diff --git a/productMods/WEB-INF/filegraph/tbox/agent.owl b/productMods/WEB-INF/filegraph/tbox/agent.owl
new file mode 100644
index 00000000..fea2366e
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/agent.owl
@@ -0,0 +1,960 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ topic weight measurement
+
+
+
+
+
+
+
+
+ expertise measurement
+
+
+
+
+
+
+
+
+ topic weight measurement process
+
+
+
+
+
+
+
+
+ expertise measurement process
+
+
+
+
+
+
+
+
+ experience
+
+
+
+
+
+
+
+
+ specialty
+
+
+
+
+
+
+
+
+
+ hospital units
+
+
+
+
+
+
+
+
+ hospitals
+
+
+
+
+
+
+
+
+ laboratories
+
+
+
+
+
+
+
+
+ technology transfer office
+
+ An organization that provides services for commercialization and licensing of technologies at an institution.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+ Technology Transfer Office
+
+
+
+
+
+
+
+
+ manufacturer role
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ GROUP: Role Branch
+ Manufacturer role is a role which inheres in a person or organization and which is realized by a manufacturing process.
+ OBI
+ With respect to The Accuri C6 Flow Cytometer System, the organization Accuri bears the role manufacturer role. With respect to a transformed line of tissue culture cells derived by a specific lab, the lab whose personnel isolated the cll line bears the role manufacturer role. With respect to a specific antibody produced by an individual scientist, the scientist who purifies, characterizes and distributes the anitbody bears the role manufacturer role.
+ manufacturer role
+
+
+
+
+
+
+
+
+
+ manufacturer
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A person or organization that has a manufacturer role
+
+
+
+
+
+
+
+
+ academic department
+
+ A distinct, usually specialized educational unit within an educational organization.
+ Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)
+
+
+
+
+
+
+
+
+ association
+
+ A formal organization of people or groups of people around a subject or practice.
+ A group of persons or organizations organized for a common purpose.
+ Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)
+
+
+
+
+
+
+
+
+ center
+
+ A place where a particular activity or service is concentrated.
+ Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center
+ An organization where a specified activity is concentrated.
+ Short Definition take from http://www.thefreedictionary.com/center.
+
+
+
+
+
+
+
+
+ clinical organization
+
+ Any organization that offers significant health services or routinely provides medical care to patients.
+ Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles
+ In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations "are" clinical and some "are" research organizations and that the distinction is important enough to warrant the additional class and class assertions
+
+
+
+
+
+
+
+
+ college
+
+ A primary academic unit within a University or a free-standing higher education organization without graduate degree programs
+ A primary academic unit within a University or a free-standing higher education organization without graduate degree programs.
+ College of Arts & Sciences; Ivy Tech Community College
+
+
+
+
+
+
+
+
+ committee
+
+ A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration
+ A group of people organized for a specific purpose, whose members are often selected from a larger group to serve for designated periods of time.
+ Curriculum Steering Committee; PhD Advisory Committee
+ There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important.
+
+
+
+
+
+
+
+
+ company
+
+ A legally-recognized business organization
+ A legally-recognized business organization.
+ from Wikipedia: "A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a "legal person". The name company arose because, at least originally, it represented or was owned by more than one real or legal person."
+
+
+
+
+
+
+
+
+ consortium
+
+ A group of independent organizations working together toward a common goal, under an expressed agreement.
+ Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio
+
+
+
+
+
+
+
+
+ core laboratory
+
+ A lab providing services such as training, protocols, or access to instruments or software
+
+
+
+
+
+
+
+ department
+
+ A unit within a larger organization that addresses a specific subject or area of activity.
+ Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division.
+ Legal (department within a company); Use for any non-academic department
+
+
+
+
+
+
+
+
+ division
+
+
+ A major unit or section within a larger organization.
+ Cardiovascular Medicine (division within medicine)
+ Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department.
+
+
+
+
+
+
+
+
+ extension unit
+
+ A unit devoted primarily to extension activities, whether for outreach or research
+ A unit devoted primarily to extension activities, whether for outreach or research.
+ Alachua County Extension Office
+
+
+
+
+
+
+
+
+ foundation
+
+ An institution founded with an endowment to support educational, research, artistic or other charitable activities.
+ Definition take from: http://dictionary.reference.com/browse/foundation.
+ The Ford Foundation
+
+
+
+
+
+
+
+
+ funding organization
+
+ A defined class of organizations that fund Grants
+ An organization that provides financial support to individuals or organizations to carry out specified activities.
+ National Institute of Health (NIH)
+
+
+
+
+
+
+
+
+ government agency
+
+ A unit of government responsible for oversight and regulation of certain activities or the administration and provision of specific services.
+ Definition take from: http://en.wikipedia.org/wiki/Government_agency.
+ United States Library of Congress
+
+
+
+
+
+
+
+
+ graduate student
+
+ A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree.
+
+
+
+
+
+
+
+ hospital
+
+ An institution that provides medical, surgical, psychiatric or nursing care.
+ Definition take from: http://dictionary.reference.com/browse/hospital.
+ Shands at the University of Florida
+
+
+
+
+
+
+
+
+ institute
+
+ An Institute normally has a research focus but may also fulfill instructional or outreach roles
+ An organization founded to pursue or promote certain research, educational or public policy interests or activities.
+ Institute for Fundamental Theory
+
+
+
+
+
+
+
+
+ laboratory
+
+ An organization unit that facilitates or conduits observation, testing, experimentation, or research in a field of study or practice.
+ An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials
+
+
+
+
+
+
+
+
+ library
+
+ An organization maintaining one or more collections of physical and/or electronic information resources for access or lending.
+ Marston Science Library
+ Used information from this definition: http://dictionary.reference.com/browse/library.
+
+
+
+
+
+
+
+
+ museum
+
+ An organization devoted to the acquisition, conservation, study, exhibition, and educational interpretation of objects having scientific, historical, cultural or artistic value.
+ Definition was take from here: http://dictionary.reference.com/browse/museum
+ The Getty Museum
+
+
+
+
+
+
+
+
+ private company
+
+ A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company.
+ Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html
+ Publix Super Markets; Ernst & Young; PricewaterhouseCoopers
+
+
+
+
+
+
+
+
+ program
+
+ A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)
+ An ongoing academic initiative not formalized with department or division status.
+
+
+
+
+
+
+
+
+ publisher (vivo)
+
+ A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc.
+ Definition found here: http://dictionary.reference.com/browse/publisher
+ Elsevier; Harper & Row; Indiana University Press
+
+
+
+
+
+
+
+
+ research organization
+
+ Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles
+
+
+
+
+
+
+
+
+ school
+
+ An institution for instruction in a particular skill or field.
+ Definition take from here: http://dictionary.reference.com/browse/school.
+ School of Architecture; School of Music
+
+
+
+
+
+
+
+
+ service providing lab
+
+ A laboratory that provides services
+ Ideally a defined class -- a Laboratory the provides some Service via the property
+
+
+
+
+
+
+
+
+ student
+
+ A person who is enrolled in an educational institution.
+ Use only if no specific subclasses of core:Student describe the person.
+
+
+
+
+
+
+
+ student organization
+
+ A student organization is an organization, operated by students at a university, whose membership normally consists only of students.
+ Dancin' Gators
+ Definition take from here: http://en.wikipedia.org/wiki/Student_society
+
+
+
+
+
+
+
+
+ team
+
+ A group of people working together.
+ An informal organization brought together for the purposes of a project or event
+ VIVO Outreach Team; VIVO Ontology Team
+
+
+
+
+
+
+
+
+ undergraduate student
+
+ A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate.
+
+
+
+
+
+
+
+ university
+
+ An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education.
+ Definition taken from: http://en.wikipedia.org/wiki/University
+ University of Florida; Washington University in St. Louis
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ agent (foaf)
+
+
+ Agents are things that do stuff
+ An agent
+ PERSON: Scott Hoffmann
+ Things that do stuff.
+ agent
+ see: http://xmlns.com/foaf/spec/#term_Agent
+ Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind.
+
+
+
+
+
+
+
+ group (foaf)
+
+ A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions).
+ A collection of individual agents.
+ A group
+ A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event.
+
+see: http://xmlns.com/foaf/spec/#term_Group
+ PERSON: Scott Hoffmann
+ group
+
+
+
+
+
+
+
+ organization
+
+
+ A generic class encompassing several types of organizations.
+ A kind of Agent corresponding to social instititutions such as companies, societies etc.
+ An organization
+ Only use if no specific subclasses of foaf:organization desribe the organization.
+ PERSON: Scott Hoffmann
+ This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available.
+ organization
+ Ued to describe an organization related to bibliographic items such as a publishing company, etc.
+
+
+
+
+
+
+
+ person
+
+
+ A person
+ An instance of a human being (Homo sapiens)
+ PERSON: Melissa Haendel
+ The most general classification of a person
+ person
+
+
+
+
+
+
+
+
+
+
+
+
+
+ american board of allergy and immunology
+
+
+
+
+
+
+
+
+ american board of anesthesiology
+
+
+
+
+
+
+
+
+ american board of colon and rectal surgery
+
+
+
+
+
+
+
+
+ american board of dermatology
+
+
+
+
+
+
+
+
+ american board of emergency medicine
+
+
+
+
+
+
+
+
+ american board of family medicine
+
+
+
+
+
+
+
+
+ american board of internal medicine
+
+
+
+
+
+
+
+
+ american board of medical genetics
+
+
+
+
+
+
+
+
+ american board of neurological surgery
+
+
+
+
+
+
+
+
+ american board of nuclear medicine
+
+
+
+
+
+
+
+
+ american board of obstetrics and gynecology
+
+
+
+
+
+
+
+
+ american board of ophthalmology
+
+
+
+
+
+
+
+
+ american board of orthopaedic surgery
+
+
+
+
+
+
+
+
+ american board of otolaryngology
+
+
+
+
+
+
+
+
+ american board of pathology
+
+
+
+
+
+
+
+
+ american board of pediatrics
+
+
+
+
+
+
+
+
+ american board of physical medicine and rehabilitation
+
+
+
+
+
+
+
+
+ american board of plastic surgery
+
+
+
+
+
+
+
+
+ american board of preventive medicine
+
+
+
+
+
+
+
+
+ american board of psychiatry and neurology
+
+
+
+
+
+
+
+
+ american board of radiology
+
+
+
+
+
+
+
+
+ american board of surgery
+
+
+
+
+
+
+
+
+ american board of thoracic surgery
+
+
+
+
+
+
+
+
+ american board of urology
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/bfo-bridge.owl b/productMods/WEB-INF/filegraph/tbox/bfo-bridge.owl
new file mode 100644
index 00000000..d3f42a1a
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/bfo-bridge.owl
@@ -0,0 +1,437 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ entity
+
+
+
+
+
+
+
+ continuant
+
+
+
+
+
+
+
+
+ occurrent
+
+
+
+
+
+
+
+
+ independent_continuant
+
+
+
+
+
+
+
+
+ spatial region
+
+
+
+
+
+
+
+
+ temporal region
+
+
+
+
+
+
+
+
+ process
+
+
+
+
+
+
+
+
+ disposition (bfo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ quality
+
+
+
+
+
+
+
+
+ specifically_dependent_continuant
+
+
+
+
+
+
+
+
+ role (bfo)
+
+
+
+
+
+
+
+
+ site
+
+
+
+
+
+
+
+
+ generically dependent continuant
+
+
+
+
+
+
+
+
+ function
+
+
+
+
+
+
+
+
+ one-dimensional temporal region
+
+
+
+
+
+
+
+
+ material_entity
+
+
+
+
+
+
+
+
+ immaterial entity
+
+
+
+
+
+
+
+
+ zero-dimensional temporal region
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ administrator role
+
+
+
+
+
+
+
+
+ advising process
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ attending process
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ editor role
+
+
+
+
+
+
+
+
+ educational process
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ organizer role
+
+
+
+
+
+
+
+
+ organizing process
+
+
+
+
+
+
+
+
+ outreach provider role
+
+
+
+
+
+
+
+
+ presenter role
+
+
+
+
+
+
+
+
+ presenting process
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ reviewer role
+
+
+
+
+
+
+
+
+ teacher role
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/bfo.owl b/productMods/WEB-INF/filegraph/tbox/bfo.owl
new file mode 100644
index 00000000..7bdff289
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/bfo.owl
@@ -0,0 +1,32 @@
+
+
+
+
+
+
+ realizable entity
+
+
+ (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002]
+ (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002]
+ RealizableEntity
+ All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])
+ To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])
+ realizable
+ the disposition of this piece of metal to conduct electricity.
+ the disposition of your blood to coagulate
+ the function of your reproductive organs
+ the role of being a doctor
+ the role of this boundary to delineate where Utah and Colorado meet
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/bfo11.owl b/productMods/WEB-INF/filegraph/tbox/bfo11.owl
deleted file mode 100644
index 7246bf0c..00000000
--- a/productMods/WEB-INF/filegraph/tbox/bfo11.owl
+++ /dev/null
@@ -1,554 +0,0 @@
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-]>
-
-
-
- Basic Formal Ontology (BFO)
- Holger Stenzhorn
- Andrew Spear
- Pierre Grenon
- Alan Ruttenberg
- Institute for Formal Ontology and Medical Information Science (IFOMIS)
- http://creativecommons.org/licenses/by/3.0
- &base;
- application/rdf+xml
- en
- Barry Smith: "Against Fantology"
- Barry Smith: "Beyond Concepts: Ontology as Reality Representation"
- Pierre Grenon and Barry Smith: "SNAP and SPAN: Towards Geospatial Dynamics"
- Pierre Grenon, Barry Smith and Louis Goldberg: "Biodynamic Ontology: Applying BFO in the Biomedical Domain"
- Barry Smith and Pierre Grenon: "The Cornucopia of Formal Ontological Relations"
- Barry Smith: "Basic Tools of Formal Ontology"
- Pierre Grenon: "Spatio-temporality in Basic Formal Ontology: SNAP and SPAN, Upper-Level Ontology, and Framework for Formalization"
- Pierre Grenon: "BFO in a Nutshell: A Bi-categorial Axiomatization of BFO and Comparison with DOLCE"
- Pierre Grenon: "Nuts in BFO's Nutshell: Revisions to the Bi-categorial Axiomatization of BFO"
- 1.1
-
-
-
-
-
-
-
-
-
-
-
-
- entity
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- continuant
- Definition: An entity [bfo:Entity] that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.
- Examples: a heart, a person, the color of a tomato, the mass of a cloud, a symphony orchestra, the disposition of blood to coagulate, the lawn and atmosphere in front of our building
- Synonyms: endurant
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- dependent_continuant
- Definition: A continuant [snap:Continuant] that is either dependent on one or other independent continuant [snap:IndependentContinuant] bearers or inheres in or is borne by other entities.
-
-
-
-
-
-
- disposition
- Definition: A realizable entity [snap:RealizableEntity] that essentially causes a specific process or transformation in the object [snap:Object] in which it inheres, under specific circumstances and in conjunction with the laws of nature. A general formula for dispositions is: X (object [snap:Object] has the disposition D to (transform, initiate a process) R under conditions C.
- Examples: the disposition of vegetables to decay when not refrigerated, the disposition of a vase to brake if dropped, the disposition of blood to coagulate, the disposition of a patient with a weakened immune system to contract disease, the disposition of metal to conduct electricity.
-
-
-
-
-
-
- fiat_object_part
- Definition: A material entity [snap:MaterialEntity] that is part of an object [snap:Object] but is not demarcated by any physical discontinuities.
- Examples: upper and lower lobes of the left lung, the dorsal and ventral surfaces of the body, the east side of Saarbruecken, the lower right portion of a human torso
- Synonyms: fiat substance part
-
-
-
-
-
-
- function
- Definition: A realizable entity [snap:RealizableEntity] the manifestation of which is an essentially end-directed activity of a continuant [snap:Continuant] entity in virtue of that continuant [snap:Continuant] entity being a specific kind of entity in the kind or kinds of contexts that it is made for.
- Examples: the function of a birth canal to enable transport, the function of the heart in the body: to pump blood, to receive de-oxygenated and oxygenated blood, etc., the function of reproduction in the transmission of genetic material, the digestive function of the stomach to nutriate the body, the function of a hammer to drive in nails, the function of a computer program to compute mathematical equations, the function of an automobile to provide transportation, the function of a judge in a court of law
-
-
-
-
-
- generically_dependent_continuant
- Definition: A continuant [snap:Continuant] that is dependent on one or other independent continuant [snap:IndependentContinuant] bearers. For every instance of A requires some instance of (an independent continuant [snap:IndependentContinuant] type) B but which instance of B serves can change from time to time.
- Examples: a certain PDF file that exists in different and in several hard drives
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- independent_continuant
- Definition: A continuant [snap:Continuant] that is a bearer of quality [snap:Quality] and realizable entity [snap:RealizableEntity] entities, in which other entities inhere and which itself cannot inhere in anything.
- Examples: an organism, a heart, a leg, a person, a symphony orchestra, a chair, the bottom right portion of a human torso, the lawn and atmosphere in front of our building
- Synonyms: substantial entity
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- material_entity
- Definition: An independent continuant [snap:IndependentContinuant] that is spatially extended whose identity is independent of that of other entities and can be maintained through time. Note: Material entity [snap:MaterialEntity] subsumes object [snap:Object], fiat object part [snap:FiatObjectPart], and object aggregate [snap:ObjectAggregate], which assume a three level theory of granularity, which is inadequate for some domains, such as biology.
- Examples: collection of random bacteria, a chair, dorsal surface of the body
-
-
-
-
-
-
- object
- Definition: A material entity [snap:MaterialEntity] that is spatially extended, maximally self-connected and self-contained (the parts of a substance are not separated from each other by spatial gaps) and possesses an internal unity. The identity of substantial object [snap:Object] entities is independent of that of other entities and can be maintained through time.
- Examples: an organism, a heart, a chair, a lung, an apple
- Synonyms: substance
-
-
-
-
-
-
- object_aggregate
- Definition: A material entity [snap:MaterialEntity] that is a mereological sum of separate object [snap:Object] entities and possesses non-connected boundaries.
- Examples: a heap of stones, a group of commuters on the subway, a collection of random bacteria, a flock of geese, the patients in a hospital
- Synonyms: substance aggregate
-
-
-
-
-
-
-
-
- object_boundary
- Definition: An independent continuant [snap:IndependentContinuant] that is a lower dimensional part of a spatial entity, normally a closed two-dimensional surface. Boundaries are those privileged parts of object [snap:Object] entities that exist at exactly the point where the object [snap:Object] is separated off from the rest of the existing entities in the world.
- Examples: the surface of the skin, the surface of the earth, the surface of the interior of the stomach, the outer surface of a cell or cell wall
- Synonyms: substance boundary
- Comment: Boundaries are theoretically difficult entities to account for, however the intuitive notion of a physical boundary as a surface of some sort (whether inside or outside of a thing) will generally serve as a good guide for the use of this universal.
-
-
-
-
-
-
-
- one_dimensional_region
- Definition: A spatial region [snap:SpatialRegion] with one dimension.
- Examples: the part of space that is a line stretching from one end of absolute space to the other, an edge of a cube-shaped part of space
-
-
-
-
-
- quality
- Definition: A specifically dependent continuant [snap:SpecificallyDependentContinuant] that is exhibited if it inheres in an entity or entities at all (a categorical property).
- Examples: the color of a tomato, the ambient temperature of air, the circumference of a waist, the shape of a nose, the mass of a piece of gold, the weight of a chimpanzee
-
-
-
-
-
- realizable_entity
- Definition: A specifically dependent continuant [snap:SpecificallyDependentContinuant] that inheres in continuant [snap:Continuant] entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.
- Examples: the role of being a doctor, the function of the reproductive organs, the disposition of blood to coagulate, the disposition of metal to conduct electricity
- Comment: If a realizable entity [snap:RealizableEntity] inheres in a continuant [snap:Continuant], this does not imply that it is actually realized.
-
-
-
-
-
-
- role
- Definition: A realizable entity [snap:RealizableEntity] the manifestation of which brings about some result or end that is not essential to a continuant [snap:Continuant] in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant [snap:Continuant] in some kinds of natural, social or institutional contexts.
- Examples: the role of a person as a surgeon, the role of a chemical compound in an experiment, the role of a patient relative as defined by a hospital administrative form, the role of a woman as a legal mother in the context of system of laws, the role of a biological grandfather as legal guardian in the context of a system of laws, the role of ingested matter in digestion, the role of a student in a university
-
-
-
-
-
-
-
-
- site
- Definition: An independent continuant [snap:IndependentContinuant] consisting of a characteristic spatial shape in relation to some arrangement of other continuant [snap:Continuant] entities and of the medium which is enclosed in whole or in part by this characteristic spatial shape. Site [snap:Site] entities are entities that can be occupied by other continuant [snap:Continuant] entities.
- Examples: a particular room in a particular hospital, Maria's nostril or her intestines for a variety of bacteria.
- Comment: An instance of Site [snap:Site] is a mixture of independent continuant [snap:IndependentContinuant] entities which act as surrounding environments for other independent continuant [snap:IndependentContinuant] entities, most importantly for instances of object [snap:Object]. A site [snap:Site] is typically made of object [snap:Object] or fiat object part [snap:FiatObjectPart] entities and a surrounding medium in which is found an object [snap:Object] occupying the site [snap:Site]. Independent continuant [snap:IndependentContinuant] entities may be associated with others (which, then, are sites) through a relation of "occupation". That relation is connected to, but distinct from, the relation of spatial location. Site [snap:Site] entities are not to be confused with spatial region [snap:SpatialRegion] entities. In BFO, site [snap:Site] allows for a so-called relational view of space which is different from the view corresponding to the class spatial region [snap:SpatialRegion] (see the comment on this class).
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- spatial_region
- Definition: A continuant [snap:Continuant] that is neither bearer of quality [snap:Quality] entities nor inheres in any other entities.
- Examples: the sum total of all space in the universe, parts of the sum total of all space in the universe
- Comment: An instance of spatial region [snap:SpatialRegion] is a part of space. All parts of space are spatial region [snap:SpatialRegion] entities and only spatial region [snap:SpatialRegion] entities are parts of space. Space is the entire extent of the spatial universe, a designated individual, which is thus itself a spatial region [snap:SpatialRegion].
- Comment: All instances of continuant [snap:Continuant] are spatial entities, that is, they enter in the relation of (spatial) location with spatial region [snap:SpatialRegion] entities. As a particular case, the exact spatial location of a spatial region [snap:SpatialRegion] is this region itself.
- Comment: Space and spatial region [snap:SpatialRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of space is sometimes called "absolutist" or "the container view". In BFO, the class site [snap:Site] allows for a so-called relational view of space, that is to say, a view according to which spatiality is a matter of relative location between entities and not a matter of being tied to space. The bridge between these two views is secured through the fact that while instances of site [snap:Site] are not spatial region [snap:SpatialRegion] entities, they are nevertheless spatial entities.
-
-
-
-
-
-
-
-
-
-
-
-
-
- specifically_dependent_continuant
- Definition: A continuant [snap:Continuant] that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.
- Examples: the mass of a cloud, the smell of mozzarella, the liquidity of blood, the color of a tomato, the disposition of fish to decay, the role of being a doctor, the function of the heart in the body: to pump blood, to receive de-oxygenated and oxygenated blood, etc.
- Synonyms: property, trope, mode
-
-
-
-
-
-
-
- three_dimensional_region
- Definition: A spatial region [snap:SpatialRegion] with three dimensions.
- Examples: a cube-shaped part of space, a sphere-shaped part of space
-
-
-
-
-
-
-
- two_dimensional_region
- Definition: A spatial region [snap:SpatialRegion] with two dimensions.
