diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql
index 03405d95..7443d28a 100644
--- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql
+++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql
@@ -8,7 +8,8 @@ CONSTRUCT {
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
- ?s vivo:middleName ?middleName
+ ?s vivo:middleName ?middleName .
+ ?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2d.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2d.sparql
index a065a9fe..cb32f1b9 100644
--- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2d.sparql
+++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2d.sparql
@@ -8,6 +8,7 @@ CONSTRUCT {
?name vivo:middleName ?middleName .
} WHERE {
?s vivo:middleName ?middleName .
+ ?s a foaf:Person .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}
diff --git a/rdf/tbox/filegraph/object-properties.owl b/rdf/tbox/filegraph/object-properties.owl
index 4c95312e..f61d226f 100644
--- a/rdf/tbox/filegraph/object-properties.owl
+++ b/rdf/tbox/filegraph/object-properties.owl
@@ -201,7 +201,6 @@
-
@@ -317,7 +316,6 @@
-
@@ -497,7 +495,6 @@
-
@@ -561,25 +558,6 @@
related technique
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
@@ -593,8 +571,6 @@
PERSON: Melissa Haendel
PERSON: Melissa Haendel
used to study
-
-
@@ -914,14 +890,7 @@ there is a measurement process p that has specified output m, a measurement datu
http://www.affymetrix.com/products/arrays/specific/hgu133.affx is_manufactered_by http://www.affymetrix.com/ (if we decide to use these URIs for the actual entities)
is_manufactured_by
-
-
-
-
-
-
-
-
+
@@ -1671,7 +1640,8 @@ there is a measurement process p that has specified output m, a measurement datu
-
+
+
@@ -1679,7 +1649,21 @@ there is a measurement process p that has specified output m, a measurement datu
-
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
@@ -1687,7 +1671,16 @@ there is a measurement process p that has specified output m, a measurement datu
-
+
+
+
+
+
+
+
+
+
+
@@ -1704,7 +1697,6 @@ there is a measurement process p that has specified output m, a measurement datu
-
@@ -1717,22 +1709,6 @@ there is a measurement process p that has specified output m, a measurement datu
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
diff --git a/rdf/tbox/filegraph/research-resource.owl b/rdf/tbox/filegraph/research-resource.owl
index dccf8f43..795cdeb9 100644
--- a/rdf/tbox/filegraph/research-resource.owl
+++ b/rdf/tbox/filegraph/research-resource.owl
@@ -507,5 +507,18 @@
+
+
+
+
+ OBI branch derived + wikipedia (http://en.wikipedia.org/wiki/Protocol_%28natural_sciences%29)
+ PMID: 18388943.Nat Protoc. 2008;3(4):612-8.Protocol for the induction of arthritis in C57BL/6 mice.
+ PlanAndPlannedProcess Branch
+ Protocol
+ a protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.
+ protocol
+
+
+
diff --git a/rdf/tbox/firsttime/initialTBoxAnnotations.n3 b/rdf/tbox/firsttime/initialTBoxAnnotations.n3
index cef6df9c..672d3388 100644
--- a/rdf/tbox/firsttime/initialTBoxAnnotations.n3
+++ b/rdf/tbox/firsttime/initialTBoxAnnotations.n3
@@ -407,6 +407,9 @@ foaf:Person
obo:OBI_0000643
rdfs:label "has grain"@en-US .
+obo:OBI_0000272
+ rdfs:label "protocol"@en-US .
+
vcard:Identification
rdfs:label "Identification"@en-US .
@@ -5980,7 +5983,11 @@ vcard:Name
rdfs:label "Name"@en-US .
obo:BFO_0000055
- rdfs:label "realizes"@en-US .
+ rdfs:label "realizes"@en-US ;
+ vitro:hiddenFromDisplayBelowRoleLevelAnnot
+ ;
+ vitro:prohibitedFromUpdateBelowRoleLevelAnnot
+ .
geo:nationalityAR
rdfs:label "nationalityAR"@en-US ;
@@ -6173,6 +6180,8 @@ obo:ERO_0001716
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
;
vitro:selectFromExistingAnnot
+ "true"^^xsd:boolean ;
+ vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
vcard:hasRelated