vivo/utilities/languageSupport/translateLabelsInOntology/label_inserter.rb

#!/usr/bin/ruby
=begin
--------------------------------------------------------------------------------

A utility that reads an RDF file, builds a model, sorts all of the URIs that have
labels, and associates those URIs with the labels in a supplied text file, one line
per label. 

These labels are assigned the language specified on the command line, and the 
resulting RDF statements are sent to standard output as N3.

On the command line provide the path to the RDF file, the path to the labels file,
and the desired language/locale. E.g.:

	label_inserter.rb ../../vivo-core-1.5-annotations.rdf labels.file es_ES

--------------------------------------------------------------------------------
=end

$: << File.dirname(File.expand_path(__FILE__))
require 'rubygems'
require 'rdf'
require 'label_common'

include RDF

class LabelStripper
  # ------------------------------------------------------------------------------------
  private
  # ------------------------------------------------------------------------------------

  #
  # Parse the arguments and complain if they don't make sense.
  #
  def sanity_check_arguments(args)
    raise "usage is: label_inserter.rb <rdf_file> <labels_input_file> <locale> <n3_output_file> [ok]" unless (4..5).include?(args.length)

	if args[4].nil?
	  ok = false
	elsif args[4].downcase == 'ok'
	  ok = true
	else
	  raise "fifth argument, if present, must be 'ok'"
    end
        
    rdf_file = args[0]
    raise "File '#{rdf_file}' does not exist." unless File.exist?(rdf_file)

    labels_input_file = args[1]
    raise "File '#{labels_input_file}' does not exist." unless File.exist?(labels_input_file)

    locale = args[2]
    raise "Locale should be like 'ab' or 'ab-CD'." unless /^[a-z]{2}(-[A-Z]{2})?$/ =~ locale

    n3_output_file = args[3]
    raise "File '#{n3_output_file}' already exists. specify 'ok' to overwrite it." if File.exist?(n3_output_file) && !ok

    return rdf_file, labels_input_file, locale, n3_output_file
  end
  
  # ------------------------------------------------------------------------------------
  public
  # ------------------------------------------------------------------------------------

  def initialize(args)
    @rdf_file, @labels_input_file, @locale, @n3_output_file = sanity_check_arguments(args)
  end
  
  def process(&filter)
    filter = filter || lambda{true}
    
    query = Query.new({
      :prop => {
        RDFS.label => :label,
        }
      })

    solutions = LabelCommon.new(@rdf_file).process(query, &filter)

    labels = IO.readlines(@labels_input_file)
    
    raise "Number of labels (#{labels.length}) doesn't match number of URIs (#{solutions.length})" unless labels.length == solutions.length

	graph = Graph.new
   	solutions.zip(labels).each do |data|
   		s = data[0].prop
   		p = RDFS.label
   		o = Literal.new(data[1].chomp, :language => @locale)
   		graph << Statement.new(s, p, o)
   	end

    File.open(@n3_output_file, 'w') do |f|
    	f.puts graph.dump(:ntriples)
	end
  end
end

#
#
# ------------------------------------------------------------------------------------
# Standalone calling.
#
# Do this if this program was called from the command line. That is, if the command
# expands to the path of this file.
# ------------------------------------------------------------------------------------
#

vivo_filter = lambda {|s| s.prop.start_with?("http://vivoweb.org/ontology/core#") && !s.label.to_s.strip.empty?}

if File.expand_path($0) == File.expand_path(__FILE__)
  stripper = LabelStripper.new(ARGV)
  stripper.process(&vivo_filter) 
end