- Examples: the surface of a cube-shaped part of space, the surface of a sphere-shaped part of space, the surface of a rectilinear planar figure-shaped part of space
-
-
-
-
-
-
-
- zero_dimensional_region
- Definition: A spatial region [snap:SpatialRegion] with no dimensions.
- Examples: a point
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- connected_spatiotemporal_region
- Definition: A space time region [span:SpaceTimeRegion] that has temporal and spatial dimensions such that all points within the spatiotemporal region are mediately or immediately connected to all other points within the same space time region [span:SpaceTimeRegion].
- Examples: the spatial and temporal location of an individual organism's life, the spatial and temporal location of the development of a fetus
-
-
-
-
-
-
-
-
-
-
-
-
-
- connected_temporal_region
- Definition: A temporal region [span:TemporalRegion] every point of which is mediately or immediately connected with every other point of which.
- Examples: the 1970s years, the time from the beginning to the end of a heart attack, the time taken up by cellular meiosis
-
-
-
-
-
-
-
-
- fiat_process_part
- Definition: A processual entity [span:ProcessualEntity] that is part of a process but that does not have bona fide beginnings and endings corresponding to real discontinuities.
- Examples: chewing during a meal, the middle part of a rainstorm, the worst part of a heart-attack, the most interesting part of Van Gogh's life
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- occurrent
- Definition: An entity [bfo:Entity] that has temporal parts and that happens, unfolds or develops through time. Sometimes also called perdurants.
- Examples: the life of an organism, a surgical operation as processual context for a nosocomical infection, the spatiotemporal context occupied by a process of cellular meiosis, the most interesting part of Van Gogh's life, the spatiotemporal region occupied by the development of a cancer tumor
- Synonyms: perdurant
-
-
-
-
-
-
-
-
- process
- Definition: A processual entity [span:ProcessualEntity] that is a maximally connected spatiotemporal whole and has bona fide beginnings and endings corresponding to real discontinuities.
- Examples: the life of an organism, the process of sleeping, the process of cell-division
-
-
-
-
-
-
-
-
- process_aggregate
- Definition: A processual entity [span:ProcessualEntity] that is a mereological sum of process [span:Process] entities and possesses non-connected boundaries.
- Examples: the beating of the hearts of each of seven individuals in the room, the playing of each of the members of an orchestra, a process of digestion and a process of thinking taken together
-
-
-
-
-
-
-
-
- process_boundary
- Definition: A processual entity [span:ProcessualEntity] that is the fiat or bona fide instantaneous temporal process boundary.
- Examples: birth, death, the forming of a synapse, the onset of REM sleep, the detaching of a finger in an industrial accident, the final separation of two cells at the end of cell-division, the incision at the beginning of a surgery
-
-
-
-
-
-
-
-
- processual_context
- Definition: An occurrent [span:Occurrent] consisting of a characteristic spatial shape inhering in some arrangement of other occurrent [span:Occurrent] entities. processual context [span:ProcessualContext] entities are characteristically entities at or in which other occurrent [span:Occurrent] entities can be located or occur.
- Examples: The processual context for a given manipulation occurring as part of an experiment is made of processual entities which occur in parallel, are not necessarily all parts of the experiment themselves and may involve continuant [snap:Continuant] entities which are in the spatial vicinity of the participants in the experiment.
- Comment: An instance of a processual context [span:ProcessualContext] is a mixture of processual entity [span:ProcessualEntity] which stand as surrounding environments for other processual entity [span:ProcessualEntity] entities. The class processual context [span:ProcessualContext] is the analogous among occurrent [span:Occurrent] entities to the class site [snap:Site] among continuant [snap:Continuant] entities.
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- processual_entity
- Definition: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.
- Examples: the life of an organism, the process of meiosis, the course of a disease, the flight of a bird
-
-
-
-
-
- scattered_spatiotemporal_region
- Definition: A space time region [span:SpaceTimeRegion] that has spatial and temporal dimensions and every spatial and temporal point of which is not connected with every other spatial and temporal point of which.
- Examples: the space and time occupied by the individual games of the World Cup, the space and time occupied by the individual liaisons in a romantic affair
-
-
-
-
-
- scattered_temporal_region
- Definition: A temporal region [span:TemporalRegion] every point of which is not mediately or immediately connected with every other point of which.
- Examples: the time occupied by the individual games of the World Cup, the time occupied by the individual liaisons in a romantic affair
-
-
-
-
-
- spatiotemporal_instant
- Definition: A connected space time region [span:ConnectedSpaceTimeRegion] at a specific moment.
- Examples: the space time region occupied by a single instantaneous temporal slice (part) of a process
-
-
-
-
-
- spatiotemporal_interval
- Definition: A connected space time region [span:ConnectedSpaceTimeRegion] that endures for more than a single moment of time.
- Examples: the space time region occupied by a process or by a fiat processual part
-
-
-
-
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-
-
-
-
-
-
-
-
-
- spatiotemporal_region
- Definition: An occurrent [span:Occurrent] at or in which processual entity [span:ProcessualEntity] entities can be located.
- Examples: the spatiotemporal region occupied by a human life, the spatiotemporal region occupied by the development of a cancer tumor, the spatiotemporal context occupied by a process of cellular meiosis
- Comment: An instance of the spatiotemporal region [span:SpatiotemporalRegion] is a part of spacetime. All parts of spacetime are spatiotemporal region [span:SpatiotemporalRegion] entities and only spatiotemporal region [span:SpatiotemporalRegion] entities are parts of spacetime. In particular, neither spatial region [snap:SpatialRegion] entities nor temporal region [span:TemporalRegion] entities are in BFO parts of spacetime. Spacetime is the entire extent of the spatiotemporal universe, a designated individual, which is thus itself a spatiotemporal region [span:SpatiotemporalRegion]. Spacetime is among occurrents the analogous of space among continuant [snap:Continuant] entities.
- Comment: All instances of occurrent [span:Occurrent] are spatiotemporal entities, that is, they enter in the relation of (spatiotemporal) location with spatiotemporal region [span:SpatiotemporalRegion] entities. As a particular case, the exact spatiotemporal location of a spatiotemporal region [span:SpatiotemporalRegion] is this region itself.
- Comment: Spacetime and spatiotemporal region [span:SpatiotemporalRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of spacetime can be called "absolutist" or "the container view". In BFO, the class processual context [span:ProcessualContext] allows for a so-called relational view of spacetime, that is to say, a view according to which spatiotemporality is a matter of relative location between entities and not a matter of being tied to spacetime. In BFO, the bridge between these two views is secured through the fact that instances of processual context [span:ProcessualContext] are too spatiotemporal entities.
-
-
-
-
-
- temporal_instant
- Definition: A connected temporal region [span:ConnectedTemporalRegion] comprising a single moment of time.
- Examples: right now, the moment at which a finger is detached in an industrial accident, the moment at which a child is born, the moment of death
-
-
-
-
-
- temporal_interval
- Definition: A connected temporal region [span:ConnectedTemporalRegion] lasting for more than a single moment of time.
- Examples: any continuous temporal duration during which a process occurs
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- temporal_region
- Definition: An occurrent [span:Occurrent] that is part of time.
- Examples: the time it takes to run a marathon, the duration of a surgical procedure, the moment of death
- Comment: An instance of temporal region [span:TemporalRegion] is a part of time. All parts of time are temporal region [span:TemporalRegion] entities and only temporal region [span:TemporalRegion] entities are parts of time. Time is the entire extent of the temporal universe, a designated individual, which is thus a temporal region itself.
- Comment: All instances of occurrent [span:Occurrent] are temporal entities, that is, they enter in the relation of (temporal) location with temporal region [span:TemporalRegion] entities. As a particular case, the exact spatiotemporal location of a temporal region [span:TemporalRegion] is this region itself. Continuant [snap:Continuant] entities are not temporal entities in the technical sense just explained; they are related to time in a different way, not through temporal location but through a relation of existence at a time or during a period of time (see continuant [snap:Continuant].
- Comment: Time and temporal region [span:TemporalRegion] entities are entities in their own rights which exist independently of any entities which can be located at them. This view of time can be called "absolutist" or "the container view" in analogy to what is traditionally the case with space (see spatial region [snap:SpatialRegion].
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/clinical.owl b/productMods/WEB-INF/filegraph/tbox/clinical.owl
new file mode 100644
index 00000000..cb4c209d
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/clinical.owl
@@ -0,0 +1,249 @@
+
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+
+
+ human study
+
+ A clinical trial.
+ OCRe
+ PERSON: Melissa Haendel
+ Research project that uses or collects measurements or assessments about humans.
+ This should be imported from OCRE- but they currently have no generic human study type. Def is modified.
+ human study
+
+
+
+
+
+
+
+
+ clinical trial
+
+
+
+
+
+
+
+
+
+
+
+
+ A clinical trial to evaluate the efficacy of a new drug.
+ An interventional study that contains a set of procedures in medical research and drug development that are conducted to allow safety (or more specifically, information about adverse drug reactions and adverse effects of other treatments) and efficacy data to be collected for health interventions (e.g., drugs, diagnostics, devices, therapy protocols) that is performed over phases.
+ PERSON: Nicole Vasilevsky
+ http://en.wikipedia.org/wiki/Clinical_trial
+
+
+
+
+
+
+ phase (ocre)
+
+ Phase describes the level of a trial required of drugs before (and after) they are routinely used in clinical practice:
+- Phase I trials assess toxic effects on humans (not many people participate in them, and usually without controls);
+- Phase ll trials assess therapeutic benefit (usually involving a few hundred people, usually with controls, but not always);
+- Phase III trials compare the new treatment against standard (or placebo) treatment (usually a full randomised controlled trial). At this point, a drug can be approved for community use.
+- Phase IV monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration]
+
+A trial can be of a combination phase (e.g., I/II).
+The concept of phase is not applicable to trials studying certain interventions (e.g., device, procedure, behavioral)
+ Simona
+
+
+
+
+
+
+
+ phase 0
+
+ A Phase 0 trial is an exploratory trial involving very limited human exposure, with no therapeutic or diagnostic intent (e.g., screening study, microdose study). [http://prsinfo.clinicaltrials.gov/definitions.html]
+ Simona
+
+
+
+
+
+
+
+ phase 1
+
+ A Phase I trial assesses toxic effects on humans (not many people participate, and usually without controls) [Glossary of Terms in The Cochrane Collaboration]
+ Simona
+
+
+
+
+
+
+
+ phase 2
+
+ A Phase ll trial assesses therapeutic benefit (usually involving a few hundred people, usually with controls, but not always) [Glossary of Terms in The Cochrane Collaboration]
+ Simona
+
+
+
+
+
+
+
+ phase 3
+
+ A Phase III trial compares the new treatment against standard (or placebo) treatment (usually a full
+randomised controlled trial). At this point, a drug can be approved for community use. [Glossary of Terms in The Cochrane Collaboration]
+ Simona
+
+
+
+
+
+
+
+ phase 4
+
+ A Phase IV study monitors a new treatment in the community, often to evaluate longterm safety and effectiveness. [Glossary of Terms in The Cochrane Collaboration]
+ Simona
+
+
+
+
+
+
+
+ single group study
+
+ A single group study is an interventional study that has only a single allocation group and no contemporaneuos comparison group.
+A study in which an individual acts has his/her own comparison does not fall into this category, since an individual is not a group.
+ Simona
+ Simona: to be reviewed
+
+
+
+
+
+
+
+ clinical role
+
+ A role of observing or treating patients
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/contact-vcard.owl b/productMods/WEB-INF/filegraph/tbox/contact-vcard.owl
new file mode 100644
index 00000000..c719bdf7
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/contact-vcard.owl
@@ -0,0 +1,2377 @@
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+
+
+
+
+
+
+
+
+
+
+ acquaintance
+
+
+
+
+
+
+
+
+ address
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+ To specify the components of the delivery address for the vCard object
+
+
+
+
+
+
+
+ addressing
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ These types are concerned with information related to the delivery addressing or label for the vCard object
+
+
+
+
+
+
+
+ agent (vcard c)
+
+
+
+
+
+
+
+
+ calendar
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+
+ calendar busy (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the URI for the busy time associated with the object that the vCard represents.
+Was called FBURI in vCard
+
+
+
+
+
+
+
+ calendar link (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the URI for a calendar associated with the object represented by the vCard.
+Was called CALURI in vCard.
+
+
+
+
+
+
+
+ calendar request (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the calendar user address [RFC5545] to which a scheduling request [RFC5546] should be sent for the object represented by the vCard.
+Was called CALADRURI in vCard
+
+
+
+
+
+
+
+ category (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify application category information about the vCard, also known as tags. This was called CATEGORIES in vCard.
+
+
+
+
+
+
+
+ cell
+
+ Also called mobile telephone
+
+
+
+
+
+
+
+ child
+
+
+
+
+
+
+
+
+ code (vcard c)
+ Contains all the Code related Classes that are used to indicate vCard Types
+
+
+
+
+
+
+
+ colleague
+
+
+
+
+
+
+
+
+ communication
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ These properties describe information about how to communicate with the object the vCard represents
+
+
+
+
+
+
+
+ contact (vcard c)
+
+
+
+
+
+
+
+
+ coresident
+
+
+
+
+
+
+
+
+ coworker
+
+
+
+
+
+
+
+
+ crush
+
+
+
+
+
+
+
+
+ date
+
+
+
+
+
+
+
+
+ email (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the electronic mail address for communication with the object the vCard represents
+
+
+
+
+
+
+
+ emergency
+
+
+
+
+
+
+
+
+ explanatory
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ These properties are concerned with additional explanations, such as that related to informational notes or revisions specific to the vCard
+
+
+
+
+
+
+
+ fax
+
+
+
+
+
+
+
+
+ female (vcard)
+
+
+
+
+
+
+
+
+ formatted name
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ Specifies the formatted text corresponding to the name of the object the vCard represents
+
+
+
+
+
+
+
+ friend
+
+
+
+
+
+
+
+
+ gender (vcard c)
+
+
+
+
+
+
+
+
+ geo (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ Used to indicate global positioning information that is specific to an address
+
+
+
+
+
+
+
+ geographical
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+ These properties are concerned with information associated with geographical positions or regions associated with the object the vCard represents
+
+
+
+
+
+
+
+ group (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+ Defines all the properties required to be a Group of Individuals or Organizations
+
+
+
+
+
+
+
+ home
+
+ This implies that the property is related to an individual's personal life
+
+
+
+
+
+
+
+ identification
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ These types are used to capture information associated with the identification and naming of the entity associated with the vCard
+
+
+
+
+
+
+
+ individual
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+ Defines all the properties required to be an Individual
+
+
+
+
+
+
+
+ messaging
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the URI for instant messaging and presence protocol communications with the object the vCard represents.
+Was called IMPP in vCard.
+
+
+
+
+
+
+
+ key (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+ kin
+
+
+
+
+
+
+
+
+ vcard kind
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+ The parent class for all vCard Objects
+
+
+
+
+
+
+
+ language
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the language(s) that may be used for contacting the entity associated with the vCard.
+
+
+
+
+
+
+
+ location (vcard c)
+
+
+ Defines all the properties required to be a Location
+
+
+
+
+
+
+
+ logo (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify a graphic image of a logo associated with the object the vCard represents
+
+
+
+
+
+
+
+ male (vcard c)
+
+
+
+
+
+
+
+
+ me
+
+
+
+
+
+
+
+
+ met
+
+
+
+
+
+
+
+
+ muse
+
+
+
+
+
+
+
+
+ name
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+
+
+
+
+ 0
+
+
+
+
+
+
+
+ Specifies the components of the name of the object the vCard represents
+
+
+
+
+
+
+
+ neighbor
+
+
+
+
+
+
+
+
+ nickname
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ Specifies the text corresponding to the nickname of the object the vCard represents
+
+
+
+
+
+
+
+ none
+
+
+
+
+
+
+
+
+ note (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify supplemental information or a comment that is associated with the vCard
+
+
+
+
+
+
+
+ organization (vcard c)
+
+ Defines all the properties required to be an Organization
+ To specify the organizational name associated with the vCard
+
+
+
+
+
+
+
+ organization name (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+ organizational unit name (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+ organisational
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ These properties are concerned with information associated with characteristics of the organization or organizational units of the object that the vCard represents
+
+
+
+
+
+
+
+ other
+
+
+
+
+
+
+
+
+ pager
+
+
+
+
+
+
+
+
+ parent
+
+
+
+
+
+
+
+
+ photo (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ Specifies an image or photograph information that annotates some aspect of the object the vCard represents
+
+
+
+
+
+
+
+ related (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify a relationship between another entity and the entity represented by this vCard
+
+
+
+
+
+
+
+ relation type
+
+
+
+
+
+
+
+
+ role (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the function or part played in a particular situation by the object the vCard represents
+
+
+
+
+
+
+
+ security
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+ Contains all the Security related Classes
+
+
+
+
+
+
+
+ sibling
+
+
+
+
+
+
+
+
+ sound (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify a digital sound content information that annotates some aspect of the vCard. This property is often used to specify the proper pronunciation of the name property value of the vCard
+
+
+
+
+
+
+
+ spouse
+
+
+
+
+
+
+
+
+ sweetheart
+
+
+
+
+
+
+
+
+ telephone (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+ phone
+
+
+
+
+
+
+
+
+ text
+
+ Also called sms telephone
+
+
+
+
+
+
+
+ text phone
+
+
+
+
+
+
+
+
+ time zone
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ Used to indicate time zone information that is specific to a location or address
+
+
+
+
+
+
+
+ title (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify the position or job of the object the vCard represents
+
+
+
+
+
+
+
+ type
+
+ This is called TYPE in vCard but renamed here to Context for less confusion (with types/class)
+
+
+
+
+
+
+
+ url (vcard c)
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ To specify a uniform resource locator associated with the object to which the vCard refers. Examples for individuals include personal web sites, blogs, and social networking site identifiers.
+
+
+
+
+
+
+
+ unknown
+
+
+
+
+
+
+
+
+ video (vcard c)
+
+
+
+
+
+
+
+
+ voice
+
+
+
+
+
+
+
+
+ work (vcard c)
+
+ This implies that the property is related to an individual's work place
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/contact.owl b/productMods/WEB-INF/filegraph/tbox/contact.owl
new file mode 100644
index 00000000..d4b9e122
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/contact.owl
@@ -0,0 +1,101 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ contact qualifier
+
+
+
+
+
+
+
+
+ foaf profile
+
+
+
+
+
+
+
+
+ contact
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ urllink
+
+ The full URL.
+ Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it.
+ http://info.slis.indiana.edu/~katy/
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/data-properties.owl b/productMods/WEB-INF/filegraph/tbox/data-properties.owl
new file mode 100644
index 00000000..608e71da
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/data-properties.owl
@@ -0,0 +1,2450 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2010-12-16
+ GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
+ World Bank
+ World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
+ http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
+ http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD
+ http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
+ ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD
+ http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ composite index measuring average achievement in three basic dimensions of human development-a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html
+ composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html
+ 2010-11-04
+ UNDP - HDRO
+ UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html
+ http://hdrstats.undp.org/en/indicators/49806.html
+ http://hdrstats.undp.org/en/indicators/49806.html
+ http://hdrstats.undp.org/es/indicadores/49806.html
+ http://hdrstats.undp.org/fr/indicateurs/49806.html
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2010-07-21
+ Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under "forest"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
+ FAOSTAT
+ FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ AGROVOC
+ AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub
+ http://aims.fao.org/ar/website/Search-AGROVOC/sub
+ http://aims.fao.org/website/Search-AGROVOC/sub
+ http://aims.fao.org/es/website/Search-AGROVOC/sub
+ http://aims.fao.org/fr/website/Search-AGROVOC/sub
+ http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-04-28
+ DBpedia
+ DBpedia http://dbpedia.org/About
+ http://dbpedia.org/About
+
+
+
+
+
+
+
+ FAOSTAT
+ FAOSTAT http://faostat.fao.org
+ http://faostat.fao.org
+ http://faostat.fao.org/default.aspx?lang=es
+ http://faostat.fao.org/default.aspx?lang=fr
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2008-12-10
+ Global Administrative Unit Layers
+ Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
+ http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
+
+
+
+
+
+
+
+ ISO 3166-1
+ ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
+ http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
+
+
+
+
+
+
+
+ 2010-04-01
+ United Nations Statistics Division
+ United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
+ http://unstats.un.org/unsd/methods/m49/m49alpha.htm
+ http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
+
+
+
+
+
+
+
+ 2010-04-01
+ United Nations Statistics Division
+ United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
+ http://unstats.un.org/unsd/methods/m49/m49alpha.htm
+ http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2011-07-21
+ Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
+ FAOSTAT
+ FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2011-07-21
+ FAOSTAT
+ FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2010-06-24
+ FAO terminology
+ FAO terminology http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/en/
+ http://www.fao.org/termportal/contr/ar/
+ http://www.fao.org/termportal/contr/en/
+ http://www.fao.org/termportal/contr/es/
+ http://www.fao.org/termportal/contr/fr/
+ http://www.fao.org/termportal/contr/zh/
+
+
+
+
+
+
+
+ 2009-09-21
+ FAOSTAT
+ FAOSTAT http://faostat.fao.org/site/550/default.aspx
+ The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor
+ http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before.
+
+
+
+
+
+
+
+ The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999.
+
+
+
+
+
+
+
+
+ is_template
+ The document can be used as a template for the creation of other documents.
+
+
+
+
+
+
+
+
+
+ user_defined_tag
+ A free text field for recording topics which relate to the resource.
+
+
+
+
+
+
+
+
+ patient_id
+
+
+
+
+
+
+
+
+
+
+ health care provider id
+
+
+
+
+
+
+
+
+
+
+ measurement_label
+
+
+
+
+
+
+
+ has_inventory_number
+ An example inventory number can be in the form: 12345
+ Inventory identifier for the resource.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ has inventory number
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_restriction
+ A restriction on service availability, such as university or consortium affiliation, geographical location, professional certification, or other factors.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Resource is only available to researchers in the department.
+ has restriction
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_geographic_restriction
+ Any service limitation tied to geographically-defined areas such as metro areas, counties, states, or regions.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Resource is only available to researchers in Boston area.
+ has geographic restriction
+
+
+
+
+
+
+
+
+
+
+
+ model_number
+ ABI 9000
+ Instrument model number, which may be a name, number, or both.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ model number
+
+
+
+
+
+
+
+
+
+
+ lab_data_format
+ Current method or software used to inventory a lab's resources. Examples include Excel, index cards, FileMaker, 3-ring binder, etc.
+ Excel spreadsheet
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ lab data format
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ version
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Software edition, typically a numeral followed by a decimal and another numeral, such as 2.1.
+ v 1.0
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_accession_number
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ The accession number for a gene.
+ Unique identifier of a biological polymer sequence (DNA, RNA, protein) when it is submitted to a sequence database.
+ accession number
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_study_population
+ African american study population.
+ Characteristics of the human population being studied. May include number, demographic or geographic information, inclusion or exclusion criteria, or other descriptive information.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ study population
+
+
+
+
+
+
+
+
+
+
+ has_eligibility_requirment
+ A grade point average above 3.5 is an eligibility requirement.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Requirements for research opportunity eligibility. Requirements include: coursework, minimum gradepoint average, state residency, under-represented group status, field of study, or matriculation status.
+ has eligibility requirement
+
+
+
+
+
+
+
+
+
+
+ abstract
+ http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/dc/terms/
+ A summary of the resource.
+ stable
+
+
+
+
+
+
+
+ asin
+ 020530902X
+ Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number.
