From 4598aae5786cc6ca493af9328283ae142783d57b Mon Sep 17 00:00:00 2001 From: brianjlowe Date: Mon, 5 Aug 2013 16:46:25 -0400 Subject: [PATCH] work in progress on data migration and related changes for ISF properties --- productMods/WEB-INF/filegraph/tbox/bfo.owl | 7310 +++++++++++++++++ .../app/loadedAtStartup/PropertyConfig.n3 | 21 +- .../ontologies/update/askUpdated.sparql | 4 +- .../WEB-INF/ontologies/update/diff.tab.txt | 1 + .../geopolitical.tbox.ver1.1-11-18-11.owl | 1868 +++++ .../update/oldVersion/isDefinedBy-1.5.owl | 25 + .../update/oldVersion/scires-1.5.owl | 208 + .../update/oldVersion/vivo-bibo-1.5.owl | 1417 ++++ .../update/oldVersion/vivo-c4o-1.5.owl | 51 + .../update/oldVersion/vivo-core-1.5.owl | 3492 ++++++++ .../update/oldVersion/vivo-dcelements-1.5.owl | 24 + .../update/oldVersion/vivo-dcterms-1.5.owl | 47 + .../update/oldVersion/vivo-event-1.5.owl | 112 + .../update/oldVersion/vivo-fabio-1.5.owl | 43 + .../update/oldVersion/vivo-foaf-1.5.owl | 208 + .../update/oldVersion/vivo-pws-1.5.owl | 39 + .../update/oldVersion/vivo-skos-1.5.owl | 45 + .../WEB-INF/ontologies/update/success.n3 | 6 +- .../WEB-INF/resources/startup_listeners.txt | 2 +- .../listViewConfig-authorInAuthorship.xml | 26 +- 20 files changed, 14929 insertions(+), 20 deletions(-) create mode 100644 productMods/WEB-INF/filegraph/tbox/bfo.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/geopolitical.tbox.ver1.1-11-18-11.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/isDefinedBy-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/scires-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-bibo-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-c4o-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-core-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcelements-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcterms-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-event-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-fabio-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-foaf-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-pws-1.5.owl create mode 100644 productMods/WEB-INF/ontologies/update/oldVersion/vivo-skos-1.5.owl diff --git a/productMods/WEB-INF/filegraph/tbox/bfo.owl b/productMods/WEB-INF/filegraph/tbox/bfo.owl new file mode 100644 index 00000000..9524f80c --- /dev/null +++ b/productMods/WEB-INF/filegraph/tbox/bfo.owl @@ -0,0 +1,7310 @@ + + + + Alan Ruttenberg + Bill Duncan + Stefan Schulz + Melanie Courtot + BFO 2 Reference: BFO does not claim to be a complete coverage of all entities. It seeks only to provide coverage of those entities studied by empirical science together with those entities which affect or are involved in human activities such as data processing and planning – coverage that is sufficiently broad to provide assistance to those engaged in building domain ontologies for purposes of data annotation [17 + Mark Ressler + Fabian Neuhaus + Thomas Bittner + Bjoern Peters + Mauricio Almeida + David Osumi-Sutherland + BFO 2 Reference: For both terms and relational expressions in BFO, we distinguish between primitive and defined. ‘Entity’ is an example of one such primitive term. Primitive terms in a highest-level ontology such as BFO are terms that are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms. + Leonard Jacuzzo + Janna Hastings + Mathias Brochhausen + Randall Dipert + Larry Hunter + Robert Rovetto + Albert Goldfain + Chris Mungall + Barry Smith + Ludger Jansen + This is an early version of BFO version 2 and has not yet been extensively reviewed by the project team members. Please see the project site http://code.google.com/p/bfo/ , the bfo2 owl discussion group http://groups.google.com/group/bfo-owl-devel , the bfo2 discussion group http://groups.google.com/group/bfo-devel, the tracking google doc http://goo.gl/IlrEE, and the current version of the bfo2 reference http://purl.obolibrary.org/obo/bfo/dev/bfo2-reference.docx . This ontology is generated from a specification at http://bfo.googlecode.com/svn/trunk/src/ontology/owl-group/specification/ and with the code that generates the OWL version in http://bfo.googlecode.com/svn/trunk/src/tools/. A very early version of BFO version 2 in CLIF is at http://purl.obolibrary.org/obo/bfo/dev/bfo.clif + Werner Ceusters + Pierre Grenon + BFO 2 Reference: BFO’s treatment of continuants and occurrents – as also its treatment of regions, rests on a dichotomy between space and time, and on the view that there are two perspectives on reality – earlier called the ‘SNAP’ and ‘SPAN’ perspectives, both of which are essential to the non-reductionist representation of reality as we understand it from the best available science [30 + Jonathan Bona + Ron Rudnicki + + + + + + + + + + + + + + + + + + + + + + BFO OWL specification label + Really of interest to developers only + Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification. + + + + BFO CLIF specification label + Person:Alan Ruttenberg + Really of interest to developers only + Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2 + + + + + + has axiom label + + + + definition + + + + has associated axiom(nl) + + + + + editor note + + + + has associated axiom(fol) + + + + + imported from + + + + curator note + + + + definition source + + + + + term editor + + + + alternative term + + + + elucidation + + + + editor preferred term + + + + example of usage + + + + + + + + + + + + + + + + + + + inheres in at all times + BFO 2 Reference: Inherence is a subrelation of s-depends_on which holds between a dependent continuant and an independent continuant that is not a spatial region. Since dependent continuants cannot migrate from one independent continuant bearer to another, it follows that if b s-depends_on independent continuant c at some time, then b s-depends_on c at all times at which a exists. Inherence is in this sense redundantly time-indexed.For example, consider the particular instance of openness inhering in my mouth at t as I prepare to take a bite out of a donut, followed by a closedness at t+1 when I bite the donut and start chewing. The openness instance is then shortlived, and to say that it s-depends_on my mouth at all times at which this openness exists, means: at all times during this short life. Every time you make a fist, you make a new (instance of the universal) fist. (Every time your hand has the fist-shaped quality, there is created a new instance of the universal fist-shaped quality.) + inheresInAt + inheres-in_at + (iff (inheresInAt a b t) (and (DependentContinuant a) (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))) // axiom label in BFO2 CLIF: [051-002] + BFO2 Reference: independent continuant that is not a spatial region + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'inheres in at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'inheres in@en(x,y,t)'. + BFO2 Reference: specifically dependent continuant + b inheres_in c at t =Def. b is a dependent continuant & c is an independent continuant that is not a spatial region & b s-depends_on c at t. (axiom label in BFO2 Reference: [051-002]) + + + + + + + + + + + + + + + + b inheres_in c at t =Def. b is a dependent continuant & c is an independent continuant that is not a spatial region & b s-depends_on c at t. (axiom label in BFO2 Reference: [051-002]) + + + + + + + + + + + + + + + + + + + + + (iff (inheresInAt a b t) (and (DependentContinuant a) (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))) // axiom label in BFO2 CLIF: [051-002] + + + + + + + + + + + + + + + + + bearer of at some time + (iff (bearerOfAt a b t) (and (specificallyDependsOnAt b a t) (IndependentContinuant a) (not (SpatialRegion a)) (existsAt b t))) // axiom label in BFO2 CLIF: [053-004] + BFO2 Reference: independent continuant that is not a spatial region + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'bearer of at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'bearer of@en'(x,y,t) + BFO2 Reference: specifically dependent continuant + b bearer_of c at t =Def. c s-depends_on b at t & b is an independent continuant that is not a spatial region. (axiom label in BFO2 Reference: [053-004]) + bearerOfAt + bearer-of_st + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (bearerOfAt a b t) (and (specificallyDependsOnAt b a t) (IndependentContinuant a) (not (SpatialRegion a)) (existsAt b t))) // axiom label in BFO2 CLIF: [053-004] + + + + + + + + + + + + b bearer_of c at t =Def. c s-depends_on b at t & b is an independent continuant that is not a spatial region. (axiom label in BFO2 Reference: [053-004]) + + + + + + + + + + + realized in + (forall (x y z t) (if (and (RealizableEntity x) (Process y) (realizesAt y x t) (bearerOfAt z x t)) (hasParticipantAt y z t))) // axiom label in BFO2 CLIF: [106-002] + [copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003]) + if a realizable entity b is realized in a process p, then p stands in the has_participant relation to the bearer of b. (axiom label in BFO2 Reference: [106-002]) + realized-in + realizedIn + + + + + + (forall (x y z t) (if (and (RealizableEntity x) (Process y) (realizesAt y x t) (bearerOfAt z x t)) (hasParticipantAt y z t))) // axiom label in BFO2 CLIF: [106-002] + + + + + + if a realizable entity b is realized in a process p, then p stands in the has_participant relation to the bearer of b. (axiom label in BFO2 Reference: [106-002]) + + + + + + + + + + + + + + + + + + + + + + + realizes + (forall (x y t) (if (realizesAt x y t) (and (Process x) (or (Disposition y) (Role y)) (exists (z) (and (MaterialEntity z) (hasParticipantAt x z t) (bearerOfAt z y t)))))) // axiom label in BFO2 CLIF: [059-003] + realizes + realizes + to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003]) + + + + + + + + + + + + + + + + + + + to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003]) + + + + + + (forall (x y t) (if (realizesAt x y t) (and (Process x) (or (Disposition y) (Role y)) (exists (z) (and (MaterialEntity z) (hasParticipantAt x z t) (bearerOfAt z y t)))))) // axiom label in BFO2 CLIF: [059-003] + + + + + + + + + + + participates in at some time + [copied from inverse property 'has participant at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has participant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has participant@en'(x,y,t) + [copied from inverse property 'has participant at some time'] BFO2 Reference: process + [copied from inverse property 'has participant at some time'] BFO2 Reference: independent continuant that is not a spatial region, specifically dependent continuant, generically dependent continuant + participates-in_st + [copied from inverse property 'has participant at some time'] has_participant is an instance-level relation between a process, a continuant, and a temporal region at which the continuant participates in some way in the process. (axiom label in BFO2 Reference: [086-003]) + [copied from inverse property 'has participant at some time'] BFO 2 Reference: Spatial regions do not participate in processes. + participatesInAt + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + has participant at some time + (forall (x y t) (if (hasParticipantAt x y t) (Continuant y))) // axiom label in BFO2 CLIF: [088-001] + has-participant_st + hasParticipantAt + BFO2 Reference: process + (forall (x y t) (if (hasParticipantAt x y t) (Occurrent x))) // axiom label in BFO2 CLIF: [087-001] + (forall (x y t) (if (hasParticipantAt x y t) (existsAt y t))) // axiom label in BFO2 CLIF: [089-001] + (forall (x y t) (if (and (hasParticipantAt x y t) (GenericallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (genericallyDependsOn y z t) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [091-003] + (forall (x y t) (if (and (hasParticipantAt x y t) (SpecificallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t) (specificallyDependsOnAt y z t))))) // axiom label in BFO2 CLIF: [090-003] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has participant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has participant@en'(x,y,t) + BFO 2 Reference: Spatial regions do not participate in processes. + BFO2 Reference: independent continuant that is not a spatial region, specifically dependent continuant, generically dependent continuant + has_participant is an instance-level relation between a process, a continuant, and a temporal region at which the continuant participates in some way in the process. (axiom label in BFO2 Reference: [086-003]) + if b has_participant c at t & c is a generically dependent continuant, then there is some independent continuant that is not a spatial region d, and which is such that c g-depends on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [091-003]) + if b has_participant c at t & c is a specifically dependent continuant, then there is some independent continuant that is not a spatial region d, c s-depends_on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [090-003]) + if b has_participant c at t then b is an occurrent. (axiom label in BFO2 Reference: [087-001]) + if b has_participant c at t then c exists at t. (axiom label in BFO2 Reference: [089-001]) + if b has_participant c at t then c is a continuant. (axiom label in BFO2 Reference: [088-001]) + + + + + + + + + + + + + + + + + + + + + if b has_participant c at t & c is a specifically dependent continuant, then there is some independent continuant that is not a spatial region d, c s-depends_on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [090-003]) + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (Continuant y))) // axiom label in BFO2 CLIF: [088-001] + + + + + + + + + + + + if b has_participant c at t then c is a continuant. (axiom label in BFO2 Reference: [088-001]) + + + + + + if b has_participant c at t then b is an occurrent. (axiom label in BFO2 Reference: [087-001]) + + + + + + (forall (x y t) (if (and (hasParticipantAt x y t) (GenericallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (genericallyDependsOn y z t) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [091-003] + + + + + + if b has_participant c at t then c exists at t. (axiom label in BFO2 Reference: [089-001]) + + + + + + + + + + + + + + + has_participant is an instance-level relation between a process, a continuant, and a temporal region at which the continuant participates in some way in the process. (axiom label in BFO2 Reference: [086-003]) + + + + + + + + + + + + + + + + + + + + + if b has_participant c at t & c is a generically dependent continuant, then there is some independent continuant that is not a spatial region d, and which is such that c g-depends on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [091-003]) + + + + + + (forall (x y t) (if (and (hasParticipantAt x y t) (SpecificallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t) (specificallyDependsOnAt y z t))))) // axiom label in BFO2 CLIF: [090-003] + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (Occurrent x))) // axiom label in BFO2 CLIF: [087-001] + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (existsAt y t))) // axiom label in BFO2 CLIF: [089-001] + + + + + + + + + + + concretized by at some time + concretized-by_st + [copied from inverse property 'concretizes at some time'] you may concretize a poem as a pattern of memory traces in your head + [copied from inverse property 'concretizes at some time'] b concretizes c at t means: b is a specifically dependent continuant & c is a generically dependent continuant & for some independent continuant that is not a spatial region d, b s-depends_on d at t & c g-depends on d at t & if c migrates from bearer d to another bearer e than a copy of b will be created in e. (axiom label in BFO2 Reference: [075-002]) + [copied from inverse property 'concretizes at some time'] You may concretize a piece of software by installing it in your computer + [copied from inverse property 'concretizes at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'concretizes at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'concretizes@en'(x,y,t) + [copied from inverse property 'concretizes at some time'] You may concretize a recipe that you find in a cookbook by turning it into a plan which exists as a realizable dependent continuant in your head. + + + + + + + + + + + + + + + + + + + + + + + concretizes at some time + concretizesAt + (forall (x y t) (if (genericallyDependsOnAt x y t) (exists (z) (and (concretizesAt z x t) (specificallyDependsOnAt z y t))))) // axiom label in BFO2 CLIF: [076-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'concretizes at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'concretizes@en'(x,y,t) + (forall (x y t) (if (concretizesAt x y t) (and (SpecificallyDependentContinuant x) (GenericallyDependentContinuant y) (exists (z) (and (IndependentContinuant z) (specificallyDependsOnAt x z t) (genericallyDependsOnAt y z t)))))) // axiom label in BFO2 CLIF: [075-002] + concretizes_st + You may concretize a piece of software by installing it in your computer + You may concretize a recipe that you find in a cookbook by turning it into a plan which exists as a realizable dependent continuant in your head. + b concretizes c at t means: b is a specifically dependent continuant & c is a generically dependent continuant & for some independent continuant that is not a spatial region d, b s-depends_on d at t & c g-depends on d at t & if c migrates from bearer d to another bearer e than a copy of b will be created in e. (axiom label in BFO2 Reference: [075-002]) + if b g-depends on c at some time t, then there is some d, such that d concretizes b at t and d s-depends_on c at t. (axiom label in BFO2 Reference: [076-001]) + you may concretize a poem as a pattern of memory traces in your head + + + + + + + (forall (x y t) (if (concretizesAt x y t) (and (SpecificallyDependentContinuant x) (GenericallyDependentContinuant y) (exists (z) (and (IndependentContinuant z) (specificallyDependsOnAt x z t) (genericallyDependsOnAt y z t)))))) // axiom label in BFO2 CLIF: [075-002] + + + + + + if b g-depends on c at some time t, then there is some d, such that d concretizes b at t and d s-depends_on c at t. (axiom label in BFO2 Reference: [076-001]) + + + + + + b concretizes c at t means: b is a specifically dependent continuant & c is a generically dependent continuant & for some independent continuant that is not a spatial region d, b s-depends_on d at t & c g-depends on d at t & if c migrates from bearer d to another bearer e than a copy of b will be created in e. (axiom label in BFO2 Reference: [075-002]) + + + + + + (forall (x y t) (if (genericallyDependsOnAt x y t) (exists (z) (and (concretizesAt z x t) (specificallyDependsOnAt z y t))))) // axiom label in BFO2 CLIF: [076-001] + + + + + + + + + + + + + + + + + + + + + + + occurs in + occursIn + b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t [XXX-001 + occurs-in + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + contains process + contains-process + containsProcess + [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t [XXX-001 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + specifically depends on at all times + (forall (x y t) (if (and (Entity x) (or (continuantPartOfAt y x t) (continuantPartOfAt x y t) (occurrentPartOf x y) (occurrentPartOf y x))) (not (specificallyDependsOnAt x y t)))) // axiom label in BFO2 CLIF: [013-002] + (forall (x y z t) (if (and (specificallyDependsOnAt x y t) (specificallyDependsOnAt y z t)) (specificallyDependsOnAt x z t))) // axiom label in BFO2 CLIF: [054-002] + specificallyDependsOn + (forall (x y t) (if (and (Occurrent x) (IndependentContinuant y) (specificallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (specificallyDependsOnAt x y t_1))))) // axiom label in BFO2 CLIF: [015-002] + A pain s-depends_on the organism that is experiencing the pain + BFO2 Reference: specifically dependent continuant\; process; process boundary + s-depends-on_at + (forall (x) (if (exists (y t) (specificallyDependsOnAt x y t)) (not (MaterialEntity x)))) // axiom label in BFO2 CLIF: [052-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'specifically depends on at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'specifically depends on@en(x,y,t)'. + (forall (x y t) (if (specificallyDependsOnAt x y t) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [136-001] + BFO 2 Reference: An entity – for example an act of communication or a game of football – can s-depends_on more than one entity. Complex phenomena for example in the psychological and social realms (such as inferring, commanding and requesting) or in the realm of multi-organismal biological processes (such as infection and resistance), will involve multiple families of dependence relations, involving both continuants and occurrents [1, 4, 28 + BFO 2 Reference: S-dependence is just one type of dependence among many; it is what, in the literature, is referred to as ‘existential dependence’ [87, 46, 65, 20 + BFO 2 Reference: the relation of s-depends_on does not in every case require simultaneous existence of its relata. Note the difference between such cases and the cases of continuant universals defined historically: the act of answering depends existentially on the prior act of questioning; the human being who was baptized or who answered a question does not himself depend existentially on the prior act of baptism or answering. He would still exist even if these acts had never taken place. + If b is s-depends_on something at some time, then b is not a material entity. (axiom label in BFO2 Reference: [052-001]) + If b s-depends_on something at t, then there is some c, which is an independent continuant and not a spatial region, such that b s-depends_on c at t. (axiom label in BFO2 Reference: [136-001]) + If occurrent b s-depends_on some independent continuant c at t, then b s-depends_on c at every time at which b exists. (axiom label in BFO2 Reference: [015-002]) + To say that b s-depends_on a at t is to say that b and c do not share common parts & b is of its nature such that it cannot exist unless c exists & b is not a boundary of c and b is not a site of which c is the host [64 + a gait s-depends_on the walking object. (All at some specific time.) + a shape s-depends_on the shaped object + an entity does not s-depend_on any of its (continuant or occurrent) parts or on anything it is part of. (axiom label in BFO2 Reference: [013-002]) + if b s-depends_on c at t & c s-depends_on d at t then b s-depends_on d at t. (axiom label in BFO2 Reference: [054-002]) + one-sided s-dependence of a dependent continuant on an independent continuant: an instance of headache s-depends_on some head + one-sided s-dependence of a dependent continuant on an independent continuant: an instance of temperature s-depends_on some organism + one-sided s-dependence of a process on something: a process of cell death s-depends_on a cell + one-sided s-dependence of a process on something: an instance of seeing (a relational process) s-depends_on some organism and on some seen entity, which may be an occurrent or a continuant + one-sided s-dependence of one occurrent on another: a process of answering a question is dependent on a prior process of asking a question + one-sided s-dependence of one occurrent on another: a process of obeying a command is dependent on a prior process of issuing a command + one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of hitting a ball with a cricket bat + one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of paying cash to a merchant in exchange for a bag of figs + reciprocal s-dependence between occurrents: a process of buying and the associated process of selling + reciprocal s-dependence between occurrents: a process of increasing the volume of a portion of gas while temperature remains constant and the associated process of decreasing the pressure exerted by the gas + reciprocal s-dependence between occurrents: in a game of chess the process of playing with the white pieces is mutually dependent on the process of playing with the black pieces + the one-sided dependence of an occurrent on an independent continuant: football match on the players, the ground, the ball + the one-sided dependence of an occurrent on an independent continuant: handwave on a hand + the three-sided reciprocal s-dependence of the hue, saturation and brightness of a color [45 + the three-sided reciprocal s-dependence of the pitch, timbre and volume of a tone [45 + the two-sided reciprocal s-dependence of the roles of husband and wife [20 + + + + + an entity does not s-depend_on any of its (continuant or occurrent) parts or on anything it is part of. (axiom label in BFO2 Reference: [013-002]) + + + + + + (forall (x y t) (if (and (Entity x) (or (continuantPartOfAt y x t) (continuantPartOfAt x y t) (occurrentPartOf x y) (occurrentPartOf y x))) (not (specificallyDependsOnAt x y t)))) // axiom label in BFO2 CLIF: [013-002] + + + + + + (forall (x y z t) (if (and (specificallyDependsOnAt x y t) (specificallyDependsOnAt y z t)) (specificallyDependsOnAt x z t))) // axiom label in BFO2 CLIF: [054-002] + + + + + + If b s-depends_on something at t, then there is some c, which is an independent continuant and not a spatial region, such that b s-depends_on c at t. (axiom label in BFO2 Reference: [136-001]) + + + + + + (forall (x y t) (if (and (Occurrent x) (IndependentContinuant y) (specificallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (specificallyDependsOnAt x y t_1))))) // axiom label in BFO2 CLIF: [015-002] + + + + + + (forall (x) (if (exists (y t) (specificallyDependsOnAt x y t)) (not (MaterialEntity x)))) // axiom label in BFO2 CLIF: [052-001] + + + + + + if b s-depends_on c at t & c s-depends_on d at t then b s-depends_on d at t. (axiom label in BFO2 Reference: [054-002]) + + + + + + (forall (x y t) (if (specificallyDependsOnAt x y t) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [136-001] + + + + + + If occurrent b s-depends_on some independent continuant c at t, then b s-depends_on c at every time at which b exists. (axiom label in BFO2 Reference: [015-002]) + + + + + + If b is s-depends_on something at some time, then b is not a material entity. (axiom label in BFO2 Reference: [052-001]) + + + + + + + + + + + function of at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'function of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'function of@en(x,y,t)'. + f-of_at + (iff (functionOf a b t) (and (Function a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [067-001] + functionOfAt + a function_of b at t =Def. a is a function and a inheres_in b at t. (axiom label in BFO2 Reference: [067-001]) + + + + + + (iff (functionOf a b t) (and (Function a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [067-001] + + + + + + + + + + + + a function_of b at t =Def. a is a function and a inheres_in b at t. (axiom label in BFO2 Reference: [067-001]) + + + + + + + + + + + quality of at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'quality of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'quality of@en(x,y,t)'. + b quality_of c at t = Def. b is a quality & c is an independent continuant that is not a spatial region & b s-depends_on c at t. (axiom label in BFO2 Reference: [056-002]) + q-of_at + (iff (qualityOfAt a b t) (and (Quality a) (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))) // axiom label in BFO2 CLIF: [056-002] + qualityOfAt + + + + + + b quality_of c at t = Def. b is a quality & c is an independent continuant that is not a spatial region & b s-depends_on c at t. (axiom label in BFO2 Reference: [056-002]) + + + + + + (iff (qualityOfAt a b t) (and (Quality a) (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))) // axiom label in BFO2 CLIF: [056-002] + + + + + + + + + + + + + + + + + role of at all times + roleOfAt + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'role of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'role of@en(x,y,t)'. + (iff (roleOfAt a b t) (and (Role a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [065-001] + a role_of b at t =Def. a is a role and a inheres_in b at t. (axiom label in BFO2 Reference: [065-001]) + r-of_at + + + + + + + + + + + + a role_of b at t =Def. a is a role and a inheres_in b at t. (axiom label in BFO2 Reference: [065-001]) + + + + + + (iff (roleOfAt a b t) (and (Role a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [065-001] + + + + + + + + + + + + located in at all times + located-in_at + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (locatedInAt x y t) (continuantPartOfAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [049-001] + locatedInAt + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'located in at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'located in@en(x,y,t)'. + (iff (locatedInAt a b t) (and (IndependentContinuant a) (IndependentContinuant b) (exists (r_1 r_2) (and (occupiesSpatialRegionAt a r_1 t) (occupiesSpatialRegionAt b r_2 t) (continuantPartOfAt r_1 r_2 t))))) // axiom label in BFO2 CLIF: [045-001] + BFO2 Reference: independent continuant + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (continuantPartOfAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [048-001] + (forall (x y z t) (if (and (locatedInAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [046-001] + Located_in is transitive. (axiom label in BFO2 Reference: [046-001]) + Mary located_in Salzburg + b located_in c at t = Def. b and c are independent continuants, and the region at which b is located at t is a (proper or improper) continuant_part_of the region at which c is located at t. (axiom label in BFO2 Reference: [045-001]) + for all independent continuants b, c, and d: if b continuant_part_of c at t & c located_in d at t, then b located_in d at t. (axiom label in BFO2 Reference: [048-001]) + for all independent continuants b, c, and d: if b located_in c at t & c continuant_part_of d at t, then b located_in d at t. (axiom label in BFO2 Reference: [049-001]) + the Empire State Building located_in New York. + this portion of cocaine located_in this portion of blood + this stem cell located_in this portion of bone marrow + your arm located_in your body + + + + + for all independent continuants b, c, and d: if b located_in c at t & c continuant_part_of d at t, then b located_in d at t. (axiom label in BFO2 Reference: [049-001]) + + + + + + (forall (x y z t) (if (and (locatedInAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [046-001] + + + + + + b located_in c at t = Def. b and c are independent continuants, and the region at which b is located at t is a (proper or improper) continuant_part_of the region at which c is located at t. (axiom label in BFO2 Reference: [045-001]) + + + + + + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (locatedInAt x y t) (continuantPartOfAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [049-001] + + + + + + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (continuantPartOfAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [048-001] + + + + + + (iff (locatedInAt a b t) (and (IndependentContinuant a) (IndependentContinuant b) (exists (r_1 r_2) (and (occupiesSpatialRegionAt a r_1 t) (occupiesSpatialRegionAt b r_2 t) (continuantPartOfAt r_1 r_2 t))))) // axiom label in BFO2 CLIF: [045-001] + + + + + + for all independent continuants b, c, and d: if b continuant_part_of c at t & c located_in d at t, then b located_in d at t. (axiom label in BFO2 Reference: [048-001]) + + + + + + Located_in is transitive. (axiom label in BFO2 Reference: [046-001]) + + + + + + + + + + + occupies spatial region at some time + occupiesSpatialRegionAt + (forall (r t) (if (Region r) (occupiesSpatialRegionAt r r t))) // axiom label in BFO2 CLIF: [042-002] + BFO2 Reference: spatial region + located-at-r_st + (forall (x y r_1 t) (if (and (occupiesSpatialRegionAt x r_1 t) (continuantPartOfAt y x t)) (exists (r_2) (and (continuantPartOfAt r_2 r_1 t) (occupiesSpatialRegionAt y r_2 t))))) // axiom label in BFO2 CLIF: [043-001] + (forall (x r t) (if (occupiesSpatialRegionAt x r t) (and (SpatialRegion r) (IndependentContinuant x)))) // axiom label in BFO2 CLIF: [041-002] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'occupies spatial region at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'occupies spatial region@en'(x,y,t) + BFO2 Reference: independent continuant + b occupies_spatial_region r at t means