||||||
|
|
||||||
return iwDao.getIndividualByURI(namespace+localName);
|
|
||||||
}
|
|
||||||
|
|
||||||
// see if we can get a local name
|
|
||||||
Matcher linkedDataMatch = LINKED_DATA_URL.matcher(url);
|
|
||||||
if( linkedDataMatch.matches() && linkedDataMatch.groupCount() == 1){
|
|
||||||
String localName = linkedDataMatch.group(1);
|
|
||||||
String ns = vreq.getWebappDaoFactory().getDefaultNamespace();
|
|
||||||
return iwDao.getIndividualByURI( ns + localName );
|
|
||||||
}
|
|
||||||
|
|
||||||
//so we try to get the netid
|
|
||||||
netIdStr = vreq.getParameter("netId");
|
|
||||||
if (netIdStr==null || netIdStr.equals(""))
|
|
||||||
netIdStr = vreq.getParameter("netid");
|
|
||||||
if ( netIdStr != null ){
|
|
||||||
SelfEditingConfiguration sec = SelfEditingConfiguration.getBean(vreq);
|
|
||||||
List<Individual> assocInds = sec.getAssociatedIndividuals(iwDao, netIdStr);
|
|
||||||
if (!assocInds.isEmpty()) {
|
|
||||||
return assocInds.get(0);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
|
||||||
* Following recipe 3 from "Best Practice Recipes for Publishing RDF Vocabularies."
|
|
||||||
* See http://www.w3.org/TR/swbp-vocab-pub/#recipe3.
|
|
||||||
* The basic idea is that a URI like http://vivo.cornell.edu/individual/n1234
|
|
||||||
* identifies a real world individual. HTTP cannot send that as the response
|
|
||||||
* to a GET request because it can only send bytes and not things. The server
|
|
||||||
* sends a 303, to mean "you asked for something I cannot send you, but I can
|
|
||||||
* send you this other stream of bytes about that thing."
|
|
||||||
* In the case of a request like http://vivo.cornell.edu/individual/n1234/n1234.rdf
|
|
||||||
* or http://vivo.cornell.edu/individual/n1234?format=rdfxml,
|
|
||||||
* the request is for a set of bytes rather than an individual, so no 303 is needed.
|
|
||||||
*/
|
|
||||||
private static Pattern URI_PATTERN = Pattern.compile("^/individual/([^/]*)$");
|
|
||||||
private String checkForRedirect(String url, VitroRequest vreq) {
|
|
||||||
|
|
||||||
String formatParam = (String) vreq.getParameter("format");
|
|
||||||
if ( formatParam == null ) {
|
|
||||||
Matcher m = URI_PATTERN.matcher(url);
|
|
||||||
if ( m.matches() && m.groupCount() == 1 ) {
|
|
||||||
ContentType c = checkAcceptHeaderForLinkedDataRequest(url, vreq);
|
|
||||||
if ( c != null ) {
|
|
||||||
String redirectUrl = "/individual/" + m.group(1) + "/" + m.group(1) ;
|
|
||||||
if ( RDFXML_MIMETYPE.equals( c.getMediaType() ) ) {
|
|
||||||
return redirectUrl + ".rdf";
|
|
||||||
} else if ( N3_MIMETYPE.equals( c.getMediaType() ) ) {
|
|
||||||
return redirectUrl + ".n3";
|
|
||||||
} else if ( TTL_MIMETYPE.equals( c.getMediaType() ) ) {
|
|
||||||
return redirectUrl + ".ttl";
|
|
||||||
}//else send them to html
|
|
||||||
}
|
|
||||||
//else redirect to HTML representation
|
|
||||||
return "display/" + m.group(1);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
protected ContentType checkAcceptHeaderForLinkedDataRequest(String url, VitroRequest vreq) {
|
|
||||||
try {
|
|
||||||
/*
|
|
||||||
* Check the accept header. This request will trigger a
|
|
||||||
* redirect with a 303 ("see also"), because the request is for
|
|
||||||
* an individual but the server can only provide a set of bytes.
|
|
||||||
*/
|
|
||||||
String acceptHeader = vreq.getHeader("accept");
|
|
||||||
if (acceptHeader != null) {
|
|
||||||
String ctStr = ContentType.getBestContentType(
|
|
||||||
ContentType.getTypesAndQ(acceptHeader),
|
|
||||||
getAcceptedContentTypes());
|
|
||||||
|
|
||||||
if (ctStr!=null && (
|
|
||||||
RDFXML_MIMETYPE.equals(ctStr) ||
|
|
||||||
N3_MIMETYPE.equals(ctStr) ||
|
|
||||||
TTL_MIMETYPE.equals(ctStr) ))
|
|
||||||
return new ContentType(ctStr);
|
|
||||||
}
|
|
||||||
} catch (Throwable th) {
|
|
||||||
log.error("Problem while checking accept header " , th);
|
|
||||||
}
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
public static final Pattern RDFXML_FORMAT = Pattern.compile("rdfxml");
|
|
||||||
public static final Pattern N3_FORMAT = Pattern.compile("n3");
|
|
||||||
public static final Pattern TTL_FORMAT = Pattern.compile("ttl");
|
|
||||||
|
|
||||||
private static Pattern RDF_REQUEST = Pattern.compile("^/individual/([^/]*)/\\1.rdf$");
|
|
||||||
private static Pattern N3_REQUEST = Pattern.compile("^/individual/([^/]*)/\\1.n3$");
|
|
||||||
private static Pattern TTL_REQUEST = Pattern.compile("^/individual/([^/]*)/\\1.ttl$");
|
|
||||||
private static Pattern HTML_REQUEST = Pattern.compile("^/display/([^/]*)$");
|
|
||||||
|
|
||||||
/**
|
|
||||||
* @return null if this is not a linked data request, returns content type if it is a
|
|
||||||
* linked data request.
