Fixed getVClassesForProperty to return subclasses NIHVIVO-3814
Added unit test for getVClassesForProperty Changes to debugging messages for solr indexing
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4 changed files with 79 additions and 15 deletions
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@ -745,7 +745,10 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
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if (superclass == null) {
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superclass = (domainSide) ? op.getRange() : op.getDomain();
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if (superclass == null) {
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superclass = getOntModel().getOntResource(OWL.Thing.getURI());
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//this section to prevent all subclasses of owl:Thing
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//returned if range is owl:Thing, refer to NIHVIVO-3357 NIHVIVO-3814
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//This is unfortunate case of warping the model for the ease of the display.
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return Collections.emptyList();
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}
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}
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if (superclass != null) {
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@ -755,11 +758,15 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
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} else {
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superVclass = getVClassByURI(superclass.getURI());
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}
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if( OWL.Thing.equals( superclass )){
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//this section to prevent all subclasses of owl:Thing
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//returned if range is owl:Thing, refer to NIHVIVO-3357 NIHVIVO-3814
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//This is unfortunate case of warping the model for the ease of the display.
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return Collections.emptyList();
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}
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if (superVclass != null) {
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vClasses.add(superVclass);
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//Commenting out this section to prevent all subclasses of owl:Thing
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//returned if range is owl:Thing, refer to NIHVIVO-3357
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/* String isInferencing = getWebappDaoFactory().getProperties().get("infersTypes");
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vClasses.add(superVclass);
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String isInferencing = getWebappDaoFactory().getProperties().get("infersTypes");
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// if this model infers types based on the taxonomy, adding the subclasses will only
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// waste time for no benefit
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PelletListener pl = getWebappDaoFactory().getPelletListener();
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@ -772,7 +779,7 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
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if (vClass != null)
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vClasses.add(vClass);
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}
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} */
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}
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}
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}
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}
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@ -437,7 +437,8 @@ public class IndexBuilder extends VitroBackgroundThread {
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work.get( counter % workers ).add( uris.next() );
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counter ++;
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}
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log.info("Number of individuals to be indexed : " + counter);
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log.info("Number of individuals to be indexed : " + counter + " by "
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+ workers + " worker theads.");
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return work;
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}
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@ -119,14 +119,14 @@ public class IndividualToSolrDocument {
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throws SkipIndividualException{
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//run the document modifiers
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if( documentModifiers != null && !documentModifiers.isEmpty()){
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docModCount++;
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for(DocumentModifier modifier: documentModifiers){
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long start = System.currentTimeMillis();
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modifier.modifyDocument(ind, doc, addUri);
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if( log.isDebugEnabled()){
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docModCount++;
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if( log.isDebugEnabled()){
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long delta = System.currentTimeMillis() - start;
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synchronized(docModClassToTime){
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Class clz = modifier.getClass();
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@ -137,8 +137,9 @@ public class IndividualToSolrDocument {
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docModClassToTime.put(clz.getName(), delta);
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}
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}
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if( docModCount % 100 == 0 ){
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for( Entry<String, Long> entry: docModClassToTime.entrySet()){
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if( docModCount % 200 == 0 ){
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log.debug("DocumentModifier timings");
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for( Entry<String, Long> entry: docModClassToTime.entrySet()){
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log.debug("average msec to run " + entry.getKey() + ": " + (entry.getValue()/docModCount));
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}
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}
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