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88 commits

Author SHA1 Message Date
grahamtriggs
b5da11c2be Faster implementation of TPF for SDB (#54) 
* Initial performance improvements to TPF

* Add faster counts for TPF

* Correct end count

* Bug fixes, use hashes for filtering

* Initial LDF SPARQL client

* Handle blank nodes correctly
 2017-01-31 21:09:49 +00:00
Graham Triggs
1426b005f2 Minor TPF endpoint fixes 2017-01-17 11:40:48 +00:00
Jim Blake
9cd5a1329a VIVO-1248 extend SparqlQueryRunner, and combine with older attempts. (#45) 
* Ignore artifacts that Eclipse creates.

* VIVO-1248 Create the utils.sparqlrunner package.

This is a merge of most of the edu.cornell.mannlib.vitro.webapp.utils.sparql package with
edu.cornell.mannlib.vitro.webapp.utils.SparqlQueryRunner

Remove the references to those classes.

* VIVO-1248 extend SparqlQueryRunner, and combine with older attempts.
 2017-01-03 13:16:22 -05:00
Jim Blake
a8ec633f71 VIVO-1246 Improve the ConfigurationBeanLoader (#52) 
* VIVO-1246 improve the ConfigurationBeanLoader:

Add cardinality parameters minOccurs and maxOccurs
Create README.md document in the edu.cornell.mannlib.vitro.webapp.utils.configuration package
Split large class of unit tests into separate classes by functionality

* VIVO-1247, remove duplicate code used with ConfigurationBeanLoader.

Now that the @Property annotation includes cardinality parameters, we can remove a lot of duplicate code.

* VIVO-1246 Move unit tests to the new location.

* VIVO-1246 The documentation was in the wrong place.
 2017-01-03 12:12:11 -05:00
Graham Triggs
fc83c9f48d Remove unneeded calls to JSONObject.quote() 2016-12-29 22:26:08 +00:00
Graham Triggs
49c5b561f9 Migrate last dependencies on commons-lang 2.x 2016-12-24 12:27:26 +00:00
grahamtriggs
68a462b05a [VIVO-1312] Implement Linked Data Fragment Server (#53) 
* [VIVO-1312] Linked Data Fragments initial implementation

* [VIVO-1312] Use known ontologies in the prefixes config

* [VIVO-1312] Simplify SPARQL as when restricted to specific values, they don’t need ordering

* [VIVO-1312] Freemarker fixes

* [VIVO-1312] Remove blank nodes

* [VIVO-1312] Add access control header and standard prefixes for TPF

* [VIVO-1312] Render literals in form so that they will work on resubmit

* [VIVO-1312] Minor template update

* [VIVO-1312] Minor template update
 2016-12-23 21:55:08 +00:00
Graham Triggs
45bad8174d Replace old, undistributed CSV parser library with Commons CSV 2016-12-19 22:24:12 +00:00
Graham Triggs
17b323649d Remove unused Fedora connection 2016-12-19 19:08:13 +00:00
Graham Triggs
28c99c9408 Correct stage 1 migration - remove old JAI processor testers to fix the build 2016-12-19 11:08:57 +00:00
Graham Triggs
e24943aa50 Committed wrong files - removing incomplete image processor testers from image 2016-12-19 11:06:02 +00:00
Graham Triggs
aaa9ac6989 Migrating image processor testers for the ImageIO implementation - stage 1, remove the old testers from branch so build doesn’t break 2016-12-19 10:59:28 +00:00
Graham Triggs
6351e6ba1d Replace JAI image processor with IIO image processor and log warnings to update configuration 2016-12-19 10:52:29 +00:00
Graham Triggs
45eef7e9f7 Remove JAI dependencies from ImageIO Image Processor 2016-12-18 19:01:15 +00:00
Graham Triggs
39e0dc438c Update commons-lang to 3.4 (same as used by Jena 3.1.1) 2016-12-17 20:10:37 +00:00
Graham Triggs
56dc6cf750 Fix deprecated use of Freemarker 2016-12-17 18:23:02 +00:00
Graham Triggs
2efe4b4a87 Update ARQ URLs for Jena 3 2016-12-14 22:04:13 +00:00
Graham Triggs
1c0dcd040c Update Jena to 3.1.1, JFact to 4.0.4 and httpcomponents to 4.4 2016-12-14 19:23:54 +00:00
grahamtriggs
20ac3a3514 [VIVO-1063] Update jQuery to 1.12.4 and associated upgrades (#51) 
* Initial jQuery 1.12.4 upgrade

* Upgrade jQuery UI to 1.12.1

* Upgrade to qTip2

* Update property handling

* Update property handling

* Update jCrop script and fix rounding of floating point co-ordinates

* Fix missing confirmation message

* Return empty JSON so that jQuery doesn’t complain

* Fix JavaScript error
 2016-12-13 19:57:05 +00:00
Graham Triggs
2dd25a6e45 [VIVO-1289] Fix “add a new item of this type” 2016-11-14 19:09:35 +00:00
grahamtriggs
b97ee8dd26 [VIVO-1290] Multi-language improvements 
* fix hard coded label "more..."