|
|
||||||
* These are Vitro-specific ways of requesting rdf, unrelated to semantic web standards.
|
|
||||||
* They do not trigger a redirect with a 303, because the request is for a set of bytes
|
|
||||||
* rather than an individual.
|
|
||||||
*/
|
|
||||||
protected ContentType checkUrlForLinkedDataRequest(String url, VitroRequest vreq ) {
|
|
||||||
|
|
||||||
Matcher m;
|
|
||||||
|
|
||||||
/*
|
|
||||||
* Check for url param specifying format.
|
|
||||||
* Example: http://vivo.cornell.edu/individual/n23?format=rdfxml
|
|
||||||
*/
|
|
||||||
String formatParam = (String) vreq.getParameter("format");
|
|
||||||
if (formatParam != null) {
|
|
||||||
m = RDFXML_FORMAT.matcher(formatParam);
|
|
||||||
if ( m.matches() ) {
|
|
||||||
return ContentType.RDFXML;
|
|
||||||
}
|
|
||||||
m = N3_FORMAT.matcher(formatParam);
|
|
||||||
if( m.matches() ) {
|
|
||||||
return ContentType.N3;
|
|
||||||
}
|
|
||||||
m = TTL_FORMAT.matcher(formatParam);
|
|
||||||
if( m.matches() ) {
|
|
||||||
return ContentType.TURTLE;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
/*
|
|
||||||
* Check for parts of URL that indicate request for RDF. Examples:
|
|
||||||
* http://vivo.cornell.edu/individual/n23/n23.rdf
|
|
||||||
* http://vivo.cornell.edu/individual/n23/n23.n3
|
|
||||||
* http://vivo.cornell.edu/individual/n23/n23.ttl
|
|
||||||
*/
|
|
||||||
m = RDF_REQUEST.matcher(url);
|
|
||||||
if( m.matches() ) {
|
|
||||||
return ContentType.RDFXML;
|
|
||||||
}
|
|
||||||
m = N3_REQUEST.matcher(url);
|
|
||||||
if( m.matches() ) {
|
|
||||||
return ContentType.N3;
|
|
||||||
}
|
|
||||||
m = TTL_REQUEST.matcher(url);
|
|
||||||
if( m.matches() ) {
|
|
||||||
return ContentType.TURTLE;
|
|
||||||
}
|
|
||||||
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
/**
|
|
||||||
* If this entity represents a File Bytestream, get its alias URL so we can
|
|
||||||
* properly serve the file contents.
|
|
||||||
*/
|
|
||||||
private String getAliasUrlForBytestreamIndividual(VitroRequest vreq, Individual entity)
|
|
||||||
throws IOException {
|
|
||||||
FileInfo fileInfo = FileInfo.instanceFromBytestreamUri(vreq.getWebappDaoFactory(), entity.getURI());
|
|
||||||
if (fileInfo == null) {
|
|
||||||
log.trace("Entity '" + entity.getURI() + "' is not a bytestream.");
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
String url = fileInfo.getBytestreamAliasUrl();
|
|
||||||
log.debug("Alias URL for '" + entity.getURI() + "' is '" + url + "'");
|
|
||||||
|
|
||||||
if (entity.getURI().equals(url)) {
|
|
||||||
// Avoid a tight loop; if the alias URL is equal to the URI, then
|
|
||||||
// don't recognize it as a File Bytestream.
