1. Converted co-authorship to use the new vis arhitecture & freemarker.
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cdtank
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3 changed files with 298 additions and 16 deletions
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@ -1,2 +1,241 @@
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<#-- $This file is distributed under the terms of the license in /doc/license.txt$ -->
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<#assign visImageContextPath = "${urls.images}/visualization/" >
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<#assign loadingImageLink = "${visImageContextPath}ajax-loader.gif">
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<#assign egoVivoProfileURL = "${urls.base}/individual?uri=${egoURI}">
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<#assign egoSparklineDataURL = '${urls.base}${dataVisualizationURLRoot}?vis=person_pub_count&uri=${egoURI}&labelField=label'>
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<#assign coAuthorshipDownloadFile = '${urls.base}${dataVisualizationURLRoot}?vis=person_level&uri=${egoURI}&labelField=label'>
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<div id="body">
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<#--
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Support for this has ended. Only created for the VIVO Conf Demo.
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<style type="text/css">
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#profileImage img{
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width: 90px;
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height: auto;
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}
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#body h1 {
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margin:0.0em;
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}
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.sparkline_wrapper_table {
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display: inline;
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vertical-align: bottom;
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}
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.author_name {
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color: #13968c;
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font-weight: bold;
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}
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.neutral_author_name {
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color: black;
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font-weight: bold;
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}
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.author_moniker {
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color: #9C9C9C;
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}
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.sub_headings {
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color: #121b3c;
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padding-top: 10px;
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margin-bottom: 0.3em;
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}
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.sub_headings a {
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font-size:0.7em;
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font-weight:normal;
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}
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table.sparkline_wrapper_table td, th {
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vertical-align: bottom;
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}
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.inline_href {
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}
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#ego_profile {
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padding-left:10px;
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padding-top:10px;
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min-height: 100px;
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}
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#ego_label {
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font-size:1.1em;
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}
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#ego_profile_image {
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float:left;
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padding-right: 5px;
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}
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#ego_profile_image img{
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width: 90px;
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height: auto;
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}
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#ego_sparkline {
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cursor:pointer;
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height:36px;
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width:471px;
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}
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#coauthorships_table th {
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vertical-align: top;
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}
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</style>
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<!--[if IE]>
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<style type="text/css">
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#${egoPubSparklineContainerID},
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#${uniqueCoauthorsSparklineVisContainerID} {
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padding-bottom:15px;
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}
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#ego_label {
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margin-left:-3px;
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}
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</style>
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<![endif]-->
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<div id="ego_profile">
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<%-- Image --%>
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<div id="ego_profile_image" class="thumbnail"></div>
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<%-- Label --%>
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<a href="${egoVivoProfileURL}"><h1><span id="ego_label" class="author_name"></span></h1></a>
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<%-- Moniker--%>
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<span id="ego_moniker" class="author_moniker"></span>
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<div style="clear:both;"></div>
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<c:choose>
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<c:when test='${numOfAuthors > 0}'>
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<div id="incomplete-data">This information is based solely on publications which have been loaded into the VIVO system.
