Commit graph

5281 commits

Author SHA1 Message Date
Ted Lawless
4808367ed5 Add YASQE - allows for syntax highlighting and prefix autocompletion. 2015-11-12 13:56:53 -05:00
Graham Triggs
3157b0941c Fix to regular expression replacement 2015-11-09 18:41:57 +00:00
Graham Triggs
dd76bb73a4 Faster Graph query for sprawl interface; add caching as it is still quite slow 2015-11-06 11:15:39 +00:00
grahamtriggs
cc300bf419 Minor correction to the range test in the form for choosing the title. 2015-11-04 16:23:27 +00:00
grahamtriggs
15bc18b69a Allow SPRAQL endpoint to have credentials on read as well as write; update Virtuoso normalisation of types 2015-11-04 11:03:07 +00:00
grahamtriggs
817e90716c [VIVO-1122] Fix to the way resources are consumed in the SPARQL clients, so that it doesn't leak / tie up HTTP connections. 2015-11-03 01:19:38 +00:00
grahamtriggs
046d445639 Enable new visualisations by default 2015-11-02 18:32:26 +00:00
grahamtriggs
6a4dfbb43f [VIVO-1031] Faster list filtering (for large lists) 2015-11-02 10:29:54 +00:00
grahamtriggs
c8818932a4 [VIVO-1031] Minor cleanup 2015-10-31 22:19:27 +00:00
grahamtriggs
a5084a614c Remove last use of graph wrapper from reinferencer 2015-10-31 19:01:51 +00:00
grahamtriggs
25874449dd Replace the other instance where the reinferencer was going through a serialisation that could easily be a direct write into a model. 2015-10-31 14:41:56 +00:00
grahamtriggs
1832bba831 [VIVO-1031] Minor improvements to remove RDFServiceGraph usage from reinferencer. 2015-10-31 14:13:44 +00:00
grahamtriggs
5d6f4dada7 [VIVO-1031] Small caching layer in the ABoxRecomputer to reduce overhead of continually querying for the same type information. 2015-10-31 12:46:45 +00:00
grahamtriggs
11ce991913 Tweak to UI to get correct select text appearing 2015-10-30 23:11:33 +00:00
grahamtriggs
3bff514d97 Remove redundant stream object 2015-10-30 16:20:29 +00:00
grahamtriggs
c0f482344d [VIVO-1068] Hide SPARQL Query Builder 2015-10-23 16:30:33 +01:00
grahamtriggs
efd431a332 Minor code cleanup 2015-10-23 15:26:18 +01:00
grahamtriggs
31898440f3 [VIVO-1115] Pass properties from the config to enable AltMetric badges 2015-10-22 15:27:05 +01:00
grahamtriggs
d6c8d05018 Extension point to allow text to be inserted before the header 2015-10-22 08:33:30 +01:00
grahamtriggs
5cdbd6cf37 Add style for use in edit pages 2015-10-20 13:25:39 +01:00
grahamtriggs
acae9bbf94 [VIVO-1079] Fix debugging problem when not using constructed models 2015-10-20 10:40:55 +01:00
grahamtriggs
34d78a9463 [VIVO-1031] Use consumer interface for most ResultSets 2015-10-19 17:16:09 +01:00
grahamtriggs
39b0d2e6bd [VIVO-1031] Add methods to process construct / select queries without buffering / translating through streams. 2015-10-17 22:03:12 +01:00
grahamtriggs
db0bb6a5e6 [VIVO-1031] Always execute SDB queries against the dataset and not the default model 2015-10-15 22:58:48 +01:00
grahamtriggs
48790b7525 Update TinyMCE to 3.5.3, enable stripping of Word styles on paste 2015-10-14 22:17:16 +01:00
grahamtriggs
83404c2c80 [VIVO-1075] Get Literal and Integer from count RDFNode rather than a toString/parseInt which fails if there is a type present. 2015-10-14 07:54:48 +01:00
grahamtriggs
2f6489610c [VIVO-1031] Rework the resolve faux properties method so that it is much faster for logged in users. 2015-10-14 07:43:40 +01:00
grahamtriggs
f37f115160 [VIVO-1031] HTML sanitisation is slow - for now, replace AntiSamy with simple RegEx of JavaScript patterns for significant boost. Will add full sanitisation to the input later. 2015-10-09 10:34:23 +01:00
grahamtriggs
b64b87ee1a Fix incorrect parameter order 2015-10-06 11:38:51 +01:00
grahamtriggs