|
|
||||||
return null;
|
|
||||||
} else {
|
|
||||||
return url;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
private boolean getTemporalVisualizationFlag() {
|
|
||||||
String property = ConfigurationProperties.getBean(getServletContext())
|
|
||||||
.getProperty("visualization.temporal");
|
|
||||||
return "enabled".equals(property);
|
|
||||||
}
|
|
||||||
|
|
||||||
private Model getRDF(Individual entity, OntModel contextModel, Model newModel, int recurseDepth, String[] includes) {
|
|
||||||
|
|
||||||
Resource subj = newModel.getResource(entity.getURI());
|
|
||||||
|
|
||||||
List<DataPropertyStatement> dstates = entity.getDataPropertyStatements();
|
|
||||||
TypeMapper typeMapper = TypeMapper.getInstance();
|
|
||||||
for (DataPropertyStatement ds: dstates) {
|
|
||||||
Property dp = newModel.getProperty(ds.getDatapropURI());
|
|
||||||
Literal lit = null;
|
|
||||||
if ((ds.getLanguage()) != null && (ds.getLanguage().length()>0)) {
|
|
||||||
lit = newModel.createLiteral(ds.getData(),ds.getLanguage());
|
|
||||||
} else if ((ds.getDatatypeURI() != null) && (ds.getDatatypeURI().length()>0)) {
|
|
||||||
lit = newModel.createTypedLiteral(ds.getData(),typeMapper.getSafeTypeByName(ds.getDatatypeURI()));
|
|
||||||
} else {
|
|
||||||
lit = newModel.createLiteral(ds.getData());
|
|
||||||
}
|
|
||||||
newModel.add(newModel.createStatement(subj, dp, lit));
|
|
||||||
}
|
|
||||||
|
|
||||||
if (recurseDepth < 5) {
|
|
||||||
List<ObjectPropertyStatement> ostates = entity.getObjectPropertyStatements();
|
|
||||||
|
|
||||||
for (ObjectPropertyStatement os: ostates) {
|
|
||||||
Property prop = newModel.getProperty(os.getPropertyURI());
|
|
||||||
Resource obj = newModel.getResource(os.getObjectURI());
|
|
||||||
newModel.add(newModel.createStatement(subj, prop, obj));
|
|
||||||
if ( includeInLinkedData(obj, contextModel)) {
|
|
||||||
newModel.add(getRDF(os.getObject(), contextModel, newModel, recurseDepth + 1, includes));
|
|
||||||
} else {
|
|
||||||
contextModel.enterCriticalSection(Lock.READ);
|
|
||||||
try {
|
|
||||||
newModel.add(contextModel.listStatements(obj, RDFS.label, (RDFNode)null));
|
|
||||||
} finally {
|
|
||||||
contextModel.leaveCriticalSection();
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
newModel = getLabelAndTypes(entity, contextModel, newModel );
|
|
||||||
|
|
||||||
// get all the statements not covered by the object property / datatype property code above
|
|
||||||
// note implication that extendedLinkedData individuals will only be evaluated for the
|
|
||||||
// recognized object properties.
|
|
||||||
contextModel.enterCriticalSection(Lock.READ);
|
|
||||||
try {
|
|
||||||
StmtIterator iter = contextModel.listStatements(subj, (Property) null, (RDFNode) null);
|
|
||||||
while (iter.hasNext()) {
|
|
||||||
Statement stmt = iter.next();
|
|
||||||
if (!newModel.contains(stmt)) {
|
|
||||||
newModel.add(stmt);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
} finally {
|
|
||||||
contextModel.leaveCriticalSection();
|
|
||||||
}
|
|
||||||
|
|
||||||
if (recurseDepth == 0 && includes != null && entity.isVClass(PERSON_CLASS_URI)) {
|
|
||||||
|
|
||||||
for (String include : includes) {
|
|
||||||
|
|
||||||
String rootDir = null;
|
|
||||||
if (INCLUDE_ALL.equals(include)) {
|
|
||||||
rootDir = RICH_EXPORT_ROOT;
|
|
||||||
} else {
|
|
||||||
rootDir = RICH_EXPORT_ROOT + include + "/";
|
|
||||||
}
|
|
||||||
|
|
||||||
long start = System.currentTimeMillis();
|
|
||||||
Model extendedModel = ExtendedLinkedDataUtils.createModelFromQueries(getServletContext(), rootDir, contextModel, entity.getURI());
|
|
||||||
long elapsedTimeMillis = System.currentTimeMillis()-start;
|
|
||||||
log.info("Time to create rich export model: msecs = " + elapsedTimeMillis);
|
|
||||||
|
|
||||||
newModel.add(extendedModel);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
return newModel;
|
|
||||||
}
|
|
||||||
|
|
||||||
/* Get the properties that are difficult to get via a filtered WebappDaoFactory. */
|
|
||||||
private Model getLabelAndTypes(Individual entity, Model ontModel, Model newModel){
|
|
||||||
for( VClass vclass : entity.getVClasses()){
|
|
||||||
newModel.add(newModel.getResource(entity.getURI()), RDF.type, newModel.getResource(vclass.getURI()));
|
|
||||||
}
|
|
||||||
|
|
||||||
ontModel.enterCriticalSection(Lock.READ);
|
|
||||||
try {
|
|
||||||
newModel.add(ontModel.listStatements(ontModel.getResource(entity.getURI()), RDFS.label, (RDFNode)null));
|
|
||||||
} finally {
|
|
||||||
ontModel.leaveCriticalSection();
|
|
||||||
}
|
|
||||||
|
|
||||||
return newModel;
|
|
||||||
}
|
|
||||||
|
|
||||||
private Pattern badrequest= Pattern.compile(".*([&\\?=]|\\.\\.).*");
|
|
||||||
|
|
||||||
public String getViewFromRequest(HttpServletRequest request){
|
|
||||||
String viewParam = request.getParameter("view");
|
|
||||||
if( viewParam != null ){
|
|
||||||
if( badrequest.matcher(viewParam).matches() ){
|
|
||||||
log.debug("request for a non-default view was bad: " + viewParam);
|
|
||||||
return null;
|
|
||||||
}else{
|
|
||||||
log.debug("view request : " + viewParam);
|
|
||||||
return viewParam;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
return null;
|
|
||||||
}
|
|
||||||
|
|
||||||
@Override
|
|
||||||
public void doPost(HttpServletRequest request, HttpServletResponse response)
|
|
||||||
throws ServletException,IOException {
|
|
||||||
doGet(request, response);
|
|
||||||
}
|
|
||||||
|
|
||||||
private ResponseValues doHelp() throws IOException, ServletException {
|
|
||||||
return new TemplateResponseValues(TEMPLATE_HELP);
|
|
||||||
}
|
|
||||||
|
|
||||||
private ResponseValues doNotFound(VitroRequest vreq) throws IOException, ServletException {
|
|
||||||
|
|
||||||
//set title before we do the highlighting so we don't get markup in it.