that r is a spatial region in which independent continuant b is exactly located (axiom label in BFO2 Reference: [041-002]) + every region r is occupies_spatial_region r at all times. (axiom label in BFO2 Reference: [042-002]) + if b occupies_spatial_region r at t & b continuant_part_of b at t, then there is some r which is continuant_part_of r at t such that b occupies_spatial_region r at t. (axiom label in BFO2 Reference: [043-001]) + + + + + + + (forall (x y r_1 t) (if (and (occupiesSpatialRegionAt x r_1 t) (continuantPartOfAt y x t)) (exists (r_2) (and (continuantPartOfAt r_2 r_1 t) (occupiesSpatialRegionAt y r_2 t))))) // axiom label in BFO2 CLIF: [043-001] + + + + + + (forall (r t) (if (Region r) (occupiesSpatialRegionAt r r t))) // axiom label in BFO2 CLIF: [042-002] + + + + + + + + + + + + b occupies_spatial_region r at t means that r is a spatial region in which independent continuant b is exactly located (axiom label in BFO2 Reference: [041-002]) + + + + + + if b occupies_spatial_region r at t & b continuant_part_of b at t, then there is some r which is continuant_part_of r at t such that b occupies_spatial_region r at t. (axiom label in BFO2 Reference: [043-001]) + + + + + + + + + + + + every region r is occupies_spatial_region r at all times. (axiom label in BFO2 Reference: [042-002]) + + + + + + (forall (x r t) (if (occupiesSpatialRegionAt x r t) (and (SpatialRegion r) (IndependentContinuant x)))) // axiom label in BFO2 CLIF: [041-002] + + + + + + + + + + + generically depends on at some time + genericallyDependsOn + g-depends-on_st + BFO2 Reference: generically dependent continuant + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'generically depends on at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'generically depends on@en'(x,y,t) + (forall (x y) (if (exists (t) (genericallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (exists (z) (genericallyDependsOnAt x z t_1)))))) // axiom label in BFO2 CLIF: [073-001] + BFO2 Reference: independent continuant + b g-depends on c at t1 means: b exists at t1 and c exists at t1 & for some type B it holds that (c instantiates B at t1) & necessarily, for all t (if b exists at t then some instance_of B exists at t) & not (b s-depends_on c at t1). (axiom label in BFO2 Reference: [072-002]) + if b g-depends_on c at some time t, then b g-depends_on something at all times at which b exists. (axiom label in BFO2 Reference: [073-001]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (forall (x y) (if (exists (t) (genericallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (exists (z) (genericallyDependsOnAt x z t_1)))))) // axiom label in BFO2 CLIF: [073-001] + + + + + + b g-depends on c at t1 means: b exists at t1 and c exists at t1 & for some type B it holds that (c instantiates B at t1) & necessarily, for all t (if b exists at t then some instance_of B exists at t) & not (b s-depends_on c at t1). (axiom label in BFO2 Reference: [072-002]) + + + + + + if b g-depends_on c at some time t, then b g-depends_on something at all times at which b exists. (axiom label in BFO2 Reference: [073-001]) + + + + + + + + + + + has function at some time + hasFunctionAt + (iff (hasFunctionAt a b t) (functionOf b a t)) // axiom label in BFO2 CLIF: [070-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has function at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has function@en'(x,y,t) + a has_function b at t =Def. b function_of a at t. (axiom label in BFO2 Reference: [070-001]) + has-f_st + + + + + + (iff (hasFunctionAt a b t) (functionOf b a t)) // axiom label in BFO2 CLIF: [070-001] + + + + + + + + + + + + a has_function b at t =Def. b function_of a at t. (axiom label in BFO2 Reference: [070-001]) + + + + + + + + + + + has quality at some time + has-q_st + + + + + + + + + + + + + + + + + has role at some time + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has role at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has role@en'(x,y,t) + a has_role b at t =Def. b role_of a at t. (axiom label in BFO2 Reference: [068-001]) + hasRoleAt + (iff (hasRoleAt a b t) (roleOfAt b a t)) // axiom label in BFO2 CLIF: [068-001] + has-r_st + + + + + + + + + + + + a has_role b at t =Def. b role_of a at t. (axiom label in BFO2 Reference: [068-001]) + + + + + + (iff (hasRoleAt a b t) (roleOfAt b a t)) // axiom label in BFO2 CLIF: [068-001] + + + + + + + + + + + has generic dependent at some time + [copied from inverse property 'generically depends on at some time'] BFO2 Reference: independent continuant + has-g-dep_st + [copied from inverse property 'generically depends on at some time'] b g-depends on c at t1 means: b exists at t1 and c exists at t1 & for some type B it holds that (c instantiates B at t1) & necessarily, for all t (if b exists at t then some instance_of B exists at t) & not (b s-depends_on c at t1). (axiom label in BFO2 Reference: [072-002]) + [copied from inverse property 'generically depends on at some time'] BFO2 Reference: generically dependent continuant + [copied from inverse property 'generically depends on at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'generically depends on at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'generically depends on@en'(x,y,t) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + disposition of at all times + (iff (dispositionOf a b t) (and (Disposition a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [066-001] + dispositionOfAt + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'disposition of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'disposition of@en(x,y,t)'. + a disposition_of b at t =Def. a is a disposition and a inheres_in b at t. (axiom label in BFO2 Reference: [066-001]) + d-of_at + + + + + + (iff (dispositionOf a b t) (and (Disposition a) (inheresInAt a b t))) // axiom label in BFO2 CLIF: [066-001] + + + + + + + + + + + + a disposition_of b at t =Def. a is a disposition and a inheres_in b at t. (axiom label in BFO2 Reference: [066-001]) + + + + + + + + + + + exists at + exists-at + existsAt + BFO2 Reference: entity + BFO2 Reference: temporal region + b exists_at t means: b is an entity which exists at some temporal region t. (axiom label in BFO2 Reference: [118-002]) + + + + + + + + + + + + + b exists_at t means: b is an entity which exists at some temporal region t. (axiom label in BFO2 Reference: [118-002]) + + + + + + + + + + + + + + + + + + has continuant part at all times + hasContinuantPartAt + (iff (hasContinuantPartAt a b t) (continuantPartOfAt b a t)) // axiom label in BFO2 CLIF: [006-001] + b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + c-has-part_at + [copied from inverse property 'part of continuant at all times that whole exists'] forall(t) exists_at(y,t) -> exists_at(x,t) and 'part of continuant'(x,y,t) + [copied from inverse property 'part of continuant at all times that whole exists'] This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'has continuant part at all times' + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has continuant part at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has continuant part@en(x,y,t)'. + + + + + + + + + + + b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + + + + + + (iff (hasContinuantPartAt a b t) (continuantPartOfAt b a t)) // axiom label in BFO2 CLIF: [006-001] + + + + + + + + + + + + has proper continuant part at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has proper continuant part at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has proper continuant part@en(x,y,t)'. + hasProperContinuantPartAt + c-has-ppart_at + b has_proper_continuant_part c at t = Def. c proper_continuant_part_of b at t. [XXX-001 + + + + + + + + + + + has disposition at some time + has-d_st + hasDispositionAt + (iff (hasDispositionAt a b t) (dispositionOf b a t)) // axiom label in BFO2 CLIF: [069-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has disposition at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has disposition@en'(x,y,t) + a has_disposition b at t =Def. b disposition_of a at t. (axiom label in BFO2 Reference: [069-001]) + + + + + + (iff (hasDispositionAt a b t) (dispositionOf b a t)) // axiom label in BFO2 CLIF: [069-001] + + + + + + a has_disposition b at t =Def. b disposition_of a at t. (axiom label in BFO2 Reference: [069-001]) + + + + + + + + + + + + + + + + + has material basis at all times + has-material-basis_at + hasMaterialBasisAt + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has material basis at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has material basis@en(x,y,t)'. + (forall (x y t) (if (hasMaterialBasisAt x y t) (and (Disposition x) (MaterialEntity y) (exists (z) (and (bearerOfAt z x t) (continuantPartOfAt y z t) (exists (w) (and (Disposition w) (if (hasDisposition z w) (continuantPartOfAt y z t))))))))) // axiom label in BFO2 CLIF: [071-002] + b has_material_basis c at t means: b is a disposition & c is a material entity & there is some d bearer_of b at t& c continuant_part_of d at t& d has_disposition b at t because c continuant_part_of d at t. (axiom label in BFO2 Reference: [071-002]) + the material basis of John’s disposition to cough is the viral infection in John’s upper respiratory tract + the material basis of the disposition to wear unevenly of John’s tires is the worn suspension of his car. + + + + + + + + + + + + b has_material_basis c at t means: b is a disposition & c is a material entity & there is some d bearer_of b at t& c continuant_part_of d at t& d has_disposition b at t because c continuant_part_of d at t. (axiom label in BFO2 Reference: [071-002]) + + + + + + (forall (x y t) (if (hasMaterialBasisAt x y t) (and (Disposition x) (MaterialEntity y) (exists (z) (and (bearerOfAt z x t) (continuantPartOfAt y z t) (exists (w) (and (Disposition w) (if (hasDisposition z w) (continuantPartOfAt y z t))))))))) // axiom label in BFO2 CLIF: [071-002] + + + + + + + + + + + + + + + + + has member part at some time + [copied from inverse property 'member part of at some time'] BFO2 Reference: object + [copied from inverse property 'member part of at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'member part of at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'member part of@en'(x,y,t) + [copied from inverse property 'member part of at some time'] each piece in a chess set is a member part of the chess set; each Beatle in the collection called The Beatles is a member part of The Beatles. + [copied from inverse property 'member part of at some time'] each tree in a forest is a member_part of the forest + has-member-part_st + [copied from inverse property 'member part of at some time'] b member_part_of c at t =Def. b is an object & there is at t a mutually exhaustive and pairwise disjoint partition of c into objects x1, …, xn (for some n &gt; 1) with b = xi for some 1 ≤ i ≤ n. (axiom label in BFO2 Reference: [026-004]) + [copied from inverse property 'member part of at some time'] BFO2 Reference: object aggregate + + + + + + + + + + + + + + + + + + + + + + + + + has occurrent part + [copied from inverse property 'part of occurrent'] Mary’s 5th birthday occurrent_part_of Mary’s life + [copied from inverse property 'part of occurrent'] the first set of the tennis match occurrent_part_of the tennis match. + [copied from inverse property 'part of occurrent'] BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + (iff (hasOccurrentPart a b) (occurrentPartOf b a)) // axiom label in BFO2 CLIF: [007-001] + [copied from inverse property 'part of occurrent'] BFO2 Reference: occurrent + o-has-part + hasOccurrentPart + [copied from inverse property 'part of occurrent'] b occurrent_part_of c =Def. b is a part of c & b and c are occurrents. (axiom label in BFO2 Reference: [003-002]) + [copied from inverse property 'part of occurrent'] The process of a footballer’s heart beating once is an occurrent part but not a temporal_part of a game of football. + b has_occurrent_part c = Def. c occurrent_part_of b. (axiom label in BFO2 Reference: [007-001]) + + + + + + (iff (hasOccurrentPart a b) (occurrentPartOf b a)) // axiom label in BFO2 CLIF: [007-001] + + + + + + + + + + + + b has_occurrent_part c = Def. c occurrent_part_of b. (axiom label in BFO2 Reference: [007-001]) + + + + + + + + + + + + + + + + + + + + + + + + has proper occurrent part + [copied from inverse property 'proper part of occurrent'] b proper_occurrent_part_of c =Def. b occurrent_part_of c & b and c are not identical. (axiom label in BFO2 Reference: [005-001]) + hasProperOccurrentPart + o-has-ppart + b has_proper_occurrent_part c = Def. c proper_occurrent_part_of b. [XXX-001 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + has profile + has-profile + + + + + + + + + + + + + + + + + + + + + + + + has temporal part + [copied from inverse property 'temporal part of'] the 4th year of your life is a temporal part of your life\. The first quarter of a game of football is a temporal part of the whole game\. The process of your heart beating from 4pm to 5pm today is a temporal part of the entire process of your heart beating.\ The 4th year of your life is a temporal part of your life + [copied from inverse property 'temporal part of'] the process boundary which separates the 3rd and 4th years of your life. + [copied from inverse property 'temporal part of'] your heart beating from 4pm to 5pm today is a temporal part of the process of your heart beating + [copied from inverse property 'temporal part of'] b proper_temporal_part_of c =Def. b temporal_part_of c & not (b = c). (axiom label in BFO2 Reference: [116-001]) + has-t-part + [copied from inverse property 'temporal part of'] b temporal_part_of c =Def.b occurrent_part_of c & & for some temporal region t, b occupies_temporal_region t & for all occurrents d, t (if d occupies_temporal_region t & t occurrent_part_of t then (d occurrent_part_of a iff d occurrent_part_of b)). (axiom label in BFO2 Reference: [078-003]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + has spatial occupant at some time + r-location-of_st + [copied from inverse property 'occupies spatial region at some time'] BFO2 Reference: independent continuant + [copied from inverse property 'occupies spatial region at some time'] b occupies_spatial_region r at t means that r is a spatial region in which independent continuant b is exactly located (axiom label in BFO2 Reference: [041-002]) + [copied from inverse property 'occupies spatial region at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'occupies spatial region at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'occupies spatial region@en'(x,y,t) + [copied from inverse property 'occupies spatial region at some time'] BFO2 Reference: spatial region + + + + + + + + + + + + + + + + + + + + + + + has location at some time + [copied from inverse property 'located in at some time'] Mary located_in Salzburg + has-location_st + [copied from inverse property 'located in at some time'] your arm located_in your body + [copied from inverse property 'located in at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'located in at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'located in@en'(x,y,t) + [copied from inverse property 'located in at some time'] BFO2 Reference: independent continuant + [copied from inverse property 'located in at some time'] this portion of cocaine located_in this portion of blood + [copied from inverse property 'located in at some time'] this stem cell located_in this portion of bone marrow + [copied from inverse property 'located in at some time'] b located_in c at t = Def. b and c are independent continuants, and the region at which b is located at t is a (proper or improper) continuant_part_of the region at which c is located at t. (axiom label in BFO2 Reference: [045-001]) + [copied from inverse property 'located in at some time'] the Empire State Building located_in New York. + + + + + + + + + + + + + + + + + + + + + + + has specific dependent at some time + [copied from inverse property 'specifically depends on at some time'] reciprocal s-dependence between occurrents: a process of increasing the volume of a portion of gas while temperature remains constant and the associated process of decreasing the pressure exerted by the gas + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of hitting a ball with a cricket bat + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of paying cash to a merchant in exchange for a bag of figs + [copied from inverse property 'specifically depends on at some time'] the one-sided dependence of an occurrent on an independent continuant: football match on the players, the ground, the ball + has-s-dep_st + [copied from inverse property 'specifically depends on at some time'] BFO 2 Reference: S-dependence is just one type of dependence among many; it is what, in the literature, is referred to as ‘existential dependence’ [87, 46, 65, 20 + [copied from inverse property 'specifically depends on at some time'] a shape s-depends_on the shaped object + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of a dependent continuant on an independent continuant: an instance of headache s-depends_on some head + [copied from inverse property 'specifically depends on at some time'] the three-sided reciprocal s-dependence of the pitch, timbre and volume of a tone [45 + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of a process on something: an instance of seeing (a relational process) s-depends_on some organism and on some seen entity, which may be an occurrent or a continuant + [copied from inverse property 'specifically depends on at some time'] a gait s-depends_on the walking object. (All at some specific time.) + [copied from inverse property 'specifically depends on at some time'] To say that b s-depends_on a at t is to say that b and c do not share common parts & b is of its nature such that it cannot exist unless c exists & b is not a boundary of c and b is not a site of which c is the host [64 + [copied from inverse property 'specifically depends on at some time'] BFO 2 Reference: the relation of s-depends_on does not in every case require simultaneous existence of its relata. Note the difference between such cases and the cases of continuant universals defined historically: the act of answering depends existentially on the prior act of questioning; the human being who was baptized or who answered a question does not himself depend existentially on the prior act of baptism or answering. He would still exist even if these acts had never taken place. + [copied from inverse property 'specifically depends on at some time'] reciprocal s-dependence between occurrents: in a game of chess the process of playing with the white pieces is mutually dependent on the process of playing with the black pieces + [copied from inverse property 'specifically depends on at some time'] the three-sided reciprocal s-dependence of the hue, saturation and brightness of a color [45 + [copied from inverse property 'specifically depends on at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'specifically depends on at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'specifically depends on@en'(x,y,t) + [copied from inverse property 'specifically depends on at some time'] reciprocal s-dependence between occurrents: a process of buying and the associated process of selling + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of one occurrent on another: a process of answering a question is dependent on a prior process of asking a question + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of one occurrent on another: a process of obeying a command is dependent on a prior process of issuing a command + [copied from inverse property 'specifically depends on at some time'] BFO 2 Reference: An entity – for example an act of communication or a game of football – can s-depends_on more than one entity. Complex phenomena for example in the psychological and social realms (such as inferring, commanding and requesting) or in the realm of multi-organismal biological processes (such as infection and resistance), will involve multiple families of dependence relations, involving both continuants and occurrents [1, 4, 28 + [copied from inverse property 'specifically depends on at some time'] A pain s-depends_on the organism that is experiencing the pain + [copied from inverse property 'specifically depends on at some time'] the one-sided dependence of an occurrent on an independent continuant: handwave on a hand + [copied from inverse property 'specifically depends on at some time'] the two-sided reciprocal s-dependence of the roles of husband and wife [20 + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of a process on something: a process of cell death s-depends_on a cell + [copied from inverse property 'specifically depends on at some time'] BFO2 Reference: specifically dependent continuant\; process; process boundary + [copied from inverse property 'specifically depends on at some time'] one-sided s-dependence of a dependent continuant on an independent continuant: an instance of temperature s-depends_on some organism + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + has spatiotemporal occupant + occupied-by + [copied from inverse property 'occupies spatiotemporal region'] BFO 2 Reference: The occupies_spatiotemporal_region and occupies_temporal_region relations are the counterpart, on the occurrent side, of the relation occupies_spatial_region. + [copied from inverse property 'occupies spatiotemporal region'] p occupies_spatiotemporal_region s. This is a primitive relation between an occurrent p and the spatiotemporal region s which is its spatiotemporal extent. (axiom label in BFO2 Reference: [082-003]) + + + + + + + + + + + + + + + + + + + + + + + material basis of at some time + material-basis-of_st + + + + + + + + + + + + + + + + + + + + + + + member part of at some time + BFO2 Reference: object aggregate + member-part-of_st + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'member part of at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'member part of@en'(x,y,t) + (forall (x y t) (if (memberPartOfAt x y t) (continuantPartOfAt x y t))) // axiom label in BFO2 CLIF: [104-001] + BFO2 Reference: object + b member_part_of c at t =Def. b is an object & there is at t a mutually exhaustive and pairwise disjoint partition of c into objects x1, …, xn (for some n &gt; 1) with b = xi for some 1 ≤ i ≤ n. (axiom label in BFO2 Reference: [026-004]) + each piece in a chess set is a member part of the chess set; each Beatle in the collection called The Beatles is a member part of The Beatles. + each tree in a forest is a member_part of the forest + if b member_part_of c at t then b continuant_part_of c at t. (axiom label in BFO2 Reference: [104-001]) + memberPartOfAt + + + + + + + + + + + + + + + + + + + + + if b member_part_of c at t then b continuant_part_of c at t. (axiom label in BFO2 Reference: [104-001]) + + + + + + (forall (x y t) (if (memberPartOfAt x y t) (continuantPartOfAt x y t))) // axiom label in BFO2 CLIF: [104-001] + + + + + + b member_part_of c at t =Def. b is an object & there is at t a mutually exhaustive and pairwise disjoint partition of c into objects x1, …, xn (for some n &gt; 1) with b = xi for some 1 ≤ i ≤ n. (axiom label in BFO2 Reference: [026-004]) + + + + + + + + + + + occupies spatiotemporal region + occupies + BFO 2 Reference: The occupies_spatiotemporal_region and occupies_temporal_region relations are the counterpart, on the occurrent side, of the relation occupies_spatial_region. + occupiesSpatiotemporalRegion + p occupies_spatiotemporal_region s. This is a primitive relation between an occurrent p and the spatiotemporal region s which is its spatiotemporal extent. (axiom label in BFO2 Reference: [082-003]) + + + + + + + + + + + + + p occupies_spatiotemporal_region s. This is a primitive relation between an occurrent p and the spatiotemporal region s which is its spatiotemporal extent. (axiom label in BFO2 Reference: [082-003]) + + + + + + + + + + + + + + + + + + part of occurrent + [copied from inverse property 'has occurrent part'] b has_occurrent_part c = Def. c occurrent_part_of b. (axiom label in BFO2 Reference: [007-001]) + BFO2 Reference: occurrent + (forall (x) (if (Occurrent x) (occurrentPartOf x x))) // axiom label in BFO2 CLIF: [113-002] + (forall (x y t) (if (and (occurrentPartOf x y t) (occurrentPartOf y x t)) (= x y))) // axiom label in BFO2 CLIF: [123-001] + occurrentPartOf + (forall (x y z) (if (and (occurrentPartOf x y) (occurrentPartOf y z)) (occurrentPartOf x z))) // axiom label in BFO2 CLIF: [112-001] + o-part-of + (forall (x y t) (if (exists (v) (and (occurrentPartOf v x t) (occurrentPartOf v y t))) (exists (z) (forall (u w) (iff (iff (occurrentPartOf w u t) (and (occurrentPartOf w x t) (occurrentPartOf w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [125-001] + (forall (x y t) (if (and (occurrentPartOf x y t) (not (= x y))) (exists (z) (and (occurrentPartOf z y t) (not (exists (w) (and (occurrentPartOf w x t) (occurrentPartOf w z t)))))))) // axiom label in BFO2 CLIF: [124-001] + BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + Mary’s 5th birthday occurrent_part_of Mary’s life + The process of a footballer’s heart beating once is an occurrent part but not a temporal_part of a game of football. + b occurrent_part_of c =Def. b is a part of c & b and c are occurrents. (axiom label in BFO2 Reference: [003-002]) + occurrent_part_of is antisymmetric. (axiom label in BFO2 Reference: [123-001]) + occurrent_part_of is reflexive (every occurrent entity is an occurrent_part_of itself). (axiom label in BFO2 Reference: [113-002]) + occurrent_part_of is transitive. (axiom label in BFO2 Reference: [112-001]) + occurrent_part_of satisfies unique product. (axiom label in BFO2 Reference: [125-001]) + occurrent_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [124-001]) + the first set of the tennis match occurrent_part_of the tennis match. + + + + + + + (forall (x y t) (if (and (occurrentPartOf x y t) (not (= x y))) (exists (z) (and (occurrentPartOf z y t) (not (exists (w) (and (occurrentPartOf w x t) (occurrentPartOf w z t)))))))) // axiom label in BFO2 CLIF: [124-001] + + + + + + (forall (x) (if (Occurrent x) (occurrentPartOf x x))) // axiom label in BFO2 CLIF: [113-002] + + + + + + (forall (x y t) (if (exists (v) (and (occurrentPartOf v x t) (occurrentPartOf v y t))) (exists (z) (forall (u w) (iff (iff (occurrentPartOf w u t) (and (occurrentPartOf w x t) (occurrentPartOf w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [125-001] + + + + + + + + + + + + (forall (x y z) (if (and (occurrentPartOf x y) (occurrentPartOf y z)) (occurrentPartOf x z))) // axiom label in BFO2 CLIF: [112-001] + + + + + + + + + + + + occurrent_part_of is antisymmetric. (axiom label in BFO2 Reference: [123-001]) + + + + + + occurrent_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [124-001]) + + + + + + b occurrent_part_of c =Def. b is a part of c & b and c are occurrents. (axiom label in BFO2 Reference: [003-002]) + + + + + + + + + + + + occurrent_part_of is transitive. (axiom label in BFO2 Reference: [112-001]) + + + + + + occurrent_part_of satisfies unique product. (axiom label in BFO2 Reference: [125-001]) + + + + + + (forall (x y t) (if (and (occurrentPartOf x y t) (occurrentPartOf y x t)) (= x y))) // axiom label in BFO2 CLIF: [123-001] + + + + + + occurrent_part_of is reflexive (every occurrent entity is an occurrent_part_of itself). (axiom label in BFO2 Reference: [113-002]) + + + + + + + + + + + process profile of + profile-of + processProfileOf + + + + + + + + + + + + + + + + + + + + + + + + + proper temporal part of + t-ppart-of + properTemporalPartOf + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + proper part of continuant at all times + (iff (properContinuantPartOfAt a b t) (and (continuantPartOfAt a b t) (not (= a b)))) // axiom label in BFO2 CLIF: [004-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'proper part of continuant at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'proper part of continuant@en(x,y,t)'. + b proper_continuant_part_of c at t =Def. b continuant_part_of c at t & b and c are not identical. (axiom label in BFO2 Reference: [004-001]) + properContinuantPartOfAt + c-ppart-of_at + + + + + + b proper_continuant_part_of c at t =Def. b continuant_part_of c at t & b and c are not identical. (axiom label in BFO2 Reference: [004-001]) + + + + + + (iff (properContinuantPartOfAt a b t) (and (continuantPartOfAt a b t) (not (= a b)))) // axiom label in BFO2 CLIF: [004-001] + + + + + + + + + + + + proper part of occurrent + (iff (properOccurrentPartOf a b) (and (occurrentPartOf a b) (not (= a b)))) // axiom label in BFO2 CLIF: [005-001] + b proper_occurrent_part_of c =Def. b occurrent_part_of c & b and c are not identical. (axiom label in BFO2 Reference: [005-001]) + o-ppart-of + properOccurrentPartOf + [copied from inverse property 'has proper occurrent part'] b has_proper_occurrent_part c = Def. c proper_occurrent_part_of b. [XXX-001 + + + + + + + + + + + + + + + + + + + + b proper_occurrent_part_of c =Def. b occurrent_part_of c & b and c are not identical. (axiom label in BFO2 Reference: [005-001]) + + + + + + + + + + + + (iff (properOccurrentPartOf a b) (and (occurrentPartOf a b) (not (= a b)))) // axiom label in BFO2 CLIF: [005-001] + + + + + + + + + + + + temporal part of + t-part-of + (iff (temporalPartOf a b) (and (occurrentPartOf a b) (exists (t) (and (TemporalRegion t) (occupiesSpatioTemporalRegion a t))) (forall (c t_1) (if (and (Occurrent c) (occupiesSpatioTemporalRegion c t_1) (occurrentPartOf t_1 r)) (iff (occurrentPartOf c a) (occurrentPartOf c b)))))) // axiom label in BFO2 CLIF: [078-003] + (iff (properTemporalPartOf a b) (and (temporalPartOf a b) (not (= a b)))) // axiom label in BFO2 CLIF: [116-001] + temporalPartOf + (forall (x y) (if (properTemporalPartOf x y) (exists (z) (and (properTemporalPartOf z y) (not (exists (w) (and (temporalPartOf w x) (temporalPartOf w z)))))))) // axiom label in BFO2 CLIF: [117-002] + b proper_temporal_part_of c =Def. b temporal_part_of c & not (b = c). (axiom label in BFO2 Reference: [116-001]) + b temporal_part_of c =Def.b occurrent_part_of c & & for some temporal region t, b occupies_temporal_region t & for all occurrents d, t (if d occupies_temporal_region t & t occurrent_part_of t then (d occurrent_part_of a iff d occurrent_part_of b)). (axiom label in BFO2 Reference: [078-003]) + if b proper_temporal_part_of c, then there is some d which is a proper_temporal_part_of c and which shares no parts with b. (axiom label in BFO2 Reference: [117-002]) + the 4th year of your life is a temporal part of your life\. The first quarter of a game of football is a temporal part of the whole game\. The process of your heart beating from 4pm to 5pm today is a temporal part of the entire process of your heart beating.