+ http://purl.org/ontology/bibo/
+ Amazon Standard Identification Number
+ stable
+
+
+
+
+
+
+
+ chapter (bibo dp)
+ Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future
+ http://purl.org/ontology/bibo/
+ An chapter number
+ unstable
+
+
+
+
+
+
+
+ coden
+ CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues.
+Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN
+ http://purl.org/ontology/bibo/
+ An identifier of serials, still in use by libraries, but replaced by ISSN for any new work
+ stable
+
+
+
+
+
+
+
+ digital object identifier (doi)
+ http://purl.org/ontology/bibo/
+ stable
+ Digital Object Identifier
+
+
+
+
+
+
+
+ ean international-uniform code council (ean-ucc) 13
+ Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council.
+The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.
+ http://purl.org/ontology/bibo/
+ European Article Number/Uniform Commercier Code 13
+ stable
+
+
+
+
+
+
+
+ edition
+ http://purl.org/ontology/bibo/
+ The name defining a special edition of a document. Normally its a literal value composed of a version number and words.
+ stable
+
+
+
+
+
+
+
+ electronic international standard serial number (eissn)
+ eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN
+ http://purl.org/ontology/bibo/
+ stable
+ The electronic ISSN number of a periodical.
+
+
+
+
+
+
+
+ gtin14
+ http://en.wikipedia.org/wiki/Global_Trade_Item_Number.
+ http://purl.org/ontology/bibo/
+ stable
+ Global Trade Item Number 14
+
+
+
+
+
+
+
+ identifier (bibo)
+
+
+
+
+
+
+
+ international standard book number (isbn) 10
+ http://en.wikipedia.org/wiki/Isbn.
+
+
+
+
+
+
+
+ international standard book number (isbn) 13
+ source: http://en.wikipedia.org/wiki/Isbn.
+
+
+
+
+
+
+
+ international standard serial number (issn)
+ http://purl.org/ontology/bibo/
+ source: http://en.wikipedia.org/wiki/Issn
+ stable
+ International Standard Serial Number
+
+
+
+
+
+
+
+ issue (bibo dp)
+ Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number "4"
+
+
+
+
+
+
+
+ library of congress control number (lccn)
+ Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number.
+ http://purl.org/ontology/bibo/
+ stable
+ Library of Congress Control Number
+
+
+
+
+
+
+
+ locator
+ definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/ontology/bibo/
+ stable
+ A description (often numeric) that locates an item within a containing document or collection.
+
+
+
+
+
+
+
+ number of pages
+
+
+
+
+
+
+
+ number
+ Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+
+
+
+
+
+
+
+ online computer library center (oclc) number
+ http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/.
+
+
+bibo has the domain of this property set to the union of Collection and Document.
+ http://purl.org/ontology/bibo/
+ stable
+ OCLC Identifier
+
+
+
+
+
+
+
+ end page
+ http://purl.org/ontology/bibo/
+ stable
+ Ending page number within a continuous page range.
+
+
+
+
+
+
+
+ start page
+ http://purl.org/ontology/bibo/
+ stable
+ Starting page number within a continuous page range.
+
+
+
+
+
+
+
+ pubmed identifier
+ The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind.
+ http://purl.org/ontology/bibo/
+ stable
+ PubMed Identifier
+
+
+
+
+
+
+
+ name prefix
+ Mr; Ms; Mrs
+ http://dictionary.reference.com/browse/prefix
+ http://purl.org/ontology/bibo/
+ stable
+ The prefix of a name
+
+
+
+
+
+
+
+ section
+ http://purl.org/ontology/bibo/
+ An section number
+ Di Rado, Alicia. 1995. Trekking through college: Classes explore
+modern society using the world of Star trek. Los Angeles Times, March
+15, sec. A, p. 3.
+ unstable
+
+
+
+
+
+
+
+ short description
+ http://purl.org/ontology/bibo/
+ A short description of the resource.
+ The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry.
+ unstable
+
+
+
+
+
+
+
+ sici
+ A sub property of identifier (http://en.wikipedia.org/wiki/SICI).
+ http://purl.org/ontology/bibo/
+ Serial Item and Contribution Identifier
+ stable
+
+
+
+
+
+
+
+ name suffix
+ Jr.; III;; M.D.
+ http://purl.org/ontology/bibo/
+ stable
+ The suffix of a name
+
+
+
+
+
+
+
+ upc
+ http://purl.org/ontology/bibo/
+ source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code.
+ stable
+ Universal Product Code
+
+
+
+
+
+
+
+ uri
+ Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+
+
+
+
+
+
+
+ volume (bibo)
+
+
+
+
+
+
+
+ has global count date
+ The date on which the global citation count of the cited entity was recorded from a named bibliographic information source.
+
+
+
+
+
+
+
+ has global count value
+ An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.
+
+
+
+
+
+
+
+
+ abbreviation
+ A short form for an longer title or name.
+ B.A.
+
+
+
+
+
+
+
+ published us classification class/subclass (ccl) code
+
+
+
+
+
+
+
+
+
+ credits
+
+
+
+
+
+
+
+ date/time
+
+
+
+
+
+
+
+
+ era commons id
+
+
+
+
+
+
+
+
+ keywords
+ conservation
+
+use one freetextKeyword assertion for each keyword or phrase.
+ one keyword or phrase per freetextKeyword assertion
+
+
+
+
+
+
+
+
+ direct costs
+
+
+
+
+
+
+
+ has_monetary_amount
+
+
+
+
+
+
+
+ has_value
+
+
+
+
+
+
+
+ international classification (icl) code
+ The International classification(s) to which the published application has been assigned.
+
+
+
+
+
+
+
+
+
+ identifier (vivo)
+
+
+
+
+
+
+
+ license number
+
+
+
+
+
+
+
+
+ link uri
+
+
+
+
+
+
+
+
+ local award id
+ core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI
+
+
+
+
+
+
+
+
+ major field of degree
+ Information Science; Computer Science; Anthropology
+
+
+
+
+
+
+
+ middle name or initial
+
+
+
+
+
+
+
+ nih manuscript submission system id
+
+
+
+
+
+
+
+
+
+ orcid id
+ We can't yet assume that we will only have a single ORCID id for a person.
+source: http://en.wikipedia.org/wiki/ORCID .
+
+
+We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible.
+
+
+
+
+
+
+
+
+
+ outreach overview
+ My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production.
+ Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities
+
+
+
+
+
+
+
+
+ overview
+
+
+
+
+
+
+
+
+ patent number
+ source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp .
+
+
+
+
+
+
+
+
+
+
+ place of publication
+
+
+
+
+
+
+
+ pubmed central id
+ A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission.
+
+
+
+
+
+
+
+
+
+ rank
+ this number indicates a position in a list
+
+
+
+
+
+
+
+
+
+ report identifier
+
+
+
+
+
+
+
+
+
+
+ research overview
+ Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities
+
+
+
+
+
+
+
+ isi researcher id
+ RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile.
+Definition source: http://isiwebofknowledge.com/researcherid/
+
+
+
+
+
+
+
+
+ scopus id
+ Home page for Scopus: http://www.scopus.com/home.url
+
+
+
+
+
+
+
+
+
+ seating capacity
+ 55
+ definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity).
+
+
+
+
+
+
+
+
+
+ sponsor award id
+ Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public.
+
+
+See also core:localAwardId.
+
+
+
+
+
+
+
+
+
+ supplemental information
+
+
+
+
+
+
+
+
+ teaching overview
+ Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the "teaches" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses
+
+
+
+
+
+
+
+
+ total award amount
+
+
+
+
+
+
+
+ institutional review board (irb) number
+ Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected.
+
+
+
+
+
+
+
+ national clinical trials (nct) number
+ ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials
+ NCT00000419
+
+
+
+
+
+
+
+ study population count
+ number of human participants in the study (trial).
+
+
+
+
+
+
+
+ additional name
+
+
+
+
+
+
+
+
+
+ anniversary
+ The date of marriage, or equivalent, of the object the vCard represents
+
+
+
+
+
+
+
+
+
+ birthdate
+ To specify the birth date of the object the vCard represents
+
+
+
+
+
+
+
+
+
+ calendar busy (vcard dp)
+
+
+
+
+
+
+
+
+
+ calendar link (vcard dp)
+
+
+
+
+
+
+
+
+
+ calendar request (vcard dp)
+
+
+
+
+
+
+
+
+
+ category (vcard dp)
+
+
+
+
+
+
+
+
+
+ country (vcard dp)
+
+
+
+
+
+
+
+
+
+ email (vcard dp)
+
+
+
+
+
+
+
+
+
+ has last name
+ Called Family Name in vCard
+
+
+
+
+
+
+
+
+
+ has format name
+
+
+
+
+
+
+
+
+
+ gender (vcard dp)
+ To specify the components of the sex and gender identity of the object the vCard represents.
+To enable other Gender/Sex codes to be used, this dataproperty has range URI. The vCard gender code classes are defined under Code/Gender
+
+
+
+
+
+
+
+
+
+ geo (vcard dp)
+ Must use the geo URI scheme RFC5870
+
+
+
+
+
+
+
+
+
+ first name
+ called Given Name invCard
+
+
+
+
+
+
+
+
+
+ has prefix name
+ Called Honorific Prefix in vCard
+
+
+
+
+
+
+
+
+
+ honorific suffix name
+
+
+
+
+
+
+
+
+
+ instant message
+
+
+
+
+
+
+
+
+
+ key (vcard dp)
+
+
+
+
+
+
+
+
+
+ has language (vcard dp)
+ Use 2 char language code from RFC5646
+
+
+
+
+
+
+
+
+ locality
+
+
+
+
+
+
+
+
+
+ logo (vcard dp)
+
+
+
+
+
+
+
+
+
+ nick name
+
+
+
+
+
+
+
+
+
+ note (vcard dp)
+
+
+
+
+
+
+
+
+
+ organization name (vcard dp)
+
+
+
+
+
+
+
+
+
+ organizational unit name (vcard dp)
+
+
+
+
+
+
+
+
+
+ photo (vcard dp)
+
+
+
+
+
+
+
+
+
+ postal code
+
+
+
+
+
+
+
+
+
+ product id
+
+
+
+
+
+
+
+
+ region
+
+
+
+
+
+
+
+
+
+ related (vcard dp)
+
+
+
+
+
+
+
+
+
+ revision
+
+
+
+
+
+
+
+
+ role (vcard)
+
+
+
+
+
+
+
+
+
+ sort as
+
+
+
+
+
+
+
+
+ sound (vcard dp)
+
+
+
+
+
+
+
+
+
+ source
+
+
+
+
+
+
+
+
+ street address
+
+
+
+
+
+
+
+
+
+ telephone (vcard dp)
+
+
+
+
+
+
+
+
+ timezone
+
+
+
+
+
+
+
+
+
+ title (vcard dp)
+
+
+
+
+
+
+
+
+
+ uid
+ To specify a value that represents a globally unique identifier corresponding to the entity associated with the vCard
+
+
+
+
+
+
+
+
+ url (vcard dp)
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/date-time.owl b/productMods/WEB-INF/filegraph/tbox/date-time.owl
new file mode 100644
index 00000000..b08b108f
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/date-time.owl
@@ -0,0 +1,130 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ academic term
+
+ An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester.
+
+
+
+
+
+
+
+ academic year
+
+ An explicit individual period considered by an academic institution to be its primary academic cycle.
+
+
+
+
+
+
+
+ date/time interval
+ a specific period or duration, defined by (optional) start and end date/times.
+
+
+
+
+
+
+
+ date/time value instance
+ A date and/or time
+
+
+
+
+
+
+
+
+
+
+
+
+ yearmonthdayvalue
+
+
+
+
+
+
+
+ yearmonthdaytimevalue
+
+
+
+
+
+
+
+ yearmonthvalue
+
+
+
+
+
+
+
+ yearvalue
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/education.owl b/productMods/WEB-INF/filegraph/tbox/education.owl
new file mode 100644
index 00000000..d9f46c0d
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/education.owl
@@ -0,0 +1,453 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ funding role
+
+ A role inhering in a person or organization that is realized when the bearer participates in providing funding to a person or an organization for academic or business purposes.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+ The NIH is a funding agency.
+
+
+
+
+
+
+
+
+ educator role
+
+ A role inhering in a person or organization that is realized when the bearer participates in providing education to a student or group of students.
+ A teacher.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ research opportunity
+ A planned process carried out by a person or organization with the objective of performing research.
+ An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+ Training grant to perform post-doctoral research.
+ student research opportunity
+
+
+
+
+
+
+
+
+ us resident role
+
+ A role that inheres in a person who maintains residency in the United states.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ us citizen role
+
+ A US resident role that inheres in an individual that is a legally recognized as a member of a state, with associated rights and obligations.
+ PERSON: Nicole Vasilevsky
+ http://en.wiktionary.org/wiki/citizen
+
+
+
+
+
+
+
+
+ non-us citizen
+
+ A US resident role that inheres in an individual who is not a legally recognized subject or national of the United States.
+ PERSON: Nicole Vasilevsky
+ https://www.google.com/search?q=residency+status&ie=utf-8&oe=utf-8&aq=t&rls=org.mozilla:en-US:official&client=firefox-a#hl=en&client=firefox-a&hs=Bcx&rls=org.mozilla:en-US:official&q=citizen&tbs=dfn:1&tbo=u&sa=X&ei=micXT_DwMIjUiAK15tDUDw&ved=0CCgQkQ4&bav=on.2,or.r_gc.r_pw.,cf.osb&fp=7b67128a22f602af&biw=1609&bih=794
+
+
+
+
+
+
+
+
+ permanent resident role
+
+ An role that inheres in an individual who is not a citizen but who legally resides in another nation on a permanent or extended basis.
+ PERSON: Nicole Vasilevsky
+ http://connection.ebscohost.com/us/immigration-restrictions/overview-legal-and-illegal-immigration
+
+
+
+
+
+
+
+
+ non-permanent resident role
+
+ A non-US citizen role that inheres in an individual who is residing in a country, but is neither a citizen nor a permanent resident.
+ PERSON: Nicole Vasilevsky
+ http://www.irs.gov/taxtopics/tc851.html
+
+
+
+
+
+
+
+
+ student role
+
+ A college student.
+ A role inhering in a person that is realized when the bearer participates a course of study, as in a school, college, university, etc.
+ PERSON: Nicole Vasilevsky
+ http://www.thefreedictionary.com/student
+
+
+
+
+
+
+
+
+ undergraduate student role
+
+ A college student.
+ A student role inhering in a person that is realized when the bearer participates in a course of study at a college, university, etc. in pursuit of an associate or bachelor degree.
+ PERSON: Nicole Vasilevsky
+ http://www.thefreedictionary.com/student
+
+
+
+
+
+
+
+
+ graduate student role
+
+ A PhD student at a university.
+ A student role inhering in a person that is realized when the bearer participates a course of study at a university or institution in pursuit of an graduate or professional degree.
+ PERSON: Nicole Vasilevsky
+ http://www.thefreedictionary.com/student
+
+
+
+
+
+
+
+
+ high school student role
+
+ A freshman in high school.
+ A student role inhering in a person that is realized when the bearer participates in a course of study at a secondary learning institution.
+ PERSON: Nicole Vasilevsky
+ http://www.thefreedictionary.com/student
+
+
+
+
+
+
+
+
+ employee role
+
+ A role inhering in a person that is realized when the bearer participates in an occupation by which a person earns a living or spends their time.
+ An employee at a university.
+ PERSON: Nicole Vasilevsky
+ http://dictionary.reference.com/browse/employment
+
+
+
+
+
+
+
+
+ faculty role
+
+ A professor at a university.
+ An employee role inhering in a person that is realized when the bearer participates in the teaching and/or administrative force of a university, college, or school.
+ PERSON: Nicole Vasilevsky
+ http://dictionary.reference.com/browse/faculty
+
+
+
+
+
+
+
+
+ staff role
+
+ A research technician in a lab.
+ An employee role inhering in a person that is realized when the bearer is employed by an employer.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ post-baccalaureate trainee
+
+ A student role inhering in a person that is realized when the bearer participates in a post-baccalaureate training program in pursuit of an additional bachelor degree or new or additional training in a particular field.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ post-graduate student trainee role
+
+ A post-doctoral fellow.
+ A student role inhering in a person that is realized when the bearer participates in a post-graduate training program in pursuit of new or additional training in a particular field, such as a post-doctoral fellowship.
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ regulatory role
+
+ GROUP: Role branch
+ OBI, CDISC
+ Regulatory agency, Ethics committee, Approval letter; example: Browse these EPA Regulatory Role subtopics http://www.epa.gov/ebtpages/enviregulatoryrole.html Feb 29, 2008
+ a role which inheres in material entities and is realized in the processes of making, enforcing or being defined by legislation or orders issued by a governmental body.
+ regulatory role
+
+
+
+
+
+
+
+
+
+ advising relationship
+
+ A dual relationship of one person being advised or mentored by another person, typically including start and end dates
+
+
+
+
+
+
+
+ certification
+
+ An issued certificate
+ see also core:Certificate
+
+
+
+
+
+
+
+ educational process
+
+
+
+
+
+
+
+ faculty mentoring relationship
+
+ An advisory relationship in which one faculty member mentors another faculty member.
+
+
+
+
+
+
+
+ graduate advising relationship
+
+ An advisory relationship in which a professor advises a graduate student.
+
+
+
+
+
+
+
+ internship
+
+ Typically a student or a recent graduate undergoing supervised practical training.
+
+
+
+
+
+
+
+ issued credential
+
+
+
+
+
+
+
+
+ licensure
+
+ A granted license, which gives a 'permission to practice.'
+ A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License.
+
+
+
+
+
+
+
+ medical residency
+
+ Residency is a stage of graduate medical training.
+
+
+
+
+
+
+
+ postdoc or fellow advising relationship
+
+ An advisory relationship in which the advisee is a Postdoc or Fellow.
+
+
+
+
+
+
+
+ postdoctoral training
+
+ Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject.
+
+
+
+
+
+
+
+
+
+
+
+
+
+ undergraduate advising relationship
+
+ An advisory relationship in which a professor advises an undergraduate student.
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/event.owl b/productMods/WEB-INF/filegraph/tbox/event.owl
new file mode 100644
index 00000000..b2e2cf4a
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/event.owl
@@ -0,0 +1,198 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ event
+ Only use if no specific subclasses of event:Event are appropriate.
+ Something that happens at a given place and time.
+ This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series.
+
+The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent."
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ attendee role
+ A role of attending an Event or EventSeries
+
+
+
+
+
+
+
+ competition
+
+ An occasion on which a winner is selected from among two or more contestants.
+ Intel Talent Search; poetry contest
+ Not the same as an award or distinction.
+
+
+
+
+
+
+
+ conference series
+
+ An organized series of a meeting for consultation or discussion.
+ For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar.
+
+
+
+
+
+
+
+ event series
+ A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes.
+ Only use if no specific subclasses of core:EventSeries desribe the activity.
+ Two or more events that occur at different times and are connected to each other.
+
+
+
+
+
+
+
+ exhibit
+
+ The showing of an object or a collection of objects, in an organized manner.
+
+
+
+
+
+
+
+ meeting
+
+ A gathering of people for a defined purpose, not necessarily public or announced
+
+
+
+
+
+
+
+ organizer role
+ A role of organizing
+
+
+
+
+
+
+
+ presentation
+
+ Encompasses talk, speech, lecture, slide lecture, conference presentation
+
+
+
+
+
+
+
+ presenter role
+ A role of presenting information
+ Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?
+
+
+
+
+
+
+
+ seminar series
+
+ An organized series of a meeting for an exchange of ideas, typically put on by a department or center.
+ Applied Microeconomics Seminars; Future of Rural New York Seminar Series
+ For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar.
+
+
+
+
+
+
+
+ workshop series
+
+ An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops.
+ Use workshop for individual events.
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/geo-political.owl b/productMods/WEB-INF/filegraph/tbox/geo-political.owl
new file mode 100644
index 00000000..02921744
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/geo-political.owl
@@ -0,0 +1,1176 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm
+
+
+
+
+
+
+
+ group (geo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+ UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
+
+
+
+
+
+
+
+ organization (geo)
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ self governing
+
+
+
+ United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+ 1
+
+
+
+
+
+
+
+
+
+ continent
+
+ A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf.
+ Short Definition take from http://en.wiktionary.org/wiki/continent.
+ The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America
+
+
+
+
+
+
+
+ country (vivo)
+
+ Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America
+ An area of land distinguished by its political autonomy. Politically independent territories.
+ Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing.
+
+
+
+
+
+
+
+ county
+
+ Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo
+ Short Definition modified from the one found here: http://www.thefreedictionary.com/county.
+ The largest administrative division of most states or provinces.
+
+
+
+
+
+
+
+
+
+
+
+
+
+ geopolitical entity
+
+ A geographical area which is associated with some sort of political structure.
+ Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity.
+ Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible.
+
+
+
+
+
+
+
+ state or province
+
+ Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario
+ One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US.
+ Source of the Short Definition: http://www.thefreedictionary.com/state.
+
+
+
+
+
+
+
+ subnational region
+
+ Boroughs; townships; districts; the Midwest
+ For example, the Midwest, northeast U.S.
+ Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity.
+ Smaller administrative division into which a country may be divided.
+
+
+
+
+
+
+
+ transnational region
+
+ Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion.
+ None as yet.
+ Not sure how to access the "Editor's Comments". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities.
+ sub-Saharan Africa, North America
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/geopolitical.tbox.ver1.1-11-18-11.owl b/productMods/WEB-INF/filegraph/tbox/geopolitical.tbox.ver1.1-11-18-11.owl
deleted file mode 100644
index d9ca2dbd..00000000
--- a/productMods/WEB-INF/filegraph/tbox/geopolitical.tbox.ver1.1-11-18-11.owl
+++ /dev/null
@@ -1,1870 +0,0 @@
-
-
- prior version : " http://aims.fao.org/aos/geopolitical_v10.owl"
- The use of the information presented on the FAO Country Profiles portal is governed by FAO's copyright reservation. Any queries regarding the content, sources or use, please contact FAO-country-profiles@fao.org or visit http://www.fao.org/countryprofiles.
- FAO DISCLAIMER: Information on the FAO Country Profiles portal is provided as and when available. The designations employed and the presentation of information do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal status of any country, territory, city or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. FAO makes every effort to ensure, but does not guarantee, the accuracy or completeness of and declines responsibility for any loss, damage, liability or expense suffered which is claimed to result from its use.
- Version 1.1 of the ontology includes a structured description of sources (source creator, source identifier by language, and last updated date on source) .
-
- FAO's geopolitical ontology version 1.1 was populated with FAO, UN and internationally recognized data sources.