|
|
||||||
Map<String, Object> body = new HashMap<String, Object>();
|
|
||||||
body.put("title","Individual Not Found");
|
|
||||||
body.put("errorMessage", "The individual was not found in the system.");
|
|
||||||
|
|
||||||
return new TemplateResponseValues(Template.TITLED_ERROR_MESSAGE.toString(), body, HttpServletResponse.SC_NOT_FOUND);
|
|
||||||
}
|
|
||||||
|
|
||||||
public static Map<String, Float> getAcceptedContentTypes() {
|
|
||||||
if( qsMap == null ){
|
|
||||||
HashMap<String,Float> map = new HashMap<String,Float>();
|
|
||||||
map.put(HTML_MIMETYPE , 0.5f);
|
|
||||||
map.put(XHTML_MIMETYPE, 0.5f);
|
|
||||||
map.put("application/xml", 0.5f);
|
|
||||||
map.put(RDFXML_MIMETYPE, 1.0f);
|
|
||||||
map.put(N3_MIMETYPE, 1.0f);
|
|
||||||
map.put(TTL_MIMETYPE, 1.0f);
|
|
||||||
qsMap = map;
|
|
||||||
}
|
|
||||||
return qsMap;
|
|
||||||
}
|
|
||||||
|
|
||||||
public static boolean includeInLinkedData(Resource object, Model contextModel) {
|
|
||||||
|
|
||||||
boolean retval = false;
|
|
||||||
|
|
||||||
contextModel.enterCriticalSection(Lock.READ);
|
|
||||||
|
|
||||||
try {
|
|
||||||
StmtIterator iter = contextModel.listStatements(object, RDF.type, (RDFNode)null);
|
|
||||||
|
|
||||||
while (iter.hasNext()) {
|
|
||||||
Statement stmt = iter.next();
|
|
||||||
|
|
||||||
if (stmt.getObject().isResource() && contextModel.contains(stmt.getObject().asResource(), extendedLinkedDataProperty, xsdTrue)) {
|
|
||||||
retval = true;
|
|
||||||
break;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
} finally {
|
|
||||||
contextModel.leaveCriticalSection();
|
|
||||||
}
|
|
||||||
|
|
||||||
return retval;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
@ -1,532 +0,0 @@
|
||||||
/* $This file is distributed under the terms of the license in /doc/license.txt$ */
|
|
||||||
|
|
||||||
package edu.cornell.mannlib.vitro.webapp.controller.individual;
|
|
||||||
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.FS_ALIAS_URL;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.FS_DOWNLOAD_LOCATION;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.FS_FILENAME;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.FS_MIME_TYPE;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.OWL_THING;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.RDF_TYPE;
|
|
||||||
import static edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary.VITRO_PUBLIC;
|
|
||||||
import static junit.framework.Assert.assertEquals;
|
|
||||||
import static junit.framework.Assert.fail;
|
|
||||||
|
|
||||||
import java.io.File;
|
|
||||||
import java.io.IOException;
|
|
||||||
import java.net.URL;
|
|
||||||
|
|
||||||
import javax.servlet.ServletContextEvent;
|
|
||||||
import javax.servlet.ServletException;
|
|
||||||
|
|
||||||
import org.apache.log4j.Level;
|
|
||||||
import org.junit.After;
|
|
||||||
import org.junit.Before;
|
|
||||||
import org.junit.Ignore;
|
|
||||||
import org.junit.Test;
|
|
||||||
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.beans.IndividualStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.beans.SelfEditingConfigurationStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.config.ConfigurationPropertiesStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.ApplicationDaoStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.IndividualDaoStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.MenuDaoStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.ObjectPropertyStatementDaoStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.OntologyDaoStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactoryStub;
|
|
||||||
import stubs.edu.cornell.mannlib.vitro.webapp.utils.NamespaceMapperStub;
|
|
||||||
import stubs.javax.servlet.ServletConfigStub;
|
|
||||||
import stubs.javax.servlet.ServletContextStub;
|
|
||||||
import stubs.javax.servlet.http.HttpServletRequestStub;
|
|
||||||
import stubs.javax.servlet.http.HttpServletResponseStub;
|
|
||||||
import stubs.javax.servlet.http.HttpSessionStub;
|
|
||||||
|
|
||||||
import com.hp.hpl.jena.ontology.OntModel;
|
|
||||||
import com.hp.hpl.jena.rdf.model.ModelFactory;
|
|
||||||
import com.hp.hpl.jena.rdf.model.Property;
|
|
||||||
import com.hp.hpl.jena.rdf.model.Resource;
|
|
||||||
|
|
||||||