\ The 4th year of your life is a temporal part of your life + the process boundary which separates the 3rd and 4th years of your life. + your heart beating from 4pm to 5pm today is a temporal part of the process of your heart beating + + + + + + + + (iff (temporalPartOf a b) (and (occurrentPartOf a b) (exists (t) (and (TemporalRegion t) (occupiesSpatioTemporalRegion a t))) (forall (c t_1) (if (and (Occurrent c) (occupiesSpatioTemporalRegion c t_1) (occurrentPartOf t_1 r)) (iff (occurrentPartOf c a) (occurrentPartOf c b)))))) // axiom label in BFO2 CLIF: [078-003] + + + + + + b proper_temporal_part_of c =Def. b temporal_part_of c & not (b = c). (axiom label in BFO2 Reference: [116-001]) + + + + + + (forall (x y) (if (properTemporalPartOf x y) (exists (z) (and (properTemporalPartOf z y) (not (exists (w) (and (temporalPartOf w x) (temporalPartOf w z)))))))) // axiom label in BFO2 CLIF: [117-002] + + + + + + + + + + + + (iff (properTemporalPartOf a b) (and (temporalPartOf a b) (not (= a b)))) // axiom label in BFO2 CLIF: [116-001] + + + + + + b temporal_part_of c =Def.b occurrent_part_of c & & for some temporal region t, b occupies_temporal_region t & for all occurrents d, t (if d occupies_temporal_region t & t occurrent_part_of t then (d occurrent_part_of a iff d occurrent_part_of b)). (axiom label in BFO2 Reference: [078-003]) + + + + + + + + + + + + if b proper_temporal_part_of c, then there is some d which is a proper_temporal_part_of c and which shares no parts with b. (axiom label in BFO2 Reference: [117-002]) + + + + + + + + + + + + + + + + + projects onto spatial region at some time + st-projects-onto-s_st + + + + + + + + + + + + + + + + + + + + + + + + spatial projection of spatiotemporal at some time + s-projection-of-st_st + + + + + + + + + + + + + + + + + + + + + + + projects onto temporal region + st-projects-onto-t + + + + + + + + + + + + + + + + + + + + + + + + + temporal projection of spatiotemporal + t-projection-of-st + + + + + + + + + + + + + + + + + + + + + + + + occupies temporal region + occupiesTemporalRegion + spans + p occupies_temporal_region t. This is a primitive relation between an occurrent p and the temporal region t upon which the spatiotemporal region p occupies_spatiotemporal_region projects. (axiom label in BFO2 Reference: [132-001]) + + + + + + + + + + + + + + + + + + + + p occupies_temporal_region t. This is a primitive relation between an occurrent p and the temporal region t upon which the spatiotemporal region p occupies_spatiotemporal_region projects. (axiom label in BFO2 Reference: [132-001]) + + + + + + + + + + + has temporal occupant + [copied from inverse property 'occupies temporal region'] p occupies_temporal_region t. This is a primitive relation between an occurrent p and the temporal region t upon which the spatiotemporal region p occupies_spatiotemporal_region projects. (axiom label in BFO2 Reference: [132-001]) + spanOf + span-of + + + + + + + + + + + + + + + + + + + + + + + + during which exists + during-which-exists + [copied from inverse property 'exists at'] b exists_at t means: b is an entity which exists at some temporal region t. (axiom label in BFO2 Reference: [118-002]) + [copied from inverse property 'exists at'] BFO2 Reference: entity + [copied from inverse property 'exists at'] BFO2 Reference: temporal region + + + + + + + + + + + + + + + + + + + + + + + bearer of at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'bearer of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'bearer of@en(x,y,t)'. + BFO2 Reference: independent continuant that is not a spatial region + BFO2 Reference: specifically dependent continuant + (iff (bearerOfAt a b t) (and (specificallyDependsOnAt b a t) (IndependentContinuant a) (not (SpatialRegion a)) (existsAt b t))) // axiom label in BFO2 CLIF: [053-004] + b bearer_of c at t =Def. c s-depends_on b at t & b is an independent continuant that is not a spatial region. (axiom label in BFO2 Reference: [053-004]) + bearer-of_at + bearerOfAt + + + + + + + + + + + + + + + + + + + + + + (iff (bearerOfAt a b t) (and (specificallyDependsOnAt b a t) (IndependentContinuant a) (not (SpatialRegion a)) (existsAt b t))) // axiom label in BFO2 CLIF: [053-004] + + + + + + b bearer_of c at t =Def. c s-depends_on b at t & b is an independent continuant that is not a spatial region. (axiom label in BFO2 Reference: [053-004]) + + + + + + + + + + + + + + + + + + + + + + + + + + has quality at all times + has-q_at + + + + + + + + + + + + + + + + + has function at all times + has-f_at + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has function at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has function@en(x,y,t)'. + (iff (hasFunctionAt a b t) (functionOf b a t)) // axiom label in BFO2 CLIF: [070-001] + a has_function b at t =Def. b function_of a at t. (axiom label in BFO2 Reference: [070-001]) + hasFunctionAt + + + + + + a has_function b at t =Def. b function_of a at t. (axiom label in BFO2 Reference: [070-001]) + + + + + + + + + + + + (iff (hasFunctionAt a b t) (functionOf b a t)) // axiom label in BFO2 CLIF: [070-001] + + + + + + + + + + + has role at all times + hasRoleAt + has-r_at + (iff (hasRoleAt a b t) (roleOfAt b a t)) // axiom label in BFO2 CLIF: [068-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has role at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has role@en(x,y,t)'. + a has_role b at t =Def. b role_of a at t. (axiom label in BFO2 Reference: [068-001]) + + + + + + + + + + + + (iff (hasRoleAt a b t) (roleOfAt b a t)) // axiom label in BFO2 CLIF: [068-001] + + + + + + a has_role b at t =Def. b role_of a at t. (axiom label in BFO2 Reference: [068-001]) + + + + + + + + + + + has disposition at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has disposition at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has disposition@en(x,y,t)'. + a has_disposition b at t =Def. b disposition_of a at t. (axiom label in BFO2 Reference: [069-001]) + has-d_at + hasDispositionAt + (iff (hasDispositionAt a b t) (dispositionOf b a t)) // axiom label in BFO2 CLIF: [069-001] + + + + + + (iff (hasDispositionAt a b t) (dispositionOf b a t)) // axiom label in BFO2 CLIF: [069-001] + + + + + + a has_disposition b at t =Def. b disposition_of a at t. (axiom label in BFO2 Reference: [069-001]) + + + + + + + + + + + + + + + + + material basis of at all times + material-basis-of_at + + + + + + + + + + + + + + + + + + + + + + + + concretizes at all times + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'concretizes at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'concretizes@en(x,y,t)'. + (forall (x y t) (if (concretizesAt x y t) (and (SpecificallyDependentContinuant x) (GenericallyDependentContinuant y) (exists (z) (and (IndependentContinuant z) (specificallyDependsOnAt x z t) (genericallyDependsOnAt y z t)))))) // axiom label in BFO2 CLIF: [075-002] + concretizes_at + (forall (x y t) (if (genericallyDependsOnAt x y t) (exists (z) (and (concretizesAt z x t) (specificallyDependsOnAt z y t))))) // axiom label in BFO2 CLIF: [076-001] + You may concretize a piece of software by installing it in your computer + You may concretize a recipe that you find in a cookbook by turning it into a plan which exists as a realizable dependent continuant in your head. + b concretizes c at t means: b is a specifically dependent continuant & c is a generically dependent continuant & for some independent continuant that is not a spatial region d, b s-depends_on d at t & c g-depends on d at t & if c migrates from bearer d to another bearer e than a copy of b will be created in e. (axiom label in BFO2 Reference: [075-002]) + concretizesAt + if b g-depends on c at some time t, then there is some d, such that d concretizes b at t and d s-depends_on c at t. (axiom label in BFO2 Reference: [076-001]) + you may concretize a poem as a pattern of memory traces in your head + + + + + if b g-depends on c at some time t, then there is some d, such that d concretizes b at t and d s-depends_on c at t. (axiom label in BFO2 Reference: [076-001]) + + + + + + (forall (x y t) (if (concretizesAt x y t) (and (SpecificallyDependentContinuant x) (GenericallyDependentContinuant y) (exists (z) (and (IndependentContinuant z) (specificallyDependsOnAt x z t) (genericallyDependsOnAt y z t)))))) // axiom label in BFO2 CLIF: [075-002] + + + + + + (forall (x y t) (if (genericallyDependsOnAt x y t) (exists (z) (and (concretizesAt z x t) (specificallyDependsOnAt z y t))))) // axiom label in BFO2 CLIF: [076-001] + + + + + + b concretizes c at t means: b is a specifically dependent continuant & c is a generically dependent continuant & for some independent continuant that is not a spatial region d, b s-depends_on d at t & c g-depends on d at t & if c migrates from bearer d to another bearer e than a copy of b will be created in e. (axiom label in BFO2 Reference: [075-002]) + + + + + + + + + + + concretized by at all times + concretized-by_at + + + + + + + + + + participates in at all times + participatesInAt + participates-in_at + + + + + + + + + + has participant at all times + BFO2 Reference: independent continuant that is not a spatial region, specifically dependent continuant, generically dependent continuant + BFO2 Reference: process + (forall (x y t) (if (and (hasParticipantAt x y t) (GenericallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (genericallyDependsOn y z t) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [091-003] + (forall (x y t) (if (hasParticipantAt x y t) (Occurrent x))) // axiom label in BFO2 CLIF: [087-001] + (forall (x y t) (if (and (hasParticipantAt x y t) (SpecificallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t) (specificallyDependsOnAt y z t))))) // axiom label in BFO2 CLIF: [090-003] + (forall (x y t) (if (hasParticipantAt x y t) (existsAt y t))) // axiom label in BFO2 CLIF: [089-001] + has-participant_at + (forall (x y t) (if (hasParticipantAt x y t) (Continuant y))) // axiom label in BFO2 CLIF: [088-001] + hasParticipantAt + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has participant at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has participant@en(x,y,t)'. + BFO 2 Reference: Spatial regions do not participate in processes. + has_participant is an instance-level relation between a process, a continuant, and a temporal region at which the continuant participates in some way in the process. (axiom label in BFO2 Reference: [086-003]) + if b has_participant c at t & c is a generically dependent continuant, then there is some independent continuant that is not a spatial region d, and which is such that c g-depends on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [091-003]) + if b has_participant c at t & c is a specifically dependent continuant, then there is some independent continuant that is not a spatial region d, c s-depends_on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [090-003]) + if b has_participant c at t then b is an occurrent. (axiom label in BFO2 Reference: [087-001]) + if b has_participant c at t then c exists at t. (axiom label in BFO2 Reference: [089-001]) + if b has_participant c at t then c is a continuant. (axiom label in BFO2 Reference: [088-001]) + + + + + + + + + + + + + + + + if b has_participant c at t & c is a generically dependent continuant, then there is some independent continuant that is not a spatial region d, and which is such that c g-depends on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [091-003]) + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (Continuant y))) // axiom label in BFO2 CLIF: [088-001] + + + + + + if b has_participant c at t then b is an occurrent. (axiom label in BFO2 Reference: [087-001]) + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (Occurrent x))) // axiom label in BFO2 CLIF: [087-001] + + + + + + (forall (x y t) (if (hasParticipantAt x y t) (existsAt y t))) // axiom label in BFO2 CLIF: [089-001] + + + + + + if b has_participant c at t then c exists at t. (axiom label in BFO2 Reference: [089-001]) + + + + + + has_participant is an instance-level relation between a process, a continuant, and a temporal region at which the continuant participates in some way in the process. (axiom label in BFO2 Reference: [086-003]) + + + + + + (forall (x y t) (if (and (hasParticipantAt x y t) (SpecificallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t) (specificallyDependsOnAt y z t))))) // axiom label in BFO2 CLIF: [090-003] + + + + + + if b has_participant c at t & c is a specifically dependent continuant, then there is some independent continuant that is not a spatial region d, c s-depends_on d at t & b s-depends_on d at t. (axiom label in BFO2 Reference: [090-003]) + + + + + + if b has_participant c at t then c is a continuant. (axiom label in BFO2 Reference: [088-001]) + + + + + + (forall (x y t) (if (and (hasParticipantAt x y t) (GenericallyDependentContinuant y)) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (genericallyDependsOn y z t) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [091-003] + + + + + + + + + + + has specific dependent at all times + has-s-dep_at + + + + + + + + + + specifically depends on at some time + s-depends-on_st + (forall (x y t) (if (and (Occurrent x) (IndependentContinuant y) (specificallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (specificallyDependsOnAt x y t_1))))) // axiom label in BFO2 CLIF: [015-002] + BFO2 Reference: specifically dependent continuant\; process; process boundary + (forall (x y t) (if (specificallyDependsOnAt x y t) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [136-001] + specificallyDependsOn + (forall (x y z t) (if (and (specificallyDependsOnAt x y t) (specificallyDependsOnAt y z t)) (specificallyDependsOnAt x z t))) // axiom label in BFO2 CLIF: [054-002] + (forall (x) (if (exists (y t) (specificallyDependsOnAt x y t)) (not (MaterialEntity x)))) // axiom label in BFO2 CLIF: [052-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'specifically depends on at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'specifically depends on@en'(x,y,t) + (forall (x y t) (if (and (Entity x) (or (continuantPartOfAt y x t) (continuantPartOfAt x y t) (occurrentPartOf x y) (occurrentPartOf y x))) (not (specificallyDependsOnAt x y t)))) // axiom label in BFO2 CLIF: [013-002] + A pain s-depends_on the organism that is experiencing the pain + BFO 2 Reference: An entity – for example an act of communication or a game of football – can s-depends_on more than one entity. Complex phenomena for example in the psychological and social realms (such as inferring, commanding and requesting) or in the realm of multi-organismal biological processes (such as infection and resistance), will involve multiple families of dependence relations, involving both continuants and occurrents [1, 4, 28 + BFO 2 Reference: S-dependence is just one type of dependence among many; it is what, in the literature, is referred to as ‘existential dependence’ [87, 46, 65, 20 + BFO 2 Reference: the relation of s-depends_on does not in every case require simultaneous existence of its relata. Note the difference between such cases and the cases of continuant universals defined historically: the act of answering depends existentially on the prior act of questioning; the human being who was baptized or who answered a question does not himself depend existentially on the prior act of baptism or answering. He would still exist even if these acts had never taken place. + If b is s-depends_on something at some time, then b is not a material entity. (axiom label in BFO2 Reference: [052-001]) + If b s-depends_on something at t, then there is some c, which is an independent continuant and not a spatial region, such that b s-depends_on c at t. (axiom label in BFO2 Reference: [136-001]) + If occurrent b s-depends_on some independent continuant c at t, then b s-depends_on c at every time at which b exists. (axiom label in BFO2 Reference: [015-002]) + To say that b s-depends_on a at t is to say that b and c do not share common parts & b is of its nature such that it cannot exist unless c exists & b is not a boundary of c and b is not a site of which c is the host [64 + a gait s-depends_on the walking object. (All at some specific time.) + a shape s-depends_on the shaped object + an entity does not s-depend_on any of its (continuant or occurrent) parts or on anything it is part of. (axiom label in BFO2 Reference: [013-002]) + if b s-depends_on c at t & c s-depends_on d at t then b s-depends_on d at t. (axiom label in BFO2 Reference: [054-002]) + one-sided s-dependence of a dependent continuant on an independent continuant: an instance of headache s-depends_on some head + one-sided s-dependence of a dependent continuant on an independent continuant: an instance of temperature s-depends_on some organism + one-sided s-dependence of a process on something: a process of cell death s-depends_on a cell + one-sided s-dependence of a process on something: an instance of seeing (a relational process) s-depends_on some organism and on some seen entity, which may be an occurrent or a continuant + one-sided s-dependence of one occurrent on another: a process of answering a question is dependent on a prior process of asking a question + one-sided s-dependence of one occurrent on another: a process of obeying a command is dependent on a prior process of issuing a command + one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of hitting a ball with a cricket bat + one-sided s-dependence of one occurrent on multiple independent continuants: a relational process of paying cash to a merchant in exchange for a bag of figs + reciprocal s-dependence between occurrents: a process of buying and the associated process of selling + reciprocal s-dependence between occurrents: a process of increasing the volume of a portion of gas while temperature remains constant and the associated process of decreasing the pressure exerted by the gas + reciprocal s-dependence between occurrents: in a game of chess the process of playing with the white pieces is mutually dependent on the process of playing with the black pieces + the one-sided dependence of an occurrent on an independent continuant: football match on the players, the ground, the ball + the one-sided dependence of an occurrent on an independent continuant: handwave on a hand + the three-sided reciprocal s-dependence of the hue, saturation and brightness of a color [45 + the three-sided reciprocal s-dependence of the pitch, timbre and volume of a tone [45 + the two-sided reciprocal s-dependence of the roles of husband and wife [20 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + if b s-depends_on c at t & c s-depends_on d at t then b s-depends_on d at t. (axiom label in BFO2 Reference: [054-002]) + + + + + + (forall (x y t) (if (and (Occurrent x) (IndependentContinuant y) (specificallyDependsOnAt x y t)) (forall (t_1) (if (existsAt x t_1) (specificallyDependsOnAt x y t_1))))) // axiom label in BFO2 CLIF: [015-002] + + + + + + + + + + + + + + + + + + + + + + + + + + + (forall (x y t) (if (specificallyDependsOnAt x y t) (exists (z) (and (IndependentContinuant z) (not (SpatialRegion z)) (specificallyDependsOnAt x z t))))) // axiom label in BFO2 CLIF: [136-001] + + + + + + (forall (x y t) (if (and (Entity x) (or (continuantPartOfAt y x t) (continuantPartOfAt x y t) (occurrentPartOf x y) (occurrentPartOf y x))) (not (specificallyDependsOnAt x y t)))) // axiom label in BFO2 CLIF: [013-002] + + + + + + (forall (x) (if (exists (y t) (specificallyDependsOnAt x y t)) (not (MaterialEntity x)))) // axiom label in BFO2 CLIF: [052-001] + + + + + + (forall (x y z t) (if (and (specificallyDependsOnAt x y t) (specificallyDependsOnAt y z t)) (specificallyDependsOnAt x z t))) // axiom label in BFO2 CLIF: [054-002] + + + + + + If b s-depends_on something at t, then there is some c, which is an independent continuant and not a spatial region, such that b s-depends_on c at t. (axiom label in BFO2 Reference: [136-001]) + + + + + + an entity does not s-depend_on any of its (continuant or occurrent) parts or on anything it is part of. (axiom label in BFO2 Reference: [013-002]) + + + + + + If occurrent b s-depends_on some independent continuant c at t, then b s-depends_on c at every time at which b exists. (axiom label in BFO2 Reference: [015-002]) + + + + + + If b is s-depends_on something at some time, then b is not a material entity. (axiom label in BFO2 Reference: [052-001]) + + + + + + + + + + + + has location at all times + has-location_at + + + + + + + + + + located in at some time + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (locatedInAt x y t) (continuantPartOfAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [049-001] + BFO2 Reference: independent continuant + (forall (x y z t) (if (and (locatedInAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [046-001] + (iff (locatedInAt a b t) (and (IndependentContinuant a) (IndependentContinuant b) (exists (r_1 r_2) (and (occupiesSpatialRegionAt a r_1 t) (occupiesSpatialRegionAt b r_2 t) (continuantPartOfAt r_1 r_2 t))))) // axiom label in BFO2 CLIF: [045-001] + locatedInAt + located-in_st + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (continuantPartOfAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [048-001] + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'located in at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'located in@en'(x,y,t) + Located_in is transitive. (axiom label in BFO2 Reference: [046-001]) + Mary located_in Salzburg + b located_in c at t = Def. b and c are independent continuants, and the region at which b is located at t is a (proper or improper) continuant_part_of the region at which c is located at t. (axiom label in BFO2 Reference: [045-001]) + for all independent continuants b, c, and d: if b continuant_part_of c at t & c located_in d at t, then b located_in d at t. (axiom label in BFO2 Reference: [048-001]) + for all independent continuants b, c, and d: if b located_in c at t & c continuant_part_of d at t, then b located_in d at t. (axiom label in BFO2 Reference: [049-001]) + the Empire State Building located_in New York. + this portion of cocaine located_in this portion of blood + this stem cell located_in this portion of bone marrow + your arm located_in your body + + + + + + + b located_in c at t = Def. b and c are independent continuants, and the region at which b is located at t is a (proper or improper) continuant_part_of the region at which c is located at t. (axiom label in BFO2 Reference: [045-001]) + + + + + + (forall (x y z t) (if (and (locatedInAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [046-001] + + + + + + (iff (locatedInAt a b t) (and (IndependentContinuant a) (IndependentContinuant b) (exists (r_1 r_2) (and (occupiesSpatialRegionAt a r_1 t) (occupiesSpatialRegionAt b r_2 t) (continuantPartOfAt r_1 r_2 t))))) // axiom label in BFO2 CLIF: [045-001] + + + + + + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (locatedInAt x y t) (continuantPartOfAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [049-001] + + + + + + + + + + + + for all independent continuants b, c, and d: if b located_in c at t & c continuant_part_of d at t, then b located_in d at t. (axiom label in BFO2 Reference: [049-001]) + + + + + + Located_in is transitive. (axiom label in BFO2 Reference: [046-001]) + + + + + + for all independent continuants b, c, and d: if b continuant_part_of c at t & c located_in d at t, then b located_in d at t. (axiom label in BFO2 Reference: [048-001]) + + + + + + + + + + + + (forall (x y z t) (if (and (IndependentContinuant x) (IndependentContinuant y) (IndependentContinuant z) (continuantPartOfAt x y t) (locatedInAt y z t)) (locatedInAt x z t))) // axiom label in BFO2 CLIF: [048-001] + + + + + + + + + + + has member part at all times + has-member-part_at + + + + + + + + + + + + member part of at all times + BFO2 Reference: object + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'member part of at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'member part of@en(x,y,t)'. + memberPartOfAt + BFO2 Reference: object aggregate + member-part-of_at + (forall (x y t) (if (memberPartOfAt x y t) (continuantPartOfAt x y t))) // axiom label in BFO2 CLIF: [104-001] + b member_part_of c at t =Def. b is an object & there is at t a mutually exhaustive and pairwise disjoint partition of c into objects x1, …, xn (for some n &gt; 1) with b = xi for some 1 ≤ i ≤ n. (axiom label in BFO2 Reference: [026-004]) + each piece in a chess set is a member part of the chess set; each Beatle in the collection called The Beatles is a member part of The Beatles. + each tree in a forest is a member_part of the forest + if b member_part_of c at t then b continuant_part_of c at t. (axiom label in BFO2 Reference: [104-001]) + + + + + + + if b member_part_of c at t then b continuant_part_of c at t. (axiom label in BFO2 Reference: [104-001]) + + + + + + (forall (x y t) (if (memberPartOfAt x y t) (continuantPartOfAt x y t))) // axiom label in BFO2 CLIF: [104-001] + + + + + + b member_part_of c at t =Def. b is an object & there is at t a mutually exhaustive and pairwise disjoint partition of c into objects x1, …, xn (for some n &gt; 1) with b = xi for some 1 ≤ i ≤ n. (axiom label in BFO2 Reference: [026-004]) + + + + + + + + + + + has proper continuant part at some time + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has proper continuant part at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has proper continuant part@en'(x,y,t) + b has_proper_continuant_part c at t = Def. c proper_continuant_part_of b at t. [XXX-001 + c-has-ppart_st + [copied from inverse property 'proper part of continuant at some time'] b proper_continuant_part_of c at t =Def. b continuant_part_of c at t & b and c are not identical. (axiom label in BFO2 Reference: [004-001]) + hasProperContinuantPartAt + [copied from inverse property 'proper part of continuant at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'proper part of continuant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'proper part of continuant@en'(x,y,t) + + + + + + + + + + + + + + + + + + + + + + + + proper part of continuant at some time + c-ppart-of_st + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'proper part of continuant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'proper part of continuant@en'(x,y,t) + properContinuantPartOfAt + [copied from inverse property 'has proper continuant part at some time'] b has_proper_continuant_part c at t = Def. c proper_continuant_part_of b at t. [XXX-001 + [copied from inverse property 'has proper continuant part at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has proper continuant part at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has proper continuant part@en'(x,y,t) + (iff (properContinuantPartOfAt a b t) (and (continuantPartOfAt a b t) (not (= a b)))) // axiom label in BFO2 CLIF: [004-001] + b proper_continuant_part_of c at t =Def. b continuant_part_of c at t & b and c are not identical. (axiom label in BFO2 Reference: [004-001]) + + + + + + + + + + + + + + (iff (properContinuantPartOfAt a b t) (and (continuantPartOfAt a b t) (not (= a b)))) // axiom label in BFO2 CLIF: [004-001] + + + + + + b proper_continuant_part_of c at t =Def. b continuant_part_of c at t & b and c are not identical. (axiom label in BFO2 Reference: [004-001]) + + + + + + + + + + + + + + + + + part of continuant at some time + (forall (x y t) (if (and (continuantPartOfAt x y t) (not (= x y))) (exists (z) (and (continuantPartOfAt z y t) (not (exists (w) (and (continuantPartOfAt w x t) (continuantPartOfAt w z t)))))))) // axiom label in BFO2 CLIF: [121-001] + (forall (x y z t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y z t)) (continuantPartOfAt x z t))) // axiom label in BFO2 CLIF: [110-001] + continuantPartOfAt + (forall (x y t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y x t)) (= x y))) // axiom label in BFO2 CLIF: [120-001] + BFO2 Reference: continuantThe range for ‘t’ (as in all cases throughout this document unless otherwise specified) is: temporal region. + (forall (x y t) (if (and (continuantPartOfAt x y t) (IndependentContinuant x)) (locatedInAt x y t))) // axiom label in BFO2 CLIF: [047-002] + BFO2 Reference: continuant + (forall (x y t) (if (exists (v) (and (continuantPartOfAt v x t) (continuantPartOfAt v y t))) (exists (z) (forall (u w) (iff (iff (continuantPartOfAt w u t) (and (continuantPartOfAt w x t) (continuantPartOfAt w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [122-001] + [copied from inverse property 'has continuant part at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has continuant part at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has continuant part@en'(x,y,t) + (forall (x t) (if (Continuant x) (continuantPartOfAt x x t))) // axiom label in BFO2 CLIF: [111-002] + (iff (ImmaterialEntity a) (and (IndependentContinuant a) (not (exists (b t) (and (MaterialEntity b) (continuantPartOfAt b a t)))))) // axiom label in BFO2 CLIF: [028-001] + [copied from inverse property 'has continuant part at some time'] b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + c-part-of_st + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'part of continuant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'part of continuant@en'(x,y,t) + BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + Mary’s arm continuant_part_of Mary in the time of her life prior to her operation + b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + continuant_part_of is antisymmetric. (axiom label in BFO2 Reference: [120-001]) + continuant_part_of is reflexive (every continuant entity is a continuant_part_of itself). (axiom label in BFO2 Reference: [111-002]) + continuant_part_of is transitive. (axiom label in BFO2 Reference: [110-001]) + continuant_part_of satisfies unique product. (axiom label in BFO2 Reference: [122-001]) + continuant_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [121-001]) + if b continuant_part_of c at t and b is an independent continuant, then b is located_in c at t. (axiom label in BFO2 Reference: [047-002]) + the Northern hemisphere of the planet Earth is a part of the planet Earth at all times at which the planet Earth exists. + + + + + + + b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + + + + + + + + + + + + continuant_part_of is transitive. (axiom label in BFO2 Reference: [110-001]) + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (IndependentContinuant x)) (locatedInAt x y t))) // axiom label in BFO2 CLIF: [047-002] + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (not (= x y))) (exists (z) (and (continuantPartOfAt z y t) (not (exists (w) (and (continuantPartOfAt w x t) (continuantPartOfAt w z t)))))))) // axiom label in BFO2 CLIF: [121-001] + + + + + + if b continuant_part_of c at t and b is an independent continuant, then b is located_in c at t. (axiom label in BFO2 Reference: [047-002]) + + + + + + continuant_part_of satisfies unique product. (axiom label in BFO2 Reference: [122-001]) + + + + + + (forall (x t) (if (Continuant x) (continuantPartOfAt x x t))) // axiom label in BFO2 CLIF: [111-002] + + + + + + (iff (ImmaterialEntity a) (and (IndependentContinuant a) (not (exists (b t) (and (MaterialEntity b) (continuantPartOfAt b a t)))))) // axiom label in BFO2 CLIF: [028-001] + + + + + + + + + + + + continuant_part_of is antisymmetric. (axiom label in BFO2 Reference: [120-001]) + + + + + + BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + + + + + + (forall (x y z t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y z t)) (continuantPartOfAt x z t))) // axiom label in BFO2 CLIF: [110-001] + + + + + + (forall (x y t) (if (exists (v) (and (continuantPartOfAt v x t) (continuantPartOfAt v y t))) (exists (z) (forall (u w) (iff (iff (continuantPartOfAt w u t) (and (continuantPartOfAt w x t) (continuantPartOfAt w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [122-001] + + + + + + continuant_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [121-001]) + + + + + + continuant_part_of is reflexive (every continuant entity is a continuant_part_of itself). (axiom label in BFO2 Reference: [111-002]) + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y x t)) (= x y))) // axiom label in BFO2 CLIF: [120-001] + + + + + + + + + + + + part of continuant at all times + (forall (x y t) (if (and (continuantPartOfAt x y t) (IndependentContinuant x)) (locatedInAt x y t))) // axiom label in BFO2 CLIF: [047-002] + (forall (x y t) (if (and (continuantPartOfAt x y t) (not (= x y))) (exists (z) (and (continuantPartOfAt z y t) (not (exists (w) (and (continuantPartOfAt w x t) (continuantPartOfAt w z t)))))))) // axiom label in BFO2 CLIF: [121-001] + BFO2 Reference: continuant + continuantPartOfAt + c-part-of_at + [copied from inverse property 'has continuant part at all times that part exists'] This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'part of continuant at all times' + (forall (x y z t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y z t)) (continuantPartOfAt x z t))) // axiom label in BFO2 CLIF: [110-001] + (forall (x y t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y x t)) (= x y))) // axiom label in BFO2 CLIF: [120-001] + [copied from inverse property 'has continuant part at all times that part exists'] forall(t) exists_at(y,t) -> exists_at(x,t) and 'has continuant part'(x,y,t) + BFO2 Reference: continuantThe range for ‘t’ (as in all cases throughout this document unless otherwise specified) is: temporal region. + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'part of continuant at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'part of continuant@en(x,y,t)'. + (forall (x y t) (if (exists (v) (and (continuantPartOfAt v x t) (continuantPartOfAt v y t))) (exists (z) (forall (u w) (iff (iff (continuantPartOfAt w u t) (and (continuantPartOfAt w x t) (continuantPartOfAt w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [122-001] + (forall (x t) (if (Continuant x) (continuantPartOfAt x x t))) // axiom label in BFO2 CLIF: [111-002] + (iff (ImmaterialEntity a) (and (IndependentContinuant a) (not (exists (b t) (and (MaterialEntity b) (continuantPartOfAt b a t)))))) // axiom label in BFO2 CLIF: [028-001] + BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + Mary’s arm continuant_part_of Mary in the time of her life prior to her operation + b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + continuant_part_of is antisymmetric. (axiom label in BFO2 Reference: [120-001]) + continuant_part_of is reflexive (every continuant entity is a continuant_part_of itself). (axiom label in BFO2 Reference: [111-002]) + continuant_part_of is transitive. (axiom label in BFO2 Reference: [110-001]) + continuant_part_of satisfies unique product. (axiom label in BFO2 Reference: [122-001]) + continuant_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [121-001]) + if b continuant_part_of c at t and b is an independent continuant, then b is located_in c at t. (axiom label in BFO2 Reference: [047-002]) + the Northern hemisphere of the planet Earth is a part of the planet Earth at all times at which the planet Earth exists. + + + + + b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + + + + + + (forall (x y t) (if (exists (v) (and (continuantPartOfAt v x t) (continuantPartOfAt v y t))) (exists (z) (forall (u w) (iff (iff (continuantPartOfAt w u t) (and (continuantPartOfAt w x t) (continuantPartOfAt w y t))) (= z u)))))) // axiom label in BFO2 CLIF: [122-001] + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y x t)) (= x y))) // axiom label in BFO2 CLIF: [120-001] + + + + + + (forall (x y z t) (if (and (continuantPartOfAt x y t) (continuantPartOfAt y z t)) (continuantPartOfAt x z t))) // axiom label in BFO2 CLIF: [110-001] + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (IndependentContinuant x)) (locatedInAt x y t))) // axiom label in BFO2 CLIF: [047-002] + + + + + + continuant_part_of is antisymmetric. (axiom label in BFO2 Reference: [120-001]) + + + + + + continuant_part_of satisfies unique product. (axiom label in BFO2 Reference: [122-001]) + + + + + + continuant_part_of is reflexive (every continuant entity is a continuant_part_of itself). (axiom label in BFO2 Reference: [111-002]) + + + + + + continuant_part_of satisfies weak supplementation. (axiom label in BFO2 Reference: [121-001]) + + + + + + (forall (x y t) (if (and (continuantPartOfAt x y t) (not (= x y))) (exists (z) (and (continuantPartOfAt z y t) (not (exists (w) (and (continuantPartOfAt w x t) (continuantPartOfAt w z t)))))))) // axiom label in BFO2 CLIF: [121-001] + + + + + + if b continuant_part_of c at t and b is an independent continuant, then b is located_in c at t. (axiom label in BFO2 Reference: [047-002]) + + + + + + BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + + + + + + (forall (x t) (if (Continuant x) (continuantPartOfAt x x t))) // axiom label in BFO2 CLIF: [111-002] + + + + + + + + + + + + continuant_part_of is transitive. (axiom label in BFO2 Reference: [110-001]) + + + + + + (iff (ImmaterialEntity a) (and (IndependentContinuant a) (not (exists (b t) (and (MaterialEntity b) (continuantPartOfAt b a t)))))) // axiom label in BFO2 CLIF: [028-001] + + + + + + + + + + + has continuant part at some time + c-has-part_st + [copied from inverse property 'part of continuant at some time'] BFO2 Reference: continuant + [copied from inverse property 'part of continuant at some time'] the Northern hemisphere of the planet Earth is a part of the planet Earth at all times at which the planet Earth exists. + [copied from inverse property 'part of continuant at some time'] b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + hasContinuantPartAt + [copied from inverse property 'part of continuant at some time'] Mary’s arm continuant_part_of Mary in the time of her life prior to her operation + [copied from inverse property 'part of continuant at some time'] BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'has continuant part at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'has continuant part@en'(x,y,t) + [copied from inverse property 'part of continuant at some time'] BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + [copied from inverse property 'part of continuant at some time'] BFO2 Reference: continuantThe range for ‘t’ (as in all cases throughout this document unless otherwise specified) is: temporal region. + (iff (hasContinuantPartAt a b t) (continuantPartOfAt b a t)) // axiom label in BFO2 CLIF: [006-001] + [copied from inverse property 'part of continuant at some time'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance level, relation. The BFO reading of the binary relation 'part of continuant at some time@en' is: exists t, exists_at(x,t) & exists_at(y,t) & 'part of continuant@en'(x,y,t) + b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + + + + + + (iff (hasContinuantPartAt a b t) (continuantPartOfAt b a t)) // axiom label in BFO2 CLIF: [006-001] + + + + + + + + + + + + b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + + + + + + + + + + + + + + + + + + has proper temporal part + has-t-ppart + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + history of + [copied from inverse property 'has history'] b has_history c iff c history_of b [XXX-001 + b history_of c if c is a material entity or site and b is a history that is the unique history of cAxiom: if b history_of c and b history_of d then c=d [XXX-001 + historyOf + history-of + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + has history + [copied from inverse property 'history of'] b history_of c if c is a material entity or site and b is a history that is the unique history of cAxiom: if b history_of c and b history_of d then c=d [XXX-001 + hasHistory + has-history + b has_history c iff c history_of b [XXX-001 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + part of continuant at all times that whole exists + This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'has continuant part at all times' + [copied from inverse property 'has continuant part at all times'] b has_continuant_part c at t = Def. c continuant_part_of b at t. (axiom label in BFO2 Reference: [006-001]) + forall(t) exists_at(y,t) -> exists_at(x,t) and 'part of continuant'(x,y,t) + [copied from inverse property 'has continuant part at all times'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'has continuant part at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'has continuant part@en(x,y,t)'. + c-part-of-object_at + + + + + + + + + + + + + + This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'has continuant part at all times' + + + + + + + + + + + + + + + + + + forall(t) exists_at(y,t) -> exists_at(x,t) and 'part of continuant'(x,y,t) + + + + + + + + + + + + + + + + + + has continuant part at all times that part exists + [copied from inverse property 'part of continuant at all times'] BFO2 Reference: continuantThe range for ‘t’ (as in all cases throughout this document unless otherwise specified) is: temporal region. + [copied from inverse property 'part of continuant at all times'] BFO2 Reference: continuant + [copied from inverse property 'part of continuant at all times'] BFO 2 Reference: Immaterial entities are in some cases continuant parts of their material hosts. Thus the hold of a ship, for example, is a part of the ship; it may itself have parts, which may have names (used for example by ship stow planners, customs inspectors, and the like). Immaterial entities under both 1. and 2. can be of zero, one, two or three dimensions. We define:a(immaterial entity)[Definition: a is an immaterial entity = Def. a is an independent continuant that has no material entities as parts. (axiom label in BFO2 Reference: [028-001]) + [copied from inverse property 'part of continuant at all times'] BFO 2 Reference: a (continuant or occurrent) part of itself. We appreciate that this is counterintuitive for some users, since it implies for example that President Obama is a part of himself. However it brings benefits in simplifying the logical formalism, and it captures an important feature of identity, namely that it is the limit case of mereological inclusion. + [copied from inverse property 'part of continuant at all times'] b continuant_part_of c at t =Def. b is a part of c at t & t is a time & b and c are continuants. (axiom label in BFO2 Reference: [002-001]) + [copied from inverse property 'part of continuant at all times'] Mary’s arm continuant_part_of Mary in the time of her life prior to her operation + This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'part of continuant at all times' + c-has-part-object_at + [copied from inverse property 'part of continuant at all times'] Alan Ruttenberg: This is a binary version of a ternary time-indexed, instance-level, relation. The BFO reading of the binary relation 'part of continuant at all times@en' is: forall(t) exists_at(x,t) -> exists_at(y,t) and 'part of continuant@en(x,y,t)'. + [copied from inverse property 'part of continuant at all times'] the Northern hemisphere of the planet Earth is a part of the planet Earth at all times at which the planet Earth exists. + forall(t) exists_at(y,t) -> exists_at(x,t) and 'has continuant part'(x,y,t) + + + + + + + + + + + + + + forall(t) exists_at(y,t) -> exists_at(x,t) and 'has continuant part'(x,y,t) + + + + + + + + + + + + This is a binary version of a ternary time-indexed, instance level, relation. Unlike the rest of the temporalized relations which temporally quantify over existence of the subject of the relation, this relation temporally quantifies over the existence of the object of the relation. The relation is provided tentatively, to assess whether the GO needs such a relation. It is inverse of 'part of continuant at all times' + + + + + + + + + + + + + + + + + + + + + + + + + + + + entity + + + + + + + An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001]) + Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf + Julius Caesar + entity + Entity + BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81 + Verdi’s Requiem + the Second World War + your body mass index + + + + per discussion with Barry Smith + Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf + + + + + + + + + + + + + + + + + + An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001]) + + + + + + + + + + + continuant + + + (forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] + (forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] + (forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] + Continuant + continuant + (forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] + A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002]) + BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240 + Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants + if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001]) + if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002]) + if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002]) + + + + (forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] + + + + + + if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002]) + + + + + + if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001]) + + + + + + Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants + + + + + + A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002]) + + + + + + (forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] + + + + + + if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002]) + + + + + + (forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] + + + + + + (forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] + + + + + + + + + + + occurrent + + Occurrent + (forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] + occurrent + (forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] + An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002]) + BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region + BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players. + Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001]) + Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process. + Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame. + b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001]) + + + + Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001]) + + + + + + An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002]) + + + + + + (forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] + + + + + + (forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] + + + + + + Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process. + per discussion with Barry Smith + + + + + + Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame. + + + + + + b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001]) + + + + + + + + + + + independent continuant + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] + (forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] + (iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] + For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001]) + For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002]) + ic + IndependentContinuant + a chair + a heart + a leg + a molecule + a spatial region + an atom + an orchestra. + an organism + b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) + the bottom right portion of a human torso + the interior of your mouth + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001]) + + + + + + (forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] + + + + + + (forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] + + + + + + b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) + + + + + + (iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] + + + + + + For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002]) + + + + + + + + + + + + + + + + + + + + + + spatial region + + + + + true + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + true + + + (forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] + SpatialRegion + (forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] + s-region + A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001]) + All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001]) + BFO 2 Reference: Spatial regions do not participate in processes. + Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional. + + + + + + + + + + + + + + + (forall (x) (if (SpatialRegion x) (Continuant x))) // axiom label in BFO2 CLIF: [035-001] + + + + + + + + + + + + + + + + + + + + + + + true + + + + + + + + + + + true + + + + + A spatial region is a continuant entity that is a continuant_part_of spaceR as defined relative to some frame R. (axiom label in BFO2 Reference: [035-001]) + + + + + + + + + + + + + + + + + (forall (x y t) (if (and (SpatialRegion x) (continuantPartOfAt y x t)) (SpatialRegion y))) // axiom label in BFO2 CLIF: [036-001] + + + + + + + + + + + + + + + + + All continuant parts of spatial regions are spatial regions. (axiom label in BFO2 Reference: [036-001]) + + + + + + Spatial region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the union of a spatial point and a spatial line that doesn't overlap the point, or two spatial lines that intersect at a single point. In both cases the resultant spatial region is neither 0-dimensional, 1-dimensional, 2-dimensional, or 3-dimensional. + per discussion with Barry Smith + + + + + + + + + + + temporal region + + + + + true + + + + + + + + + + + + + + + + + + true + + + (forall (x) (if (TemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [100-001] + t-region + (forall (x y) (if (and (TemporalRegion x) (occurrentPartOf y x)) (TemporalRegion y))) // axiom label in BFO2 CLIF: [101-001] + (forall (r) (if (TemporalRegion r) (occupiesTemporalRegion r r))) // axiom label in BFO2 CLIF: [119-002] + A temporal region is an occurrent entity that is part of time as defined relative to some reference frame. (axiom label in BFO2 Reference: [100-001]) + All parts of temporal regions are temporal regions. (axiom label in BFO2 Reference: [101-001]) + Temporal region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the mereological sum of a temporal instant and a temporal interval that doesn't overlap the instant. In this case the resultant temporal region is neither 0-dimensional nor 1-dimensional + TemporalRegion + Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002]) + + + + All parts of temporal regions are temporal regions. (axiom label in BFO2 Reference: [101-001]) + + + + + + (forall (x y) (if (and (TemporalRegion x) (occurrentPartOf y x)) (TemporalRegion y))) // axiom label in BFO2 CLIF: [101-001] + + + + + + Every temporal region t is such that t occupies_temporal_region t. (axiom label in BFO2 Reference: [119-002]) + + + + + + (forall (x) (if (TemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [100-001] + + + + + + + + + + + + + + + + + per discussion with Barry Smith + Temporal region doesn't have a closure axiom because the subclasses don't exhaust all possibilites. An example would be the mereological sum of a temporal instant and a temporal interval that doesn't overlap the instant. In this case the resultant temporal region is neither 0-dimensional nor 1-dimensional + + + + + + + + + + + + true + + + + + + + + + + + true + + + + + (forall (r) (if (TemporalRegion r) (occupiesTemporalRegion r r))) // axiom label in BFO2 CLIF: [119-002] + + + + + + + + + + + + + + + + + A temporal region is an occurrent entity that is part of time as defined relative to some reference frame. (axiom label in BFO2 Reference: [100-001]) + + + + + + + + + + + two-dimensional spatial region + + + + + + + + + + + + + + + + + + + + + + (forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001] + TwoDimensionalSpatialRegion + 2d-s-region + A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001]) + an infinitely thin plane in space. + the surface of a sphere-shaped part of space + + + + + + + + + + + + + + + + + + + A two-dimensional spatial region is a spatial region that is of two dimensions. (axiom label in BFO2 Reference: [039-001]) + + + + + + (forall (x) (if (TwoDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [039-001] + + + + + + + + + + + + + + + + + + + + + + + + + + spatiotemporal region + + + + + + + + + + + true + + + + + + + + + + + + + + + + + + true + + + + + + + + + (forall (r) (if (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion r r))) // axiom label in BFO2 CLIF: [107-002] + (forall (x) (if (SpatioTemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [095-001] + (forall (x) (if (SpatioTemporalRegion x) (exists (y) (and (TemporalRegion y) (temporallyProjectsOnto x y))))) // axiom label in BFO2 CLIF: [098-001] + (forall (x y) (if (and (SpatioTemporalRegion x) (occurrentPartOf y x)) (SpatioTemporalRegion y))) // axiom label in BFO2 CLIF: [096-001] + (forall (x t) (if (SpatioTemporalRegion x) (exists (y) (and (SpatialRegion y) (spatiallyProjectsOntoAt x y t))))) // axiom label in BFO2 CLIF: [099-001] + All parts of spatiotemporal regions are spatiotemporal regions. (axiom label in BFO2 Reference: [096-001]) + Each spatiotemporal region at any time t projects_onto some spatial region at t. (axiom label in BFO2 Reference: [099-001]) + Each spatiotemporal region projects_onto some temporal region. (axiom label in BFO2 Reference: [098-001]) + Every spatiotemporal region occupies_spatiotemporal_region itself. + Every spatiotemporal region s is such that s occupies_spatiotemporal_region s. (axiom label in BFO2 Reference: [107-002]) + SpatiotemporalRegion + st-region + A spatiotemporal region is an occurrent entity that is part of spacetime. (axiom label in BFO2 Reference: [095-001]) + the spatiotemporal region occupied by a human life + the spatiotemporal region occupied by a process of cellular meiosis. + the spatiotemporal region occupied by the development of a cancer tumor + + + + Each spatiotemporal region at any time t projects_onto some spatial region at t. (axiom label in BFO2 Reference: [099-001]) + + + + + + (forall (x y) (if (and (SpatioTemporalRegion x) (occurrentPartOf y x)) (SpatioTemporalRegion y))) // axiom label in BFO2 CLIF: [096-001] + + + + + + A spatiotemporal region is an occurrent entity that is part of spacetime. (axiom label in BFO2 Reference: [095-001]) + + + + + + + + + + + + true + + + + + Each spatiotemporal region projects_onto some temporal region. (axiom label in BFO2 Reference: [098-001]) + + + + + + All parts of spatiotemporal regions are spatiotemporal regions. (axiom label in BFO2 Reference: [096-001]) + + + + + + (forall (x t) (if (SpatioTemporalRegion x) (exists (y) (and (SpatialRegion y) (spatiallyProjectsOntoAt x y t))))) // axiom label in BFO2 CLIF: [099-001] + + + + + + + + + + + + + + + + + (forall (x) (if (SpatioTemporalRegion x) (exists (y) (and (TemporalRegion y) (temporallyProjectsOnto x y))))) // axiom label in BFO2 CLIF: [098-001] + + + + + + (forall (x) (if (SpatioTemporalRegion x) (Occurrent x))) // axiom label in BFO2 CLIF: [095-001] + + + + + + Every spatiotemporal region s is such that s occupies_spatiotemporal_region s. (axiom label in BFO2 Reference: [107-002]) + + + + + + + + + + + + + + + + + (forall (r) (if (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion r r))) // axiom label in BFO2 CLIF: [107-002] + + + + + + + + + + + + + + + + + + + + + + + true + + + + + + + + + + process + + + + + + + + + + + + + + + + + + + + + + + + + + + process + Process + (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] + BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war) + a process of cell-division, \ a beating of the heart + a process of meiosis + a process of sleeping + p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) + the course of a disease + the flight of a bird + the life of an organism + your process of aging. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] + + + + + + p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) + + + + + + + + + + + disposition + + + + + + + + + + + + + + + + + + + + + + + disposition + Disposition + (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] + (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] + BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type [89 + If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002]) + an atom of element X has the disposition to decay to an atom of element Y + b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002]) + certain people have a predisposition to colon cancer + children are innately disposed to categorize objects in certain ways. + the cell wall is disposed to filter chemicals in endocitosis and exocitosis + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002]) + + + + + + (forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] + + + + + + If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002]) + + + + + + (forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] + + + + + + + + + + + realizable entity + + + + + + + + + + + + + + + + + + + + + + + (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] + (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] + RealizableEntity + All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002]) + To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002]) + realizable + the disposition of this piece of metal to conduct electricity. + the disposition of your blood to coagulate + the function of your reproductive organs + the role of being a doctor + the role of this boundary to delineate where Utah and Colorado meet + + + + All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002]) + + + + + + + + + + + + + + + + + + + + + To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002]) + + + + + + + + + + + + + + + + + + + + + (forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] + + + + + + (forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] + + + + + + + + + + + zero-dimensional spatial region + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ZeroDimensionalSpatialRegion + (forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001] + 0d-s-region + A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001]) + + + + + + + + + + + + + + + + + + + + + + + + + + + A zero-dimensional spatial region is a point in space. (axiom label in BFO2 Reference: [037-001]) + + + + + + (forall (x) (if (ZeroDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [037-001] + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + quality + + + + + + + + + + + + + + + + + + + + + + (forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] + Quality + (forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] + quality + If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001]) + a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001]) + the ambient temperature of this portion of air + the color of a tomato + the length of the circumference of your waist + the mass of this piece of gold. + the shape of your nose + the shape of your nostril + + + + (forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001]) + + + + + + (forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] + + + + + + If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001]) + + + + + + + + + + + specifically dependent continuant + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] + sdc + (iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] + Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key + Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc. + SpecificallyDependentContinuant + b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n &gt; 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i &lt; j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004]) + b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003]) + of one-sided specifically dependent continuants: the mass of this tomato + of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates. + the disposition of this fish to decay + the function of this heart: to pump blood + the mutual dependence of proton donors and acceptors in chemical reactions [79 + the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction + the pink color of a medium rare piece of grilled filet mignon at its center + the role of being a doctor + the shape of this hole. + the smell of this portion of mozzarella + + + + (iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] + + + + + + + + + + + + + + + + + + + + + + + + + + + + b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n &gt; 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i &lt; j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004]) + + + + + + b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc. + per discussion with Barry Smith + + + + + + (iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] + + + + + + + + + + + role + + + + + + + + + + + + + + + + + + + + + + role + (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] + BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives. + John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married. + Role + b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001]) + the priest role + the role of a boundary to demarcate two neighboring administrative territories + the role of a building in serving as a military target + the role of a stone in marking a property boundary + the role of subject in a clinical trial + the student role + + + + + + + + + + + + + + + + + + + (forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] + + + + + + + + + + + + + + + + + + + + + b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001]) + + + + + + + + + + + fiat object + + (forall (x) (if (FiatObjectPart x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y) (and (Object y) (properContinuantPartOfAt x y t)))))))) // axiom label in BFO2 CLIF: [027-004] + BFO 2 Reference: Most examples of fiat object parts are associated with theoretically drawn divisions + FiatObjectPart + b is a fiat object part = Def. b is a material entity which is such that for all times t, if b exists at t then there is some object c such that b proper continuant_part of c at t and c is demarcated from the remainder of c by a two-dimensional continuant fiat boundary. (axiom label in BFO2 Reference: [027-004]) + fiat-object + or with divisions drawn by cognitive subjects for practical reasons, such as the division of a cake (before slicing) into (what will become) slices (and thus member parts of an object aggregate). However, this does not mean that fiat object parts are dependent for their existence on divisions or delineations effected by cognitive subjects. If, for example, it is correct to conceive geological layers of the Earth as fiat object parts of the Earth, then even though these layers were first delineated in recent times, still existed long before such delineation and what holds of these layers (for example that the oldest layers are also the lowest layers) did not begin to hold because of our acts of delineation.Treatment of material entity in BFOExamples viewed by some as problematic cases for the trichotomy of fiat object part, object, and object aggregate include: a mussel on (and attached to) a rock, a slime mold, a pizza, a cloud, a galaxy, a railway train with engine and multiple carriages, a clonal stand of quaking aspen, a bacterial community (biofilm), a broken femur. Note that, as Aristotle already clearly recognized, such problematic cases – which lie at or near the penumbra of instances defined by the categories in question – need not invalidate these categories. The existence of grey objects does not prove that there are not objects which are black and objects which are white; the existence of mules does not prove that there are not objects which are donkeys and objects which are horses. It does, however, show that the examples in question need to be addressed carefully in order to show how they can be fitted into the proposed scheme, for example by recognizing additional subdivisions [29 + the FMA:regional parts of an intact human body. + the Western hemisphere of the Earth + the division of the brain into regions + the division of the planet into hemispheres + the dorsal and ventral surfaces of the body + the upper and lower lobes of the left lung + + + + (forall (x) (if (FiatObjectPart x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y) (and (Object y) (properContinuantPartOfAt x y t)))))))) // axiom label in BFO2 CLIF: [027-004] + + + + + + b is a fiat object part = Def. b is a material entity which is such that for all times t, if b exists at t then there is some object c such that b proper continuant_part of c at t and c is demarcated from the remainder of c by a two-dimensional continuant fiat boundary. (axiom label in BFO2 Reference: [027-004]) + + + + + + + + + + + one-dimensional spatial region + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001] + OneDimensionalSpatialRegion + 1d-s-region + A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001]) + an edge of a cube-shaped portion of space. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A one-dimensional spatial region is a line or aggregate of lines stretching from one point in space to another. (axiom label in BFO2 Reference: [038-001]) + + + + + + (forall (x) (if (OneDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [038-001] + + + + + + + + + + + object aggregate + + object-aggregate + ObjectAggregate + ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158. + (forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004] + An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects + BFO 2 Reference: object aggregates may gain and lose parts while remaining numerically identical (one and the same individual) over time. This holds both for aggregates whose membership is determined naturally (the aggregate of cells in your body) and aggregates determined by fiat (a baseball team, a congressional committee). + a collection of cells in a blood biobank. + a swarm of bees is an aggregate of members who are linked together through natural bonds + a symphony orchestra + an organization is an aggregate whose member parts have roles of specific types (for example in a jazz band, a chess club, a football team) + b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004]) + defined by fiat: the aggregate of members of an organization + defined through physical attachment: the aggregate of atoms in a lump of granite + defined through physical containment: the aggregate of molecules of carbon dioxide in a sealed container + defined via attributive delimitations such as: the patients in this hospital + the aggregate of bearings in a constant velocity axle joint + the aggregate of blood cells in your body + the nitrogen atoms in the atmosphere + the restaurants in Palo Alto + your collection of Meissen ceramic plates. + + + + b is an object aggregate means: b is a material entity consisting exactly of a plurality of objects as member_parts at all times at which b exists. (axiom label in BFO2 Reference: [025-004]) + + + + + + An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects + + + + + + ISBN:978-3-938793-98-5pp124-158#Thomas Bittner and Barry Smith, 'A Theory of Granular Partitions', in K. Munn and B. Smith (eds.), Applied Ontology: An Introduction, Frankfurt/Lancaster: ontos, 2008, 125-158. + + + + + + An entity a is an object aggregate if and only if there is a mutually exhaustive and pairwise disjoint partition of a into objects + + + + + + (forall (x) (if (ObjectAggregate x) (and (MaterialEntity x) (forall (t) (if (existsAt x t) (exists (y z) (and (Object y) (Object z) (memberPartOfAt y x t) (memberPartOfAt z x t) (not (= y z)))))) (not (exists (w t_1) (and (memberPartOfAt w x t_1) (not (Object w)))))))) // axiom label in BFO2 CLIF: [025-004] + + + + + + + + + + + three-dimensional spatial region + + (forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001] + 3d-s-region + ThreeDimensionalSpatialRegion + A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001]) + a cube-shaped region of space + a sphere-shaped region of space, + + + + A three-dimensional spatial region is a spatial region that is of three dimensions. (axiom label in BFO2 Reference: [040-001]) + + + + + + (forall (x) (if (ThreeDimensionalSpatialRegion x) (SpatialRegion x))) // axiom label in BFO2 CLIF: [040-001] + + + + + + + + + + + site + + Site + (forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002] + a hole in the interior of a portion of cheese + a rabbit hole + an air traffic control region defined in the airspace above an airport + b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002]) + site + Manhattan Canyon) + the Grand Canyon + the Piazza San Marco + the cockpit of an aircraft + the hold of a ship + the interior of a kangaroo pouch + the interior of the trunk of your car + the interior of your bedroom + the interior of your office + the interior of your refrigerator + the lumen of your gut + your left nostril (a fiat part – the opening – of your left nasal cavity) + + + + b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002]) + + + + + + (forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002] + + + + + + + + + + + object + + Object + BFO 2 Reference: Each object is such that there are entities of which we can assert unproblematically that they lie in its interior, and other entities of which we can assert unproblematically that they lie in its exterior. This may not be so for entities lying at or near the boundary between the interior and exterior. This means that two objects – for example the two cells depicted in Figure 3 – may be such that there are material entities crossing their boundaries which belong determinately to neither cell. Something similar obtains in certain cases of conjoined twins (see below). + BFO 2 Reference: To say that b is causally unified means: b is a material entity which is such that its material parts are tied together in such a way that, in environments typical for entities of the type in question,if c, a continuant part of b that is in the interior of b at t, is larger than a certain threshold size (which will be determined differently from case to case, depending on factors such as porosity of external cover) and is moved in space to be at t at a location on the exterior of the spatial region that had been occupied by b at t, then either b’s other parts will be moved in coordinated fashion or b will be damaged (be affected, for example, by breakage or tearing) in the interval between t and t.causal changes in one part of b can have consequences for other parts of b without the mediation of any entity that lies on the exterior of b. Material entities with no proper material parts would satisfy these conditions trivially. Candidate examples of types of causal unity for material entities of more complex sorts are as follows (this is not intended to be an exhaustive list):CU1: Causal unity via physical coveringHere the parts in the interior of the unified entity are combined together causally through a common membrane or other physical covering\. The latter points outwards toward and may serve a protective function in relation to what lies on the exterior of the entity [13, 47 + object + BFO 2 Reference: BFO rests on the presupposition that at multiple micro-, meso- and macroscopic scales reality exhibits certain stable, spatially separated or separable material units, combined or combinable into aggregates of various sorts (for example organisms into what are called ‘populations’). Such units play a central role in almost all domains of natural science from particle physics to cosmology. Many scientific laws govern the units in question, employing general terms (such as ‘molecule’ or ‘planet’) referring to the types and subtypes of units, and also to the types and subtypes of the processes through which such units develop and interact. The division of reality into such natural units is at the heart of biological science, as also is the fact that these units may form higher-level units (as cells form multicellular organisms) and that they may also form aggregates of units, for example as cells form portions of tissue and organs form families, herds, breeds, species, and so on. At the same time, the division of certain portions of reality into engineered units (manufactured artifacts) is the basis of modern industrial technology, which rests on the distributed mass production of engineered parts through division of labor and on their assembly into larger, compound units such as cars and laptops. The division of portions of reality into units is one starting point for the phenomenon of counting. + BFO 2 Reference: an object is a maximal causally unified material entity + BFO 2 Reference: ‘objects’ are sometimes referred to as ‘grains’ [74 + atom + b is an object means: b is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. (axiom label in BFO2 Reference: [024-001]) + cell + cells and organisms + engineered artifacts + grain of sand + molecule + organelle + organism + planet + solid portions of matter + star + + + + b is an object means: b is a material entity which manifests causal unity of one or other of the types CUn listed above & is of a type (a material universal) instances of which are maximal relative to this criterion of causal unity. (axiom label in BFO2 Reference: [024-001]) + + + + + + + + + + + generically dependent continuant + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + gdc + GenericallyDependentContinuant + (iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] + The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity. + b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001]) + the pdf file on your laptop, the pdf file that is a copy thereof on my laptop + the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] + + + + + + b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001]) + + + + + + + + + + + + + + + + + + + + + + function + + function + (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] + A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001]) + BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc. + Function + the function of a hammer to drive in nails + the function of a heart pacemaker to regulate the beating of a heart through electricity + the function of amylase in saliva to break down starch into sugar + + + + (forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] + + + + + + A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001]) + + + + + + + + + + + process boundary + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001] + (forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002] + Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002]) + ProcessBoundary + p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001]) + p-boundary + the boundary between the 2nd and 3rd year of your life. + + + + Every process boundary occupies_temporal_region a zero-dimensional temporal region. (axiom label in BFO2 Reference: [085-002]) + + + + + + (forall (x) (if (ProcessBoundary x) (exists (y) (and (ZeroDimensionalTemporalRegion y) (occupiesTemporalRegion x y))))) // axiom label in BFO2 CLIF: [085-002] + + + + + + + + + + + + + + + + + + + + + + + + + + + p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (ProcessBoundary a) (exists (p) (and (Process p) (temporalPartOf a p) (not (exists (b) (properTemporalPartOf b a)))))) // axiom label in BFO2 CLIF: [084-001] + + + + + + + + + + + one-dimensional temporal region + + + (forall (x) (if (OneDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [103-001] + 1d-t-region + A one-dimensional temporal region is a temporal region that is extended. (axiom label in BFO2 Reference: [103-001]) + BFO 2 Reference: A temporal interval is a special kind of one-dimensional temporal region, namely one that is self-connected (is without gaps or breaks). + OneDimensionalTemporalRegion + the temporal region during which a process occurs. + + + + A one-dimensional temporal region is a temporal region that is extended. (axiom label in BFO2 Reference: [103-001]) + + + + + + (forall (x) (if (OneDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [103-001] + + + + + + + + + + + material entity + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + material + (forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] + MaterialEntity + (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] + (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] + A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002]) + BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60 + BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity. + BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here. + Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002]) + a flame + a forest fire + a human being + a hurricane + a photon + a puff of smoke + a sea wave + a tornado + an aggregate of human beings. + an energy wave + an epidemic + every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002]) + the undetached arm of a human being + + + + A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002]) + + + + + + Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] + + + + + + (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] + + + + + + + + + + + + + + + + + every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002]) + + + + + + (forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] + + + + + + + + + + + continuant fiat boundary + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ContinuantFiatBoundary + cf-boundary + (iff (ContinuantFiatBoundary a) (and (ImmaterialEntity a) (exists (b) (and (or (ZeroDimensionalSpatialRegion b) (OneDimensionalSpatialRegion b) (TwoDimensionalSpatialRegion b)) (forall (t) (locatedInAt a b t)))) (not (exists (c t) (and (SpatialRegion c) (continuantPartOfAt c a t)))))) // axiom label in BFO2 CLIF: [029-001] + BFO 2 Reference: In BFO 1.1 the assumption was made that the external surface of a material entity such as a cell could be treated as if it were a boundary in the mathematical sense. The new document propounds the view that when we talk about external surfaces of material objects in this way then we are talking about something fiat. To be dealt with in a future version: fiat boundaries at different levels of granularity.More generally, the focus in discussion of boundaries in BFO 2.0 is now on fiat boundaries, which means: boundaries for which there is no assumption that they coincide with physical discontinuities. The ontology of boundaries becomes more closely allied with the ontology of regions. + BFO 2 Reference: a continuant fiat boundary is a boundary of some material entity (for example: the plane separating the Northern and Southern hemispheres; the North Pole), or it is a boundary of some immaterial entity (for example of some portion of airspace). Three basic kinds of continuant fiat boundary can be distinguished (together with various combination kinds [29 + Continuant fiat boundary doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the mereological sum of two-dimensional continuant fiat boundary and a one dimensional continuant fiat boundary that doesn't overlap it. The situation is analogous to temporal and spatial regions. + Every continuant fiat boundary is located at some spatial region at every time at which it exists + b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001]) + + + + b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (ContinuantFiatBoundary a) (and (ImmaterialEntity a) (exists (b) (and (or (ZeroDimensionalSpatialRegion b) (OneDimensionalSpatialRegion b) (TwoDimensionalSpatialRegion b)) (forall (t) (locatedInAt a b t)))) (not (exists (c t) (and (SpatialRegion c) (continuantPartOfAt c a t)))))) // axiom label in BFO2 CLIF: [029-001] + + + + + + + + + + + + + + + + + Continuant fiat boundary doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the mereological sum of two-dimensional continuant fiat boundary and a one dimensional continuant fiat boundary that doesn't overlap it. The situation is analogous to temporal and spatial regions. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + immaterial entity + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ImmaterialEntity + immaterial + BFO 2 Reference: Immaterial entities are divided into two subgroups:boundaries and sites, which bound, or are demarcated in relation, to material entities, and which can thus change location, shape and size and as their material hosts move or change shape or size (for example: your nasal passage; the hold of a ship; the boundary of Wales (which moves with the rotation of the Earth) [38, 7, 10 + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + one-dimensional continuant fiat boundary + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + OneDimensionalContinuantFiatBoundary + (iff (OneDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (OneDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [032-001] + 1d-cf-boundary + The Equator + a one-dimensional continuant fiat boundary is a continuous fiat line whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [032-001]) + all geopolitical boundaries + all lines of latitude and longitude + the line separating the outer surface of the mucosa of the lower lip from the outer surface of the skin of the chin. + the median sulcus of your tongue + + + + + + + + + + + + + + + + + + + + + + + + + (iff (OneDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (OneDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [032-001] + + + + + + + + + + + + + + + + + + + + + + + + + + + a one-dimensional continuant fiat boundary is a continuous fiat line whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [032-001]) + + + + + + + + + + + process profile + + + + + + + + + + + + + + + (forall (x y) (if (processProfileOf x y) (and (properContinuantPartOf x y) (exists (z t) (and (properOccurrentPartOf z y) (TemporalRegion t) (occupiesSpatioTemporalRegion x t) (occupiesSpatioTemporalRegion y t) (occupiesSpatioTemporalRegion z t) (not (exists (w) (and (occurrentPartOf w x) (occurrentPartOf w z))))))))) // axiom label in BFO2 CLIF: [094-005] + ProcessProfile + process-profile + (iff (ProcessProfile a) (exists (b) (and (Process b) (processProfileOf a b)))) // axiom label in BFO2 CLIF: [093-002] + On a somewhat higher level of complexity are what we shall call rate process profiles, which are the targets of selective abstraction focused not on determinate quality magnitudes plotted over time, but rather on certain ratios between these magnitudes and elapsed times. A speed process profile, for example, is represented by a graph plotting against time the ratio of distance covered per unit of time. Since rates may change, and since such changes, too, may have rates of change, we have to deal here with a hierarchy of process profile universals at successive levels + One important sub-family of rate process profiles is illustrated by the beat or frequency profiles of cyclical processes, illustrated by the 60 beats per minute beating process of John’s heart, or the 120 beats per minute drumming process involved in one of John’s performances in a rock band, and so on. Each such process includes what we shall call a beat process profile instance as part, a subtype of rate process profile in which the salient ratio is not distance covered but rather number of beat cycles per unit of time. Each beat process profile instance instantiates the determinable universal beat process profile. But it also instantiates multiple more specialized universals at lower levels of generality, selected from rate process profilebeat process profileregular beat process profile3 bpm beat process profile4 bpm beat process profileirregular beat process profileincreasing beat process profileand so on.In the case of a regular beat process profile, a rate can be assigned in the simplest possible fashion by dividing the number of cycles by the length of the temporal region occupied by the beating process profile as a whole. Irregular process profiles of this sort, for example as identified in the clinic, or in the readings on an aircraft instrument panel, are often of diagnostic significance. + The simplest type of process profiles are what we shall call ‘quality process profiles’, which are the process profiles which serve as the foci of the sort of selective abstraction that is involved when measurements are made of changes in single qualities, as illustrated, for example, by process profiles of mass, temperature, aortic pressure, and so on. + b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002]) + b process_profile_of c holds when b proper_occurrent_part_of c& there is some proper_occurrent_part d of c which has no parts in common with b & is mutually dependent on b& is such that b, c and d occupy the same temporal region (axiom label in BFO2 Reference: [094-005]) + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (ProcessProfile a) (exists (b) (and (Process b) (processProfileOf a b)))) // axiom label in BFO2 CLIF: [093-002] + + + + + + b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002]) + + + + + + b process_profile_of c holds when b proper_occurrent_part_of c& there is some proper_occurrent_part d of c which has no parts in common with b & is mutually dependent on b& is such that b, c and d occupy the same temporal region (axiom label in BFO2 Reference: [094-005]) + + + + + + (forall (x y) (if (processProfileOf x y) (and (properContinuantPartOf x y) (exists (z t) (and (properOccurrentPartOf z y) (TemporalRegion t) (occupiesSpatioTemporalRegion x t) (occupiesSpatioTemporalRegion y t) (occupiesSpatioTemporalRegion z t) (not (exists (w) (and (occurrentPartOf w x) (occurrentPartOf w z))))))))) // axiom label in BFO2 CLIF: [094-005] + + + + + + + + + + + relational quality + + + + + + + + 2 + + + + + + (iff (RelationalQuality a) (exists (b c t) (and (IndependentContinuant b) (IndependentContinuant c) (qualityOfAt a b t) (qualityOfAt a c t)))) // axiom label in BFO2 CLIF: [057-001] + John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married. + RelationalQuality + a marriage bond, an instance of love, an obligation between one person and another. + r-quality + b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001]) + + + + b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001]) + + + + + + (iff (RelationalQuality a) (exists (b c t) (and (IndependentContinuant b) (IndependentContinuant c) (qualityOfAt a b t) (qualityOfAt a c t)))) // axiom label in BFO2 CLIF: [057-001] + + + + + + + + + + + + + + + + 2 + + + + + + + + + + + + two-dimensional continuant fiat boundary + + 2d-cf-boundary + TwoDimensionalContinuantFiatBoundary + (iff (TwoDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (TwoDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [033-001] + a two-dimensional continuant fiat boundary (surface) is a self-connected fiat surface whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [033-001]) + + + + a two-dimensional continuant fiat boundary (surface) is a self-connected fiat surface whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [033-001]) + + + + + + (iff (TwoDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (TwoDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [033-001] + + + + + + + + + + + zero-dimensional continuant fiat boundary + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + (iff (ZeroDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (ZeroDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [031-001] + 0d-cf-boundary + ZeroDimensionalContinuantFiatBoundary + a zero-dimensional continuant fiat boundary is a fiat point whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [031-001]) + the geographic North Pole + the point of origin of some spatial coordinate system. + the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet + zero dimension continuant fiat boundaries are not spatial points. Considering the example 'the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet' : There are many frames in which that point is zooming through many points in space. Whereas, no matter what the frame, the quadripoint is always in the same relation to the boundaries of Colorado, Utah, New Mexico, and Arizona. + + + + requested by Melanie Courtot + zero dimension continuant fiat boundaries are not spatial points. Considering the example 'the quadripoint where the boundaries of Colorado, Utah, New Mexico, and Arizona meet' : There are many frames in which that point is zooming through many points in space. Whereas, no matter what the frame, the quadripoint is always in the same relation to the boundaries of Colorado, Utah, New Mexico, and Arizona. + + + + + + + (iff (ZeroDimensionalContinuantFiatBoundary a) (and (ContinuantFiatBoundary a) (exists (b) (and (ZeroDimensionalSpatialRegion b) (forall (t) (locatedInAt a b t)))))) // axiom label in BFO2 CLIF: [031-001] + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + a zero-dimensional continuant fiat boundary is a fiat point whose location is defined in relation to some material entity. (axiom label in BFO2 Reference: [031-001]) + + + + + + + + + + + zero-dimensional temporal region + + + + + + + + 0d-t-region + (forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001] + A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001]) + ZeroDimensionalTemporalRegion + a temporal region that is occupied by a process boundary + right now + temporal instant. + the moment at which a child is born + the moment at which a finger is detached in an industrial accident + the moment of death. + + + + + + + + + + + + + + + A zero-dimensional temporal region is a temporal region that is without extent. (axiom label in BFO2 Reference: [102-001]) + + + + + + (forall (x) (if (ZeroDimensionalTemporalRegion x) (TemporalRegion x))) // axiom label in BFO2 CLIF: [102-001] + + + + + + + + + + + history + + + + + + + + + + + + + + + + + + A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001]) + History + history + + + + A history is a process that is the sum of the totality of processes taking place in the spatiotemporal region occupied by a material entity or site, including processes on the surface of the entity or within the cavities to which it serves as host. (axiom label in BFO2 Reference: [138-001]) + + + + + + + + + + + Person:Alan Ruttenberg + + + To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003]) + To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003]) + + + To say that each spatiotemporal region s temporally_projects_onto some temporal region t is to say that t is the temporal extension of s. (axiom label in BFO2 Reference: [080-003]) + + + + + + To say that spatiotemporal region s spatially_projects_onto spatial region r at t is to say that r is the spatial extent of s at t. (axiom label in BFO2 Reference: [081-003]) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3 b/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3 index aca9a4d8..2f03a9fe 100644 --- a/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3 +++ b/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3 @@ -7,10 +7,25 @@ @prefix datagetter: . @prefix vitro: . @prefix role: . - +@prefix local: . +@prefix vivo: . + @base . +local:authorInAuthorshipContext a :ConfigContext ; + :hasConfiguration local:authorInAuthorshipConfig ; + :configContextFor vivo:relatedBy ; + :qualifiedBy vivo:Authorship . + +local:authorInAuthorshipConfig a :ObjectPropertyDisplayConfig ; + :listViewConfigFile "listViewConfig-authorInAuthorship.xml"^^xsd:string ; + :displayName "selected publications" ; + vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ; + vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ; + vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator"^^xsd:string ; + :propertyGroup . + a :ConfigContext ; :hasConfiguration ; :configContextFor ; @@ -18,9 +33,7 @@ a :ObjectPropertyDisplayConfig ; - :hasListView [ - :listViewConfigFile "listViewConfig-hasRole.xml"^^ - ] ; + :listViewConfigFile "listViewConfig-hasRole.xml"^^xsd:string ; :displayName "has service provider role" ; vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ; vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ; diff --git a/productMods/WEB-INF/ontologies/update/askUpdated.sparql b/productMods/WEB-INF/ontologies/update/askUpdated.sparql index a9a17942..b11b0b85 100644 --- a/productMods/WEB-INF/ontologies/update/askUpdated.sparql +++ b/productMods/WEB-INF/ontologies/update/askUpdated.sparql @@ -6,6 +6,6 @@ ASK { graph { vitro:updatedToOntology ?u . ?u vitro:updatedOntology . - ?u vitro:toOntologyVersion "1.5" . + ?u vitro:toOntologyVersion "1.6" . } -} \ No newline at end of file +} diff --git a/productMods/WEB-INF/ontologies/update/diff.tab.txt b/productMods/WEB-INF/ontologies/update/diff.tab.txt index e69de29b..009c167b 100644 --- a/productMods/WEB-INF/ontologies/update/diff.tab.txt +++ b/productMods/WEB-INF/ontologies/update/diff.tab.txt @@ -0,0 +1 @@ +http://vivoweb.org/ontology/core#administeredBy complex construct with grant administrator role http://vivoweb.org/ontology/core#administers complex construct with grant administrator role http://vivoweb.org/ontology/core#advisee CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#adviseeIn CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#advisingContributionTo realizedIn? Come back to this. http://vivoweb.org/ontology/core#advisor CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#advisorIn CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#affiliatedOrganization construct Relationship node? http://vivoweb.org/ontology/core#assignedBy patent - come back to this http://vivoweb.org/ontology/core#assignee patent - come back to this http://vivoweb.org/ontology/core#associatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#associatedWithPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#attendeeRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#authorInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardConferred http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#awardConferredBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#awardOrHonor http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardOrHonorFor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#awardsGrant http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#clinicalRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#co-PrincipalInvestigatorRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#contributingAdvising come back to this http://vivoweb.org/ontology/core#contributingRole come back to this http://vivoweb.org/ontology/core#courseOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#credentialOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#currentMemberOf http://vivoweb.org/ontology/core#memberOf Yes z http://vivoweb.org/ontology/core#currentlyHeadOf CC or delete? http://vivoweb.org/ontology/core#currentlyHeadedBy CC or delete? http://vivoweb.org/ontology/core#degreeCandidacy revisit http://vivoweb.org/ontology/core#degreeEarned http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#degreeOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#degreeOutcomeOf http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#distributes revisit (distributor role?) http://vivoweb.org/ontology/core#distributesFundingFrom revisit http://vivoweb.org/ontology/core#domesticGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#domesticGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#editor CC editorship http://vivoweb.org/ontology/core#editorOf CC editorship http://vivoweb.org/ontology/core#editorRoleOf http://purl.obolibrary.org/obo/BFO_0000052 z http://vivoweb.org/ontology/core#educationalTraining http://vivoweb.org/ontology/core#relatedBy z http://vivoweb.org/ontology/core#educationalTrainingOf http://vivoweb.org/ontology/core#relates z http://vivoweb.org/ontology/core#eligibleFor revisit http://vivoweb.org/ontology/core#equipmentInFacility http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#eventWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#geographicLocationOf http://purl.obolibrary.org/obo/RO_0001015 Yes """location of""" http://vivoweb.org/ontology/core#geographicallyContains http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#geographicallyWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#governingAuthorityFor revisit http://vivoweb.org/ontology/core#grantAwardedBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#hasAttendeeRole http://purl.obolibrary.org/obo/BFO_0000053 Yes """bearer of""" http://vivoweb.org/ontology/core#hasClinicalRole http://purl.obolibrary.org/obo/BFO_0000053 Yes """bearer of""" http://vivoweb.org/ontology/core#hasCo-PrincipalInvestigatorRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasCollaborator http://vivoweb.org/ontology/core#relatedBy Yes CC construct Relationship http://vivoweb.org/ontology/core#hasCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#hasCurrentMember revisit - construct relationship? http://vivoweb.org/ontology/core#hasEditorRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasGeographicLocation http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#hasGoverningAuthority revisit http://vivoweb.org/ontology/core#hasInvestigatorRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasLeaderRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasMemberRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasOrganizerRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasOutreachProviderRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasPart http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasPredecessorOrganization revisit http://vivoweb.org/ontology/core#hasPresenterRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasPrincipalInvestigatorRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasResearcherRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasReviewerRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasRoom http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#hasServiceProviderRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#hasSubOrganization http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasSuccessorOrganization revisit http://vivoweb.org/ontology/core#hasTeacherRole http://purl.obolibrary.org/obo/BFO_0000053 Yes z http://vivoweb.org/ontology/core#inEventSeries http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#includesEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#informationProduct