- 2011-08-11
- version 1.1
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- 1
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- UN Cartographic Section, Department of Field Support
- http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
- 2010-05-01
- UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
-
-
-
-
-
- United Nations Map Library
- http://www.un.org/depts/dhl/maplib/countinfo.htm
- 2010-09-08
- United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm
-
-
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-
-
- United Nations statistics department
- http://unstats.un.org/unsd/methods/m49/m49regnf.htm
- http://unstats.un.org/unsd/methods/m49/m49regin.htm
- 2010-04-01
- United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm
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- 1
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- 1
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- 1
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- 1
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- 1
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-
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-
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-
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- 1
-
-
-
-
-
-
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- 1
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-
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-
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-
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- 1
-
-
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-
-
-
-
- 1
-
-
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-
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-
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- 1
-
-
-
-
-
-
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- 1
-
-
-
-
-
-
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- 1
-
-
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-
-
-
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- 1
-
-
-
-
-
-
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- 1
-
-
-
-
-
-
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- 1
-
-
-
-
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-
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- 1
-
-
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-
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- 1
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- 1
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- 1
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- 1
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-
-
- United Nations Statistics Division
-
- United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
- http://unstats.un.org/unsd/methods/m49/m49chang.htm
- 2010-04-15
- http://unstats.un.org/unsd/methods/m49/m49chgef.htm
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- United Nations cartographic maps
- http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
- 2010-05-01
- United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
-
-
-
-
-
-
-
-
- http://unstats.un.org/unsd/methods/m49/m49chgef.htm
- United Nations Statistics Division
- 2010-04-15
-
- United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
- http://unstats.un.org/unsd/methods/m49/m49chang.htm
-
-
-
-
-
-
-
- United Nations cartographic maps
- http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
- 2010-05-01
- United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
-
-
-
-
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/ar/
-
-
-
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- 2010-06-24
- FAO terminology
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/zh/
-
-
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/en/
- FAO terminology
- http://www.fao.org/termportal/contr/zh/
- 2010-06-24
- FAO terminology http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/en/
-
-
-
-
-
-
-
-
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/en/
- FAO terminology
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
-
-
-
- http://www.fao.org/termportal/contr/zh/
- 2010-06-24
- http://www.fao.org/termportal/contr/es/
-
-
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/es/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/en/
-
-
-
- FAO terminology
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/fr/
- 2010-06-24
-
-
-
-
-
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- FAOSTAT
- FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
- 2010-07-21
- Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under "forest"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
-
-
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- FAO terminology
- 2010-06-24
- http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/contr/es/
-
-
- 2010-06-24
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology http://www.fao.org/termportal/en/
-
-
-
- FAO terminology
-
-
-
-
-
-
-
-
- 2010-06-24
- http://www.fao.org/termportal/contr/ar/
- FAO terminology
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
-
-
-
-
-
- FAO terminology
- 2010-06-24
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
-
-
-
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/fr/
-
-
- http://www.fao.org/termportal/en/
- FAO terminology
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/es/
- 2010-06-24
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
- FAO terminology http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/contr/zh/
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
-
-
-
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/en/
- FAO terminology
- 2010-06-24
- http://www.fao.org/termportal/contr/ar/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- FAO terminology
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/ar/
-
-
-
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/en/
- 2010-06-24
-
-
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
-
-
-
- http://www.fao.org/termportal/contr/ar/
-
- FAO terminology
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- 2010-06-24
- http://www.fao.org/termportal/en/
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
-
-
-
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology
- 2010-06-24
-
-
- http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor
- 2009-09-21
- The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx
- http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor
- FAOSTAT
-
-
-
- http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor
- FAOSTAT http://faostat.fao.org/site/550/default.aspx
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/es/
- FAO terminology
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/en/
- FAO terminology http://www.fao.org/termportal/en/
-
-
-
- 2010-06-24
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
-
-
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/fr/
- FAO terminology http://www.fao.org/termportal/en/
- 2010-06-24
-
-
-
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/en/
- FAO terminology
- http://www.fao.org/termportal/en/
-
-
- 2010-06-24
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/zh/
-
-
-
- FAO terminology
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
-
-
-
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/en/
- FAO terminology
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/es/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
- 2010-06-24
- http://www.fao.org/termportal/contr/ar/
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- FAO terminology
-
-
-
- 2010-06-24
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/zh/
-
-
-
-
-
-
-
-
-
-
-
-
- http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD
- World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
- http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD
- GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
- 2010-12-16
- World Bank
-
- ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD
- http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
- http://data.worldbank.org/indicator/NY.GDP.MKTP.CD
-
-
-
-
-
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology
- http://www.fao.org/termportal/en/
- FAO terminology http://www.fao.org/termportal/en/
- 2010-06-24
-
-
- FAOSTAT
- 2011-07-21
- FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
- Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx
-
-
-
-
-
-
- http://www.fao.org/termportal/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology
- 2010-06-24
-
-
- FAO terminology http://www.fao.org/termportal/en/
- 2010-06-24
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/fr/
-
- FAO terminology
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
-
-
-
-
-
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- 2010-06-24
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- 2010-06-24
- FAO terminology
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/contr/es/
-
-
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
-
-
-
- FAO terminology
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- 2010-06-24
-
-
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology
- 2010-06-24
-
-
-
- http://www.fao.org/termportal/contr/es/
-
-
-
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/en/
- FAO terminology
- 2010-06-24
- http://www.fao.org/termportal/contr/fr/
-
-
-
-
-
- United Nations Statistics Division
- http://unstats.un.org/unsd/methods/m49/m49alpha.htm
- http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
- 2010-04-01
- United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
-
-
- http://www.fao.org/termportal/contr/fr/
- FAO terminology
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/contr/en/
- 2010-06-24
- http://www.fao.org/termportal/contr/zh/
-
-
- The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before.
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- DBpedia
- http://dbpedia.org/About
- 2010-04-28
- DBpedia http://dbpedia.org/About
-
-
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor
- 2011-07-21
- Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
-
- FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor
- FAOSTAT
-
-
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology
- 2010-06-24
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/en/
-
- http://www.fao.org/termportal/contr/fr/
-
-
- http://www.fao.org/termportal/contr/zh/
- FAO terminology
- http://www.fao.org/termportal/en/
-
-
-
- http://www.fao.org/termportal/contr/ar/
- 2010-06-24
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/es/
-
-
-
-
-
- FAOSTAT
- http://faostat.fao.org
- http://faostat.fao.org/default.aspx?lang=es
- http://faostat.fao.org/default.aspx?lang=fr
- FAOSTAT http://faostat.fao.org
-
-
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/fr/
- FAO terminology
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
-
- 2010-06-24
-
-
-
-
-
-
-
-
-
-
-
-
- AGROVOC
- http://aims.fao.org/fr/website/Search-AGROVOC/sub
- AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub
- http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub
- http://aims.fao.org/ar/website/Search-AGROVOC/sub
- http://aims.fao.org/es/website/Search-AGROVOC/sub
- http://aims.fao.org/website/Search-AGROVOC/sub
-
-
-
-
-
-
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- 2010-06-24
- http://www.fao.org/termportal/contr/fr/
- FAO terminology
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/zh/
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/es/
-
-
-
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/fr/
- FAO terminology
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/en/
- 2010-06-24
-
-
- 2010-06-24
- http://www.fao.org/termportal/contr/fr/
- http://www.fao.org/termportal/contr/en/
-
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology
- http://www.fao.org/termportal/contr/ar/
-
-
-
-
-
-
-
-
-
-
-
- Global Administrative Unit Layers
- http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
- 2008-12-10
- Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691
-
-
- 2010-06-24
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- FAO terminology
-
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/es/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/fr/
-
-
-
-
-
-
-
- ISO 3166-1
- http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
- ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm
-
-
- http://www.fao.org/termportal/en/
- 2010-06-24
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/zh/
- FAO terminology http://www.fao.org/termportal/en/
- FAO terminology
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/contr/fr/
-
-
-
- FAO terminology
- http://www.fao.org/termportal/contr/ar/
-
- http://www.fao.org/termportal/contr/en/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/es/
- http://www.fao.org/termportal/contr/fr/
- 2010-06-24
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
-
-
- http://hdrstats.undp.org/en/indicators/49806.html
- http://hdrstats.undp.org/en/indicators/49806.html
- http://hdrstats.undp.org/fr/indicateurs/49806.html
- 2010-11-04
- UNDP - HDRO
-
- UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html
- composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html
- http://hdrstats.undp.org/es/indicadores/49806.html
-
-
-
-
-
-
-
-
-
-
-
-
-
- http://www.fao.org/termportal/contr/es/
- FAO terminology http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/ar/
- http://www.fao.org/termportal/contr/en/
- http://www.fao.org/termportal/en/
- http://www.fao.org/termportal/contr/zh/
- http://www.fao.org/termportal/contr/fr/
- FAO terminology
- 2010-06-24
-
-
-
-
- United Nations Statistics Division
- http://unstats.un.org/unsd/methods/m49/m49alpha.htm
- http://unstats.un.org/unsd/methods/m49/m49alphaf.htm
- 2010-04-01
- United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm
-
-
-
-
-
-
- The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999.
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/grant.owl b/productMods/WEB-INF/filegraph/tbox/grant.owl
new file mode 100644
index 00000000..f84e1b08
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/grant.owl
@@ -0,0 +1,113 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ co-principal investigator role
+
+ Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel.
+
+
+
+
+
+
+
+ contract
+ An agreement involving specific deliverables and payment
+
+
+
+
+
+
+
+ grant
+
+ An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)
+ Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity
+ Short definition is from the Glossary of NIH Terms.
+
+
+
+
+
+
+
+ investigator role
+
+ A role in an Agreement (for example, a grant) as a named investigator or key personnel.
+
+
+
+
+
+
+
+ principal investigator role
+
+ Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director.
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/location.owl b/productMods/WEB-INF/filegraph/tbox/location.owl
new file mode 100644
index 00000000..0650cecf
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/location.owl
@@ -0,0 +1,148 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ building
+
+ Building that provides a particular service or is used for a particular activity.
+ Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address.
+ Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium
+
+
+
+
+
+
+
+ campus
+
+ Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar
+ Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus).
+ The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site.
+
+
+
+
+
+
+
+ facility
+ Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility.
+ Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service.
+ Use subclasses of core:Facility subclasses instead of this class if possible
+
+
+
+
+
+
+
+ geographic location
+
+ A location having coordinates in geographic space.
+ Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
+ Use subclasses of core:Geographic Location subclasses instead of this class if possible.
+
+
+
+
+
+
+
+ geographic region
+
+ A location having coordinates in geographic space.
+ Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
+ Use subclasses of core:Geographic Region subclasses instead of this class if possible.
+
+
+
+
+
+
+
+
+
+
+
+
+
+ location
+ It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class.
+ Top level of all location classes.
+ Use subclasses of core:Location when classsifying items.
+
+
+
+
+
+
+
+ populated place
+
+ Either city or town - a thickly populated area having fixed boundaries and certain local powers of government.
+
+
+
+
+
+
+
+ room
+
+ 100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)
+ Enter room number of name.
+ Room that provides a particular service or is used for a particular activity.
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/object-properties.owl b/productMods/WEB-INF/filegraph/tbox/object-properties.owl
index 0119a05b..a4601654 100644
--- a/productMods/WEB-INF/filegraph/tbox/object-properties.owl
+++ b/productMods/WEB-INF/filegraph/tbox/object-properties.owl
@@ -122,16 +122,6 @@
-
-
-
- relevant_for
-
-
-
-
-
-
@@ -211,6 +201,586 @@
+
+
+
+ provides_access_to
+ An access service that provides access to a flow cytometer.
+ Instruments, reagents, organisms, or software for which the service provides access.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ change the domain tye to access service
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ uses
+ Here there are things to be fixed (for instance a service can use a technique...)
+ Microsoft powerpoint is commonly used in research laboratories to prepare presentations.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Software or protocol used by the laboratory.
+ uses
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_expertise
+ Brian Druker has expertise in cancer research.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Technique in which the person is proficient.
+ has expertise
+
+
+
+
+
+
+
+
+
+
+ has_manufacturer
+ Organization or person that created the resource.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Santa Cruz Biotechnology is the manufacturer of many antibodies.
+ has manufacturer
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ provides_service
+ A core lab providing cell sorting to individual labs.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Service offered by the organization.
+ provides services
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ specifies_the_use_of
+ A protocol can specify the use of a flow cytometer.
+ Instruments, techniques, reagents, organisms, or software that are referenced in a protocol.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ specifies the use of
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ used_by
+ A laboratory uses Microsoft Word.
+ Laboratory that uses the protocol or software.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ used by
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_input_type
+ Imaging processing software that requires .jpg format files for analysis.
+ PERSON: Carlo Torniai
+ PERSON: Melissa Haendel
+ Software data input format.
+ has input format
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_output_type
+ Microsoft Excel arranges and saves data in .xlsx format.
+ PERSON: Carlo Torniai
+ PERSON: Melissa Haendel
+ Software data output type.
+ has output format
+
+
+
+
+
+
+
+
+
+
+ achieves_objective
+ ImageJ software measures characteristics of digital images.
+ PERSON: Carlo Torniai
+ PERSON: Melissa Haendel
+ Transformation objective of the software.
+ achieves objective
+
+
+
+
+
+
+
+
+
+
+ service_provided_by
+ A core laboratory provides a service.
+ Organization or laboratory performing the service.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ service provided by
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ performs
+ A cancer researcher performs apoptosis assays.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Technique carried out by the person or laboratory.
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ is_performed_by
+ Confocal microscopy is performed by a confocal core laboratory.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Person or laboratory that performs the service or technique.
+ is performed by
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_documentation
+ An antibody has documentation describing attributes of the antibody.
+ Document that contains relevant resource information.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ has documentation
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ realizes_protocol
+ A sequencing protocol used for next generation sequencing.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Protocol used to perform the service.
+ placeholder: need to be modeled for the proper kind of service (production services)
+ realizes protocol
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ uses_software
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Placeholder needs to be redesign
+ Sequence analysis software.
+ Software used to perform the service.
+ true
+ uses software
+
+
+
+
+
+
+
+
+
+
+
+
+
+ related_technique
+ Flow cytometry is a related technique for a flow cytometer instrument.
+ Method in which the resource can be used.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ related technique
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ used_to_study
+ A study of hibernation in bears.
+ Biological process studied in the organism.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ used to study
+
+
+
+
+
+
+
+
+
+
+
+ has_residency_requirement
+ A research opportunity requires applicants to be US citizens.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ US residency status of applicants that may apply for the student research opportunity.
+ has residency requirement
+
+
+
+
+
+
+
+
+
+
+
+ related_research_project
+ A research project studying breast cancer.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Research project during which the biological specimen was collected.
+ related research project
+
+
+
+
+
+
+
+
+
+
+
+ related_biological_specimen
+ A breast cancer specimen.
+ Biological specimen collected as part of the research project.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ related biological specimen
+
+
+
+
+
+
+
+
+
+
+
+ has_preparation_technique
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Paraffin embedding of tissue.
+ Technique used to prepare the biological specimen.
+ has preparation technique
+
+
+
+
+
+
+
+
+
+
+
+
+ has_phase
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ Phase 1 clinical trial.
+ Phase of a clinical trial to evaluate risk and to clinically evaluate the efficacy of drugs or biologicals.
+ has phase
+
+
+
+
+
+
+
+
+
+
+ performs_human_study
+ Human study performed by the organization.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ The Jackson Heart Institute performs human studies on heart disease.
+ performs human study
+
+
+
+
+
+
+
+
+
+
+
+
+ human_study_performed_by
+ Jackson State University performs human studies on heart disease.
+ Organization that performs the human study.
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ human study performed by
+
+
+
+
+
+
+
+
+
+
+
+
+ has_format
+
+
+
+
+
+
+
+
+
+ has_software_license
+ Is a legal instrument (usually by way of contract law) governing the usage or redistribution of software.
+ PERSON: Scott Hoffmann
+ http://en.wikipedia.org/wiki/Software_license
+
+
+
+
+
+
+
+
+
+
+ objective_achieved_by_operation
+ Links an objective to a software operation whise execution achieves the objective. Is different from OBI:objective_achieved_by which links an objective to the process that achieves it.
+ PERSON:Matthew Brush
+ PERSON:Matthew Brush
+ a relation between a software objective (data transformation objective) and an operation whose execution in a software tool achieves the objective
+ software relation expanding to something like:
+
+objective_achieved_by some ('software/algorithm execution' and (specified_by some 'data processing operation'))
+
+
+
+
+
+
@@ -1570,823 +2140,6 @@ functioning) and indirectly_realizes.
-
-
-
-
-
-
-
-
-
-
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-
-
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-
-
-
-
-
-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
- realizable_entity
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- research project
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- monoclonal antibody reagent
-
-
-
-
-
-
-
- construct
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- viral plasmid
-
-
-
-
-
-
-
- nucleic acid reagent
-
-
-
-
-
-
-
-
-
-
-
-
-
- non viral organism
-
-
-
-
-
-
-
- reagent library
-
-
-
-
-
-
-
- gene knockdown reagent
-
-
-
-
-
-
-
- hybridoma cell line
-
-
-
-
-
-
-
- immunotechnique
-
-
-
-
-
-
-
- material antibody target
-
-
-
-
-
-
-
- biological target
-
-
-
-
-
-
-
- immunogenic material
-
-
-
-
-
-
-
- data
-
-
-
-
-
-
-
- biospecimen preparation
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- objective specification
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- mammalian phenotype
-
-
-
-
-
-
-
-
-
-
-
-
-
- homo sapiens
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- microarray
-
-
-
-
-
-
-
- disease
-
-
-
-
-
-
-
- pato quality
-
-
-
-
-
-
-
-
-
-
-
-
-
- anatomical entity
-
-
-
-
-
-
-
- event
-
-
-
-
-
-
-
- phase (ocre)
-
-
-
-
-
-
-
-
-
-
-
-
-
- patent
-
-
-
-
-
-
-
- association
-
-
-
-
-
-
-
- center
-
-
-
-
-
-
-
- consortium
-
-
-
-
-
-
-
- core laboratory
-
-
-
-
-
-
-
- course
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- foundation
-
-
-
-
-
-
-
- funding organization
-
-
-
-
-
-
-
- geographic location
-
-
-
-
-
-
-
- geographic region
-
-
-
-
-
-
-
- grant
-
-
-
-
-
-
-
- institute
-
-
-
-
-
-
-
- laboratory
-
-
-
-
-
-
-
- library
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
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-
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-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
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-
-
-
-
-
-
-
-
-
-
-
-
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-
-
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-
-
-
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-
-
-
-
-
-
-
-
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-
-
-
-
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-
-
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-
-
-
-
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-
-
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-
-
-
-
-
-
-
-
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-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- agent
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
+
diff --git a/productMods/WEB-INF/filegraph/tbox/other.owl b/productMods/WEB-INF/filegraph/tbox/other.owl
new file mode 100644
index 00000000..ee5c82e8
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/other.owl
@@ -0,0 +1,111 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ rate measurement datum
+
+
+
+
+
+
+
+
+ rate unit
+
+
+
+
+
+
+
+
+ urllink
+ The full URL.
+ Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it.
+ http://info.slis.indiana.edu/~katy/
+
+
+
+
+
+
+
+
+
+
+
+
+
+ count per year
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/outreach.owl b/productMods/WEB-INF/filegraph/tbox/outreach.owl
new file mode 100644
index 00000000..e0398e44
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/outreach.owl
@@ -0,0 +1,61 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ outreach provider role
+ An outreach or community service role directed outside a person's primary profession and institution
+ Communicating Astronomy to the Public
+ The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here.
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/process.owl b/productMods/WEB-INF/filegraph/tbox/process.owl
new file mode 100644
index 00000000..56a049ad
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/process.owl
@@ -0,0 +1,85 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ advising process
+
+
+
+
+
+
+
+ attending process
+
+
+
+
+
+
+
+ presenting process
+
+
+
+
+
+
+
+ project
+ An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
+ An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/publication.owl b/productMods/WEB-INF/filegraph/tbox/publication.owl
new file mode 100644
index 00000000..776e541f
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/publication.owl
@@ -0,0 +1,1230 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ journal article
+
+ Examples are articles published in the journals, Nature and Science. The content can often be cited by reference to a paper based encoding, e.g. Authors, Title of article, Journal name, date or year of publication, volume and page number.
+ OBI_0000159
+ a report that is published in a journal
+ group:OBI
+ journal article
+ person:Alan Ruttenberg
+ person:Chris Stoeckert
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ academic article
+
+ A specific academic journal article
+ Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography
+ http://purl.org/ontology/bibo/
+ A scholarly academic article, typically published in a journal.
+ stable
+
+
+
+
+
+
+
+ article
+
+ A specific journal article
+ A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book
+ Short Definition modified from the bibo ontology.
+ http://purl.org/ontology/bibo/
+ stable
+ A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine.
+
+
+
+
+
+
+
+ audio document
+
+ Recorded audio in any format
+ http://purl.org/ontology/bibo/
+ phonograph record; tape; CD; DVD; DAT
+ stable
+ An audio document; aka record.
+
+
+
+
+
+
+
+ audio-visual document
+
+ Audiovisual recording in any format
+ film; video; Blu-ray
+ http://purl.org/ontology/bibo/
+ An audio-visual document; film, video, and so forth.
+ stable
+
+
+
+
+
+
+
+ bill
+
+ Draft legislation presented for discussion to a legal body
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ stable
+ Draft legislation presented for discussion to a legal body.
+
+
+
+
+
+
+
+ book
+
+ A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers
+ Short Definition copied from bibo ontology
+ http://purl.org/ontology/bibo/
+ A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers.
+ stable
+
+
+
+
+
+
+
+ book section
+
+ A section of a book
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ unstable
+ A section of a book.
+
+
+
+
+
+
+
+ brief
+
+ A document stating the facts and points of law of a client's case
+ http://purl.org/ontology/bibo/
+ unstable
+ A written argument submitted to a court.
+
+
+
+
+
+
+
+ chapter (bibo)
+
+ A main division of a book
+ http://purl.org/ontology/bibo/
+ A chapter of a book.
+ unstable
+
+
+
+
+
+
+
+ code (bibo)
+
+ A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies
+ Code of Federal Regulations
+ Short Definition from OCLC Input Standards, EntW
+ http://purl.org/ontology/bibo/
+ A collection of statutes.
+ stable
+
+
+
+
+
+
+
+ collected document
+
+ Short Definition is the Medical Subject Heading (MeSH) definition
+ Work consisting of collections of previously published works
+ http://purl.org/ontology/bibo/
+ stable
+ A document that simultaneously contains other documents.
+
+
+
+
+
+
+
+ collection (bibo)
+
+ Collection of information resources that have a unified identity
+ Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license.
+ Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection
+ http://purl.org/ontology/bibo/
+ stable
+ A collection of Documents or Collections
+
+
+
+
+
+
+
+ conference
+
+ 2010 International Congress on Autoimmunity; American Libraries Association 2009
+ A meeting for consultation or discussion.
+ core:Seminar and bibo:Conference are very similar.
+ http://purl.org/ontology/bibo/
+ A meeting for consultation or discussion.
+ stable
+
+
+
+
+
+
+
+ court reporter
+
+ Collection of legal cases
+ Supreme Court Reporter
+ http://purl.org/ontology/bibo/
+ stable
+ A collection of legal cases.
+
+
+
+
+
+
+
+ document
+
+ A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ A collection of information content entities intended to be understood together as a whole
+ A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information.
+ A journal article, patent application, laboratory notebook, or a book
+ PERSON: Lawrence Hunter
+ document
+
+
+
+
+
+
+
+
+
+ document part
+
+ A distinct part of a larger document or collected document
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ a distinct part of a larger document or collected document.
+ unstable
+
+
+
+
+
+
+
+ edited book
+
+ An edited collection of stand-alone articles published as a book
+ Best American Science Writing 2009
+ http://purl.org/ontology/bibo/
+ stable
+ An edited book.
+
+
+
+
+
+
+
+ excerpt
+
+ A passage selected from a larger work
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ stable
+ A passage selected from a larger work.
+
+
+
+
+
+
+
+ film
+
+ Audiovisual recording in film format
+ http://purl.org/ontology/bibo/
+ aka movie.
+ stable
+
+
+
+
+
+
+
+ hearing
+
+ An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
+ Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/ontology/bibo/
+ An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
+ stable
+
+
+
+
+
+
+
+ image
+
+
+
+ A visual representation such as a photograph or graph
+ http://purl.org/ontology/bibo/
+ photograph; diagram
+ A document that presents visual or diagrammatic information.