import edu.cornell.mannlib.vitro.testing.AbstractTestClass;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.beans.ApplicationBean;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.beans.SelfEditingConfiguration;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.config.ConfigurationProperties;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.config.RevisionInfoBean;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.controller.VitroHttpServlet;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.FreemarkerSetup;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.IndividualController;
|
|
||||||
import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
|
|
||||||
|
|
||||||
/**
|
|
||||||
* TODO
|
|
||||||
*/
|
|
||||||
public class IndividualControllerInfoTest extends AbstractTestClass {
|
|
||||||
/** The root of the application */
|
|
||||||
private static final String URL_HOME_PAGE = "http://vivo.mydomain.edu";
|
|
||||||
|
|
||||||
/** The page we're testing. */
|
|
||||||
private static final String URL_INDIVIDUAL_PAGE = URL_HOME_PAGE
|
|
||||||
+ "/individual";
|
|
||||||
|
|
||||||
/** The default namespace is based on this page URL! */
|
|
||||||
private static final String DEFAULT_NAMESPACE = URL_INDIVIDUAL_PAGE + "/";
|
|
||||||
|
|
||||||
/** The ID of the Individual we're trying to find. */
|
|
||||||
private static final String ID_INDIVIDUAL_TEST = "testId";
|
|
||||||
|
|
||||||
/** The ID of an Individual that represents a FileBytestream object. */
|
|
||||||
private static final String ID_FILE_BYTESTREAM = "bytesId";
|
|
||||||
|
|
||||||
/** The ID of an Individual that is the surrogate for ID_FILE_BYTESTREAM. */
|
|
||||||
private static final String ID_FILE_SURROGATE = "fileId";
|
|
||||||
|
|
||||||
/** The URI of the Individual we're trying to find. */
|
|
||||||
private static final String URI_INDIVIDUAL_TEST = DEFAULT_NAMESPACE
|
|
||||||
+ ID_INDIVIDUAL_TEST;
|
|
||||||
|
|
||||||
/** The URI of the Individual that represents a FileBytestream object. */
|
|
||||||
private static final String URI_FILE_BYTESTREAM = DEFAULT_NAMESPACE
|
|
||||||
+ ID_FILE_BYTESTREAM;
|
|
||||||
|
|
||||||
/** The URI of the Individual that represents a FileSurrogate object. */
|
|
||||||
private static final String URI_FILE_SURROGATE = DEFAULT_NAMESPACE
|
|
||||||
+ ID_FILE_SURROGATE;
|
|
||||||
|
|
||||||
/** The name of the file bytestream. */
|
|
||||||
private static final String BYTESTREAM_FILENAME = "imageFilename.jpg";
|
|
||||||
/** The direct location of the file bytestream. */
|
|
||||||
private static final String URL_BYTESTREAM_ALIAS = URL_HOME_PAGE + "/file/"
|
|
||||||
+ ID_FILE_BYTESTREAM + "/" + BYTESTREAM_FILENAME;
|
|
||||||
|
|
||||||
/** The Net ID of the User whose profile we're trying to find. */
|
|
||||||
private static final String NETID_USER_TEST = "joeUser";
|
|
||||||
|
|
||||||
private IndividualStub testIndividual;
|
|
||||||
private IndividualStub bytestreamIndividual;
|
|
||||||
private IndividualStub surrogateIndividual;
|
|
||||||
private edu.cornell.mannlib.vitro.webapp.controller.freemarker.IndividualController controller;
|
|
||||||
private ServletContextStub ctx;
|
|
||||||
private ServletConfigStub config;
|
|
||||||
private HttpSessionStub session;
|
|
||||||
private HttpServletRequestStub req;
|
|
||||||
private HttpServletResponseStub resp;
|
|
||||||
|
|
||||||
private WebappDaoFactoryStub waDao;
|
|
||||||
private ApplicationDaoStub aDao;
|
|
||||||
private MenuDaoStub menuDao;
|
|
||||||
private IndividualDaoStub iDao;
|
|
||||||
private OntologyDaoStub ontDao;
|
|
||||||
private ObjectPropertyStatementDaoStub opsDao;
|
|
||||||
private ConfigurationPropertiesStub props;
|
|
||||||
private NamespaceMapperStub namespaceMapper;
|
|
||||||
|
|
||||||
private File templatesDir;
|
|
||||||
|
|
||||||
@Before
|
|
||||||
public void setup() throws ServletException, IOException {
|
|
||||||
testIndividual = new IndividualStub(URI_INDIVIDUAL_TEST);
|
|
||||||
|
|
||||||
bytestreamIndividual = new IndividualStub(URI_FILE_BYTESTREAM);
|
|
||||||
bytestreamIndividual.addVclass(VITRO_PUBLIC, "FileByteStream",
|
|
||||||
"Bytestream");
|
|
||||||
bytestreamIndividual.addDataPropertyStatement(FS_ALIAS_URL,
|
|
||||||
URL_BYTESTREAM_ALIAS);
|
|
||||||
|
|
||||||
surrogateIndividual = new IndividualStub(URI_FILE_SURROGATE);
|
|
||||||