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This may only be a small sample of the person's total work. </div>
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<h2 class="sub_headings">Co-Author Network
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<c:choose>
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<c:when test="${numOfCoAuthorShips > 0 || numOfAuthors > 0}">
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<a href="${coAuthorshipDownloadFile}">(GraphML File)</a></h2>
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</c:when>
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<c:otherwise>
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</h2>
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<c:if test='${numOfAuthors > 0}'>
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<c:set var='authorsText' value='multi-author' />
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</c:if>
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<span id="no_coauthorships">Currently there are no ${authorsText} papers for
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<a href="${egoVivoProfileURL}"><span id="no_coauthorships_person" class="author_name">this author</span></a> in the VIVO database.</span>
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</c:otherwise>
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</c:choose>
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</c:when>
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<c:otherwise>
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<span id="no_coauthorships">Currently there are no papers for <a href="${egoVivoProfileURL}"><span id="no_coauthorships_person" class="author_name">
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this author</span></a> in the VIVO database.</span>
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</c:otherwise>
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</c:choose>
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</div>
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<c:if test='${numOfCoAuthorShips > 0 || numOfAuthors > 0}'>
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<div id="bodyPannel">
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<div id="visPanel" style="float: left; width: 600px;">
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<script language="JavaScript" type="text/javascript">
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<!--
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renderCoAuthorshipVisualization();
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//-->
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</script>
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</div>
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<div id="dataPanel">
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<br />
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<br />
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<div id="profileImage" class="thumbnail"></div>
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<div class="bold"><strong><span id="authorName" class="neutral_author_name"> </span></strong></div>
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<div class="italicize"><span id="profileMoniker" class="author_moniker"></span></div>
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<div><a href="#" id="profileUrl">VIVO profile</a> | <a href="#" id="coAuthorshipVisUrl">Co-author network</a></div>
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<br />
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<div class="author_stats" id="num_works"><span class="numbers" style="width: 40px;" id="works"></span> <span class="author_stats_text">Publication(s)</span></div>
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<div class="author_stats" id="num_authors"><span class="numbers" style="width: 40px;" id="coAuthors"></span> <span class="author_stats_text">Co-author(s)</span></div>
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<div class="author_stats" id="fPub" style="visibility:hidden"><span class="numbers" style="width:40px;" id="firstPublication"></span> <span>First Publication</span></div>
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<div class="author_stats" id="lPub" style="visibility:hidden"><span class="numbers" style="width:40px;" id="lastPublication"></span> <span>Last Publication</span></div>
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</div>
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</div>
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</c:if>
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<c:if test='${numOfCoAuthorShips > 0}'>
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<div class="vis_stats">
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<h2 class="sub_headings">Table</h2>
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<c:if test='${numOfCoAuthorShips > 0}'>
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<div class="vis-tables">
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<p id="coauth_table_container" class="datatable"></p>
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</div>
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</c:if>
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<div style="clear:both;"></div>
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</div>
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</c:if>
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</div>
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<script language="JavaScript" type="text/javascript">
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$(document).ready(function(){
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<c:if test='${numOfCoAuthorShips > 0}'>
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$("#coauth_table_container").empty().html('<img id="loadingData" with="auto" src="${loadingImageLink}" />');
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</c:if>
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processProfileInformation("ego_label",
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"ego_moniker",
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"ego_profile_image",
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jQuery.parseJSON(getWellFormedURLs("${requestScope.egoURIParam}", "profile_info")));
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<c:if test='${empty numOfCoAuthorShips || empty numOfAuthors}'>
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if ($('#ego_label').text().length > 0) {
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setProfileName('no_coauthorships_person', $('#ego_label').text());
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}
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</c:if>
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});
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</script>
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-->
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@ -1,17 +1,53 @@
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<#-- $This file is distributed under the terms of the license in /doc/license.txt$ -->
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<#assign visualizationURLRoot ="/visualization">
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<#assign standardVisualizationURLRoot ="/visualizationfm">
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<#assign ajaxVisualizationURLRoot ="/visualizationAjax">