+ stable
+
+
+
+
+
+
+
+ interview
+
+ A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee.
+ http://purl.org/ontology/bibo/
+ radio or newspaper interview
+ A formalized discussion between two or more people.
+ stable
+
+
+
+
+
+
+
+ issue (bibo c)
+
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ something that is printed or published and distributed, esp. a given number of a periodical
+ something that is printed or published and distributed, esp. a given number of a periodical
+ stable
+
+
+
+
+
+
+
+ journal
+
+ Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science.
+ Contains original scholarly research or review articles by experts in the field
+ Journal of Information Science; IEEE Intelligent System; Scientometrics
+ http://purl.org/ontology/bibo/
+ stable
+ A periodical of scholarly journal Articles.
+
+
+
+
+
+
+
+ legal case document
+
+ Official court papers for a case
+ http://purl.org/ontology/bibo/
+ A document accompanying a legal case.
+ unstable
+
+
+
+
+
+
+
+ decision
+
+ The written determination of a case, motion or claim by a court or tribunal
+ http://purl.org/ontology/bibo/
+ unstable
+ A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law.
+
+
+
+
+
+
+
+ legal document
+
+ a document that states some contractual relationship or grants some right
+ http://purl.org/ontology/bibo/
+ A legal document; for example, a court decision, a brief, and so forth.
+ stable
+
+
+
+
+
+
+
+ legislation
+
+ Enactments of legislative bodies, published in either statute or code form
+ From OCLC Input Standards, EntW
+ http://purl.org/ontology/bibo/
+ A legal document proposing or enacting a law or a group of laws.
+ unstable
+
+
+
+
+
+
+
+ letter
+
+ A written or printed communication addressed to a person or organization and usually transmitted by mail
+ A written or printed communication addressed to a person or organization and usually transmitted by mail
+
+
+
+
+
+
+
+ magazine
+
+ Abstracts and bibliographies are usually not included in magazines.
+ Contains articles of current events or general interest, geared to the reading public as being informative or recreational
+ New Yorker
+ http://purl.org/ontology/bibo/
+ A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports.
+ stable
+
+
+
+
+
+
+
+ manual
+
+ A book of instructions or guide to a specific topic
+ SDB User Manual
+ http://purl.org/ontology/bibo/
+ A small reference book, especially one giving instructions.
+ unstable
+
+
+
+
+
+
+
+ manuscript
+
+ Short Definition is the Medical Subject Heading (MeSH) definition
+ Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies
+ http://purl.org/ontology/bibo/
+ An unpublished Document, which may also be submitted to a publisher for publication.
+ stable
+
+
+
+
+
+
+
+ map
+
+ A graphical depiction of geographic features, scientific discipline, scientific data analytical results
+ The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps.
+ http://purl.org/ontology/bibo/
+ A graphical depiction of geographic features.
+ unstable
+
+
+
+
+
+
+
+ newspaper
+
+ Contains news articles, opinions, features, advertising, and is usually issued daily or weekly
+ USA Today
+ http://purl.org/ontology/bibo/
+ stable
+ A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising.
+
+
+
+
+
+
+
+ note (bibo c)
+
+ Notes or annotations about a resource
+ Short Definition from bibo ontology
+ http://purl.org/ontology/bibo/
+ stable
+ Notes or annotations about a resource.
+
+
+
+
+
+
+
+ patent
+
+ (from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years
+ A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)
+ http://purl.org/ontology/bibo/
+ stable
+ A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years.
+
+
+
+
+
+
+
+ performance
+
+ Something carried out, acted or rendered.
+ http://purl.org/ontology/bibo/
+ unstable
+ A public performance.
+
+
+
+
+
+
+
+ periodical
+
+ http://purl.org/ontology/bibo/
+ stable
+ A group of related documents issued at regular intervals.
+
+
+
+
+
+
+
+ personal communication document
+
+ A personal communication manifested in some document.
+ A personal communication manifested in some document.
+
+
+
+
+
+
+
+ proceedings
+
+ A compilation of documents published from an event, such as a conference
+ Short Definition copied from bibo ontology
+ http://purl.org/ontology/bibo/
+ unstable
+ A compilation of documents published from an event, such as a conference.
+
+
+
+
+
+
+
+ quote
+
+ An excerpted collection of words
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ An excerpted collection of words.
+ stable
+
+
+
+
+
+
+
+ reference source
+
+ A document that presents authoritative reference information, such as a dictionary or encylopedia
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ unstable
+ A document that presents authoritative reference information, such as a dictionary or encylopedia .
+
+
+
+
+
+
+
+ report
+
+ A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.
+ Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles.
+ http://purl.org/ontology/bibo/
+ stable
+ A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc..
+
+
+
+
+
+
+
+ series
+
+ A thematic collection of documents, usually books, issued at regular or irregular intervals
+ Methods in Molecular Biology
+ http://purl.org/ontology/bibo/
+ A loose, thematic, collection of Documents, often Books.
+ stable
+
+
+
+
+
+
+
+ slide
+
+ A slide in a slideshow
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ A slide in a slideshow
+ unstable
+
+
+
+
+
+
+
+ slideshow
+
+ A presentation of a series of slides, usually presented in front of an audience with written text and images
+ Short Definition from the bibo ontology
+ http://purl.org/ontology/bibo/
+ A presentation of a series of slides, usually presented in front of an audience with written text and images.
+ stable
+
+
+
+
+
+
+
+ standard
+
+ A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry
+ Short Definition from OCLC Input Standards, EntW
+ http://purl.org/ontology/bibo/
+ A document describing a standard
+ stable
+
+
+
+
+
+
+
+ statute
+
+ A bill enacted into law
+ Short Definition from bibo ontology
+ http://purl.org/ontology/bibo/
+ A bill enacted into law.
+ stable
+
+
+
+
+
+
+
+ thesis
+
+ Short Definition from OCLC Input Standards, EntW
+ Works created to satisfy the requirements for an academic certification or degree; also called dissertation
+ http://purl.org/ontology/bibo/
+ A document created to summarize research findings associated with the completion of an academic degree.
+ stable
+
+
+
+
+
+
+
+ webpage
+
+ One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web
+ http://purl.org/ontology/bibo/
+ A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print.
+ unstable
+
+
+
+
+
+
+
+ website
+
+ A group of webpages available within a specific parent address or URL on the World Wide Web
+ Facebook; VIVOweb.org; Flickr
+ http://purl.org/ontology/bibo/
+ A group of Webpages accessible on the Web.
+ unstable
+
+
+
+
+
+
+
+ workshop
+
+ Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc.
+ http://purl.org/ontology/bibo/
+ A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc.
+ stable
+
+
+
+
+
+
+
+ bibliographic information source
+
+ A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.
+
+
+
+
+
+
+
+ global citation count
+
+ The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.
+
+
+
+
+
+
+
+ clinical guideline
+
+ A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.
+ A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.
+
+
+
+
+
+
+
+ comment
+
+ A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by
+ A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program.
+
+has super-classes
+
+
+
+
+
+
+
+ erratum
+
+ A formal correction to an error introduced by the publisher into a previously published document.
+ A formal correction to an error introduced by the publisher into a previously published document.
+
+
+
+
+
+
+
+ authorship
+
+
+ Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers.
+This class allows for linking an author to a publication while indicating information about that author's authorship.
+ Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication.
+ Currently any abstract name is given to members of this class. This could change in the future.
+
+
+
+
+
+
+
+ blog
+
+ Blog is short for weblog.
+ Library of Congress Blog
+ Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger
+
+
+
+
+
+
+
+ blog posting
+
+ A specific blog posting
+ An online article or commentary appearing on a blog
+
+
+
+
+
+
+
+ case study
+
+ A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis.
+ A qualitative descriptive research study of individuals or a group
+
+
+
+
+
+
+
+ catalog
+
+ A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them
+ NLM Catalog
+ Short Definition is the Medical Subject Heading (MeSH) definition
+
+
+
+
+
+
+
+ conference paper
+
+ A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue
+
+
+
+
+
+
+
+ conference poster
+
+ The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented
+
+
+
+
+
+
+
+ database (vivo)
+
+ A structured file of information or a set of logically related data stored and retrieved using computer-based means
+ PubMed
+ Short Definition is the Medical Subject Heading (MeSH) definition
+
+
+
+
+
+
+
+ dataset
+
+ A named collection of data, usually containing only one type of data
+ US Patent Data; US Job Data
+
+
+
+
+
+
+
+ editor role
+ An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
+ An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
+
+
+
+
+
+
+
+ editorial article
+
+ An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces
+
+
+
+
+
+
+
+ f1000 link
+
+ F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews.
+
+
+
+
+
+
+
+ invited talk
+
+
+
+
+
+
+
+
+ news release
+
+ A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature.
+
+
+
+
+
+
+
+ newsletter
+
+ The Ornithological Newsletter
+ Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public
+
+
+
+
+
+
+
+ peer reviewer role
+
+ A role of peer reviewing
+ is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing.
+Contents
+[hide]
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ research proposal
+
+ A proposal for a research grant that has been submitted but not approved; does not represent an existing activity
+
+
+
+
+
+
+
+ review
+
+ An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)
+
+
+
+
+
+
+
+ reviewer role
+ A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
+ A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
+
+
+
+
+
+
+
+ score
+
+ Written musical composition for voice or instruments or both
+
+
+
+
+
+
+
+ screenplay
+
+ Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions
+
+
+
+
+
+
+
+ speech
+
+ Text of a speech written in preparation for delivery of the speech.
+
+
+
+
+
+
+
+ translation
+
+ The result of rendering a work from one language to another
+
+
+
+
+
+
+
+
+
+
+
+
+
+ video (vivo)
+
+ Audiovisual recording in video format
+
+
+
+
+
+
+
+ working paper
+
+ A document created as a basis for discussion or a very early draft of a formal paper
+
+
+
+
+
+
+
+
+
+
+
+
+ accepted
+ Accepted for publication after peer reviewing
+
+
+
+
+
+
+
+ peer reviewed
+ Peer review is the process by which articles are chosen to be included in a refereed journal. An editorial board consisting of experts in the same field as the author review the article and decide if it is authoritative enough for publication.
+
+
+
+
+
+
+
+ published
+ Published document
+
+
+
+
+
+
+
+ in press
+ Document to be published
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/relationship.owl b/productMods/WEB-INF/filegraph/tbox/relationship.owl
new file mode 100644
index 00000000..336ede56
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/relationship.owl
@@ -0,0 +1,192 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ award or honor receipt
+
+ The award bestowed may be represented with the Award class.
+ The bestowal of an award, honor, or distinction to a person or person's at a particular time.
+
+
+
+
+
+
+
+ awarded degree
+
+ The awarding of a degree by an agent to another agent. It is mostly for academic degrees.
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ editorship
+
+ A relationship that represents the recognition of an agent as an editor.
+
+
+
+
+
+
+
+ faculty administrative position
+
+ An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)
+ Associate Dean
+ That is a position held by an academic faculty member who works for administration.
+
+
+
+
+
+
+
+ faculty position
+
+ Academic position in a university or institution
+ Professor, associate professor and assistant professor are common positions for academic faculty.
+ Professor; Associate Professor; Assistant Professor
+
+
+
+
+
+
+
+ librarian position
+
+ A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials
+ It is the common position in libraries.
+ Librarian; Library Systems Analyst; Music Bibliographer
+
+
+
+
+
+
+
+ non-academic position
+
+ A position classified as professional, staff, support, or any other non-academic role
+ Accounting & Research Services Assistant; Director of Information Technology
+ Staff, support, and other non-academic positions.
+
+
+
+
+
+
+
+ non-faculty academic position
+
+ A position involving academic work but without faculty status
+ Researcher; Academic Extension Associate; Postdoctoral Associate
+ Those positions are held by people who do academic work but do not have faculty positions in universities or institutes.
+
+
+
+
+
+
+
+ position (vivo)
+
+ An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified.
+ Director of Admissions and Placement; Associate University Librarian
+ Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position.
+
+
+
+
+
+
+
+ postdoctoral position
+
+ A postdoctoral training appointment (job)
+
+
+
+
+
+
+
+ primary position
+
+ A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position.
+ A position designated as primary by the organization where it is held.
+
+
+
+
+
+
+
+ relationship
+ a reified relationship
+ functions as an n-ary predicate
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/research-resource-iao.owl b/productMods/WEB-INF/filegraph/tbox/research-resource-iao.owl
new file mode 100644
index 00000000..43b37ea3
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/research-resource-iao.owl
@@ -0,0 +1,709 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ measurement unit label
+
+ 2009-03-16: provenance: a term measurement unit was
+proposed for OBI (OBI_0000176) , edited by Chris Stoeckert and
+Cristian Cocos, and subsequently moved to IAO where the objective for
+which the original term was defined was satisfied with the definition
+of this, different, term.
+ 2009-03-16: review of this term done during during the OBI workshop winter 2009 and the current definition was considered acceptable for use in OBI. If there is a need to modify this definition please notify OBI.
+ A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.
+ Examples of measurement unit labels are liters, inches, weight per volume.
+ PERSON: Alan Ruttenberg
+ PERSON: Melanie Courtot
+ measurement unit label
+
+
+
+
+
+
+
+
+
+ objective specification
+
+ Answers the question, why did you do this experiment?
+ OBI Plan and Planned Process/Roles Branch
+ OBI_0000217
+ PERSON: Alan Ruttenberg
+ PERSON: Barry Smith
+ PERSON: Bjoern Peters
+ PERSON: Jennifer Fostel
+ a directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.
+ objective specification
+ purpose of a study; support of hypothesis, discovery of new information
+
+
+
+
+
+
+
+
+
+ action specification
+
+ Alan Ruttenberg
+ OBI Plan and Planned Process branch
+ Pour the contents of flask 1 into flask 2
+ a directive information entity that describes an action the bearer will take
+
+
+
+
+
+
+
+
+
+ datum label
+
+ 9/22/11 BP: changed the rdfs:label for this class from 'label' to 'datum label' to convey that this class is not intended to cover all kinds of labels (stickers, radiolabels, etc.), and not even all kind of textual labels, but rather the kind of labels occuring in a datum.
+
+ A label is a symbol that is part of some other datum and is used to either partially define the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label
+ GROUP: IAO
+ datum label
+ http://www.golovchenko.org/cgi-bin/wnsearch?q=label#4n
+
+
+
+
+
+
+
+
+
+ data item
+
+ 2/2/2009 Alan and Bjoern discussing FACS run output data. This is a data item because it is about the cell population. Each element records an event and is typically further composed a set of measurment data items that record the fluorescent intensity stimulated by one of the lasers.
+ 2009-03-16: data item deliberatly ambiguous: we merged data set and datum to be one entity, not knowing how to define singular versus plural. So data item is more general than datum.
+ 2009-03-16: removed datum as alternative term as datum specifically refers to singular form, and is thus not an exact synonym.
+ Data items include counts of things, analyte concentrations, and statistical summaries.
+ JAR: datum -- well, this will be very tricky to define, but maybe some
+information-like stuff that might be put into a computer and that is
+meant, by someone, to denote and/or to be interpreted by some
+process... I would include lists, tables, sentences... I think I might
+defer to Barry, or to Brian Cantwell Smith
+
+JAR: A data item is an approximately justified approximately true approximate belief
+ PERSON: Alan Ruttenberg
+ PERSON: Chris Stoeckert
+ PERSON: Jonathan Rees
+ a data item is an information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.
+ data
+ data item
+
+
+
+
+
+
+
+
+
+ information content entity
+
+
+
+
+
+
+
+ Examples of information content entites include journal articles, data, graphical layouts, and graphs.
+ OBI_0000142
+ PERSON: Chris Stoeckert
+ an information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity
+ information content entity
+ information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907).
+
+Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity.
+
+
+
+
+
+
+
+
+
+ scalar measurement datum
+
+ 10 feet. 3 ml.
+ 2009-03-16: we decided to keep datum singular in scalar measurement datum, as in
+this case we explicitly refer to the singular form
+ PERSON: Alan Ruttenberg
+ PERSON: Melanie Courtot
+ Would write this as: has_part some 'measurement unit label' and has_part some numeral and has_part exactly 2, except for the fact that this won't let us take advantage of OWL reasoning over the numbers. Instead use has measurment value property to represent the same. Use has measurement unit label (subproperty of has_part) so we can easily say that there is only one of them.
+ a scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.
+
+
+
+
+
+
+
+
+ directive information entity
+
+ 8/6/2009 Alan Ruttenberg: Changed label from "information entity about a realizable" after discussions at ICBO
+ An information content entity whose concretizations indicate to their bearer how to realize them in a process.
+ PERSON: Alan Ruttenberg
+ PERSON: Bjoern Peters
+ Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan
+
+
+
+
+
+
+
+
+
+ curation status specification
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)
+ GROUP:OBI:<http://purl.obolibrary.org/obo/obi>
+ OBI_0000266
+ PERSON:Bill Bug
+ The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
+ curation status specification
+
+
+
+
+
+
+
+
+ data about an ontology part
+
+ Person:Alan Ruttenberg
+ data about an ontology part is a data item about a part of an ontology, for example a term
+
+
+
+
+
+
+
+ plan specification
+
+ 2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was " a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term.
+ Alan Ruttenberg
+ Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved
+ OBI Plan and Planned Process branch
+ OBI_0000344
+ PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice.
+ a directive information entity that when concretized it is realized in a process in which the bearer tries to achieve the objectives, in part by taking the actions specified. Plan specifications includes parts such as objective specification, action specifications and conditional specifications.
+ plan specification
+
+
+
+
+
+
+
+
+
+ measurement datum
+
+ 2/2/2009 is_specified_output of some assay?
+ A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device.
+ Examples of measurement data are the recoding of the weight of a mouse as {40,mass,"grams"}, the recording of an observation of the behavior of the mouse {,process,"agitated"}, the recording of the expression level of a gene as measured through the process of microarray experiment {3.4,luminosity,}.
+ OBI_0000305
+ group:OBI
+ measurement datum
+ person:Chris Stoeckert
+
+
+
+
+
+
+
+
+ conclusion textual entity
+
+ 2009/09/28 Alan Ruttenberg. Fucoidan-use-case
+ 2009/10/23 Alan Ruttenberg: We need to work on the definition still
+ A textual entity that expresses the results of reasoning about a problem, for instance as typically found towards the end of scientific papers.
+ Person:Alan Ruttenberg
+ conclusion textual entity
+ that fucoidan has a small statistically significant effect on AT3 level but no useful clinical effect as in-vivo anticoagulant, a paraphrase of part of the last paragraph of the discussion section of the paper 'Pilot clinical study to evaluate the anticoagulant activity of fucoidan', by Lowenthal et. al.PMID:19696660
+
+
+
+
+
+
+
+
+
+ obsolescence reason specification
+
+
+
+
+
+
+
+
+
+
+
+
+ PERSON: Alan Ruttenberg
+ PERSON: Melanie Courtot
+ The creation of this class has been inspired in part by Werner Ceusters' paper, Applying evolutionary terminology auditing to the Gene Ontology.
+ The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
+ obsolescence reason specification
+
+
+
+
+
+
+
+
+ textual entity
+
+ A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc.
+ AR, (IAO call 2009-09-01): a document as a whole is not typically a textual entity, because it has pictures in it - rather there are parts of it that are textual entities. Examples: The title, paragraph 2 sentence 7, etc.
+ MC, 2009-09-14 (following IAO call 2009-09-01): textual entities live at the FRBR (http://en.wikipedia.org/wiki/Functional_Requirements_for_Bibliographic_Records) manifestation level. Everything is significant: line break, pdf and html versions of same document are different textual entities.
+ PERSON: Lawrence Hunter
+ Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities
+ text
+ textual entity
+
+
+
+
+
+
+
+ denotator type
+
+
+
+
+
+
+
+
+
+
+ A denotator type indicates how a term should be interpreted from an ontological perspective.
+ Alan Ruttenberg
+ Barry Smith, Werner Ceusters
+ The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are "natural kinds" and the latter arbitrary collections of entities.
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ example to be eventually removed
+
+
+
+
+
+
+
+
+ failed exploratory term
+ Person:Alan Ruttenberg
+ The term was used used in an attempt to structure part of the ontology but in retrospect failed to do a good job
+
+
+
+
+
+
+
+
+ metadata complete
+ Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete.
+
+
+
+
+
+
+
+
+ organizational term
+ term created to ease viewing/sort terms for development purpose, and will not be included in a release
+
+
+
+
+
+
+
+
+ ready for release
+ Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release."
+
+
+
+
+
+
+
+
+ metadata incomplete
+ Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors.
+
+
+
+
+
+
+
+
+ uncurated
+ Nothing done yet beyond assigning a unique class ID and proposing a preferred term.
+
+
+
+
+
+
+
+
+ pending final vetting
+ All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor.
+
+
+
+
+
+
+
+
+ core
+ Core is an instance of a grouping of terms from an ontology or ontologies. It is used by the ontology to identify main classes.
+ PERSON: Alan Ruttenberg
+ PERSON: Melanie Courtot
+
+
+
+
+
+
+
+
+ placeholder removed
+
+
+
+
+
+
+
+
+ terms merged
+ An editor note should explain what were the merged terms and the reason for the merge.
+
+
+
+
+
+
+
+
+ term imported
+ This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use.
+
+
+
+
+
+
+
+
+ term split
+ This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created.
+
+
+
+
+
+
+
+
+ universal
+ A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf
+ Alan Ruttenberg
+ Hard to give a definition for. Intuitively a "natural kind" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents.
+
+
+
+
+
+
+
+
+ defined class
+ "definitions", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal.
+ A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal
+ Alan Ruttenberg
+
+
+
+
+
+
+
+
+ named class expression
+ A named class expression is a logical expression that is given a name. The name can be used in place of the expression.
+ Alan Ruttenberg
+ named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions
+
+
+
+
+
+
+
+
+ to be replaced with external ontology term
+ Alan Ruttenberg
+ Terms with this status should eventually replaced with a term from another ontology.
+ group:OBI
+
+
+
+
+
+
+
+
+ requires discussion
+ A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues.
+ Alan Ruttenberg
+ group:OBI
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/research-resource.owl b/productMods/WEB-INF/filegraph/tbox/research-resource.owl
new file mode 100644
index 00000000..c3e0dfd5
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/research-resource.owl
@@ -0,0 +1,1323 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ instrument
+
+
+
+
+
+
+
+ A flow cytometer.
+ Material entity that is designed to have a function and play a role in scientific investigation.
+ PERSON: Melissa Haendel
+ See OBI listserv discussion for considerations in defining instrument. http://sourceforge.net/tracker/index.php?func=detail&aid=2894801&group_id=177891&atid=886178
+ http://en.wikipedia.org/wiki/Scientific_instrument
+ instrument
+
+
+
+
+
+
+
+
+ service
+
+ A DNA sequencing service performed by a core lab.
+ An information content entity that describes a service performed by a person or organization with the objective of performing a technique, providing training, providing storage of data or material entities, or providing access to resources for another person or organization
+ Coordinate with NIF. NIF ID: nlx_res_20090105
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+ service
+
+
+
+
+
+
+
+
+ reagent
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ A plasmid can be used as a reagent.
+ PERSON: Melissa Haendel
+ Placeholder for class to be imported from the Reagent Ontology (ReO).
+ Processed material that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
+ http://www.yourdictionary.com/reagent
+ reagent
+
+
+
+
+
+
+
+
+ technique
+
+ A technique is a planned process used to accomplish a specific activity or task.
+ Flow cytometry is a technique.