surrogateIndividual.addVclass(VITRO_PUBLIC, "File", "Surrogate");
|
|
||||||
surrogateIndividual.addDataPropertyStatement(FS_FILENAME,
|
|
||||||
BYTESTREAM_FILENAME);
|
|
||||||
surrogateIndividual
|
|
||||||
.addDataPropertyStatement(FS_MIME_TYPE, "image/jpeg");
|
|
||||||
surrogateIndividual
|
|
||||||
.addPopulatedObjectPropertyStatement(FS_DOWNLOAD_LOCATION,
|
|
||||||
URI_FILE_BYTESTREAM, bytestreamIndividual);
|
|
||||||
|
|
||||||
ctx = new ServletContextStub();
|
|
||||||
|
|
||||||
setLoggerLevel(ConfigurationProperties.class, Level.WARN);
|
|
||||||
props = new ConfigurationPropertiesStub();
|
|
||||||
props.setBean(ctx);
|
|
||||||
|
|
||||||
config = new ServletConfigStub();
|
|
||||||
config.setServletContext(ctx);
|
|
||||||
|
|
||||||
session = new HttpSessionStub();
|
|
||||||
session.setServletContext(ctx);
|
|
||||||
|
|
||||||
namespaceMapper = new NamespaceMapperStub();
|
|
||||||
namespaceMapper.setPrefixForNamespace("mydomain",
|
|
||||||
"http://vivo.mydomain.edu/individual/");
|
|
||||||
ctx.setAttribute("NamespaceMapper", namespaceMapper);
|
|
||||||
|
|
||||||
SelfEditingConfigurationStub sec = new SelfEditingConfigurationStub();
|
|
||||||
session.setAttribute(SelfEditingConfiguration.class.getName(), sec);
|
|
||||||
sec.addAssociatedIndividual(NETID_USER_TEST, testIndividual);
|
|
||||||
|
|
||||||
controller = new edu.cornell.mannlib.vitro.webapp.controller.freemarker.IndividualController();
|
|
||||||
controller.init(config);
|
|
||||||
|
|
||||||
req = new HttpServletRequestStub();
|
|
||||||
req.setSession(session);
|
|
||||||
|
|
||||||
resp = new HttpServletResponseStub();
|
|
||||||
|
|
||||||
waDao = new WebappDaoFactoryStub();
|
|
||||||
req.setAttribute("webappDaoFactory", waDao);
|
|
||||||
waDao.setDefaultNamespace(DEFAULT_NAMESPACE);
|
|
||||||
|
|
||||||
ApplicationBean appBean = new ApplicationBean();
|
|
||||||
|
|
||||||
aDao = new ApplicationDaoStub();
|
|
||||||
aDao.setApplicationBean(appBean);
|
|
||||||
waDao.setApplicationDao(aDao);
|
|
||||||
|
|
||||||
menuDao = new MenuDaoStub();
|
|
||||||
waDao.setMenuDao(menuDao);
|
|
||||||
|
|
||||||
iDao = new IndividualDaoStub();
|
|
||||||
waDao.setIndividualDao(iDao);
|
|
||||||
iDao.addIndividual(testIndividual);
|
|
||||||
iDao.addIndividual(bytestreamIndividual);
|
|
||||||
iDao.addIndividual(surrogateIndividual);
|
|
||||||
|
|
||||||
ontDao = new OntologyDaoStub();
|
|
||||||
waDao.setOntologyDao(ontDao);
|
|
||||||
|
|
||||||
opsDao = new ObjectPropertyStatementDaoStub();
|
|
||||||
waDao.setObjectPropertyStatementDao(opsDao);
|
|
||||||
opsDao.addObjectPropertyStatement(URI_FILE_SURROGATE,
|
|
||||||
FS_DOWNLOAD_LOCATION, URI_FILE_BYTESTREAM);
|
|
||||||
|
|
||||||
OntModel ontModel = ModelFactory.createOntologyModel();
|
|
||||||
addObjectProperty(ontModel, URI_INDIVIDUAL_TEST, RDF_TYPE, OWL_THING);
|
|
||||||
addObjectProperty(ontModel, URI_FILE_BYTESTREAM, RDF_TYPE,
|
|
||||||
VitroVocabulary.FS_BYTESTREAM_CLASS);
|
|
||||||
req.setAttribute("jenaOntModel", ontModel);
|
|
||||||
|
|
||||||
templatesDir = createTempDirectory("templates");
|
|
||||||
ctx.setRealPath("/templates/freemarker", templatesDir.getAbsolutePath());
|
|
||||||
createFile(templatesDir, "error-titled.ftl", "Bogus error-titled.ftl");
|
|
||||||
createFile(templatesDir, "individual-help.ftl",
|
|
||||||
"Bogus individual-help.ftl");
|
|
||||||
createFile(templatesDir, "page.ftl", "Bogus page.ftl: ${body}");
|
|
||||||
createFile(templatesDir, "pageSetup.ftl", "Bogus page setup.ftl");
|
|
||||||
createFile(templatesDir, "individual.ftl",
|
|
||||||
"Individual page: ${individual.uri}");
|
|
||||||
|
|
||||||
new FreemarkerSetup().contextInitialized(new ServletContextEvent(ctx));
|
|
||||||
}
|
|
||||||
|
|
||||||
@Before
|
|
||||||
public void setLoggerLevels() {
|
|
||||||
setLoggerLevel(RevisionInfoBean.class, Level.ERROR);
|
|
||||||
setLoggerLevel(FreemarkerSetup.class, Level.WARN);
|
|
||||||
// setLoggerLevel(IndividualController.class, Level.DEBUG);
|
|
||||||
}
|
|
||||||
|
|
||||||
@After
|
|
||||||
public void teardown() {
|
|
||||||
purgeDirectory(templatesDir);
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Tests - locate by parameter
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
/** /individual?id=individualLocalName */
|
|
||||||
@Ignore
|
|
||||||
// Doesn't work; won't fix.