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<#assign dataVisualizationURLRoot ="/visualizationData">
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<#assign egoURI ="${egoURIParam?url}">
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<#assign egoCoAuthorshipDataFeederURL = '${urls.base}${visualizationURLRoot}?vis=coauthorship&uri=${egoURI}&render_mode=data&labelField=label'>
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<#assign egoCoPIDataFeederURL = '${urls.base}${visualizationURLRoot}?vis=coprincipalinvestigator&uri=${egoURI}&render_mode=data&labelField=label'>
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<#assign egoCoAuthorsListDataFileURL = '${urls.base}${visualizationURLRoot}?vis=person_level&uri=${egoURI}&render_mode=data&vis_mode=coauthors'>
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<#assign egoCoAuthorshipDataFeederURL = '${urls.base}${dataVisualizationURLRoot}?vis=coauthorship&uri=${egoURI}&labelField=label'>
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<#assign egoCoPIDataFeederURL = '${urls.base}${dataVisualizationURLRoot}?vis=coprincipalinvestigator&uri=${egoURI}&labelField=label'>
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<#assign egoCoAuthorsListDataFileURL = '${urls.base}${dataVisualizationURLRoot}?vis=person_level&uri=${egoURI}&vis_mode=coauthors'>
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<#assign swfLink = '${urls.images}/visualization/coauthorship/EgoCentric.swf'>
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<#assign adobeFlashDetector = '${urls.base}/js/visualization/coauthorship/AC_OETags.js'>
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<#assign googleVisualizationAPI = 'http://www.google.com/jsapi?autoload=%7B%22modules%22%3A%5B%7B%22name%22%3A%22visualization%22%2C%22version%22%3A%221%22%2C%22packages%22%3A%5B%22areachart%22%2C%22imagesparkline%22%5D%7D%5D%7D'>
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<#assign coAuthorShipJavaScript = '${urls.base}/js/visualization/personlevel/person_level.js'>
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<c:url var="adobeFlashDetector" value="/js/visualization/coauthorship/AC_OETags.js" />
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<c:url var="googleVisualizationAPI" value="http://www.google.com/jsapi?autoload=%7B%22modules%22%3A%5B%7B%22name%22%3A%22visualization%22%2C%22version%22%3A%221%22%2C%22packages%22%3A%5B%22areachart%22%2C%22imagesparkline%22%5D%7D%5D%7D"/>
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<c:url var="coAuthorShipJavaScript" value="/js/visualization/personlevel/person_level.js" />
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<script type="text/javascript" src="${adobeFlashDetector}"></script>
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<script type="text/javascript" src="${jquery}"></script>
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<script type="text/javascript" src="${googleVisualizationAPI}"></script>
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<script language="JavaScript" type="text/javascript">
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<!--
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// -----------------------------------------------------------------------------
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// Globals
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// Major version of Flash required
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var requiredMajorVersion = 10;
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// Minor version of Flash required
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var requiredMinorVersion = 0;
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// Minor version of Flash required
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var requiredRevision = 0;
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// -----------------------------------------------------------------------------
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var swfLink = "${swfLink}";
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var egoURI = "${egoURI}";
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var egoCoAuthorshipDataFeederURL = "${egoCoAuthorshipDataFeederURL}";
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var egoCoAuthorsListDataFileURL = "${egoCoAuthorsListDataFileURL}";
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var egoCoPIDataFeederURL = "${egoCoPIDataFeederURL}";
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var domainParam = "${completeURL}";
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var visMode = "${visMode}";
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// -->
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</script>
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<script type="text/javascript" src="${coAuthorShipJavaScript}"></script>
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<c:url var="coAuthorStyle" value="/${themeDir}css/visualization/personlevel/coauthor_style.css" />
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<c:url var="pageStyle" value="/${themeDir}css/visualization/personlevel/page.css" />
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<c:url var="vizStyle" value="/${themeDir}css/visualization/visualization.css" />
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<link href="${coAuthorStyle}" rel="stylesheet" type="text/css" />
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<link href="${pageStyle}" rel="stylesheet" type="text/css" />
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<link rel="stylesheet" type="text/css" href="${vizStyle}" />
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@ -91,7 +91,11 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
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DataSource dataSource)
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throws MalformedQueryParametersException {
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String egoURI = vitroRequest.getParameter(
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/*
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* Support for this has ceased to exist. Standalone mode was created only for demo
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* purposes for VIVO Conf.
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* */
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/* String egoURI = vitroRequest.getParameter(
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VisualizationFrameworkConstants
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.INDIVIDUAL_URI_KEY);
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@ -104,11 +108,14 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
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return prepareStandaloneResponse(egoURI,
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authorNodesAndEdges,
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vitroRequest);
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vitroRequest);*/
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throw new UnsupportedOperationException("CoAuthorship does not provide Standalone Response.");
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}
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private String getCoauthorsPerYearCSVContent(Map<String, Set<Node>> yearToCoauthors) {
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StringBuilder csvFileContent = new StringBuilder();
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