7fbaf1cadc Pause counting to avoid problems of overlapping pause / unpauses, add event to notify of the intention to rebuild the index, so that overhead of tracking unnecessary indexing can be reduced 2015-10-03 08:44:26 +01:00
grahamtriggs
656488b958 [VIVO-1031] Shave off 2/3rds of time required to check if any triples exist by using Jena API instead of SPARQL ASK 2015-09-29 21:59:01 +01:00
grahamtriggs
15cd6a8ac0 [VIVO-1031] Improve logged in performance by handling a bulk of faux properties statements at once, rather than one-by-one. 2015-09-29 17:02:50 +01:00
grahamtriggs
4883621236 [VIVO-1059] Improve bind parameter method in SparqlQueryDataGetter so that variables with a common root are bound correctly - e.g. binding ?individual won't match ?individualURI
(Does not use full set of allowed Sparql characters, but should catch all commonly used cases)
2015-09-25 22:16:41 +01:00
Tim Worrall
937a3abca5 No Jira issue. When a person has no webpages, the group_concat in the query resulted in a non-empty result set: one that had no values but was nonetheless not empty. Added a check to see if the node was null. 2015-08-25 10:56:59 -04:00
Jim Blake
b70cb2fb49 Merge pull request #23 from zednis/patch-1
simplified getConfigFromSession logic with ternary operator
2015-08-17 10:07:35 -04:00
Stephan Zednik
5ed701be79 simplified getConfigFromSession logic with ternary operator 2015-08-17 00:05:49 -06:00
Benjamin Gross
ed3cdb0d1f replace outdated list view doc reference 2015-07-31 12:02:28 -06:00
Tim Worrall
2b3d32f6a3 No Jira issue. Add tooltips to object property labels by pulling in the public description of the property. 2015-07-10 13:09:02 -04:00
Tim Worrall
3fdc17d16d No Jira issue. Add tooltips to object property labels by pulling in the public description of th eproperty. 2015-07-10 12:21:14 -04:00
Jim Blake
f993cf85ab Guard against accidental blanks in developer.properties 2015-06-09 11:36:15 -04:00
hudajkhan
5db470d307 VIVO-1032 retrieve whether or not property is a faux property 2015-05-26 19:58:31 -04:00
Jim Blake
2058fbf2a6 VIVO-1026 Back off to an older version of HttpClient
OWLAPI 4.0.1 uses HttpClient 4.2.5, and we were getting a class-version conflict in some contexts.
2015-05-03 17:38:38 -04:00
Jim Blake
0b79dfdf01 VIVO-1025 Improvements to the Virtuoso driver. 2015-04-27 14:45:14 -04:00
Jim Blake
586fa09666 Merge branch 'maint-rel-1.8' into develop 2015-04-22 15:34:49 -04:00
Jim Blake
c7979c05a7 VIVO-1018 RiotReader.createIteratorTriples() assumes an ASCII stream, so we need a different method. 2015-04-22 15:34:06 -04:00
Jim Blake
570cd78667 VIVO-1022 Correct licenser for example ORNG gadgets. 2015-04-21 16:42:24 -04:00
Jim Blake
c623e32cff VIVO-1017 Fix stupid mistake from VIVO-1015
When the variables were given meaningful names, it became obvious that I was checking
the wrong one to see whether it was a faux property.
2015-04-15 11:13:27 -04:00
Jim Blake
c8eca40385 VIVO-1015 fix the redundancy check for restricted properties.
Now that we have faux properties, we consider two object properties to be different if they have different ranges.
However, an object property with a restriction appears to have a different range from its base property, but is
considered to be the same property. Fix this.
2015-04-13 16:25:25 -04:00
Jim Blake
dc726d2600 VIVO-1016 Avoid crashing on ABox.isEmpty()
1) Don't ask whether the ABox is empty, if you don't need to
2) If you must ask, ask the graph of the base model, to avoid SDB layers
3) change contains() to use SELECT instead of ASK, because SDB implements ASK very poorly.
2015-04-13 10:25:58 -04:00
Tim Worrall
d8aaecd4fd No Jira issue. Fixed a null pointer exception when I data property has no rangeDatatypeUri. 2015-04-08 16:15:59 -04:00