|
|
||||||
@Test
|
|
||||||
public void findIndividualByIdParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("id", ID_INDIVIDUAL_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by id parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual?entityId=individualLocalName */
|
|
||||||
@Ignore
|
|
||||||
// Doesn't work; won't fix.
|
|
||||||
@Test
|
|
||||||
public void findIndividualByEntityIdParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("entityId", ID_INDIVIDUAL_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by id parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual?uri=urlencodedURI */
|
|
||||||
@Test
|
|
||||||
public void findIndividualByUriParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("uri", URI_INDIVIDUAL_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by uri parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual?netId=bdc34 */
|
|
||||||
@Test
|
|
||||||
public void findIndividualByNetIdParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("netId", NETID_USER_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by uri parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual?netid=bdc34 */
|
|
||||||
@Test
|
|
||||||
public void findIndividualByNetidParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("netid", NETID_USER_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by uri parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Tests - miscellaneous
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
/** /display/localname */
|
|
||||||
@Test
|
|
||||||
public void findIndividualByDisplayPath() {
|
|
||||||
req.setRequestUrl(url(URL_HOME_PAGE + "/display/" + ID_INDIVIDUAL_TEST));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by uri parameter", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/nsPrefix/localname */
|
|
||||||
@Test
|
|
||||||
public void findByPrefixAndLocalname() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + "mydomain/"
|
|
||||||
+ ID_INDIVIDUAL_TEST));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by prefix and localname", "Individual page: "
|
|
||||||
+ URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/a/b/c fails. */
|
|
||||||
@Test
|
|
||||||
public void unrecognizedPath() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + "this/that/theOther"));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("unrecognized path", "error-titled.ftl");
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /display/localname but no such individual */
|
|
||||||
@Test
|
|
||||||
public void findNoSuchIndividualByDisplayPath() {
|
|
||||||
req.setRequestUrl(url(URL_HOME_PAGE + "/display/" + "bogusID"));
|
|
||||||
req.addParameter("netid", NETID_USER_TEST);
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("by uri parameter", "error-titled.ftl");
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Tests - redirect a FileBytestream
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void redirectAFileBytestreamIndividual() {
|
|
||||||
req.setRequestUrl(url(URL_HOME_PAGE + "/display/" + ID_FILE_BYTESTREAM));
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("redirect file bytestream", URL_BYTESTREAM_ALIAS);
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Tests - redirect from a Linked Data path
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
/** /individual/localname, accept=RDF redirects to /individual/id/id.rdf */
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathAcceptRdf() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
req.setHeader("accept", VitroHttpServlet.RDFXML_MIMETYPE);
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, accept RDF",
|
|
||||||
redirectUrlForRdfStream(ID_INDIVIDUAL_TEST, ".rdf"));
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/localname, accept=RDF redirects to /individual/id/id.rdf */
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathAcceptN3() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
req.setHeader("accept", VitroHttpServlet.N3_MIMETYPE);
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, accept RDF",
|
|
||||||
redirectUrlForRdfStream(ID_INDIVIDUAL_TEST, ".n3"));
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/localname, accept=RDF redirects to /individual/id/id.rdf */
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathAcceptTurtle() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
req.setHeader("accept", VitroHttpServlet.TTL_MIMETYPE);
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, accept RDF",
|
|
||||||
redirectUrlForRdfStream(ID_INDIVIDUAL_TEST, ".ttl"));
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/localname, no accept, redirects to /display/id */
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathNoAccept() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, no accept", "/display/"
|
|
||||||
+ ID_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/**
|
|
||||||
* If the accept header is set to a recognized value, but not one of the
|
|
||||||
* onese that we like, treat the same as no accept.
|
|
||||||
*/
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathAcceptStrange() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
req.setHeader("accept", "application/json");
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, no accept", "/display/"
|
|
||||||
+ ID_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/**
|
|
||||||
* If the accept header is set to an unrecognized value, treat the same as
|
|
||||||
* no accept.
|
|
||||||
*/
|
|
||||||
@Test
|
|
||||||
public void redirectFromLinkedDataPathAcceptGarbage() {
|
|
||||||
req.setRequestUrl(url(DEFAULT_NAMESPACE + ID_INDIVIDUAL_TEST));
|
|
||||||
req.setHeader("accept", "a/b/c");
|
|
||||||
runTheRequest();
|
|
||||||
assertRedirect("by linked data path, no accept", "/display/"
|
|
||||||
+ ID_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Tests - satisfy requests for RDF formats.