revisit http://vivoweb.org/ontology/core#informationProductOf revisit http://vivoweb.org/ontology/core#informationResourceInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#internationalGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#internationalGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#investigatorRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes """inheres in""" http://vivoweb.org/ontology/core#issuanceOfCredential http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#issuedCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#leaderRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#linkedAuthor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#linkedInformationResource http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#locationOfEquipment http://purl.obolibrary.org/obo/RO_0001015 Yes z http://vivoweb.org/ontology/core#mailingAddress VCard http://vivoweb.org/ontology/core#mailingAddressFor VCard http://vivoweb.org/ontology/core#memberRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#offersCourse http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#offersDegree http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#organizationForPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#organizationForTraining http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#organizerRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#outcome revisit: RO? http://vivoweb.org/ontology/core#outcomeOf revisit: RO? http://vivoweb.org/ontology/core#outreachProviderRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#partOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#personInPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#positionForPerson http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#positionInOrganization http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#presenterRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#principalInvestigatorRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#providesService http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#realizedRole http://purl.obolibrary.org/obo/BFO_0000055 Yes """realizes""" http://vivoweb.org/ontology/core#receipt http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#receiptOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#relatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#researcherRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#reviewerRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#roleContributesTo http://vivoweb.org/ontology/core#relatedBy Yes may not apply in all situations http://vivoweb.org/ontology/core#roleIn http://purl.obolibrary.org/obo/BFO_0000054 Yes """realized in"" (or delete, since there should be subs?)" http://vivoweb.org/ontology/core#roleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#roleRealizedIn http://purl.obolibrary.org/obo/BFO_0000054 Yes z http://vivoweb.org/ontology/core#roomWithinBuilding http://purl.obolibrary.org/obo/RO_0001025 Yes double check this http://vivoweb.org/ontology/core#seriesForEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#serviceProvidedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#serviceProviderRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#subGrantOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#subOrganizationWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#teacherRoleOf http://purl.obolibrary.org/obo/BFO_0000052 Yes z http://vivoweb.org/ontology/core#trainingAtOrganization http://vivoweb.org/ontology/core#relates Yes double check this http://vivoweb.org/ontology/core#webpage VCard? http://vivoweb.org/ontology/core#webpageOf VCard \ No newline at end of file diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/geopolitical.tbox.ver1.1-11-18-11.owl b/productMods/WEB-INF/ontologies/update/oldVersion/geopolitical.tbox.ver1.1-11-18-11.owl new file mode 100644 index 00000000..37834ae3 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/geopolitical.tbox.ver1.1-11-18-11.owl @@ -0,0 +1,1868 @@ + + + prior version : " http://aims.fao.org/aos/geopolitical_v10.owl" + The use of the information presented on the FAO Country Profiles portal is governed by FAO's copyright reservation. Any queries regarding the content, sources or use, please contact FAO-country-profiles@fao.org or visit http://www.fao.org/countryprofiles. + FAO DISCLAIMER: Information on the FAO Country Profiles portal is provided as and when available. The designations employed and the presentation of information do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal status of any country, territory, city or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. FAO makes every effort to ensure, but does not guarantee, the accuracy or completeness of and declines responsibility for any loss, damage, liability or expense suffered which is claimed to result from its use. + Version 1.1 of the ontology includes a structured description of sources (source creator, source identifier by language, and last updated date on source) . + + FAO's geopolitical ontology version 1.1 was populated with FAO, UN and internationally recognized data sources. + 2011-08-11 + version 1.1 + + + + + + + + + + + + + 1 + + + + + + + + + + + + + + + + + + 1 + + + + + + UN Cartographic Section, Department of Field Support + http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + 2010-05-01 + UN Cartographic Section, Department of Field Support http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + + + + + + United Nations Map Library + http://www.un.org/depts/dhl/maplib/countinfo.htm + 2010-09-08 + United Nations Map Library http://www.un.org/depts/dhl/maplib/countinfo.htm + + + + + + United Nations statistics department + http://unstats.un.org/unsd/methods/m49/m49regnf.htm + http://unstats.un.org/unsd/methods/m49/m49regin.htm + 2010-04-01 + United Nations statistics department http://unstats.un.org/unsd/methods/m49/m49regin.htm + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + 1 + + + + + + + + + + + + + + + + + + + + + + + + + + + United Nations Statistics Division + + United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm + http://unstats.un.org/unsd/methods/m49/m49chang.htm + 2010-04-15 + http://unstats.un.org/unsd/methods/m49/m49chgef.htm + + + + + + + + + + + + + + + + + + United Nations cartographic maps + http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + 2010-05-01 + United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + + + + + + + + + http://unstats.un.org/unsd/methods/m49/m49chgef.htm + United Nations Statistics Division + 2010-04-15 + + United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm + http://unstats.un.org/unsd/methods/m49/m49chang.htm + + + + + + + + United Nations cartographic maps + http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + 2010-05-01 + United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf + + + + + + + + + + + + + http://www.fao.org/termportal/contr/ar/ + + + + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + 2010-06-24 + FAO terminology + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/zh/ + + + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/en/ + FAO terminology + http://www.fao.org/termportal/contr/zh/ + 2010-06-24 + FAO terminology http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/en/ + + + + + + + + + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/en/ + FAO terminology + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + + + + http://www.fao.org/termportal/contr/zh/ + 2010-06-24 + http://www.fao.org/termportal/contr/es/ + + + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/es/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/en/ + + + + FAO terminology + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/fr/ + 2010-06-24 + + + + + + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + FAOSTAT + FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor + 2010-07-21 + Agricultural area, this category is the sum of areas under a) arable land - land under temporary agricultural crops (multiple-cropped areas are counted only once), temporary meadows for mowing or pasture, land under market and kitchen gardens and land temporarily fallow (less than five years). The abandoned land resulting from shifting cultivation is not included in this category. Data for “Arable land” are not meant to indicate the amount of land that is potentially cultivable; (b) permanent crops - land cultivated with long-term crops which do not have to be replanted for several years (such as cocoa and coffee); land under trees and shrubs producing flowers, such as roses and jasmine; and nurseries (except those for forest trees, which should be classified under "forest"); and (c) permanent meadows and pastures - land used permanently (five years or more) to grow herbaceous forage crops, either cultivated or growing wild (wild prairie or grazing land). Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor + + + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + FAO terminology + 2010-06-24 + http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/contr/es/ + + + 2010-06-24 + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology http://www.fao.org/termportal/en/ + + + + FAO terminology + + + + + + + + + 2010-06-24 + http://www.fao.org/termportal/contr/ar/ + FAO terminology + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + + + + + + FAO terminology + 2010-06-24 + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + + + + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/fr/ + + + http://www.fao.org/termportal/en/ + FAO terminology + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/es/ + 2010-06-24 + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + FAO terminology http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/contr/zh/ + + + + + + + + + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + + + + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/en/ + FAO terminology + 2010-06-24 + http://www.fao.org/termportal/contr/ar/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + + + + + + + + + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + FAO terminology + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/ar/ + + + + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/en/ + 2010-06-24 + + + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + + + + http://www.fao.org/termportal/contr/ar/ + + FAO terminology + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + 2010-06-24 + http://www.fao.org/termportal/en/ + + + + + + + + + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + + + + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology + 2010-06-24 + + + http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=en#ancor + 2009-09-21 + The total population usually refers to the present-in-area (de facto) population which includes all persons physically present within the present geographical boundaries of countries at the mid-point of the reference period. http://faostat.fao.org/site/375/default.aspx + http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=es#ancor + FAOSTAT + + + + http://faostat.fao.org/DesktopDefault.aspx?PageID=550&lang=fr#ancor + FAOSTAT http://faostat.fao.org/site/550/default.aspx + + + + + + + + http://www.fao.org/termportal/contr/es/ + FAO terminology + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/en/ + FAO terminology http://www.fao.org/termportal/en/ + + + + 2010-06-24 + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + + + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/fr/ + FAO terminology http://www.fao.org/termportal/en/ + 2010-06-24 + + + + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/en/ + FAO terminology + http://www.fao.org/termportal/en/ + + + 2010-06-24 + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/zh/ + + + + FAO terminology + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + + + + + + + + + + + + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/en/ + FAO terminology + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/es/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + 2010-06-24 + http://www.fao.org/termportal/contr/ar/ + + + + + + + + + + + + + + + FAO terminology + + + + 2010-06-24 + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/zh/ + + + + + + + + + + + + + http://data.albankaldawli.org/indicator/NY.GDP.MKTP.CD + World Bank http://data.worldbank.org/indicator/NY.GDP.MKTP.CD + http://donnees.banquemondiale.org/indicateur/NY.GDP.MKTP.CD + GDP at purchaser's prices is the sum of gross value added by all resident producers in the economy plus any product taxes and minus any subsidies not included in the value of the products. It is calculated without making deductions for depreciation of fabricated assets or for depletion and degradation of natural resources. Data are in current U.S. dollars. Dollar figures for GDP are converted from domestic currencies using single year official exchange rates. For a few countries where the official exchange rate does not reflect the rate effectively applied to actual foreign exchange transactions, an alternative conversion factor is used. Source: World Bank national accounts data, and OECD National Accounts data files. http://data.worldbank.org/indicator/NY.GDP.MKTP.CD + 2010-12-16 + World Bank + + ttp://datos.bancomundial.org/indicador/NY.GDP.MKTP.CD + http://data.worldbank.org/indicator/NY.GDP.MKTP.CD + http://data.worldbank.org/indicator/NY.GDP.MKTP.CD + + + + + + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology + http://www.fao.org/termportal/en/ + FAO terminology http://www.fao.org/termportal/en/ + 2010-06-24 + + + FAOSTAT + 2011-07-21 + FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor + Land area is the total area of the country excluding area under inland water bodies. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1 000 hectares. http://faostat.fao.org/site/375/default.aspx + + + + + + + http://www.fao.org/termportal/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology + 2010-06-24 + + + FAO terminology http://www.fao.org/termportal/en/ + 2010-06-24 + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/fr/ + + FAO terminology + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + + + + + + + + + + + + + + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + 2010-06-24 + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + + + + + + + + + + + + + + + + + + + + + + 2010-06-24 + FAO terminology + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/contr/es/ + + + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + + + + FAO terminology + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + 2010-06-24 + + + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology + 2010-06-24 + + + + http://www.fao.org/termportal/contr/es/ + + + + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/en/ + FAO terminology + 2010-06-24 + http://www.fao.org/termportal/contr/fr/ + + + + + + United Nations Statistics Division + http://unstats.un.org/unsd/methods/m49/m49alpha.htm + http://unstats.un.org/unsd/methods/m49/m49alphaf.htm + 2010-04-01 + United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm + + + http://www.fao.org/termportal/contr/fr/ + FAO terminology + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/contr/en/ + 2010-06-24 + http://www.fao.org/termportal/contr/zh/ + + + The value of the datatype property *validSince* associated to a particular area (territory or group) indicates the area's first year of validity. The geopolitical ontology traces back historic changes only until 1985, therefore, if an area has a validSince = 1985, this indicates that the area is/was valid since 1985 or before. + + + + + + + + + + + + + + + + + + DBpedia + http://dbpedia.org/About + 2010-04-28 + DBpedia http://dbpedia.org/About + + + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=fr#ancor + 2011-07-21 + Country area, area of the country including area under inland water bodies, but excluding offshore territorial waters. Possible variations in the data may be due to updating and revisions of the country data and not necessarily to any change of area. Data are expressed in 1000 hectares. http://faostat.fao.org/site/375/default.aspx + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=es#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + + FAOSTAT http://faostat.fao.org/DesktopDefault.aspx?PageID=377&lang=en#ancor + FAOSTAT + + + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology + 2010-06-24 + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/en/ + + http://www.fao.org/termportal/contr/fr/ + + + http://www.fao.org/termportal/contr/zh/ + FAO terminology + http://www.fao.org/termportal/en/ + + + + http://www.fao.org/termportal/contr/ar/ + 2010-06-24 + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/es/ + + + + + + FAOSTAT + http://faostat.fao.org + http://faostat.fao.org/default.aspx?lang=es + http://faostat.fao.org/default.aspx?lang=fr + FAOSTAT http://faostat.fao.org + + + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/fr/ + FAO terminology + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + + 2010-06-24 + + + + + + + + + + + + + AGROVOC + http://aims.fao.org/fr/website/Search-AGROVOC/sub + AGROVOC http://aims.fao.org/website/Search-AGROVOC/sub + http://aims.fao.org/zh-hans/website/Search-AGROVOC/sub + http://aims.fao.org/ar/website/Search-AGROVOC/sub + http://aims.fao.org/es/website/Search-AGROVOC/sub + http://aims.fao.org/website/Search-AGROVOC/sub + + + + + + + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + 2010-06-24 + http://www.fao.org/termportal/contr/fr/ + FAO terminology + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/zh/ + + + + + + + + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/es/ + + + + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/fr/ + FAO terminology + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/en/ + 2010-06-24 + + + 2010-06-24 + http://www.fao.org/termportal/contr/fr/ + http://www.fao.org/termportal/contr/en/ + + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology + http://www.fao.org/termportal/contr/ar/ + + + + + + + + + + + + Global Administrative Unit Layers + http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691 + 2008-12-10 + Global Administrative Unit Layers http://www.fao.org/geonetwork/srv/en/metadata.show?id=12691 + + + 2010-06-24 + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + FAO terminology + + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/es/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/fr/ + + + + + + + + ISO 3166-1 + http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm + ISO 3166-1 http://www.iso.org/iso/country_codes/iso_3166_code_lists.htm + + + http://www.fao.org/termportal/en/ + 2010-06-24 + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/zh/ + FAO terminology http://www.fao.org/termportal/en/ + FAO terminology + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/contr/fr/ + + + + FAO terminology + http://www.fao.org/termportal/contr/ar/ + + http://www.fao.org/termportal/contr/en/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/es/ + http://www.fao.org/termportal/contr/fr/ + 2010-06-24 + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + + + http://hdrstats.undp.org/en/indicators/49806.html + http://hdrstats.undp.org/en/indicators/49806.html + http://hdrstats.undp.org/fr/indicateurs/49806.html + 2010-11-04 + UNDP - HDRO + + UNDP - HDRO http://hdrstats.undp.org/en/indicators/49806.html + composite index measuring average achievement in three basic dimensions of human development—a long and healthy life, knowledge and a decent standard of living. Source: Calculated based on data from UNDESA (2009d), Barro and Lee (2010), UNESCO Institute for Statistics (2010b), World Bank (2010b) and IMF(2010a) . http://hdrstats.undp.org/en/indicators/49806.html + http://hdrstats.undp.org/es/indicadores/49806.html + + + + + + + + + + + + + + http://www.fao.org/termportal/contr/es/ + FAO terminology http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/ar/ + http://www.fao.org/termportal/contr/en/ + http://www.fao.org/termportal/en/ + http://www.fao.org/termportal/contr/zh/ + http://www.fao.org/termportal/contr/fr/ + FAO terminology + 2010-06-24 + + + + + United Nations Statistics Division + http://unstats.un.org/unsd/methods/m49/m49alpha.htm + http://unstats.un.org/unsd/methods/m49/m49alphaf.htm + 2010-04-01 + United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49alpha.htm + + + + + + + The value of the datatype property *validUntil* associated to a particular area (territory or group) indicates the area's last year of validity. In case the area is currently valid, this value is set by default to 9999. + + + + + + + + + + + + + + + + + + + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/isDefinedBy-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/isDefinedBy-1.5.owl new file mode 100644 index 00000000..df14801a --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/isDefinedBy-1.5.owl @@ -0,0 +1,25 @@ + + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/scires-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/scires-1.5.owl new file mode 100644 index 00000000..1d58e2f2 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/scires-1.5.owl @@ -0,0 +1,208 @@ + + + + ero + + + A service that produces a physical object or data, such as a custom micro-array chip, a made to order antibody, or a behavioral dataset + + A service that produces a physical object or data. + + + eagle-i: Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances. +NOTE: For now we are not addressing whether this is a subclass of foaf:Agent + Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances. + + + In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects + Phase 1 Clinical Trial + + + + + + OBI: An organism is material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. +NOTE that we are not addressing for now the issue of whether a foaf:Person is a subclass of obi:Organism + An organism is a material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. + + + + + + A clinical trial is a research study using human volunteers to answer questions about treatments for diseases and conditions. Clinical trials are conducted in phases. The trials at each phase have a different purpose and help scientists answer different questions. + A research study using human volunteers to answer specifc health-related questions. + + + eagle-i: Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, part of or derived an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype. + An individual animal, part of or derived an animal, plant, part of a plant, or microorganism. + A portion or quantity of a biological material for use in testing, examination, or study. + + + + In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. + + Phase 3 Clinical Trial + + + + + + + + + + + An implement used to facilitate work, especially precision work. + An implement used to facilitate work, especially precision work. + + + + + A protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process. + A plan specification that allows different domain experts to reliably and independently reproduce a process. + + + + Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies. + Phase 0 Clinical Trial + + + Phase 4 Clinical Trial + In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use. + + + + + A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service. + A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provisi + + + The comment in ero says "Maybe sameAs Investigation but is subject of funding" + + A project whose goal is the increase of knowledge, the primary aim being a greater knowledge or understanding of the subject under study. + + + eagle-i: Research project that uses or collects measurements or assessments about humans. + Research project that uses or collects measurements or assessments about humans. + + + + Phase 2 Clinical Trial + + In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety. + + + A service in which a service consumer provides some material or data as input which a service provider stores and returns as output. + A service in which a service consumer provides some material or data as input which a service provider stores and returns as output. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. + + + + + number of human participants in the study (trial). + + + + ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials + NCT00000419 + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-bibo-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-bibo-1.5.owl new file mode 100644 index 00000000..33ccab46 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-bibo-1.5.owl @@ -0,0 +1,1417 @@ + + + Audiovisual recording in film format + + + + stable + http://purl.org/ontology/bibo/ + aka movie. + + + A main division of a book + A chapter of a book. + + + + unstable + http://purl.org/ontology/bibo/ + + + A passage selected from a larger work. + + + + A passage selected from a larger work + stable + http://purl.org/ontology/bibo/ + Short Definition from the bibo ontology + + + stable + http://purl.org/ontology/bibo/ + A group of related documents issued at regular intervals. + + + + + + + + + + + + + + + + + + + + + + + + + + + + A work consisting of texts of rules and regulations related to statutes issued by executive or administrative agencies + stable + http://purl.org/ontology/bibo/ + + A collection of statutes. + Short Definition from OCLC Input Standards, EntW + Code of Federal Regulations + + + Notes or annotations about a resource + + + + Notes or annotations about a resource. + Short Definition from bibo ontology + stable + http://purl.org/ontology/bibo/ + + + stable + + + + A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc. + http://purl.org/ontology/bibo/ + A document describing an account or statement describing in detail an event, situation, or the like, usually as the result of observation, inquiry, etc.. + + + + + + + + + Medical Subject Heading (MeSH) definition of Technical Report: Work consisting of a formal report giving details of the investigation and results of a medical or other scientific problem. When issued by a government agency or comparable official body, its contents may be classified, unclassified, or declassified with regard to security clearance. This publication type may also cover a scientific paper or article that records the current state or current position of scientific research and development. If so labeled by the editor or publisher, this publication type may be properly used for journal articles. + + + http://purl.org/ontology/bibo/ + A compilation of documents published from an event, such as a conference. + unstable + Short Definition copied from bibo ontology + A compilation of documents published from an event, such as a conference + + + + + + A document describing a standard + stable + A specification giving a precise statement of a process or a service requirement, often sanctioned by a nation or industry + http://purl.org/ontology/bibo/ + + + + Short Definition from OCLC Input Standards, EntW + + + http://purl.org/ontology/bibo/ + a document that states some contractual relationship or grants some right + + + + A legal document; for example, a court decision, a brief, and so forth. + stable + + + + + + + + + + + Short Definition from the bibo ontology + A distinct part of a larger document or collected document + + + + http://purl.org/ontology/bibo/ + a distinct part of a larger document or collected document. + unstable + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Short Definition copied from bibo ontology + + + + + + + + + + + + + + + + + + http://purl.org/ontology/bibo/ + + + + + + + + + A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers. + A written or printed work of fiction or nonfiction, usually on sheets of paper fastened or bound together within covers + stable + + + + + + + + + + + A collection of Documents or Collections + Hill Ornithology Collection; Wiley Interscience Online Books Biochemisty Collection + Collection of information resources that have a unified identity. Archives, museums and libraries often acquire collections on specific subjects and from distinguished authors or researchers. Also includes collections of resources bundled into a license. + http://purl.org/ontology/bibo/ + Collection of information resources that have a unified identity + + stable + + + http://purl.org/ontology/bibo/ + stable + The status of the publication of a document. + The status of a document with respect to its publication. The statuses are represented as individuals of this class. Use the "show all individuals of this class" button on the class control panel to see the currently defined statuses. + submitted; accepted; in-press; published; invited; refereed. + The status of a document with respect to its publication. + + + Something carried out, acted or rendered. + unstable + + A public performance. + http://purl.org/ontology/bibo/ + + + A legal document proposing or enacting a law or a group of laws. + http://purl.org/ontology/bibo/ + + Enactments of legislative bodies, published in either statute or code form + unstable + From OCLC Input Standards, EntW + + + A written or printed communication addressed to a person or organization and usually transmitted by mail + A written or printed communication addressed to a person or organization and usually transmitted by mail + + + + + + A web page is an online document available (at least initially) on the world wide web. A web page is written first and foremost to appear on the web, as distinct from other online resources such as books, manuscripts or audio documents which use the web primarily as a distribution mechanism alongside other more traditional methods such as print. + unstable + One section of a website that appears at a unique address within the parent site's address or URL on the World Wide Web + http://purl.org/ontology/bibo/ + + + + + + stable + http://purl.org/ontology/bibo/ + Recorded audio in any format + An audio document; aka record. + + + + + + + + + phonograph record; tape; CD; DVD; DAT + + + + + + Short Definition from the bibo ontology + + + + + + + + + unstable + A section of a book + + + + + + + + + + http://purl.org/ontology/bibo/ + + + + + + + + + A section of a book. + + + http://purl.org/ontology/bibo/ + unstable + The written determination of a case, motion or claim by a court or tribunal + A document containing an authoritative determination (as a decree or judgment) made after consideration of facts or law. + + + + + + + A group of webpages available within a specific parent address or URL on the World Wide Web + unstable + A group of Webpages accessible on the Web. + Facebook; VIVOweb.org; Flickr + + + + + + + http://purl.org/ontology/bibo/ + + + An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit. + http://purl.org/ontology/bibo/ + Definiton from Bibo here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + An instance or a session in which testimony and arguments are presented, esp. before an official, as a judge in a lawsuit. + + stable + + + unstable + A document stating the facts and points of law of a client's case + + + + http://purl.org/ontology/bibo/ + A written argument submitted to a court. + + + http://purl.org/ontology/bibo/ + A document that simultaneously contains other documents. + Short Definition is the Medical Subject Heading (MeSH) definition + + + + + + + stable + Work consisting of collections of previously published works + + + + + + stable + + + + An audio-visual document; film, video, and so forth. + + + + + + + + + Audiovisual recording in any format + film; video; Blu-ray + http://purl.org/ontology/bibo/ + + + stable + + A conversation between two or more people where questions are asked by the interviewer to obtain information from the interviewee. + http://purl.org/ontology/bibo/ + A formalized discussion between two or more people. + radio or newspaper interview + + + http://purl.org/ontology/bibo/ + stable + something that is printed or published and distributed, esp. a given number of a periodical + Short Definition from the bibo ontology + something that is printed or published and