* fix hard coded label "pages"

* fix hard coded labels "pages" and "to"

* fix some hard coded page titles and messages

* show class names in list views corresponding to preferred languages

* translate page titles of search result page and login page
 2016-11-14 14:45:40 +00:00
Stefan Wolff
71db92490d translate page titles of search result page and login page 2016-11-01 16:38:41 +01:00
Stefan Wolff
f518e78760 show class names in list views corresponding to preferred languages 2016-11-01 15:48:49 +01:00
Graham Triggs
ed4e42c98f Update version numbers 2016-10-31 19:46:39 +00:00
Graham Triggs
0957bcf758 [VIVO-1272] Inject JSP output to Freemarker instead of having a secondary layout 2016-10-05 22:36:26 +01:00
Graham Triggs
36db27b86c Refactor chaining to JSP pages to go through common methods. 2016-10-05 17:42:51 +01:00
Stefan Wolff
8c8985bdc2 fix some hard coded page titles and messages 2016-09-23 17:25:05 +02:00
Stefan Wolff
cedf17e1e6 fix hard coded label "more..." 2016-09-22 15:43:51 +02:00
grahamtriggs
d1a93743fc Merge pull request #49 from lawlesst/fix/filegraphsetup-turtle 
[VIVO-1271] FileGraphSetup loads .ttl extension with TURTLE format rather than N3.
 2016-09-21 19:10:20 +01:00
Graham Triggs
5af9f0b3a6 Revert "Split out selector implementation to address java compilation issue" 
This reverts commit 70ba4cedab.
 2016-09-19 13:43:34 +01:00
Graham Triggs
b103a7b3ce Revert "Split out selector implementation to address java compilation issue" 
This reverts commit c35690e5e3.
 2016-09-19 13:43:18 +01:00
Graham Triggs
c35690e5e3 Split out selector implementation to address java compilation issue 2016-09-18 21:19:21 +01:00
Graham Triggs
70ba4cedab Split out selector implementation to address java compilation issue 2016-09-18 21:03:24 +01:00
Graham Triggs
1a809c258d [VIVO-1270] Update JSON-LD serialisations 2016-09-09 19:56:50 +01:00
Graham Triggs
b8ef1046e2 [VIVO-1270] Updates to bulk handling 2016-09-09 18:53:16 +01:00
Graham Triggs
478ad12f15 [VIVO-1270] Replacement for BulkUpdateHandler - still need to test Union 2016-09-09 17:54:47 +01:00
Graham Triggs
50bef0d85e [VIVO-1270] Changes to adhere to the RDF 1.1 spec 2016-09-06 16:11:10 +01:00
Graham Triggs
a3c378bb25 [VIVO-1270] Initial commit of Jena 3 2016-09-02 19:59:10 +01:00
Ted Lawless
c77af47618 FileGraphSetup loads .ttl extensions with TURTLE format rather than N3. 2016-09-02 14:49:40 -04:00
Graham Triggs
591bca0c8d Make Idle Time configurable 2016-08-03 18:01:58 +01:00
Graham Triggs
04d361b80c Improve log usage in VitroBackgroundThread 2016-07-28 22:11:29 +01:00
Graham Triggs
2dbceba9f1 Make AltMetric enabled by default 2016-07-28 22:10:58 +01:00
Graham Triggs
83534d49be Minor HttpClient resource cleanups 2016-07-21 21:00:09 +01:00
Graham Triggs
809644f4b8 [VIVO-1082] Clean up pluginManagement 2016-07-06 06:47:56 +01:00
Graham Triggs
61f90dd1e6 [VIVO-1237] Add ability to generate meta tags 2016-07-05 17:52:03 +01:00
grahamtriggs
439b291628 [VIVO-1254] Merge pull request #44 from ardamose123/patch-1 
SPARQL query fix in `IndividualSDB` class
 2016-06-28 22:33:34 +01:00
Stephan Zednik
687d7e23ed combined conditional and removed commented code 2016-06-28 15:02:53 -06:00
Stephan Zednik
28f2f39be8 update containsNullOrEmpty() to check if list is empty 
Also updated the method to use Apache Commons StringUtil::isBlank(String) function to test for blank values in the list.
 2016-06-28 11:49:32 -06:00
Graham Triggs
4349724207 JavaDoc changes required to prevent the release process breaking 2016-06-23 20:08:14 +01:00
Graham Triggs
abac59cd18 Changes required for releasing to Maven Central 2016-06-23 18:54:13 +01:00