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void getRdfByUriAndFormatParameters() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("uri", URI_INDIVIDUAL_TEST);
|
|
||||||
req.addParameter("format", "rdfxml");
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("RDF by uri and format parameters", "<rdf:RDF");
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void getN3ByUriAndFormatParameters() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("uri", URI_INDIVIDUAL_TEST);
|
|
||||||
req.addParameter("format", "n3");
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("N3 by uri and format parameters",
|
|
||||||
"@prefix vitro:");
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void getTurtleByUriAndFormatParameters() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("uri", URI_INDIVIDUAL_TEST);
|
|
||||||
req.addParameter("format", "ttl");
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("Turtle by uri and format parameters",
|
|
||||||
"@prefix vitro:");
|
|
||||||
}
|
|
||||||
|
|
||||||
@Test
|
|
||||||
public void unrecognizedFormatParameter() {
|
|
||||||
req.setRequestUrl(url(URL_INDIVIDUAL_PAGE));
|
|
||||||
req.addParameter("uri", URI_INDIVIDUAL_TEST);
|
|
||||||
req.addParameter("format", "bogus");
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("unrecognized format means HTML response",
|
|
||||||
"Individual page: " + URI_INDIVIDUAL_TEST);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** http://vivo.cornell.edu/individual/n23/n23.rdf */
|
|
||||||
@Test
|
|
||||||
public void getRdfByStreamRequest() {
|
|
||||||
req.setRequestUrl(absoluteUrlForRdfStream(ID_INDIVIDUAL_TEST, ".rdf"));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("RDF by RDF stream request", "<rdf:RDF");
|
|
||||||
}
|
|
||||||
|
|
||||||
/** http://vivo.cornell.edu/individual/n23/n23.n3 */
|
|
||||||
@Test
|
|
||||||
public void getN3ByStreamRequest() {
|
|
||||||
req.setRequestUrl(absoluteUrlForRdfStream(ID_INDIVIDUAL_TEST, ".n3"));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("N3 by RDF stream request", "@prefix vitro:");
|
|
||||||
}
|
|
||||||
|
|
||||||
/** http://vivo.cornell.edu/individual/n23/n23.rdf */
|
|
||||||
@Test
|
|
||||||
public void getTurtleByStreamRequest() {
|
|
||||||
req.setRequestUrl(absoluteUrlForRdfStream(ID_INDIVIDUAL_TEST, ".ttl"));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("Turtle by RDF stream request", "@prefix vitro:");
|
|
||||||
}
|
|
||||||
|
|
||||||
/** http://vivo.cornell.edu/individual/n23/n23.bogus is an error */
|
|
||||||
@Test
|
|
||||||
public void unrecognizedFormatForRdfStreamRequest() {
|
|
||||||
req.setRequestUrl(absoluteUrlForRdfStream(ID_INDIVIDUAL_TEST, ".bogus"));
|
|
||||||
runTheRequest();
|
|
||||||
assertResponseContains("Unrecognized RDF stream request",
|
|
||||||
"error-titled.ftl");
|
|
||||||
}
|
|
||||||
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
// Helper methods
|
|
||||||
// ----------------------------------------------------------------------
|
|
||||||
|
|
||||||
private void addObjectProperty(OntModel ontModel, String subjectUri,
|
|
||||||
String propertyUri, String objectUri) {
|
|
||||||
Resource s = ontModel.getResource(subjectUri);
|
|
||||||
Property p = ontModel.getProperty(propertyUri);
|
|
||||||
Resource o = ontModel.getResource(objectUri);
|
|
||||||
ontModel.add(s, p, o);
|
|
||||||
}
|
|
||||||
|
|
||||||
/** /individual/n23/n23.rdf, or the like */
|
|
||||||
private String redirectUrlForRdfStream(String id, String extension) {
|
|
||||||
return "/individual/" + id + "/" + id + extension;
|
|
||||||
}
|
|
||||||
|
|
||||||
/** http://vivo.mydomain.edu/individual/n23/n23.rdf, or the like */
|
|
||||||
private URL absoluteUrlForRdfStream(String id, String extension) {
|
|
||||||
return url(DEFAULT_NAMESPACE + id + "/" + id + extension);
|
|
||||||
}
|
|
||||||
|
|
||||||
private void runTheRequest() {
|
|
||||||
try {
|
|
||||||
controller.doGet(req, resp);
|
|
||||||
} catch (IOException e) {
|
|
||||||
fail("Error while running the controller: " + e.toString());
|
|
||||||
} catch (ServletException e) {
|
|
||||||
fail("Error while running the controller: " + e.toString());
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
private void assertResponseContains(String message, String outputFragment) {
|
|
||||||
String output = resp.getOutput();
|
|
||||||
if (!output.contains(outputFragment)) {
|
|
||||||
fail(message + ": output did not contain '" + outputFragment
|
|
||||||
+ "': output was '" + output + "'");
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
private void assertRedirect(String message, String redirectUrl) {
|
|
||||||
if (!resp.containsHeader("Location")) {
|
|
||||||
fail(message + ":, Not redirected - no Location header");
|
|
||||||
}
|
|
||||||
String actual = resp.getHeader("Location");
|
|
||||||
assertEquals(message, redirectUrl, actual);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
Loading…
Add table
Reference in a new issue