+ PERSON: Melissa Haendel
+ Protocol is added to eagle-i temporarily until a relationship between the informatio entity "protocol" and these planned processes is created. This class refers to the axtual process not the document
+ http://en.wikipedia.org/wiki/Technique
+
+
+
+
+
+
+
+
+ service provider role
+
+ A role inhering in a person or organization that is realized when the bearer participates in providing a service to meet the need of another person or thing.
+ A technician in a core laboratory.
+ An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession.
+ Member of the International Conference on Complex Systems Organizing Committee
+ PERSON: Nicole Vasilevsky
+ PERSON: Nicole Vasilevsky
+
+
+
+
+
+
+
+
+ research project
+
+
+
+
+
+
+
+ A funded collection of investigations as described in a research proposal.
+ A project to study the role of a specific protein in cell signaling.
+ Maybe SameAs "Investigation" but is the subject of funding
+ PERSON: Melissa Haendel
+ PERSON: Melissa Haendel
+
+
+
+
+
+
+
+
+ biological specimen
+
+
+
+
+
+
+
+ Heart tissue obtained from an organism.
+ Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, a population of organisms, or is a part of or derived from an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype.
+ PERSON: Melissa Haendel
+ Should have relationship to Organism
+ biological specimen
+ biospecimen
+ http://en.wikipedia.org/wiki/Specimen
+
+
+
+
+
+
+
+
+ software
+
+ A general term primarily used for digitally stored data such as computer programs and other kinds of information read and written by computers.
+ IAO is a planned specification, in SWO is an Information artifact. In eagle-i, we have a need to collect material instances and is it thus currently classified as a material entity.
+ Microsoft Word is commonly used word processing software.
+ PERSON: Melissa Haendel
+ http://en.wikipedia.org/wiki/Computer_software
+ software
+
+
+
+
+
+
+
+
+ access service
+
+ A service offering that describes a service in which the consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service.
+ Allowing access to a microscope in a core lab.
+ Coordinate with NIF
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ storage service
+
+ A computer server.
+ A service offering that describes a service in which the consumer provides some material or data as input which a service provider stores and returns as output.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ coordinate with NIF. NIF ID:nlx_res_20090419
+
+
+
+
+
+
+
+
+ training service
+
+ A service offering that describes a service in which the provider offers educational materials or events, such as courses, workshops or graduate programs, to the service consumer
+ Coordinate with NIF. NIF ID: nlx_res_20090444
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ Training a researcher to use a microscope.
+
+
+
+
+
+
+
+
+ material processing service
+
+ A service offering that describes a service in which the provider makes physical changes to a specified input material entity with the objective of producing a new material entity form input materials, or modifying the input material entity, and returning this as output to the service consumer
+ Biopsy service.
+ Coordinate with NIF: NIF ID: nlx_res_20090416
+ PERSON: Nicole Vasilevsky
+ http://neurolex.org/wiki/Category:Production_service_resource
+
+
+
+
+
+
+
+
+ material analysis service
+
+ An analysis service offering that describes a service in which the consumer provides some input material and a service provider performs some analysis of this material to generate data that is returned to the service consumer.
+ Coordinate with NIF: NIF ID: nlx_res_20090420
+ Flow cytometry analysis of T cells.
+ PERSON: Nicole Vasilevsky
+ http://neurolex.org/wiki/Category:Analysis_service_resource
+
+
+
+
+
+
+
+
+ material production service
+
+ A material processing service offering that describes a service in which the provider makes physical changes to a specified input material that produce a new entity as specified output that is returned the service consumer. The specified output of a material production service can be contained within, derived from, or synthesized from specified input materials, but it represents a material entity that is of a distinct type from any of the specified input materials.
+ Coordinate with NIF. NIF ID: nlx_res_20090418
+ PERSON: Matthew Brush
+ Production of monoclonal antibodies from a hybridoma.
+ http://neurolex.org/wiki/Category:Material_service_resource
+
+
+
+
+
+
+
+
+ data storage
+
+ A data transformation technique that involves the process of recording or retrieving information or data.
+ Information storage
+ PERSON: Karen Corday
+ Storing data on a server.
+ bulk data storage
+ data storage
+ http://en.wikipedia.org/wiki/Data_storage
+ research data storage
+
+
+
+
+
+
+
+
+
+
+ risk management
+
+ A technique used for identification, assessment, and prioritization of risks followed by coordinated and economical application of resources to minimize, monitor, and control the probability and/or impact of unfortunate events or to maximize the realization of opportunities.
+ PERSON: Nicole Vasilevsky
+ http://en.wikipedia.org/wiki/Risk_management
+
+
+
+
+
+
+
+
+
+
+
+ data entry
+
+ A data transformation technique that involves transcribing some form of data into another form, usually a computer program.
+ Entry of data about research resources into eagle-i.
+ PERSON: Nicole Vasilevsky
+ http://www.wisegeek.com/what-is-data-entry.htm
+
+
+
+
+
+
+
+
+ bioinformatics analysis
+
+ A data transformation technique that involves the analysis of bioinformatics data, which is the application of statistics and computer science to the field of molecular biology.
+ Analysis of DNA sequence data.
+ PERSON: Nicole Vasilevsky
+ http://en.wikipedia.org/wiki/Bioinformatics
+
+
+
+
+
+
+
+
+ research electronic datacapture
+
+ A technique designed for the collection of clinical data in electronic format for use mainly in human clinical trials.
+ Electronic health records.
+ PERSON: Nicole Vasilevsky
+ clinical database development
+ http://en.wikipedia.org/wiki/Electronic_data_capture
+
+
+
+
+
+ licensing
+
+ A technique that authorizes a use (such as copying software or using a (patented) invention) to a licensee, sparing the licensee from a claim of infringement brought by the licensor.
+ Licensing of a new technology.
+ PERSON: Nicole Vasilevsky
+ http://en.wikipedia.org/wiki/License
+
+
+
+
+
+
+
+
+ transport service
+
+ A service offering that describes a service in which the provider facilitates the transport of some material entity to a specified destination for the service consumer.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ Transport of a patient within a hospital.
+
+
+
+
+
+
+
+
+ support service
+
+ A service offering that describes a service in which the provider assists the consumer in activities directly or indirectly associated with the production and analysis or experimental research data.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ Technical support.
+
+
+
+
+
+
+
+
+ material storage service
+
+ A storage service offering that describes a service in which the consumer provides some material as input which a service provider stores and returns as output
+ Cryopreservation service.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ data storage service
+
+ A storage service offering that describes a service in which the consumer provides data as input, which a service provider stores and returns as output in its original form.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ Storing data on a server.
+
+
+
+
+
+
+
+
+ maintenance service
+
+ A service offering that describes a service in which the provider actively maintains a material or data resource (e.g. a model organism colony or database) for the service consumer. This may involved making physical alterations to the material or data with the goal of maintaining its integrity or features.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ material maintenance service
+
+ A maintenance service offering that describes a service in which the provider actively maintains a material resource (e.g. a model organism colony) for the service consumer. A material maintenance service may or may not include storage of the material input.
+ Maintaining an animal coloy.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ data maintenance service
+
+ A maintenance service offering that describes a service in which the provider actively manages or maintains data or a database for the service consumer. Maintenance of the data is performed to maintain its integrity or enhance its quality or utility for the consumer, but new data is not generated as a result of the maintenance.
+ Maintaining a database.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ analysis service
+
+ A service offering that describes a service in which the consumer provides some input material or data and a service provider returns data about the input material or data.
+ Flow cytometry analysis service.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ data analysis service
+
+ An analysis service offering that describes a service in which the consumer provides some input data and a service provider transforms, models, or interprets the input data and returns this generated data as output
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+ Sequence data analysis.
+ data processing service
+ data transformation service
+
+
+
+
+
+
+
+
+ material modification service
+
+ A material processing service offering that describes a service in which the provider makes physical modifications to a specified input material, such that at least one of the specified outputs of this process is a modified version of a specified input material.
+ Histology service.
+ PERSON: Matt Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+ database
+
+ A database is an organized collection of data, today typically in digital form.
+ Just a place horder. It will probably be replaced by NIF term: http://ontology.neuinfo.org/NIF/DigitalEntities/NIF-Resource.owl#nlx_res_20090405
+ PERSON: Carlo Torniai
+ http://en.wikipedia.org/wiki/Database
+
+
+
+
+
+ planned process
+
+ 'Plan' includes a future direction sense. That can be problematic if plans are changed during their execution. There are however implicit contingencies for protocols that an agent has in his mind that can be considered part of the plan, even if the agent didn't have them in mind before. Therefore, a planned process can diverge from what the agent would have said the plan was before executing it, by adjusting to problems encountered during execution (e.g. choosing another reagent with equivalent properties, if the originally planned one has run out.)
+ Bjoern Peters
+ Injecting mice with a vaccine in order to test its efficacy
+ branch derived
+ planned process
+ A processual entity that realizes a plan which is the concretization of a plan specification.
+ planned process
+
+
+
+
+
+
+
+
+ academic software license
+
+
+
+
+
+
+ software license
+
+
+
+
+
+
+
+
+
+
+ spreadsheet
+
+ A spreadsheet data format is one in which data is organised into a matrix (or matrices) of columns and rows to form cells in which values are entered.
+
+
+
+
+
+
+
+
+ xls spreadsheet
+
+ A spreadsheet data format designed for Microsoft Excel.
+
+
+
+
+
+
+
+
+ xml spreadsheet
+
+ A spreadsheet data format in which the structure of the data is described using XML, such as column and row headers and cell identity.
+
+
+
+
+
+
+
+
+ matlab m file
+
+
+
+
+
+
+
+
+
+ xml
+
+ Extensible Markup Language (XML) is a standard set of rules for encoding documents in a machine-readable form defined by the W3C.
+
+
+
+
+
+
+
+
+ rdf
+
+ http://www.w3.org/TR/REC-rdf-syntax/
+ The Resource Description Framework (RDF) is a general-purpose language for representing information in the Web.
+
+
+
+
+
+
+
+
+ rdf-xml
+
+
+ A serialisation of RDF into an XML format.
+
+
+
+
+
+
+
+
+ image format
+
+
+
+
+
+
+
+
+
+ dwg
+
+ http://en.wikipedia.org/wiki/.dwg
+ DWG ("drawing") is a binary file format used for storing two and three dimensional design data and metadata
+
+
+
+
+
+
+
+
+ dxf
+
+ http://en.wikipedia.org/wiki/AutoCAD_DXF
+ DXF (Drawing Interchange Format, or Drawing Exchange Format) is a CAD data file format developed by Autodesk for enabling data interoperability between AutoCAD and other programs.
+
+
+
+
+
+
+
+
+ bmp
+
+ http://www.fileformat.info/format/bmp/egff.htm
+ The BMP File Format is a Raster graphics image file format used to store bitmap digital images, independently of the display device (such as a graphics adapter).
+
+
+
+
+
+
+
+
+ cgm
+
+ Computer Graphics Metafile (CGM) is a free and open international standard file format for 2D vector graphics, raster graphics, and text, and is defined by ISO/IEC 8632.
+ http://en.wikipedia.org/wiki/Computer_Graphics_Metafile
+
+
+
+
+
+
+
+
+ web page specification
+
+
+
+
+
+
+
+
+
+ document exchange format
+
+
+
+
+
+
+
+
+
+ pdf
+
+ Portable Document Format
+ PDF is an open standard for document exchange.
+
+
+
+
+
+
+
+
+ tiff
+
+ Tagged Image File Format
+ TIFF is a flexible, adaptable file format for handling images and data within a single file, by including the header tags (size, definition, image-data arrangement, applied image compression) defining the image's geometry.
+
+
+
+
+
+
+
+
+ jpeg
+
+ JPEG is a lossy file format for storing images
+ JPG
+
+
+
+
+
+
+
+
+ png
+
+ Portable Network Graphics
+ PNG is a bitmapped image format and video codec that employs lossless data compression.
+
+
+
+
+
+
+
+
+ gif
+
+ The Graphics Interchange Format (GIF) is a bitmap image format. The format supports up to 8 bits per pixel thus allowing a single image to reference a palette of up to 256 distinct colors. The colors are chosen from the 24-bit RGB color space. It also supports animations and allows a separate palette of 256 colors for each frame. The color limitation makes the GIF format unsuitable for reproducing color photographs and other images with continuous color, but it is well-suited for simpler images such as graphics or logos with solid areas of color. [wikipedia]
+ Graphics Interchange Format
+
+
+
+
+
+
+
+
+ raster image format
+
+ A raster image is a format for representing a rectangular grid of dots (pixels) which contains information on the specific colour of each pixel.
+
+
+
+
+
+
+
+
+ vector image format
+
+ A vector image is a collection of connected lines and curves that produce objects. This geometric description enables the image to be displayed without loss at any size rendering.
+
+
+
+
+
+
+
+
+ svg
+
+ Scalable Vector Graphics
+
+
+
+
+
+
+
+
+ ai
+
+ Adobe Illustrator format
+
+
+
+
+
+
+
+
+ postscript
+
+ PostScript is a format used for describing documents.
+
+
+
+
+
+
+
+
+ tex
+
+ LaTeX format
+ tex is a format for documents written in the document markup language and document preparation system LaTeX.
+
+
+
+
+
+
+
+
+ outline document format
+
+ A format specification for data used or produced by outliner software
+
+
+
+
+
+
+
+
+ omnioutline format
+
+ A proprietary format for documents created and edited using OmniOutliner outliner software,
+
+
+
+
+
+
+
+
+ opml
+
+ OPML (Outline Processor Markup Language) is an XML format for outlines
+ Outline Processor Markup Language
+
+
+
+
+
+
+
+
+ jpeg 2000
+
+ JPEG 2000 is a compression standard enabling both lossless and lossy storage. The compression methods used are different from the ones in standard JFIF/JPEG; they improve quality and compression ratios, but also require more computational power to process. [wikipedia]
+
+
+
+
+
+
+
+
+ word processing document format
+
+
+
+
+
+
+
+
+
+ wordstar format
+
+
+
+
+
+
+
+
+
+ microsoft word doc
+
+ A file format for word processing documents for Microsoft Word.
+
+
+
+
+
+
+
+
+ programming language format
+
+
+
+
+
+
+
+
+
+ .java file
+
+ James Malone
+ A source code file format which is specified to be used with the Java programming language.
+
+
+
+
+
+
+
+
+ .class file
+
+ A format in which a .java file has been compiled into bytecode using a Java compiler and which is specified to be executed using the Java virtual machine.
+ James Malone
+
+
+
+
+
+
+
+
+ copasiml
+
+ .cps
+ An XML-based file format for use with the COPASI software.
+
+
+
+
+
+
+
+
+ sbml
+
+ Systems Biology Markup Language
+ Systems Biology Markup Language (SBML) is a machine-readable format for representing models. It's oriented towards describing systems where biological entities are involved in, and modified by, processes that occur over time.
+ http://sbml.org
+
+
+
+
+
+
+
+
+ owl-xml
+
+ The Web Ontology Language (OWL) in XML serialization
+
+
+
+
+
+
+
+
+ owl2-xml
+
+ Web Ontology Language version 2 in XML Serialization
+
+
+
+
+
+
+
+
+ obo flat file format
+
+ OBO format is the text file format used by OBO-Edit, the open source, platform-independent application for viewing and editing ontologies.
+
+
+
+
+
+
+
+
+ text file format
+
+
+
+
+
+
+
+
+
+ ascii format
+
+
+
+
+
+
+
+
+
+ plain text file format
+
+
+
+
+
+
+
+
+
+ mage tab format
+
+ MAGE-TAB is a tab delimited data format comprimising of ADF file for array design, IDFfor experimental design, SDRF for sample data relationships and associated data files.
+ http://www.mged.org/mage-tab/
+ A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
+
+
+
+
+
+
+
+
+ tab delimited file format
+
+
+
+
+
+
+
+
+
+ psi-mi format
+
+ Modified from http://wiki.cytoscape.org/GettingStarted, accessed 20 June 2012.
+ The PSI-MI format is an acronym for the Proteomics Standards Initiative - Molecular Interaction format. It provides an XML standard for molecular interactions and is supported by many molecular interaction databases and tools.
+ PSI-MIF
+
+
+
+
+
+
+
+
+ sif
+
+ http://wiki.cytoscape.org/GettingStarted and http://wiki.cytoscape.org/Cytoscape_User_Manual/Network_Formats, accessed 20 June 2012
+ SIF stands for Simple Interaction Format, and is a text format invented for Cytoscape. If the file contains any tab characters, then tabs are used to delimit the fields and spaces are considered part of the name. If the file contains no tabs, then any spaces are delimiters that separate names (and names cannot contain spaces).
+
+
+
+
+
+
+
+
+ gml
+
+ GML stands for Graph Markup Language, and is a standard network file format; supported by multiple generic network software packages
+ http://wiki.cytoscape.org/GettingStarted, accessed 20 June 2012
+
+
+
+
+
+
+
+
+ xgmml
+
+ XGMML stands for eXtensible Graph Markup and Modelling Language, and it is a XML standard; similar to but preferred over GML.
+ http://wiki.cytoscape.org/GettingStarted, accessed 20 June 2012
+
+
+
+
+
+
+
+
+ biopax rdf/xml format
+
+
+
+
+
+
+
+
+
+ biopax manchester owl syntax format
+
+
+
+
+
+
+
+
+
+ creative commons
+
+
+
+
+
+
+
+
+
+ proprietary commercial software license
+
+
+
+
+
+
+
+
+
+ mozilla public license version 1.1
+
+
+
+
+
+
+
+
+
+ gnu general public license
+
+
+
+
+
+
+
+
+
+ apache license v2
+
+
+
+
+
+
+
+
+
+ academic license version 3
+
+
+
+
+
+
+
+
+
+ freebsd license
+
+ 2 clause BSD License
+
+
+
+
+
+
+
+
+ open source software license
+
+
+
+
+
+
+
+
+
+ license without restrictions on derivatives
+
+
+
+
+
+
+
+
+
+ mit license
+
+
+
+
+
+
+
+
+
+ lesser gnu public license
+
+
+
+
+
+
+
+
+
+ the artistic license 1.0
+
+
+
+
+
+
+
+
+
+ eclipse public license
+
+
+
+
+
+
+
+
+
+ modified bsd license
+
+ 3 clause BSD License
+
+
+
+
+
+
+
+
+ latex project public license
+
+
+
+
+
+
+
+
+
+ open public license
+
+ http://wyatterp.com/opl.html
+
+
+
+
+
+
+
+
+ mozilla public license
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/research.owl b/productMods/WEB-INF/filegraph/tbox/research.owl
new file mode 100644
index 00000000..cb31ce2c
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/research.owl
@@ -0,0 +1,565 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ gene knockdown function
+
+ A perturb function that results in decreased expression levels of a target gene. This can be achieved through targeting a gene directly through gene knockout or modification of the its DNA sequence, or targeting of the mRNA product of a gene using technologies such as RNAi.
+ Gene repression function
+ Gene silencing function
+ Knockdown the function of a gene, to study the function of that gene.
+ PERSON: Matthew Brush
+ PERSON: Matthew Brush
+
+
+
+
+
+
+
+
+ rna interference function
+
+ A gene knockdown function that targets genes for post-transcriptional silencing through the RNA interference pathway.
+ PERSON: Matthew Brush
+ PERSON: Matthew Brush
+ RNAi function
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ record function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A record function is a function that registers or collects information in a particular format on a particular recording medium. For example on paper or a digital representation
+ record function
+
+
+
+
+
+
+
+
+
+ magnify function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A magnify function is a function to increase the size of a transmitted object image through the precise arrangement of energy diffraction elements along an imaging path.
+ magnify function
+
+
+
+
+
+
+
+
+
+ contain function
+
+ A syringe, a beaker
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A contain function is a function to constrain a material entities location in space
+ contain function
+
+
+
+
+
+
+
+
+
+ heat function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A heat function is a function that increases the internal kinetic energy of a material
+ heat function
+
+
+
+
+
+
+
+
+
+ material separation function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A material separation function is a function that increases the resolution between two or more material entities. The to distinction between the entities is usually based on some associated physical quality.
+ material separation function
+
+
+
+
+
+
+
+
+
+ excitation function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A excitation function is a function to inject energy by bombarding a material with energetic particles (e.g., photons) thereby imbuing internal material components such as electrons with additional energy. These internal, 'excited' particles may lead to the rupturing of covalent chemical bonds or may quickly relax back to there unexcited state with an exponential time course thereby locally emitting energy in the form of photons.
+ excitation function
+
+
+
+
+
+
+
+
+
+ freeze function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A freeze function is a function to decrease the internal kinetic energy of a material below the freezing point of that type of material.
+ freeze function
+
+
+
+
+
+
+
+
+
+ synthesizing function
+
+ A synthesizing function is a function to assemble new output materials from distinct input materials. The output materials typically consist of chemically distinct monomeric objects or object aggregate polymers.
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ synthesizing function
+
+
+
+
+
+
+
+
+
+ perturb function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A perturb function is a function that disrupts the normal function of a system induced through either internal or external means. External means of perturbation include: (1) displacement fields in the physical sense - e.g., temperature change, osmotic shock, pressure change; (2) application of small molecules such as drugs or toxins to perturb the function of specific pathways or application of surfactants to perturb the normal function of plasma membrane. Internal means of perturbation include: (1) manipulation of gene function via gene knockout or transcript knockdown via RNAi; (2) directed genetic mutation leading to minimal aa alterations that interfere with peptide function.
+ http://en.wikipedia.org/wiki/Perturbation_biology
+ perturb function
+
+
+
+
+
+
+
+
+
+ mechanical function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A mechanical function is a function that is realised via mechanical work (through an certain amount of energy transferred by some force).
+ http://en.wikipedia.org/wiki/Mechanical_work
+ mechanical function
+
+
+
+
+
+
+
+
+
+ transfer function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A transfer function is a function to displace a material from one location to another.
+ transfer function
+
+
+
+
+
+
+
+
+
+ cool function
+
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A cool function is a function to decrease the internal kinetic energy of a material below the initial kinetic energy of that type of material.
+ cool function
+
+
+
+
+
+
+
+
+
+ information processor function
+
+ Frank Gibson
+ An information processor function is a function that converts information from one form to another, by a lossless process or an extraction process.
+ data processor function
+ information processor function
+
+
+
+
+
+
+
+
+
+ signal conversion function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ transduction function
+ A signal conversion function is an information processor function which transforms a signal into another type of signal. For example an analog-to-digital_converter, Ac/Ac converter, a synapse converts electrical action potentials into an intermediate chemical signal. The post synapse converts it back into an electric one passed on to the axon.
+ signal conversion function
+
+
+
+
+
+
+
+
+
+ signal amplification function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ A signal amplification function is a signal conversion function to inject energy into an input signal so as to produce an output signal with increased differential magnitude while also seeking to minimize increases in the signal to noise ratio. For example, to produce a 0.1 KW output signal from a 1 mW RMS input signal.
+ signal amplification function
+
+
+
+
+
+
+
+
+
+ image acquisition function
+
+ Frank Gibson
+ An image acquisition function is a function to acquire an image of a material
+ image acquisition function
+
+
+
+
+
+
+
+
+
+ environment control function
+
+ Bill Bug
+ Daniel Schober
+ Frank Gibson
+ Melanie Courtot
+ An environmental control function is a function that regulates a contained environment within specified parameter ranges. For example the control of light exposure, humidity and temperature.
+ environment control function
+
+
+
+
+
+
+
+
+
+ measure function
+
+ A glucometer measures blood glucose concentration, the glucometer has a measure function.
+ PERSON: Daniel Schober
+ PERSON: Helen Parkinson
+ PERSON: Melanie Courtot
+ PERSON:Frank Gibson
+ Measure function is a function that is borne by a processed material and realized in a process in which information about some entity is expressed relative to some reference.