distributed, esp. a given number of a periodical + + + + + + + + + + A patent is an exclusive right granted for an invention, which is a product or a process that provides, in general, a new way of doing something, or offers a new technical solution to a problem. In order to be patentable, the invention must fulfill certain conditions. (http://www.wipo.int/patentscope/en/) + + + + A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years. + stable + http://purl.org/ontology/bibo/ + (from BIBO) A document describing the exclusive right granted by a government to an inventor to manufacture, use, or sell an invention for a certain number of years + + + + + + + + + Short Definition from the bibo ontology + http://purl.org/ontology/bibo/ + An excerpted collection of words. + stable + + An excerpted collection of words + + + Contains news articles, opinions, features, advertising, and is usually issued daily or weekly + A periodical of documents, usually issued daily or weekly, containing current news, editorials, feature articles, and usually advertising. + USA Today + stable + + http://purl.org/ontology/bibo/ + + + + + + + + + Journal of Information Science; IEEE Intelligent System; Scientometrics + Contains original scholarly research or review articles by experts in the field + A periodical of scholarly journal Articles. + stable + Articles usually contain abstracts and bibliographies. Includes peer-reviewed, non-peer-reviewed, and open access journals. Journals are usually indexed in the major academic databases such as PubMed and Web of Science. + + http://purl.org/ontology/bibo/ + + + + A document accompanying a legal case. + Official court papers for a case + http://purl.org/ontology/bibo/ + unstable + + + stable + Collection of legal cases + A collection of legal cases. + + Supreme Court Reporter + http://purl.org/ontology/bibo/ + + + + + + A personal communication manifested in some document. + A personal communication manifested in some document. + + + Contains articles of current events or general interest, geared to the reading public as being informative or recreational + + A periodical of magazine Articles. A magazine is a publication that is issued periodically, usually bound in a paper cover, and typically contains essays, stories, poems, etc., by many writers, and often photographs and drawings, frequently specializing in a particular subject or area, as hobbies, news, or sports. + stable + Abstracts and bibliographies are usually not included in magazines. + New Yorker + http://purl.org/ontology/bibo/ + + + http://purl.org/ontology/bibo/ + The academic degree of a Thesis. + The academic degree of a Thesis + Doctor of Philosophy (Ph.D.) + Different from general academic degree, thesis degree is achieved through one's completed thesis. Thesis is a document submitted in support of candidature for a degree or professional qualification presenting the author's research and findings(http://en.wikipedia.org/wiki/Thesis_or_dissertation). + + stable + + + + + + photograph; diagram + stable + http://purl.org/ontology/bibo/ + A document that presents visual or diagrammatic information. + + + + A visual representation such as a photograph or graph + + + Methods in Molecular Biology + + + + + + + + + + http://purl.org/ontology/bibo/ + A thematic collection of documents, usually books, issued at regular or irregular intervals + A loose, thematic, collection of Documents, often Books. + + + + + + + + + stable + + + Works created to satisfy the requirements for an academic certification or degree; also called dissertation + http://purl.org/ontology/bibo/ + + + + + + + stable + A document created to summarize research findings associated with the completion of an academic degree. + Short Definition from OCLC Input Standards, EntW + + + + + + + + + + + + A bounded physical representation of a body of information designed with the capacity (and usually intent) to communicate + + + + + + + + + + Short Definition from the bibo ontology + + + + + + + stable + http://purl.org/ontology/bibo/ + + + + + + + + + + + + + + + A document (noun) is a bounded physical representation of body of information designed with the capacity (and usually intent) to communicate. A document may manifest symbolic, diagrammatic or sensory-representational information. + + + + + + + + + A presentation of a series of slides, usually presented in front of an audience with written text and images. + http://purl.org/ontology/bibo/ + stable + Short Definition from the bibo ontology + + A presentation of a series of slides, usually presented in front of an audience with written text and images + + + stable + Draft legislation presented for discussion to a legal body. + + Draft legislation presented for discussion to a legal body + http://purl.org/ontology/bibo/ + Short Definition from the bibo ontology + + + A specific academic journal article + Written by scholars for other scholars, typically published in an academic journal with an abstract and bibliography + http://purl.org/ontology/bibo/ + + + + + + + + + + + + + + + A scholarly academic article, typically published in a journal. + + + + stable + + + unstable + http://purl.org/ontology/bibo/ + A document that presents authoritative reference information, such as a dictionary or encylopedia . + A document that presents authoritative reference information, such as a dictionary or encylopedia + + Short Definition from the bibo ontology + + + SDB User Manual + http://purl.org/ontology/bibo/ + A book of instructions or guide to a specific topic + unstable + A small reference book, especially one giving instructions. + + + + Bibo Definition: A seminar, discussion group, or the like, that emphasizes exchange of ideas and the demonstration and application of techniques, skills, etc. + http://purl.org/ontology/bibo/ + + stable + A seminar, discussion group, or the like, that emphasizes zxchange of ideas and the demonstration and application of techniques, skills, etc. + + + + + + + + + An edited book. + + + + + + + + + http://purl.org/ontology/bibo/ + Best American Science Writing 2009 + + stable + An edited collection of stand-alone articles published as a book + + + + + + + + + http://purl.org/ontology/bibo/ + The Short Definition is how the bibo ontology defines Map. It has been extended to include more broader concept of map which includes science maps, social network maps. + A graphical depiction of geographic features. + A graphical depiction of geographic features, scientific discipline, scientific data analytical results + + unstable + + + + + + + + + + + + + + + + + + + + http://purl.org/ontology/bibo/ + A specific journal article + + + + + + + + + A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a periodical or book + Short Definition modified from the bibo ontology. + A written composition in prose, usually nonfiction, on a specific topic, forming an independent part of a book or other publication, as a newspaper or magazine. + stable + + + Short Definition from the bibo ontology + http://purl.org/ontology/bibo/ + + A slide in a slideshow + A slide in a slideshow + unstable + + + A meeting for consultation or discussion. + + core:Seminar and bibo:Conference are very similar. + 2010 International Congress on Autoimmunity; American Libraries Association 2009 + A meeting for consultation or discussion. + + + + + + + http://purl.org/ontology/bibo/ + stable + + + http://purl.org/ontology/bibo/ + Works prepared by hand including handwritten or typescript drafts of pre-publication papers or works not otherwise reproduced in multiple copies + An unpublished Document, which may also be submitted to a publisher for publication. + Short Definition is the Medical Subject Heading (MeSH) definition + stable + + + + A bill enacted into law. + + A bill enacted into law + stable + http://purl.org/ontology/bibo/ + Short Definition from bibo ontology + + + http://purl.org/ontology/bibo/ + The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term "unstable". The bibo editorial note is: "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen." + unstable + We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen. + + The thesis degree. + + + + Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product. + + + + http://purl.org/ontology/bibo/ + + Relates an event to associated documents; for example, conference to a paper. + unstable + + + + + stable + http://purl.org/ontology/bibo/ + Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . + A Film director. + + + + + A legal decision that affirms a ruling. + The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + + + http://purl.org/ontology/bibo/ + + + + + + stable + http://purl.org/ontology/bibo/ + + + + + + + + + + + + + + Critical or explanatory note for a Document. + The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. + stable + http://purl.org/ontology/bibo/ + + + + An entity responsible for issuing often informally published documents such as press releases, reports, etc. This term is classified as unstable by bibo. + An entity responsible for issuing often informally published documents such as press releases, reports, etc. + http://purl.org/ontology/bibo/ + + unstable + + + + unstable + + + + http://purl.org/ontology/bibo/ + Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product. + + Relates a document to an event; for example, a paper to a conference. + + + + Definition from bibo: A person having managerial and sometimes policy-making responsibility for the editorial part of a publishing firm or of a newspaper, magazine, or other publication. + + + + + A legal decision that reverses a ruling. + http://purl.org/ontology/bibo/ + The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + + + + + + + + + An agent that receives a communication document. + stable + http://purl.org/ontology/bibo/ + + + + + + + + + + + + http://purl.org/ontology/bibo/ + stable + An agent that is interviewed by another agent. + + + http://purl.org/ontology/bibo/ + + Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property "unstable". + + A court associated with a legal document; for example, that which issues a decision. + unstable + + + + + + + + + + + + + + Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . + + + + An agent that interview another agent. + + stable + http://purl.org/ontology/bibo/ + + + + A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.). + + Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + + + http://purl.org/ontology/bibo/ + + + + http://purl.org/ontology/bibo/ + Relates a translated document to the original document. + stable + + Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . + + + + paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this. + + + + unstable + + + http://purl.org/ontology/bibo/ + The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable. + Relates a document to some transcribed original. + + + + The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used. + + + + + stable + An identifier of serials, still in use by libraries, but replaced by ISSN for any new work + http://purl.org/ontology/bibo/ + CODEN became particularly common in the scientific community as a citation system for periodicals cited in technical- as well in chemistry-related publications and as a search tool in many bibliographic catalogues. +Definition and description came from Wikipedia here: http://en.wikipedia.org/wiki/CODEN + + + + + + + + + + A summary of the resource. + stable + + http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + http://purl.org/dc/terms/ + + + stable + The prefix of a name + + http://purl.org/ontology/bibo/ + Mr; Ms; Mrs + + http://dictionary.reference.com/browse/prefix + + + Definition source: http://en.wikipedia.org/wiki/European_Article_Numbering-Uniform_Code_Council. +The Uniform Code Council (UCC) was the Numbering Organization in the USA to administer and manage the EAN.UCC System. In 2005 the UCC changed its name to GS1 US. + http://purl.org/ontology/bibo/ + stable + European Article Number/Uniform Commercier Code 13 + + + + + + Source: http://en.wikipedia.org/wiki/Library_of_Congress_Control_Number. + Library of Congress Control Number + + + + stable + http://purl.org/ontology/bibo/ + + + + + + stable + http://info-uri.info/registry/OAIHandler?verb=GetRecord&metadataPrefix=reg&identifier=info:oclcnum/. + + +bibo has the domain of this property set to the union of Collection and Document. + OCLC Identifier + http://purl.org/ontology/bibo/ + + + + + + + + + An section number + http://purl.org/ontology/bibo/ + Di Rado, Alicia. 1995. Trekking through college: Classes explore +modern society using the world of Star trek. Los Angeles Times, March +15, sec. A, p. 3. + unstable + + + Serial Item and Contribution Identifier + + + + stable + A sub property of identifier (http://en.wikipedia.org/wiki/SICI). + http://purl.org/ontology/bibo/ + + + Global Trade Item Number 14 + http://en.wikipedia.org/wiki/Global_Trade_Item_Number. + http://purl.org/ontology/bibo/ + stable + + + + + + http://purl.org/ontology/bibo/ + + + + stable + Digital Object Identifier + + + Bibo has the domain of bibo:issue as the class Issue, but an example on their site uses it with Article, referring to the issue number "4" + + + + + + + + Starting page number within a continuous page range. + + + + + http://purl.org/ontology/bibo/ + stable + + + http://purl.org/ontology/bibo/ + The idea here is that while dcterms:description may involve length descriptions, this for short (two or three word) descriptions that could go in a bibliographic entry. + unstable + A short description of the resource. + + + + http://purl.org/ontology/bibo/ + + stable + definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + A description (often numeric) that locates an item within a containing document or collection. + + + + International Standard Serial Number + stable + http://purl.org/ontology/bibo/ + source: http://en.wikipedia.org/wiki/Issn + + + An chapter number + + Title of the chapter (this individual) currently should be entered in the individual name (rdfs:label). Title of the book belongs on a separate Book individual related to the chapter via the core:partOf property (or its child property bibo:reproducedIn). The core:title field is deprecated and should no longer be used as of version 1.1 -- we will want to map rdfs:label to dc:title for query or linked data requests in the future + http://purl.org/ontology/bibo/ + + unstable + + + http://purl.org/ontology/bibo/ + + stable + source for public description: http://en.wikipedia.org/wiki/Universal_Product_Code. + Universal Product Code + + + stable + http://purl.org/ontology/bibo/ + eissn stands for Electronic International Standard Serial Number. source: http://www.definition-of.com/EISSN + The electronic ISSN number of a periodical. + + + + http://purl.org/ontology/bibo/ + The PubMed ID (PMID) identifies a citation record (rather than full-text) in the PubMed database. It is not evidence of compliance with the NIH Public Access Policy, because it does not identify a full-text submission of any kind. + stable + PubMed Identifier + + + + + Definition from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + + + + + + stable + http://purl.org/ontology/bibo/ + The name defining a special edition of a document. Normally its a literal value composed of a version number and words. + + + + + http://en.wikipedia.org/wiki/Isbn. + + + + Ending page number within a continuous page range. + stable + + + http://purl.org/ontology/bibo/ + + + + source: http://en.wikipedia.org/wiki/Isbn. + + + + + + Jr.; III;; M.D. + + stable + The suffix of a name + http://purl.org/ontology/bibo/ + + + 020530902X + + stable + Amazon standard identification number. Source: http://en.wikipedia.org/wiki/Amazon_Standard_Identification_Number. + Amazon Standard Identification Number + http://purl.org/ontology/bibo/ + + + + Definition from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-c4o-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-c4o-1.5.owl new file mode 100644 index 00000000..bb6f0493 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-c4o-1.5.owl @@ -0,0 +1,51 @@ + + + A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus. + + + The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date. + + + + A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date. + + + + A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date. + + + + + + An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date. + + + + + The date on which the global citation count of the cited entity was recorded from a named bibliographic information source. + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-core-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-core-1.5.owl new file mode 100644 index 00000000..70cbb052 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-core-1.5.owl @@ -0,0 +1,3492 @@ + + + + + + + + + + + 0.7 + + + + + + 0.1 + + + Legal (department within a company); Use for any non-academic department + Definition modified from the definition here: http://dictionary.reference.com/browse/department. It is difficult to tell the difference between and department and a division. + + + + + + + + + + + A distinct, usually ongoing and specialized unit within a large organization. + + + + + + 2 + + + + + + + Independent organizations formally working together toward a common goal, under an expressed agreement + Committee on Institutional Cooperation (CIC); The Five Colleges of Ohio + + + + + + + + + + + Enter room number of name. + 100 Caldwell Hall; 114 Martha Van Rensselaer (Rushmore Conference Room) + + + + Room that provides a particular service or is used for a particular activity. + + + + + + + + + + + There could be many subclasses such as thesis committee or tenure committee, but these may typically be differentiated via the moniker unless distinct properties become important. + Curriculum Steering Committee; PhD Advisory Committee + A group of people organized for a specific purpose (e.g., a reporting or advisory role), often with a charge and for a specific duration. + + + + An institution for instruction in a particular skill or field. + School of Architecture; School of Music + + Definition take from here: http://dictionary.reference.com/browse/school. + + + + + + Role of a person to direct a project or activity being supported by an Agreement (for example, a grant), and who is accountable to the grantee for the proper conduct of the project or activity. Also known as Program Director or Project Director. + + + + + + An explicit individual academic term, quarter, or semester rather than the generic fall, spring or summer semester. + + + + + + F1000, is a place where faculty go to critique papers published in PubMed. Any given record in F1000 might have anywhere from one to dozens of reviews. + + + + + + Short Definition take from http://en.wiktionary.org/wiki/continent. + The seven commonly recognized continents are Africa; Antarctica; Asia; Australia; Europe; North America; South America + A large contiguous landmass that is at least partially surrounded by water, together with any islands on its continental shelf. + + + A specific blog posting + + + + + + + + + + + + An online article or commentary appearing on a blog + + + + + + A lab providing services such as training, protocols, or access to instruments or software + + + A qualitative descriptive research study of individuals or a group + + A form of qualitative descriptive research that is used to study individuals, a small group of participants, or a group as a whole. Medical usage (from MeSH): clinical presentations that may be followed by evaluative studies that eventually lead to a diagnosis. + + + An organized series of a meeting for an exchange of ideas, typically put on by a department or center. + + + + Applied Microeconomics Seminars; Future of Rural New York Seminar Series + For individual seminars, use seminar instead. core:ConferenceSeries and core:SeminarSeries are very similar. + + + Definition obtained here: http://answers.ask.com/Business/Finance/what_is_a_private_company. Examples of private companies found here: http://www.forbes.com/2008/11/03/largest-private-companies-biz-privates08-cx_sr_1103private_land.html + + + + Publix Super Markets; Ernst & Young; PricewaterhouseCoopers + A private company is one that is privately-owned, and thus, is not publicly-traded in the stock market. Members of the general public cannot purchase stock in a private company unless that company chooses to go public and become a public company. + + + + An article reviewing one or more other information resources (a book, one or more other articles, movies, etc) + + + + + + + + + + + + + 1 + + + + + + An academic degree at any level, both as reported by individuals for employment and as offered by academic degree programs. + + + 1 + + + + + + This list may have multiple abbreviations for some degrees. + B.A. Bachelor of Arts + + + US postal address follow the format street, apt or office number (optional), city, state, and zipcode. + + + 1 + + + + + + 1320 East 10th Street, Wells Library 021 Bloomington, IN 47405 + + + + + + 1 + + + + + + Formal address in US postal address system. + + + 1 + + + + + + + + A broad-ranging leader concept, from leading a small temporary committee to head of a large international organization. + + + + A leadership role + + + + An institution of higher education and research, which grants academic degrees in a variety of subjects, and provides both undergraduate education and postgraduate education. + University of Florida; Washington University in St. Louis + + + + + + + + + Definition taken from: http://en.wikipedia.org/wiki/University + + + Use only if no specific subclasses of core:Student describe the person. + + A person who is enrolled in an educational institution. + + + One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US. + + + + Source of the Short Definition: http://www.thefreedictionary.com/state. + Minnesota; Michigan; Indiana; New York; Quebec; Manitoba; Ontario + + + + + + A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper. + A role that encompasses both ongoing reviewer responsibility for a bibo:Collection, such as a Journal or Series, and also a review performed for a bibo:Document, such as a book, academic article or conference paper. + + + It's anticipated that the subclasses will be used when classifying items. And, all locations can be viewable via this class. + Use subclasses of core:Location when classsifying items. + Top level of all location classes. + + + + + + A role in an Agreement (for example, a grant) as a named investigator or key personnel. + + + College of Arts & Sciences; Ivy Tech Community College + + + + + + + + + + A primary academic unit within a University or a free-standing higher education organization without graduate degree programs. + + + + + + see also core:Certificate + An issued certificate + + + + A document created as a basis for discussion or a very early draft of a formal paper + + + + + + + + + + + + A retired librarian who has retained their rank, title and privileges. + + + + + + A role of observing or treating patients + + + from Wikipedia: "A company is a form of business organization. It is an association or collection of individual real persons and/or other companies ... This collection, group or association of persons can be made to exist in law and then a company is itself considered a "legal person". The name company arose because, at least originally, it represented or was owned by more than one real or legal person." + a legally-recognized business organization + + + + a specific period or duration, defined by (optional) start and end date/times. + + + A position classified as professional, staff, support, or any other non-academic role + + + + Staff, support, and other non-academic positions. + + + + + + + + + + + + + + + + + + + Accounting & Research Services Assistant; Director of Information Technology + + + + + + A granted license, which gives a 'permission to practice.' Such licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:License. + A granted license, which gives a 'permission to practice.' + + + + + + A retired professor who has retained their rank, title and privileges. + + + + is a generic term for a process of self-regulation by a profession or a process of evaluation involving qualified individuals within the relevant field. Peer review methods are employed to maintain standards, improve performance and provide credibility. In academia the term is often used to denote a prepublication review of academic papers; reviewing an academic paper is often called refereeing. +Contents +[hide] + + A role of peer reviewing + + + A location having coordinates in geographic space. + + + + Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. This definition was originally in core:Geographic Location. I simply copied the definition from there. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion. + Use subclasses of core:Geographic Region subclasses instead of this class if possible. + + + + + + An area of land distinguished by its political autonomy. Politically independent territories. + Source of the Short Definition: http://www.thefreedictionary.com/country. This is also the same as geopolitical.owl:self_governing. + Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America + + + + + + + + Alachua County Extension Office + + A unit devoted primarily to extension activities, whether for outreach or research. + + + For individual, separate conferences, use conference instead. core:ConferenceSeries and core:SeminarSeries are very similar. + An organized series of a meeting for consultation or discussion. + + + + + + + Text of a speech written in preparation for delivery of the speech. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A negotiated arrangement between two or more parties regarding a course of action + + + + A person registered in an undergraduate program leading to a bachelor's degree or an undergraduate diploma or certificate. + + + A government agency is a permanent or semi-permanent organization in the machinery of government that is responsible for the oversight and administration of specific functions. + Definition take from: http://en.wikipedia.org/wiki/Government_agency. + + United States Library of Congress + + + Definition was take from here: http://dictionary.reference.com/browse/museum + A building or place where works of art, scientific specimens, or other objects of permanent value are kept and displayed. + The Getty Museum + + + + Those positions are held by people who do academic work but do not have faculty positions in universities or institutes. + + + + + + + + + + + + + + + + + + + + + + Researcher; Academic Extension Associate; Postdoctoral Associate + A position involving academic work but without faculty status + + + + National Institute of Health (NIH) + + + + + + + + + + + A defined class of organizations that fund Grants. + + + + Written script for a film production, including dialogue and descriptions of gestures, actions, shooting directions + + + Licenses are usually issued in order to regulate some activity that is deemed to be dangerous or a threat to the person or the public or which involves a high level of specialized skill. See also core:Licensure. + Official or legal permission to do something + + + + + + A laboratory that provides services + Ideally a defined class -- a Laboratory the provides some Service via the property + + + + + + + + + + + + + + Elsevier; Harper & Row; Indiana University Press + + A person or company whose business is the publishing of books, periodicals, engravings, computer software, etc. + Definition found here: http://dictionary.reference.com/browse/publisher + + + Use subclasses of core:Facility subclasses instead of this class if possible + Something designed, built, installed, etc., to serve a specific function or activity affording a convenience or service. + + + + Distinct from the organization that runs it; e.g., a laboratory may be an organization but may be run by another organization and only consist of facilities housing equipment or services. Can be a building or place that provides a particular service or is used for a particular activity. Use the specific Building or Room whenever possible. Short definition from http://dictionary.reference.com/browse/facility. + + + The example is one outreach role required by US space agency NASA, which is related with one project in NASA. Name of the outreach role should be put here. + Communicating Astronomy to the Public + An outreach or community service role directed outside a person's primary profession and institution + + + + + + + + + Are we assuming that a PresenterRole is in a Presentation? Or could you have a PresenterRole in, say, a committee? + + + + + + + + + A role of presenting information + + + + + + A position designated as primary by the organization where it is held. + A position designated as primary by the organization or group where it is held. This designation may be applied to zero or more of an agent's positions and may be asserted in conjunction with other subclasses of position. + + + + A gathering of people for a defined purpose, not necessarily public or announced + + + + An article of opinion, typically published in a newspaper. For academics, most commonly Op Ed pieces + + + The most general classification of an information resource + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + The Ford Foundation + + An institution financed by a donation or legacy to aid research, education, the arts, etc. + Definition take from: http://dictionary.reference.com/browse/foundation. + + + Regularly updated online journal or newsletter by one or more writers, called bloggers, containing articles and commentary of interest to the blogger + + Blog is short for weblog. + Library of Congress Blog + + + + Definition take from here: http://en.wikipedia.org/wiki/Student_society + A student organization is an organization, operated by students at a university, whose membership normally consists only of students. + Dancin' Gators + + + An Award or Honor + An Award or Honor + + + + + + + + + Wiley Prize in Biomedical Sciences + + + + + + + + + + + + + + + + + + + + + A regularly offered service in support of an academic, research, or administrative function (not personal or professional service by an individual) + UITS service + + + + + + + + + + + UITS service is the information technology services provided by Indiana University. SC. + + + + + + A role of organizing + + + + + + Either city or town - a thickly populated area having fixed boundaries and certain local powers of government. + + + Any region that goes beyond national boundaries and does not fit into any subclass of core:TransnationalRegion. + Not sure how to access the "Editor's Comments". But as North America is a continent, it would be placed directly into the continent subclass and viewable through this class along with any other subclass entities. + sub-Saharan Africa, North America + None as yet. + + + + + + 1 + + + + + + + + + + + + + + http://info.slis.indiana.edu/~katy/ + Uniform Resource Locator (URL) specifies where an identified resource is available and the mechanism for retrieving it. + The full URL. + + + The grounds of a school, college, university, or hospital. Or, a large, usually suburban, landscaped business or industrial site. + Definition taken from dictionary.com (http://dictionary.reference.com/browse/campus). + + + + Cornell Ithaca; Cornell Geneva; Cornell New York City; Cornell Qatar + + + An academic administrative position (associate dean, etc.) as distinct from a professional administrative position (non-academic) + Associate Dean + + + + + + + + + + + + + + + + + + + That is a position held by an academic faculty member who works for administration. + + + + + + + The showing of an object or a collection of objects, in an organized manner. + + + A physical object provided for specific purpose, task or occupation. + + + + + + + + + A network server is one example. Medical schools and research laboratories can list professional equipment, such as microscopes. + server; Bruker Vector-33 FT-IR + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Only use if no specific subclasses of core:EventSeries desribe the activity. + Two or more events that occur at different times and are connected to each other. + A generic class which may include a conference series, a course section, a seminar series, or a workshop series. When possible, use one of these more specific classes. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Martha Van Rensselaer Hall (VR); Caldwell Hall (CD); University Auditorium + Building that provides a particular service or is used for a particular activity. + Enter building name. If the building's name is a number (as in many governmental organizations such as national laboratories and military bases), then enter it. Do not confuse with the number that appears in a postal address. + + + The largest administrative division of most states or provinces. + Alachua; Baker; Bradford; Kenora; Ottawa; Waterloo + Short Definition modified from the one found here: http://www.thefreedictionary.com/county. + + + + + + + + + + + + + + + + + + + + + + + + + + + + An employment activity, whether compensated or not. Short definition comes from http://en.wikipedia.org/wiki/Position, and has been modified. + Particular position in an organization, commonly identified by job title, and normally associated with a job description that details the tasks and responsibilities that go with the position. + Director of Admissions and Placement; Associate University Librarian + + + + + + + + + + + + + + An advisory relationship in which a professor advises an undergraduate student. + + + + + + A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment. + A document confirming certain characteristics of a person or organization, usually provided by some form of external review, education, or assessment. + + + Endodontics (department within a College of Dentistry); English (department within a College of Liberal Arts) + + + + + + + + + + + + + + + + + + + + A distinct, usually specialized educational unit within an educational organization. + + + + + + An advisory relationship in which the advisee is a Postdoc or Fellow. + + + + A person holding a position that is not considered to be an academic appointment. + + + + Encompasses talk, speech, lecture, slide lecture, conference presentation + + + + An organizational unit (as opposed to the physical facility) that performs research, provides services, or processes materials + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A person not considered a faculty member but holding an academic appointment. + + + Short definition was partially taken from http://en.wikipedia.org/wiki/Subnational_entity. + For example, the Midwest, northeast U.S. + Smaller administrative division into which a country may be divided. + Boroughs; townships; districts; the Midwest + + + + Use subclasses of core:Geographic Location subclasses instead of this class if possible. + Removed the word "stable" because disputed territories from geopolitical.owl are included. This could imply that the geographic coordinates could change. I've also copied this definition to core:Geographic Location. I think core:Geographic Location and core:Geographic Region are both the same and only one is needed. There is also geopolitical.owl:geographical_region which further causes confusion. + + A location having coordinates in geographic space. + + + + Written musical composition for voice or instruments or both + + + Financial assistance mechanism providing money, property, or both to an eligible entity to carry out an approved project or activity + + + + + + + + + + + + + + + + + + + + + + + Short definition is from the Glossary of NIH Terms. + An intramural or extramural award to support scholarly work, such as UF09179 (VIVO) + + + + + + + + + + + + Marston Science Library + + A collection of any materials, for study and enjoyment, which has been systematically arranged. + Used information from this definition: http://dictionary.reference.com/browse/library. + + + + + + + + + + + Institute for Fundamental Theory + + An Institute normally has a research focus but may also fulfill instructional or outreach roles. + + + An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. + + + + + + + + + + An endeavor, frequently collaborative, that occurs over a finite period of time and is intended to achieve a particular aim. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A role of serving as an educator + + + + + + + + + + + + + + + + + + + + + + + + + + + An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so. + An attestation of qualification, competence, or authority issued to an individual by a third party with a relevant or de facto authority or assumed competence to do so. + + + + + + Postdoctoral research is academic or scholarly research conducted by a person who has completed his or her doctoral studies, normally within the following five years. It is intended to further deepen expertise in a specialist subject. + + + + + + A role of conducting funded or unfunded research, sometimes linked to an Agreement. + Examples of research can be seen at: http://www.ufl.edu/research/products/index.html. Note these may have been funded, but the research doesn't have to be funded. Also, the research may be linked to an Agreement (for example, a Grant), but does not need to be. + + + + Definition from here: http://research.carleton.ca/htr/defs.php. + A person with at least one academic appointment to a specific faculty of a university or institution of higher learning. + + + + A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term) + + + US Patent Data; US Job Data + + A named collection of data, usually containing only one type of data + + + + + + + + + + + + + + + + + + + Currently any abstract name is given to individuals of this class. This could change in the future. + This connects person to their academic degree through this educational training, but can also be used when the training does not result in a degree. + Represents educational training that has been received. + + + Not the same as an award or distinction. + Intel Talent Search; poetry contest + An occasion on which a winner is selected from among two or more contestants. + + + + + A paper presented at a conference; optionally collected into a Proceedings or a special Journal issue + + + + + + + + + + + + + + + + Computer program and its related documentation; directs the operation of a computer + + + + + + + + + + The digital file (or physical equivalent), if available after the conference, vs. the act of attending/presenting: use ConferencePresentation for information about date/time/location/name of the event where the poster was presented + + + + An agreement involving specific deliverables and payment + + + + + + + + + + + + + + + + + + + An offering through an ongoing program or single request of research support: internships, positions, financial awards or other forms of tangible or intangible support + + + + + + + + + + + + + + + + + + A retired faculty member who has retained their rank, title and privileges. + + + Special Libraries Association; Association for Computing Machinery(ACM); American Medical Informatics Association(AMIA) + + A formal organization of people or organizations around a subject or practice. + + + + Residency is a stage of graduate medical training. + + + + An organized series of workshop events, whether repetitions of the same workshop or multiple different workshops. + Use workshop for individual events. + + + + Audiovisual recording in video format + + + A date and/or time + + + functions as an n-ary predicate + a reified relationship + + + + A postdoctoral training appointment (job) + + + Cardiovascular Medicine (division within medicine) + + + + + + + + + + Definition modified from http://www.thefreedictionary.com/division. It is difficult to tell the difference between a division and a department. + An area of corporate activity organized as an administrative or functional unit. + + + The Ornithological Newsletter + + Usually issued periodically, prepared by or for a group or institution to present information to a specific audience, often also made available to the press and public + + + + A proposal for a research grant that has been submitted but not approved; does not represent an existing activity + + + An role of an individual within his or her profession or institution; use outreach provider role for community service or other activities outside the profession. + + + + Member of the International Conference on Complex Systems Organizing Committee + + + + An explicit individual period considered by an academic institution to be its primary academic cycle. + + + + + + A role of being a member in a Process or an Organization + + + An informal organization brought together for the purposes of a project or event. + + VIVO Outreach Team; VIVO Ontology Team + + + + + + + + + + + A course as taught in one time period (such as a semester; although note that a course could consist of only one meeting (teaching session)) by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010 + A course as taught in one time period by one or more instructors, normally but not always for credit. Does not represent either each meeting of the course or the course offering such as Biology 101 taught every semester from 1980 to 2010 + + + + + + + + + + + + + In the future we may be able to make this a defined class that would not need to be directly asserted, but the consensus seems to be that some organizations "are" clinical and some "are" research organizations and that the distinction is important enough to warrant the additional class and class assertions + Any organization with a significant clinical function as a matter of course and not just through occasional clinical roles + + + An ongoing academic initiative not formalized with department or division status. + A Cornell graduate field (http://vivo.cornell.edu/index.jsp?home=65535&collection=820) + + + + An institution that provides medical, surgical, or psychiatric care and treatment for the sick or the injured. + + Definition take from: http://dictionary.reference.com/browse/hospital. + Shands at the University of Florida + + + Short Definition take from http://www.thefreedictionary.com/center. + A place where a particular activity or service is concentrated. + + Alchohol Education Center; Center for Arts and Public Policy; Hearing Research Center + + + + + + + + + + + Address has properties for department name, street, city, state or province, postal code, and country. For US specific address, classify using core:US Postal Code. core:Address will display all addresses. + + + + + + + + + A specification of a location. To classify US specific addresses, use core:US Postal Code. + 200 University Avenue West, Waterloo, Ontario, Canada N2L 3G1 + + + Librarian; Library Systems Analyst; Music Bibliographer + + + + + + + + + + + + + + + + + + + A position held by library and information science professionals, or academic or technical experts, in support of providing information services or materials + + It is the common position in libraries. + + + Indicates the precision of the value of a DateTimeValue instance. + + + + + + An advisory relationship in which a professor advises a graduate student. + + + + Typically a student or a recent graduate undergoing supervised practical training. + + + + A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials. + + + + A person who has already received a bachelor's degree and is working toward a Master's or Doctoral degree. + + + + + + A role of attending an Event or EventSeries + + + + + + The bestowal of an award, honor, or distinction to a person or person's at a particular time. + + + + + + + + + The award bestowed may be represented with the Award class. + + + + + + + + + + + + + + + + + + + + + + + + + + + + An advisory relationship in which one faculty member mentors another faculty member. + + + An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series + + + + An ongoing editorial responsibility for a bibo:Collection, such as a Journal or Series + + + + + + + + + + + + + + + + + Only use this broad role class if no subclasses of role describe the item being classified. + + + + + + + + + A person's, group's or organization's role in an endeavor + Only use if no specific subclasses of core:Role describe the role. + + + + A short written piece focused on an event or announcement of note, having a defined publication time and of less enduring interest than a news feature. + + + + Role of co-principal investigator of an Agreement (for example, a grant), who devotes a specified percentage of time and is considered key personnel. + + + Currently any abstract name is given to members of this class. This could change in the future. + + + + + + + + + Contains the authors name, their rank in the publication, and whether or not they are a corresponding author on the publication. + Authorship of journal articles, books and other original works is a means by which academics communicate the results of their scholarly work, establish priority for their discoveries, and build their reputation among their peers. +This class allows for linking an author to a publication while indicating information about that author's authorship. + + + + + + + + + + + + + + + + + + + + + + Academic position in a university or institution + Professor, associate professor and assistant professor are common positions for academic faculty. + Professor; Associate Professor; Assistant Professor + + + + + + + + + + + + Any organization (likely also asserted as another class of Organization) with a primary, ongoing research function, not just through occasional roles + + + + + + + + + + + A dual relationship of one person being advised or mentored by another person, typically including start and end dates + + + + + + + + + + + + + + + + + + + + + PubMed + A structured file of information or a set of logically related data stored and retrieved using computer-based means + Short Definition is the Medical Subject Heading (MeSH) definition + + + + The result of rendering a work from one language to another + + + Short definition obtained here: http://en.wiktionary.org/wiki/geopolitical_entity. + + Use subclasses of core:GeopoliticalEntity subclasses instead of this class if possible. + A geographical area which is associated with some sort of political structure. + + + Short Definition is the Medical Subject Heading (MeSH) definition + NLM Catalog + + + + + + + + + + + + + + + + + + A list of items in a collection; an ordered compilation of item descriptions and sufficient information to afford access to them + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + general relationship of support + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This is done through a restriction on the foaf:Person class. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This is done through a restriction on the foaf:Person class. + + + + + + + + + + + + + + + + + + + + + + This is done through a restriction on academic degree to allow the values from to be foaf:organization to be used as the range. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This is done through a restriction on academic degree to allow the values from to be foaf:organization to be used as the range. + + + + + + + + + general relationship of support + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Currently being used by a restriction on organization. + + + + + + + + + + + + + + + + + + Note that the administering department is not the central research administration office (such as University of Florida DSP or Cornell OSP) -- we didn't see a need to record a relationship to that office because it implicitly manages all grants. Also note that this is the administering organization for the grant at the awardee side. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This is done with a restriction on agent. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Since we have defined geopolitical.owl.hasMember to be a subproperty of core:hasMember, we should not make changes to this property that would change the definition of geopolitical.owl.hasMember in ways that may make it inconsistent with its usage in other ontologies. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This is done with a restriction on agent. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources. + + + + + + + + + Public Definition source (http://www.answers.com/topic/publisher). + + + + + + + + + + + + + + Public Definition source (http://www.answers.com/topic/publisher). + + + + + + + + + + We would like the domain of core:outcome to be the union of Event and Process; and that same union to be the range for core:outcomeOf, but we cannot currently express this with the editor. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + an information resource (typically a publication) supported by (typically via funding) an agreement (such as a grant) + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Public Description for bibo:distributor taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + We would like the domain of core:outcome to be the union of Event and Process; and that same union to be the range for core:outcomeOf, but we cannot currently express this with the editor. + + + + + + + + + + + + + + + + Note that the administering department is not the central research administration office (such as University of Florida DSP or Cornell OSP) -- we didn't see a need to record a relationship to that office because it implicitly manages all grants. Also note that this is the administering organization for the grant at the awardee side. + + + + + + + + + The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering. + + + + + + + + + + + + + + + + A possible working example: The conference proceeding of the SPIE was generated from the conference - International Society for Optical Engineering. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Currently being used by a restriction on organization. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Since we have defined geopolitical.owl.hasMember to be a subproperty of core:hasMember, we should not make changes to this property that would change the definition of geopolitical.owl.hasMember in ways that may make it inconsistent with its usage in other ontologies. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + RearcherID is a Thomson Reuters project where researchers have a place to manage and share their professional information. It will allow them to solve author identity issues while simultaneously adding dynamic citation metrics and collaboration networks to your personal profile. +Definition source: http://isiwebofknowledge.com/researcherid/ + + + + + + + A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available A PMCID is a unique PubMed Central reference number, which is assigned to each full-text record made available in PubMed Central. The PMCID is issued shortly after the PI or author approves the PubMed Central formatted web version of the submission. + + + + + + + core:localAwardId has a domain of core:Grant, and should be public since that's its public identifier for local use by OSP, accounting, department admins, and the PI + + + + + + + + Chicago; New York; Bloomington; Gainesville + + + + + + + + + + + + + + + conservation + +use one freetextKeyword assertion for each keyword or phrase. + one keyword or phrase per freetextKeyword assertion + + + + True; False + + + + + + The International classification(s) to which the published application has been assigned. + + + + + + 47405-3907 + + + + Apt N26; Mann Library + + + + Information Science; Computer Science; Anthropology + + + + + + + + + + + + + + + + + + + + + We can't yet assume that we will only have a single ORCID id for a person. +source: http://en.wikipedia.org/wiki/ORCID . + + +We wanted this property to be visible so that people would be aware that we intend to carry ORCID ids in VIVO for cross-reference. I don't believe any ORCID ids have been minted yet, but it's hard to imagine they would need to be private since the goal of having them is to disambiguate author references internationally. However, this and the researcherId and scopusId (also with domain foaf:Person) can stay as visible to self-editors for now as they will probably be used mostly in data ingest. It might be nice in the future to let people make their own decision about whether these are visible. + + + + Used for a single narrative summary of research, typically covering a wide range of activities and time periods; use Researcher Role for information on individual activities + + + + + + + Afghanistan; Antigua and Barbuda; Cameroon; Iceland; Jamaica; Nigeria; United States of America + + + + + + + + + + + + + + + + + Not intended to be an institution name. + + + + + + + + + + + + + + + + + + + + + + + + + + + 123 Main Street; ITS department; P.O. Box 783 + + + + B.A. + + A short form for an longer title or name. + + + + this number indicates a position in a list + + + + + Used for a single narrative summary of teaching, typically covering a wide range of courses including for credit and non-credit teaching over multiple semesters; the "teaches" property links a person directly with an instance of a Semester Class, typically from an institutional database of record; then use Teacher Role for information about a person's role in non-credit teaching or their specific contribution to individual courses + + + Definition http://en.wikipedia.org/wiki/Job_title#Job_title. + + administrative secretary + + + + source of definition: http://www.uspto.gov/main/glossary/#p . The following site has patent number formats: http://www.uspto.gov/patents/ebc/kindcodesum.jsp . + + + + + + + Home page for Scopus: http://www.scopus.com/home.url + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 55 + + definition modified from: source (http://en.wikipedia.org/wiki/Seating_capacity). + + + + + + Physical Sciences Librarian + + For example an HR job title for a person might be - Assistant University Librarian, and the preferred job title for that same person could be - Physical Sciences Librarian. + + + + + + + + + Has a domain of Grant. There is not a strong reason have this be publically visible, since most users would care more about the name of the sponsoring agency than its identifier, but it does no harm to be public. + + +See also core:localAwardId. + + + + Indiana; Florida; Minnesota; Michigan; New York; Quebec; Manitoba; Ontario + + + + + + + + + + + + + + + + + + + + + + Used for a single narrative summary of outreach, typically covering a wide range of activities and time periods; use Outreach Provider Role for information on individual activities + + + My extension program consists of developing and reporting disease management strategies that are both economically and environmentally sound for fresh market vegetable production. We hope that some of this testing will result in practices adaptable for organic production. + + + + + + + + + + + + + + + + http://purl.org/ontology/bibo/ + + http://purl.org/ontology/bibo/1.2/ + bibo + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcelements-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcelements-1.5.owl new file mode 100644 index 00000000..5622f49d --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcelements-1.5.owl @@ -0,0 +1,24 @@ + + + This namespace - http://purl.org/dc/elements/1.1/ - does not appear to have this element. + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcterms-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcterms-1.5.owl new file mode 100644 index 00000000..175d75aa --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-dcterms-1.5.owl @@ -0,0 +1,47 @@ + + + Used to link a bibliographic item to one of its contributor: can be an author, an editor, a publisher, etc. + + + This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration. + + + Document1 isVersionOf Document2 + This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration. + + + This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration. + Used to relate a reference citation to a bibliographic resource. + + + Public definition source: http://dublincore.org/2008/01/14/dcterms.rdf# . +Examples of a Publisher include a person, an organization, or a service. Typically, the name of a Publisher should be used to indicate the entity. + Used to link a bibliographic item to its publisher. + + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-event-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-event-1.5.owl new file mode 100644 index 00000000..48a3a4c3 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-event-1.5.owl @@ -0,0 +1,112 @@ + + + + + + + + + + + + + + + Only use if no specific subclasses of event:Event are appropriate. + This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series. + +The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent." + + + + + + + + + + + + + + + + + + + Something that happens at a given place and time. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-fabio-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-fabio-1.5.owl new file mode 100644 index 00000000..f3a8da67 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-fabio-1.5.owl @@ -0,0 +1,43 @@ + + + A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. + A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. + + + + + A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by + A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. + +has super-classes + + + A formal correction to an error introduced by the publisher into a previously published document. + + A formal correction to an error introduced by the publisher into a previously published document. + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-foaf-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-foaf-1.5.owl new file mode 100644 index 00000000..011838f8 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-foaf-1.5.owl @@ -0,0 +1,208 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + The most general classification of a person + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available. + Only use if no specific subclasses of foaf:organization desribe the organization. + A generic class encompassing several types of organizations. + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Ued to describe an organization related to bibliographic items such as a publishing company, etc. + + + + + + + + + + + + + + + + + + + + + Agents are things that do stuff + + + + + + + see: http://xmlns.com/foaf/spec/#term_Agent + + + + + + + + + + + + + + + + + + + + + + + + + Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind. + + + + + + + + + + A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event. + +see: http://xmlns.com/foaf/spec/#term_Group + A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). + + + Definition take from: http://xmlns.com/foaf/spec/#term_based_near . foaf indicates that the status of this term is "unstable". "The based_near relationship relates two "spatial things" (anything that can be somewhere), the latter typically described using the geo:lat / geo:long geo-positioning vocabulary (http://www.w3.org/2003/01/geo/wgs84_pos#). This allows us to say describe the typical latitute and longitude of, say, a Person (people are spatial things - they can be places) without implying that a precise location has been given." + Used to link an agent, related to bibliographic things, to a place where it is based near: can be a city, a monument, a building, etc. + + + + + http://xmlns.com/foaf/spec/#term_lastName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases." + + + http://xmlns.com/foaf/spec/#term_firstName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases." + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-pws-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-pws-1.5.owl new file mode 100644 index 00000000..c4f46b89 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-pws-1.5.owl @@ -0,0 +1,39 @@ + + + + For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation. Represents one person's information from one source at one particular time. + For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation. + + + + + + + + + + + + + + diff --git a/productMods/WEB-INF/ontologies/update/oldVersion/vivo-skos-1.5.owl b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-skos-1.5.owl new file mode 100644 index 00000000..0dda4227 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/oldVersion/vivo-skos-1.5.owl @@ -0,0 +1,45 @@ + + + An idea or notion; a unit of thought. + + + + Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . + + + + + + + + + + + + + + Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy . + + + diff --git a/productMods/WEB-INF/ontologies/update/success.n3 b/productMods/WEB-INF/ontologies/update/success.n3 index 14e94531..b8a8693a 100644 --- a/productMods/WEB-INF/ontologies/update/success.n3 +++ b/productMods/WEB-INF/ontologies/update/success.n3 @@ -5,6 +5,6 @@ vitro:updatedToOntology . rdf:type owl:Thing . vitro:updatedOntology . - vitro:fromOntologyVersion "1.4" . - vitro:toOntologyVersion "1.5" . - \ No newline at end of file + vitro:fromOntologyVersion "1.5" . + vitro:toOntologyVersion "1.6" . + diff --git a/productMods/WEB-INF/resources/startup_listeners.txt b/productMods/WEB-INF/resources/startup_listeners.txt index d27cd019..0399eacc 100644 --- a/productMods/WEB-INF/resources/startup_listeners.txt +++ b/productMods/WEB-INF/resources/startup_listeners.txt @@ -34,7 +34,7 @@ edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdatePermissionSetUris # Invokes process to perform updates to align with ontology changes if needed --> # Needs to run before submodels are attached and Pellet is set up --> -#edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdateKnowledgeBase +edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdateKnowledgeBase edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup diff --git a/productMods/config/listViewConfig-authorInAuthorship.xml b/productMods/config/listViewConfig-authorInAuthorship.xml index 15b952c9..6a4b9aad 100644 --- a/productMods/config/listViewConfig-authorInAuthorship.xml +++ b/productMods/config/listViewConfig-authorInAuthorship.xml @@ -27,7 +27,8 @@ ?hideThis WHERE { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . + ?infoResource a bibo:Document . ?infoResource rdfs:label ?infoResourceName OPTIONAL { ?infoResource bibo:volume ?volume } @@ -80,7 +81,8 @@ CONSTRUCT { ?subject ?property ?authorship . ?authorship ?authorshipProperty ?authorshipValue . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . + ?infoResource a bibo:Document . ?infoResource rdfs:label ?infoResourceName . ?infoResource core:hasPublicationVenue ?publishedIn . ?publishedIn rdfs:label ?journal @@ -138,29 +140,30 @@ ?authorship ?authorshipProperty ?authorshipValue } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource + ?authorship core:relates ?infoResource } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . + ?infoResource a bibo:Document . ?infoResource ?infoResourceProperty ?infoResourceValue } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . ?infoResource bibo:reproducedIn ?appearsInObj . ?appearsInObj rdfs:label ?appearsIn } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . ?infoResource core:publisher ?publisherObj . ?publisherObj rdfs:label ?publisher } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . ?infoResource core:editor ?editorObj . ?editorObj rdfs:label ?editor } UNION { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . ?infoResource core:partOf ?partOfObj . ?partOfObj rdfs:label ?partOf } @@ -170,14 +173,17 @@ PREFIX core: <http://vivoweb.org/ontology/core#> PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> + PREFIX bibo: <http://purl.org/ontology/bibo/> CONSTRUCT { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . + ?infoResource a bibo:Document . ?infoResource core:dateTimeValue ?dateTimeValue . ?dateTimeValue core:dateTime ?dateTime } WHERE { ?subject ?property ?authorship . - ?authorship core:linkedInformationResource ?infoResource . + ?authorship core:relates ?infoResource . + ?infoResource a bibo:Document . ?infoResource core:dateTimeValue ?dateTimeValue . ?dateTimeValue core:dateTime ?dateTime }