+ measure function
+
+
+
+
+
+
+
+
+
+ sterilization function
+
+ a function to remove viable organisms from an input material
+ sterilization function
+
+
+
+
+
+
+
+
+
+ reagent application function
+
+ reagent application function
+ An automatic tissue processor automatically applies antibodies and buffers to histological tissue preparations.
+ A function that is realized when a reagent is automatically added to some research material.
+ PERSON: Nicole Vasilevsky, Matthew Brush
+ PERSON: Nicole Vasilevsky, Matthew Brush
+
+
+
+
+
+
+
+
+
+ addition of molecular tracer function
+
+ addition of molecular tracer function
+ PERSON: Nicole Vasilevsky, Matthew Brush
+ A reagent application function that is realized when a molecular tracer, such as an antibody or probe is automatically transferred to a biological specimen.
+ PERSON: Nicole Vasilevsky, Matthew Brush
+ Immunohistochemical labeling of tissue sections by an autostainer staining system.
+
+
+
+
+
+
+
+
+
+ specimen fixation function
+
+ EAGLE-I
+ a function that allows specific identification of individual speciment from one another.
+ e.g the function of a bar code reader used to read slide bar codes
+ specimen fixation function
+
+
+
+
+
+
+
+
+
+ cell transfer function
+
+ A cell harvester has a cell transfer function.
+ EAGLE-I
+ cell transfer function
+ is a transfer function that displaces cells from one place to another
+
+
+
+
+
+
+
+
+
+ study design
+
+ A study design is a plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution.
+ study design
+
+
+
+
+
+
+
+
+ equipment
+ A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes.
+ A physical object provided for specific purpose, task or occupation.
+ server; Bruker Vector-33 FT-IR
+
+
+
+
+
+
+
+ phase 0 clinical trial
+
+ Phase 0 Clinical Trial
+ Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies.
+
+
+
+
+
+
+
+ phase 1 clinical trial
+
+ In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects
+ Phase 1 Clinical Trial
+
+
+
+
+
+
+
+ phase 2 clinical trial
+
+ In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety.
+ Phase 2 Clinical Trial
+
+
+
+
+
+
+
+ phase 3 clinical trial
+
+ In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
+
+ Phase 3 Clinical Trial
+
+
+
+
+
+
+
+ phase 4 clinical trial
+
+ In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use.
+ Phase 4 Clinical Trial
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/role.owl b/productMods/WEB-INF/filegraph/tbox/role.owl
new file mode 100644
index 00000000..32d3d09f
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/role.owl
@@ -0,0 +1,94 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ administrator role
+
+
+
+
+
+
+
+ leader role
+ A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization.
+ A leadership role
+
+
+
+
+
+
+
+ member role
+ A role of being a member in a Process or an Organization
+
+
+
+
+
+
+
+ researcher role
+
+ A role of conducting funded or unfunded research, sometimes linked to an Agreement.
+ Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be.
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/scires-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/scires-public-1.5.owl
deleted file mode 100644
index d961b3b1..00000000
--- a/productMods/WEB-INF/filegraph/tbox/scires-public-1.5.owl
+++ /dev/null
@@ -1,233 +0,0 @@
-
-
- Scientific Research
-
-
- A service that produces a physical object or data, such as a custom micro-array chip, a made to order antibody, or a behavioral dataset
- Production Service
-
- A service that produces a physical object or data.
-
-
- eagle-i: Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
-NOTE: For now we are not addressing whether this is a subclass of foaf:Agent
- Reagent
- Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
-
-
- Phase 1 Clinical Trial
- In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects
- Phase 1 Clinical Trial
-
-
-
-
-
- OBI: An organism is material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
-NOTE that we are not addressing for now the issue of whether a foaf:Person is a subclass of obi:Organism
- Organism
- An organism is a material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment.
-
-
- A clinical trial is a research study using human volunteers to answer questions about treatments for diseases and conditions. Clinical trials are conducted in phases. The trials at each phase have a different purpose and help scientists answer different questions.
-
-
-
- Clinical Trial
- A research study using human volunteers to answer specifc health-related questions.
-
-
- Biological Specimen
- eagle-i: Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, part of or derived an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype.
- An individual animal, part of or derived an animal, plant, part of a plant, or microorganism.
- A portion or quantity of a biological material for use in testing, examination, or study.
-
-
-
- In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
-
- Phase 3 Clinical Trial
- Phase 3 Clinical Trial
-
-
-
-
-
-
-
-
-
-
- Instrument
- An implement used to facilitate work, especially precision work.
- An implement used to facilitate work, especially precision work.
-
-
-
-
- A protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
- Protocol
- A plan specification that allows different domain experts to reliably and independently reproduce a process.
-
-
- Phase 0 Clinical Trial
-
- Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies.
- Phase 0 Clinical Trial
-
-
- Phase 4 Clinical Trial
- In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use.
- Phase 4 Clinical Trial
-
-
-
-
- A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service.
- A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provisi
- Access Service
-
-
- Research Project
- The comment in ero says "Maybe sameAs Investigation but is subject of funding"
-
- A project whose goal is the increase of knowledge, the primary aim being a greater knowledge or understanding of the subject under study.
-
-
- Human Study
- eagle-i: Research project that uses or collects measurements or assessments about humans.
- Research project that uses or collects measurements or assessments about humans.
-
-
-
- Phase 2 Clinical Trial
-
- Phase 2 Clinical Trial
- In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety.
-
-
- Storage Service
- A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.
- A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.
-
-
-
-
-
-
-
- provides access to
-
-
-
-
-
-
- has documentation
-
-
-
-
-
-
-
- realizes protocol
-
-
-
-
- documentation for
-
-
-
-
- access provided by
-
-
-
-
-
- protocol realized by
-
-
- Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected.
-
- Institutional Review Board (IRB) number
-
-
- number of human participants in the study (trial).
-
- study population count
-
-
-
- ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials
- NCT00000419
-
- National Clinical Trials (NCT) number
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/service.owl b/productMods/WEB-INF/filegraph/tbox/service.owl
new file mode 100644
index 00000000..9d88862d
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/service.owl
@@ -0,0 +1,14 @@
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/teaching.owl b/productMods/WEB-INF/filegraph/tbox/teaching.owl
new file mode 100644
index 00000000..26aa6b04
--- /dev/null
+++ b/productMods/WEB-INF/filegraph/tbox/teaching.owl
@@ -0,0 +1,76 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ course
+
+ A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
+ A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
+
+
+
+
+
+
+
+ teacher role
+ A role of serving as an educator
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-bibo-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-bibo-public-1.5.owl
deleted file mode 100644
index fb97b9d8..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-bibo-public-1.5.owl
+++ /dev/null
@@ -1,1585 +0,0 @@
-
-
-
- Bibontology
-
-
-
-
-
-
-
-
-
-
- review of
- The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used.
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- affirmedBy
- The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/ontology/bibo/
- A legal decision that affirms a ruling.
-
-
-
-
-
-
-
-
-
-
- annotates
- The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html.
- http://purl.org/ontology/bibo/
- stable
- Critical or explanatory note for a Document.
-
-
-
-
-
-
-
-
-
- cited by
-
-
-
-
-
-
-
-
-
- cites
-
-
-
-
-
-
-
-
-
-
- court
- Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property "unstable".
- http://purl.org/ontology/bibo/
- unstable
- A court associated with a legal document; for example, that which issues a decision.
-
-
-
-
-
-
-
-
-
- related degree
- The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term "unstable". The bibo editorial note is: "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."
- http://purl.org/ontology/bibo/
- The thesis degree.
- We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.
- unstable
-
-
-
-
-
-
-
-
- director
- Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
- http://purl.org/ontology/bibo/
- A Film director.
- stable
-
-
-
-
-
-
-
-
- interviewee
- http://purl.org/ontology/bibo/
- stable
- An agent that is interviewed by another agent.
-
-
-
-
-
-
-
-
- interviewer
- http://purl.org/ontology/bibo/
- stable
- An agent that interview another agent.
-
-
-
-
-
-
-
-
- performer
- http://purl.org/ontology/bibo/
- stable
-
-
-
-
-
-
-
-
-
- related documents
- Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product.
- http://purl.org/ontology/bibo/
- Relates an event to associated documents; for example, conference to a paper.
- unstable
-
-
-
-
-
-
-
-
-
- recipient
- http://purl.org/ontology/bibo/
- stable
- An agent that receives a communication document.
-
-
-
-
-
-
-
-
- reproduced in
-
-
-
-
-
-
-
-
-
-
- reversedBy
- The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/ontology/bibo/
- A legal decision that reverses a ruling.
-
-
-
-
-
-
-
-
-
-
- review of
- The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used.
-
-
-
-
-
-
-
-
-
- status
- paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this.
-
-
-
-
-
-
-
-
- subsequentLegalDecision
- Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/ontology/bibo/
- A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.).
-
-
-
-
-
-
-
-
-
- transcript of
- The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable.
- http://purl.org/ontology/bibo/
- Relates a document to some transcribed original.
- unstable
-
-
-
-
-
-
-
-
-
- translation of
- Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
- http://purl.org/ontology/bibo/
- Relates a translated document to the original document.
- stable
-
-
-
-
-
-
-
-
- translator
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- has translation
- Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- translator of
-
-
-
-
-
-
-
-
-
-
-
-
-
- abstract
- http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/dc/terms/
- A summary of the resource.
- stable
-
-
-
-
-
-
-
-
-
- asin
- 020530902X
- Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number.
- http://purl.org/ontology/bibo/
- Amazon Standard Identification Number
- stable
-
-
-
-
-
-
-
-
- chapter
- Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future
- http://purl.org/ontology/bibo/
- An chapter number
- unstable
-
-
-
-
-
-
-
-
-
- coden
- CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues.
-Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN
- http://purl.org/ontology/bibo/
- An identifier of serials, still in use by libraries, but replaced by ISSN for any new work
- stable
-
-
-
-
-
-
-
- Digital Object Identifier (DOI)
- http://purl.org/ontology/bibo/
- stable
- Digital Object Identifier
-
-
-
-
-
-
-
-
- EAN International-Uniform Code Council (EAN-UCC) 13
- Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council.
-The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US.
- http://purl.org/ontology/bibo/
- European Article Number/Uniform Commercier Code 13
- stable
-
-
-
-
-
-
-
-
- edition
- http://purl.org/ontology/bibo/
- The name defining a special edition of a document. Normally its a literal value composed of a version number and words.
- stable
-
-
-
-
-
-
-
-
- Electronic International Standard Serial Number (EISSN)
- eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN
- http://purl.org/ontology/bibo/
- stable
- The electronic ISSN number of a periodical.
-
-
-
-
-
-
-
-
- gtin14
- http://en.wikipedia.org/wiki/Global_Trade_Item_Number.
- http://purl.org/ontology/bibo/
- stable
- Global Trade Item Number 14
-
-
-
-
-
-
-
-
- identifier
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- International Standard Book Number (ISBN) 10
- http://en.wikipedia.org/wiki/Isbn.
-
-
-
-
-
-
-
-
-
-
- International Standard Book Number (ISBN) 13
- source: http://en.wikipedia.org/wiki/Isbn.
-
-
-
-
-
-
-
-
-
- International Standard Serial Number (ISSN)
- http://purl.org/ontology/bibo/
- source: http://en.wikipedia.org/wiki/Issn
- stable
- International Standard Serial Number
-
-
-
-
-
-
-
-
-
- issue
- Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number "4"
-
-
-
-
-
-
-
-
- Library of Congress Control Number (LCCN)
- Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number.
- http://purl.org/ontology/bibo/
- stable
- Library of Congress Control Number
-
-
-
-
-
-
-
-
- locator
- definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/ontology/bibo/
- stable
- A description (often numeric) that locates an item within a containing document or collection.
-
-
-
-
-
-
-
-
- number of pages
-
-
-
-
-
-
-
-
-
- number
- Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
-
-
-
-
-
-
-
-
- Online Computer Library Center (OCLC) number
- http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/.
-
-
-bibo has the domain of this property set to the union of Collection and Document.
- http://purl.org/ontology/bibo/
- stable
- OCLC Identifier
-
-
-
-
-
-
-
-
-
- end page
- http://purl.org/ontology/bibo/
- stable
- Ending page number within a continuous page range.
-
-
-
-
-
-
-
-
-
- start page
- http://purl.org/ontology/bibo/
- stable
- Starting page number within a continuous page range.
-
-
-
-
-
-
-
-
- PubMed Identifier
- The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind.
- http://purl.org/ontology/bibo/
- stable
- PubMed Identifier
-
-
-
-
-
-
-
-
-
-
- name prefix
- Mr; Ms; Mrs
- http://dictionary.reference.com/browse/prefix
- http://purl.org/ontology/bibo/
- stable
- The prefix of a name
-
-
-
-
-
-
-
-
- section
- http://purl.org/ontology/bibo/
- An section number
- Di Rado, Alicia. 1995. Trekking through college: Classes explore
-modern society using the world of Star trek. Los Angeles Times, March
-15, sec. A, p. 3.
- unstable
-
-
-
-
-
-
-
-
- short description
- http://purl.org/ontology/bibo/
- A short description of the resource.
- unstable
- The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry.
-
-
-
-
-
-
-
-
- sici
- A sub property of identifier (http://en.wikipedia.org/wiki/SICI).
- http://purl.org/ontology/bibo/
- Serial Item and Contribution Identifier
- stable
-
-
-
-
-
-
-
-
-
- name suffix
- Jr.; III;; M.D.
- http://purl.org/ontology/bibo/
- stable
- The suffix of a name
-
-
-
-
-
-
-
-
- upc
- http://purl.org/ontology/bibo/
- source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code.
- stable
- Universal Product Code
-
-
-
-
-
-
-
-
-
- URI
- Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
-
-
-
-
-
-
-
-
-
- volume
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- Academic Article
-
- A specific academic journal article
- Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography
- http://purl.org/ontology/bibo/
- A scholarly academic article, typically published in a journal.
- stable
-
-
-
-
-
-
-
- Article
-
- A specific journal article
- A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book
- Short Definition modified from the bibo ontology.
- http://purl.org/ontology/bibo/
- stable
- A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine.
-
-
-
-
-
-
-
- Audio Document
-
- Recorded audio in any format
- http://purl.org/ontology/bibo/
- phonograph record; tape; CD; DVD; DAT
- stable
- An audio document; aka record.
-
-
-
-
-
-
-
- Audio-Visual Document
-
- Audiovisual recording in any format
- film; video; Blu-ray
- http://purl.org/ontology/bibo/
- An audio-visual document; film, video, and so forth.
- stable
-
-
-
-
-
-
-
- Bill
-
- Draft legislation presented for discussion to a legal body
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- stable
- Draft legislation presented for discussion to a legal body.
-
-
-
-
-
-
-
- Book
-
- A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers
- Short Definition copied from bibo ontology
- http://purl.org/ontology/bibo/
- A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers.
- stable
-
-
-
-
-
-
-
- Book Section
-
- A section of a book
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- unstable
- A section of a book.
-
-
-
-
-
-
-
- Brief
-
- A document stating the facts and points of law of a client's case
- http://purl.org/ontology/bibo/
- unstable
- A written argument submitted to a court.
-
-
-
-
-
-
-
- Chapter
-
- A main division of a book
- http://purl.org/ontology/bibo/
- A chapter of a book.
- unstable
-
-
-
-
-
-
-
- Code
-
- A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies
- Code of Federal Regulations
- Short Definition from OCLC Input Standards, EntW
- http://purl.org/ontology/bibo/
- A collection of statutes.
- stable
-
-
-
-
-
-
-
- Collected Document
-
- Short Definition is the Medical Subject Heading (MeSH) definition
- Work consisting of collections of previously published works
- http://purl.org/ontology/bibo/
- stable
- A document that simultaneously contains other documents.
-
-
-
-
-
-
-
- Collection
- Collection of information resources that have a unified identity
- Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license.
- Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection
- http://purl.org/ontology/bibo/
- stable
- A collection of Documents or Collections
-
-
-
-
-
-
-
- Conference
-
- 2010 International Congress on Autoimmunity; American Libraries Association 2009
- A meeting for consultation or discussion.
- core:Seminar and bibo:Conference are very similar.
- http://purl.org/ontology/bibo/
- A meeting for consultation or discussion.
- stable
-
-
-
-
-
-
-
- Court Reporter
-
- Collection of legal cases
- Supreme Court Reporter
- http://purl.org/ontology/bibo/
- stable
- A collection of legal cases.
-
-
-
-
-
-
-
- Document
- A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information.
- stable
-
-
-
-
-
-
-
- Document Part
-
- A distinct part of a larger document or collected document
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- a distinct part of a larger document or collected document.
- unstable
-
-
-
-
-
-
-
- Edited Book
-
- An edited collection of stand-alone articles published as a book
- Best American Science Writing 2009
- http://purl.org/ontology/bibo/
- stable
- An edited book.
-
-
-
-
-
-
-
- Excerpt
-
- A passage selected from a larger work
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- stable
- A passage selected from a larger work.
-
-
-
-
-
-
-
- Film
-
- Audiovisual recording in film format
- http://purl.org/ontology/bibo/
- aka movie.
- stable
-
-
-
-
-
-
-
- Hearing
-
- An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
- Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
- http://purl.org/ontology/bibo/
- An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit.
- stable
-
-
-
-
-
-
-
- Image
-
-
-
- A visual representation such as a photograph or graph
- http://purl.org/ontology/bibo/
- photograph; diagram
- A document that presents visual or diagrammatic information.
- stable
-
-
-
-
-
-
-
- Interview
-
- A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee.
- http://purl.org/ontology/bibo/
- radio or newspaper interview
- A formalized discussion between two or more people.
- stable
-
-
-
-
-
-
-
- Issue
-
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- something that is printed or published and distributed, esp. a given number of a periodical
- something that is printed or published and distributed, esp. a given number of a periodical
- stable
-
-
-
-
-
-
-
- Journal
-
- Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science.
- Contains original scholarly research or review articles by experts in the field
- Journal of Information Science; IEEE Intelligent System; Scientometrics
- http://purl.org/ontology/bibo/
- stable
- A periodical of scholarly journal Articles.
-
-
-
-
-
-
-
- Legal Case Document
-
- Official court papers for a case
- http://purl.org/ontology/bibo/
- A document accompanying a legal case.
- unstable
-
-
-
-
-
-
-
- Decision
-
- The written determination of a case, motion or claim by a court or tribunal
- http://purl.org/ontology/bibo/
- unstable
- A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law.
-
-
-
-
-
-
-
- Legal Document
-
- a document that states some contractual relationship or grants some right
- http://purl.org/ontology/bibo/
- A legal document; for example, a court decision, a brief, and so forth.
- stable
-
-
-
-
-
-
-
- Legislation
-
- Enactments of legislative bodies, published in either statute or code form
- From OCLC Input Standards, EntW
- http://purl.org/ontology/bibo/
- A legal document proposing or enacting a law or a group of laws.
- unstable
-
-
-
-
-
-
-
- Letter
-
- A written or printed communication addressed to a person or organization and usually transmitted by mail
- A written or printed communication addressed to a person or organization and usually transmitted by mail
-
-
-
-
-
-
-
- Magazine
-
- Abstracts and bibliographies are usually not included in magazines.
- Contains articles of current events or general interest, geared to the reading public as being informative or recreational
- New Yorker
- http://purl.org/ontology/bibo/
- A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports.
- stable
-
-
-
-
-
-
-
- Manual
-
- A book of instructions or guide to a specific topic
- SDB User Manual
- http://purl.org/ontology/bibo/
- A small reference book, especially one giving instructions.
- unstable
-
-
-
-
-
-
-
- Manuscript
-
- Short Definition is the Medical Subject Heading (MeSH) definition
- Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies
- http://purl.org/ontology/bibo/
- An unpublished Document, which may also be submitted to a publisher for publication.
- stable
-
-
-
-
-
-
-
- Map
-
- A graphical depiction of geographic features, scientific discipline, scientific data analytical results
- The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps.
- http://purl.org/ontology/bibo/
- A graphical depiction of geographic features.
- unstable
-
-
-
-
-
-
-
- Newspaper
-
- Contains news articles, opinions, features, advertising, and is usually issued daily or weekly
- USA Today
- http://purl.org/ontology/bibo/
- stable
- A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising.
-
-
-
-
-
-
-
- Note
-
- Notes or annotations about a resource
- Short Definition from bibo ontology
- http://purl.org/ontology/bibo/
- stable
- Notes or annotations about a resource.
-
-
-
-
-
-
-
- Patent
-
- (from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years
- A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/)
- http://purl.org/ontology/bibo/
- stable
- A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years.
-
-
-
-
-
-
-
- Performance
-
- Something carried out, acted or rendered.
- http://purl.org/ontology/bibo/
- unstable
- A public performance.
-
-
-
-
-
-
-
- Periodical
-
- http://purl.org/ontology/bibo/
- stable
- A group of related documents issued at regular intervals.
-
-
-
-
-
-
-
- Personal Communication Document
-
- A personal communication manifested in some document.
- A personal communication manifested in some document.
-
-
-
-
-
-
-
- Proceedings
-
- A compilation of documents published from an event, such as a conference
- Short Definition copied from bibo ontology
- http://purl.org/ontology/bibo/
- unstable
- A compilation of documents published from an event, such as a conference.
-
-
-
-
-
-
-
- Quote
-
- An excerpted collection of words
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- An excerpted collection of words.
- stable
-
-
-
-
-
-
-
- Reference Source
-
- A document that presents authoritative reference information, such as a dictionary or encylopedia
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- unstable
- A document that presents authoritative reference information, such as a dictionary or encylopedia .
-
-
-
-
-
-
-
- Report
-
- A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.
- Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles.
- http://purl.org/ontology/bibo/
- stable
- A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc..
-
-
-
-
-
-
-
- Series
-
- A thematic collection of documents, usually books, issued at regular or irregular intervals
- Methods in Molecular Biology
- http://purl.org/ontology/bibo/
- A loose, thematic, collection of Documents, often Books.
- stable
-
-
-
-
-
-
-
- Slide
-
- A slide in a slideshow
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- A slide in a slideshow
- unstable
-
-
-
-
-
-
-
- Slideshow
-
- A presentation of a series of slides, usually presented in front of an audience with written text and images
- Short Definition from the bibo ontology
- http://purl.org/ontology/bibo/
- A presentation of a series of slides, usually presented in front of an audience with written text and images.
- stable
-
-
-
-
-
-
-
- Standard
-
- A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry
- Short Definition from OCLC Input Standards, EntW
- http://purl.org/ontology/bibo/
- A document describing a standard
- stable
-
-
-
-
-
-
-
- Statute
-
- A bill enacted into law
- Short Definition from bibo ontology
- http://purl.org/ontology/bibo/
- A bill enacted into law.
- stable
-
-
-
-
-
-
-
- Thesis
-
- Short Definition from OCLC Input Standards, EntW
- Works created to satisfy the requirements for an academic certification or degree; also called dissertation
- http://purl.org/ontology/bibo/
- A document created to summarize research findings associated with the completion of an academic degree.
- stable
-
-
-
-
-
-
-
- Webpage
-
- One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web
- http://purl.org/ontology/bibo/
- A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print.
- unstable
-
-
-
-
-
-
-
- Website
-
- A group of webpages available within a specific parent address or URL on the World Wide Web
- Facebook; VIVOweb.org; Flickr
- http://purl.org/ontology/bibo/
- A group of Webpages accessible on the Web.
- unstable
-
-
-
-
-
-
-
- Workshop
-
- Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc.
- http://purl.org/ontology/bibo/
- A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc.
- stable
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-c4o-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-c4o-public-1.5.owl
deleted file mode 100644
index d480440c..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-c4o-public-1.5.owl
+++ /dev/null
@@ -1,62 +0,0 @@
-
-
- Citation Counting and Context Characterization Ontology
-
-
- Bibliographic Information Source
- A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.
-
-
- Global Citation Count
- The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.
-
-
-
- has global citation frequency
- A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date.
-
-
- A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.
-
- has global count source
-
-
-
- An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.
-
-
- has global count value
-
-
- has global count date
-
-
- The date on which the global citation count of the cited entity was recorded from a named bibliographic information source.
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-core-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-core-public-1.5.owl
deleted file mode 100644
index 303b1026..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-core-public-1.5.owl
+++ /dev/null
@@ -1,2155 +0,0 @@
-
-
-
- VIVO core
-
-
-
-
-
-
-
- most specific type
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- part of
-
-
-
-
-
-
-
-
- has part
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- date filed
-
-
-
-
-
-
-
-
-
-
- date issued
-
-
-
-
-
-
-
-
-
- date/time interval
-
-
-
-
-
-
-
-
- date/time precision
-
-
-
-
-
-
-
-
- date/time value
-
-
-
-
-
-
-
-
- end
-
-
-
-
-
-
-
-
-
-
- expiration date
-
-
-
-
-
-
-
-
- features
- This is done through a restriction on the foaf:Person class.
-
-
-
-
-
-
-
- geographic focus
-
-
-
-
-
-
-
-
- geographic focus of
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- subcontracted through
-
-
-
-
-
-
-
-
-
- associated concept
-
-
-
-
-
-
-
- has geographic location
- Currently being used by a restriction on organization.
-
-
-
-
-
-
-
-
-
- has prerequisite
-
-
-
-
-
-
-
-
-
- published in
-
-
-
-
-
-
-
- successor organization
-
-
-
-
-
-
-
-
-
- offered by
-
-
-
-
-
-
-
-
- offers
-
-
-
-
-
-
-
- prerequisite for
-
-
-
-
-
-
-
-
-
-
- provides funding through
- For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources.
-
-
-
-
-
-
-
-
-
- publication venue for
-
-
-
-
-
-
-
-
- publisher
- Public Definition source (http://www.answers.com/topic/publisher).
-
-
-
-
-
-
-
-
- publisher of
- Public Definition source (http://www.answers.com/topic/publisher).
-
-
-
-
-
-
-
-
-
- start
-
-
-
-
-
-
-
-
-
-
- subcontracts grant
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- abbreviation
- A short form for an longer title or name.
- B.A.
-
-
-
-
-
-
-
- Published US Classification Class/Subclass (CCL) code
-
-
-
-
-
-
-
-
-
- credits
-
-
-
-
-
-
-
- date/time
-
-
-
-
-
-
-
-
-
- description
-
-
-
-
-
-
-
- eRA Commons id
-
-
-
-
-
-
-
-
-
- keywords
- conservation
-
-use one freetextKeyword assertion for each keyword or phrase.
- one keyword or phrase per freetextKeyword assertion
-
-
-
-
-
-
-
-
-
- direct costs
-
-
-
-
-
-
-
- International Classification (ICL) code
- The International classification(s) to which the published application has been assigned.
-
-
-
-
-
-
-
-
-
- identifier
-
-
-
-
-
-
-
- license number
-
-
-
-
-
-
-
-
-
- link URI
-
-
-
-
-
-
-
-
- local award id
- core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI
-
-
-
-
-
-
-
-
-
- major field of degree
- Information Science; Computer Science; Anthropology
-
-
-
-
-
-
-
- NIH Manuscript Submission System ID
-
-
-
-
-
-
-
-
-
- ORCID id
- We can't yet assume that we will only have a single ORCID id for a person.
-source: http://en.wikipedia.org/wiki/ORCID .
-
-
-We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible.
-
-
-
-
-
-
-
-
-
-
- outreach overview
- My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production.
- Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities
-
-
-
-
-
-
-
-
-
- overview
-
-
-
-
-
-
-
-
-
- patent number
- source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp .
-
-
-
-
-
-
-
-
-
-
- place of publication
-
-
-
-
-
-
-
- PubMed Central ID
- A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission.
-
-
-
-
-
-
-
-
-
- rank
- this number indicates a position in a list
-
-
-
-
-
-
-
-
-
- report identifier
-
-
-
-
-
-
-
-
-
-
- research overview
- Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities
-
-
-
-
-
-
-
-
- ISI researcher id
- RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile.
-Definition source: http://isiwebofknowledge.com/researcherid/
-
-
-
-
-
-
-
-
-
- Scopus id
- Home page for Scopus: http://www.scopus.com/home.url
-
-
-
-
-
-
-
-
-
-
- seating capacity
- 55
- definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity).
-
-
-
-
-
-
-
-
-
-
- sponsor award id
- Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public.
-
-
-See also core:localAwardId.
-
-
-
-
-
-
-
-
-
-
- supplemental information
-
-
-
-
-
-
-
-
- teaching overview
- Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the "teaches" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses
-
-
-
-
-
-
-
-
-
- total award amount
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- Service Provider Role
-
- An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession.
- Member of the International Conference on Complex Systems Organizing Committee
-
-
-
-
-
-
-
- Research Opportunity
- An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- Academic Department
-
- A distinct, usually specialized educational unit within an educational organization.
- Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts)
-
-
-
-
-
-
-
- Academic Term
-
- An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester.
-
-
-
-
-
-
-
- Academic Year
-
- An explicit individual period considered by an academic institution to be its primary academic cycle.
-
-
-
-
-
-
-
- Advising Relationship
-
- A dual relationship of one person being advised or mentored by another person, typically including start and end dates
-
-
-
-
-
-
-
- Association
-
- A formal organization of people or organizations around a subject or practice.
- Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA)
-
-
-
-
-
-
-
- Attendee Role
- A role of attending an Event or EventSeries
-
-
-
-
-
-
-
- Authorship
-
-
- Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers.
-This class allows for linking an author to a publication while indicating information about that author's authorship.
- Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication.
- Currently any abstract name is given to members of this class. This could change in the future.
-
-
-
-
-
-
-
- Award or Honor Receipt
- The award bestowed may be represented with the Award class.
- The bestowal of an award, honor, or distinction to a person or person's at a particular time.
-
-
-
-
-
-
-
- Blog
-
- Blog is short for weblog.
- Library of Congress Blog
- Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger
-
-
-
-
-
-
-
- Blog Posting
-
- A specific blog posting
- An online article or commentary appearing on a blog
-
-
-
-
-
-
-
- Building
-
- Building that provides a particular service or is used for a particular activity.
- Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address.
- Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium
-
-
-
-
-
-
-
- Campus
- Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar
- Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus).
- The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site.
-
-
-
-
-
-
-
- Case Study
-
- A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis.
- A qualitative descriptive research study of individuals or a group
-
-
-
-
-
-
-
- Catalog
-
- A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them
- NLM Catalog
- Short Definition is the Medical Subject Heading (MeSH) definition
-
-
-
-
-
-
-
- Center
-
- A place where a particular activity or service is concentrated.
- Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center
- Short Definition take from http://www.thefreedictionary.com/center.
-
-
-
-
-
-
-
- Certification
-
- An issued certificate
- see also core:Certificate
-
-
-
-
-
-
-
- Clinical Organization
-
- Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles
- In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations "are" clinical and some "are" research organizations and that the distinction is important enough to warrant the additional class and class assertions
-
-
-
-
-
-
-
- Clinical Role
-
- A role of observing or treating patients
-
-
-
-
-
-
-
- Co-Principal Investigator Role
-
- Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel.
-
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- College
-
- A primary academic unit within a University or a free-standing higher education organization without graduate degree programs.
- College of Arts & Sciences; Ivy Tech Community College
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- Committee
-
- A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration.
- Curriculum Steering Committee; PhD Advisory Committee
- There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important.
-
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- Company
-
- a legally-recognized business organization
- from Wikipedia: "A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a "legal person". The name company arose because, at least originally, it represented or was owned by more than one real or legal person."
-
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- Competition
-
- An occasion on which a winner is selected from among two or more contestants.
- Intel Talent Search; poetry contest
- Not the same as an award or distinction.
-
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- Conference Paper
-
- A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue
-
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- Conference Poster
-
- The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented
-
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- Conference Series
-
- An organized series of a meeting for consultation or discussion.
- For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar.
-
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- Consortium
-
- Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio
- Independent organizations formally working together toward a common goal, under an expressed agreement
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- Continent
-
- A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf.
- Short Definition take from http://en.wiktionary.org/wiki/continent.
- The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America
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- Contract
- An agreement involving specific deliverables and payment
-
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- Core Laboratory
-
- A lab providing services such as training, protocols, or access to instruments or software
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- Country
-
- Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America
- An area of land distinguished by its political autonomy. Politically independent territories.
- Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing.
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- County
-
- Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo
- Short Definition modified from the one found here: http://www.thefreedictionary.com/county.
- The largest administrative division of most states or provinces.
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- Course
-
- A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
- A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010
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- Database
-
- A structured file of information or a set of logically related data stored and retrieved using computer-based means
- PubMed
- Short Definition is the Medical Subject Heading (MeSH) definition
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- Dataset
- A named collection of data, usually containing only one type of data
- US Patent Data; US Job Data
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- Date/Time Interval
- a specific period or duration, defined by (optional) start and end date/times.
-
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- Date/Time Value
- A date and/or time
-
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- Department
-
- A distinct, usually ongoing and specialized unit within a large organization.
- Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division.
- Legal (department within a company); Use for any non-academic department
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- Division
-
- An area of corporate activity organized as an administrative or functional unit.
- Cardiovascular Medicine (division within medicine)
- Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department.
-
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- Editor Role
-
- An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
- An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series
-
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- Editorial Article
-
- An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces
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- Equipment
- A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes.
- A physical object provided for specific purpose, task or occupation.
- server; Bruker Vector-33 FT-IR
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- Event Series
- A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes.
- Only use if no specific subclasses of core:EventSeries desribe the activity.
- Two or more events that occur at different times and are connected to each other.
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- Exhibit
-
- The showing of an object or a collection of objects, in an organized manner.
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- Extension Unit
-
- A unit devoted primarily to extension activities, whether for outreach or research.
- Alachua County Extension Office
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- F1000 Link
-
- F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews.
-
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- Facility
- Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility.
- Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service.
- Use subclasses of core:Facility subclasses instead of this class if possible
-
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- Faculty Administrative Position
-
- An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic)
- Associate Dean
- That is a position held by an academic faculty member who works for administration.
-
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- Faculty Mentoring Relationship
-
- An advisory relationship in which one faculty member mentors another faculty member.
-
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- Faculty Position
-
- Academic position in a university or institution
- Professor, associate professor and assistant professor are common positions for academic faculty.
- Professor; Associate Professor; Assistant Professor
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- Foundation
-
- An institution financed by a donation or legacy to aid research, education, the arts, etc.
- Definition take from: http://dictionary.reference.com/browse/foundation.
- The Ford Foundation
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- Funding Organization
-
- A defined class of organizations that fund Grants.
- National Institute of Health (NIH)
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- Geographic Location
-
- A location having coordinates in geographic space.
- Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
- Use subclasses of core:Geographic Location subclasses instead of this class if possible.
-
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- Geographic Region
- A location having coordinates in geographic space.
- Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion.
- Use subclasses of core:Geographic Region subclasses instead of this class if possible.
-
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-
- Geopolitical Entity
-
- A geographical area which is associated with some sort of political structure.
- Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity.
- Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible.
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- Government Agency
-
- A government agency is a permanent or semi-permanent organization in the machinery of government that is responsible for the oversight and administration of specific functions.
- Definition take from: http://en.wikipedia.org/wiki/Government_agency.
- United States Library of Congress
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- Graduate Advising Relationship
-
- An advisory relationship in which a professor advises a graduate student.
-
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- Graduate Student
-
- A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree.
-
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-
- Grant
- An intramural or extramural award to support scholarly work, such as UF09179 (VIVO)
- Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity
- Short definition is from the Glossary of NIH Terms.
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- Hospital
-
- An institution that provides medical, surgical, or psychiatric care and treatment for the sick or the injured.
- Definition take from: http://dictionary.reference.com/browse/hospital.
- Shands at the University of Florida
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- Institute
-
- An Institute normally has a research focus but may also fulfill instructional or outreach roles.
- Institute for Fundamental Theory
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-
-
- Internship
- Typically a student or a recent graduate undergoing supervised practical training.
-
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- Investigator Role
-
- A role in an Agreement (for example, a grant) as a named investigator or key personnel.
-
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- Invited Talk
-
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- Issued Credential
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- Laboratory
-
- An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials
-
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-
- Leader Role
-
- A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization.
- A leadership role
-
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-
-
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-
-
- Librarian Position
-
- A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials
- It is the common position in libraries.
- Librarian; Library Systems Analyst; Music Bibliographer
-
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- Library
-
- A collection of any materials, for study and enjoyment, which has been systematically arranged.
- Marston Science Library
- Used information from this definition: http://dictionary.reference.com/browse/library.
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-
- Licensure
-
- A granted license, which gives a 'permission to practice.'
- A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License.
-
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-
- Location
- It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class.
- Top level of all location classes.
- Use subclasses of core:Location when classsifying items.
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-
- Medical Residency
- Residency is a stage of graduate medical training.
-
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- Meeting
-
- A gathering of people for a defined purpose, not necessarily public or announced
-
-
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-
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-
-
- Member Role
-
- A role of being a member in a Process or an Organization
-
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-
-
- Museum
-
- A building or place where works of art, scientific specimens, or other objects of permanent value are kept and displayed.
- Definition was take from here: http://dictionary.reference.com/browse/museum
- The Getty Museum
-
-
-
-
-
-
-
- News Release
-
- A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature.
-
-
-
-
-
-
-
- Newsletter
-
- The Ornithological Newsletter
- Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public
-
-
-
-
-
-
-
- Non-Academic Position
-
- A position classified as professional, staff, support, or any other non-academic role
- Accounting & Research Services Assistant; Director of Information Technology
- Staff, support, and other non-academic positions.
-
-
-
-
-
-
-
- Non-Faculty Academic Position
-
- A position involving academic work but without faculty status
- Researcher; Academic Extension Associate; Postdoctoral Associate
- Those positions are held by people who do academic work but do not have faculty positions in universities or institutes.
-
-
-
-
-
-
-
- Organizer Role
-
- A role of organizing
-
-
-
-
-
-
-
- Outreach Provider Role
-
- An outreach or community service role directed outside a person's primary profession and institution
- Communicating Astronomy to the Public
- The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here.
-
-
-
-
-
-
-
- Peer Reviewer Role
-
- A role of peer reviewing
- is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing.
-Contents
-[hide]
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-
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-
-
- Populated Place
-
- Either city or town - a thickly populated area having fixed boundaries and certain local powers of government.
-
-
-
-
-
-
-
- Position
- An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified.
- Director of Admissions and Placement; Associate University Librarian
- Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position.
-
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-
-
-
-
- Postdoc or Fellow Advising Relationship
-
- An advisory relationship in which the advisee is a Postdoc or Fellow.
-
-
-
-
-
-
-
- Postdoctoral Position
-
- A postdoctoral training appointment (job)
-
-
-
-
-
-
-
- Postdoctoral Training
- Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject.
-
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-
-
-
-
-
- Presentation
-
- Encompasses talk, speech, lecture, slide lecture, conference presentation
-
-
-
-
-
-
-
- Presenter Role
-
- A role of presenting information
- Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee?
-
-
-
-
-
-
-
- Primary Position
-
- A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position.
- A position designated as primary by the organization where it is held.
-
-
-
-
-
-
-
- Principal Investigator Role
-
- Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director.
-
-
-
-
-
-
-
- Private Company
-
- A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company.
- Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html
- Publix Super Markets; Ernst & Young; PricewaterhouseCoopers
-
-
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-
-
-
-
- Program
-
- A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820)
- An ongoing academic initiative not formalized with department or division status.
-
-
-
-
-
-
-
- Project
- An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
- An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim.
-
-
-
-
-
-
-
-
- Publisher
-
- A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc.
- Definition found here: http://dictionary.reference.com/browse/publisher
- Elsevier; Harper & Row; Indiana University Press
-
-
-
-
-
-
-
- Relationship
- a reified relationship
- functions as an n-ary predicate
-
-
-
-
-
-
-
- Research Organization
-
- Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles
-
-
-
-
-
-
-
- Research Proposal
-
- A proposal for a research grant that has been submitted but not approved; does not represent an existing activity
-
-
-
-
-
-
-
- Researcher Role
-
- A role of conducting funded or unfunded research, sometimes linked to an Agreement.
- Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be.
-
-
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-
-
-
-
- Review
-
- An article reviewing one or more other information resources (a book, one or more other articles, movies, etc)
-
-
-
-
-
-
-
- Reviewer Role
-
- A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
- A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper.
-
-
-
-
-
-
-
- Room
-
- 100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room)
- Enter room number of name.
- Room that provides a particular service or is used for a particular activity.
-
-
-
-
-
-
-
- School
-
- An institution for instruction in a particular skill or field.
- Definition take from here: http://dictionary.reference.com/browse/school.
- School of Architecture; School of Music
-
-
-
-
-
-
-
- Score
-
- Written musical composition for voice or instruments or both
-
-
-
-
-
-
-
- Screenplay
-
- Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions
-
-
-
-
-
-
-
- Seminar Series
-
- An organized series of a meeting for an exchange of ideas, typically put on by a department or center.
- Applied Microeconomics Seminars; Future of Rural New York Seminar Series
- For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar.
-
-
-
-
-
-
-
- Service Providing Lab
-
- A laboratory that provides services
- Ideally a defined class -- a Laboratory the provides some Service via the property
-
-
-
-
-
-
-
- Speech
-
- Text of a speech written in preparation for delivery of the speech.
-
-
-
-
-
-
-
- State Or Province
-
- Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario
- One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US.
- Source of the Short Definition: http://www.thefreedictionary.com/state.
-
-
-
-
-
-
-
- Student
-
- A person who is enrolled in an educational institution.
- Use only if no specific subclasses of core:Student describe the person.
-
-
-
-
-
-
-
- Student Organization
-
- A student organization is an organization, operated by students at a university, whose membership normally consists only of students.
- Dancin' Gators
- Definition take from here: http://en.wikipedia.org/wiki/Student_society
-
-
-
-
-
-
-
- Subnational Region
-
- Boroughs; townships; districts; the Midwest
- For example, the Midwest, northeast U.S.
- Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity.
- Smaller administrative division into which a country may be divided.
-
-
-
-
-
-
-
- Teacher Role
-
- A role of serving as an educator
-
-
-
-
-
-
-
- Team
-
- An informal organization brought together for the purposes of a project or event.
- VIVO Outreach Team; VIVO Ontology Team
-
-
-
-
-
-
-
- Translation
-
- The result of rendering a work from one language to another
-
-
-
-
-
-
-
- Transnational Region
-
- Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion.
- None as yet.
- Not sure how to access the "Editor's Comments". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities.
- sub-Saharan Africa, North America
-
-
-
-
-
-
-
- URLLink
- The full URL.
- Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it.
- http://info.slis.indiana.edu/~katy/
-
-
-
-
-
-
-
- Undergraduate Advising Relationship
-
- An advisory relationship in which a professor advises an undergraduate student.
-
-
-
-
-
-
-
- Undergraduate Student
-
- A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate.
-
-
-
-
-
-
-
- University
-
- An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education.
- Definition taken from: http://en.wikipedia.org/wiki/University
- University of Florida; Washington University in St. Louis
-
-
-
-
-
-
-
- Video
-
- Audiovisual recording in video format
-
-
-
-
-
-
-
- Working Paper
-
- A document created as a basis for discussion or a very early draft of a formal paper
-
-
-
-
-
-
-
- Workshop Series
-
- An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops.
- Use workshop for individual events.
-
-
-
-
-
-
-
-
-
-
-
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-dcelements-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-dcelements-public-1.5.owl
deleted file mode 100644
index 8f495252..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-dcelements-public-1.5.owl
+++ /dev/null
@@ -1,41 +0,0 @@
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diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-dcterms-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-dcterms-public-1.5.owl
deleted file mode 100644
index 22dfa0f0..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-dcterms-public-1.5.owl
+++ /dev/null
@@ -1,47 +0,0 @@
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diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-event-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-event-public-1.5.owl
deleted file mode 100644
index 5506ce2b..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-event-public-1.5.owl
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- Event Ontology
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- is agent in
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- Event
- Only use if no specific subclasses of event:Event are appropriate.
- Something that happens at a given place and time.
- This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series.
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-The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent."
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diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-fabio-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-fabio-public-1.5.owl
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--- a/productMods/WEB-INF/filegraph/tbox/vivo-fabio-public-1.5.owl
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-
-
- FRBR-aligned Bibiographic Ontology
-
-
- A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.
- Clinical Guideline
- A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.
-
-
-
- A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by
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- Comment
- A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program.
-
-has super-classes
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-
- A formal correction to an error introduced by the publisher into a previously published document.
- Erratum
- A formal correction to an error introduced by the publisher into a previously published document.
-
-
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-foaf-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-foaf-public-1.5.owl
deleted file mode 100644
index 8d856433..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-foaf-public-1.5.owl
+++ /dev/null
@@ -1,196 +0,0 @@
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- FOAF
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- Agent
- Agents are things that do stuff
- see: http://xmlns.com/foaf/spec/#term_Agent
- Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind.
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- Group
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- A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions).
- A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event.
-
-see: http://xmlns.com/foaf/spec/#term_Group
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- Organization
-
- A generic class encompassing several types of organizations.
- Only use if no specific subclasses of foaf:organization desribe the organization.
- This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available.
- Ued to describe an organization related to bibliographic items such as a publishing company, etc.
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- Person
-
- The most general classification of a person
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diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-pws-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-pws-public-1.5.owl
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index c1dfc4e8..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-pws-public-1.5.owl
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- provenance support
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diff --git a/productMods/WEB-INF/filegraph/tbox/vivo-skos-public-1.5.owl b/productMods/WEB-INF/filegraph/tbox/vivo-skos-public-1.5.owl
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index 107038a6..00000000
--- a/productMods/WEB-INF/filegraph/tbox/vivo-skos-public-1.5.owl
+++ /dev/null
@@ -1,54 +0,0 @@
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- SKOS (Simple Knowledge Organization System)
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- Concept
- An idea or notion; a unit of thought.
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- Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
- narrower term
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- related
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- broader term
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- Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
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-
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo.owl b/productMods/WEB-INF/filegraph/tbox/vivo.owl
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--- a/productMods/WEB-INF/filegraph/tbox/vivo.owl
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@@ -1,682 +0,0 @@
-
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- assigned by
- Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance.
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- assigns
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- related by
- Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent.
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- relates
- Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship.
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- has_monetary_amount
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- has_value
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- self governing
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- service
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- software
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- data
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- journal article (IAO)
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- information content entity (IAO)
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- scalar measurement datum
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- document (IAO)
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- global citation count
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- administrator role
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- advising process
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- attending process
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- awarded degree
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- The awarding of a degree by an agent to another agent. It is mostly for academic degrees.
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- editorship
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- A relationship that represents the recognition of an agent as an editor.
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- educational process
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- organizing process
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- presenting process
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- has_global_citation_frequency
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- geographic_location_of
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- geographical region
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- reviewed_in
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- geographically_within
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