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Made some significant changes as part of tweaking the queries to reduce response times with SDB. -- NOT CONSIDERED FINAL.

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This commit is contained in:
bkoniden 2011-02-09 22:13:36 +00:00
parent e09eeae3b9
commit 706d9d3c9f
21 changed files with 278 additions and 207 deletions
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19
src/edu/cornell/mannlib/vitro/webapp/controller/visualization/freemarker/StandardVisualizationController.java
View file

@ -6,6 +6,7 @@ import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.DatasetFactory;
import com.hp.hpl.jena.query.Syntax;
import com.hp.hpl.jena.rdf.model.Model;
@ -81,14 +82,14 @@ public class StandardVisualizationController extends FreemarkerHttpServlet {
}
DataSource dataSource = setupJENADataSource(model, vitroRequest);
Dataset dataset = setupJENADataSource(vitroRequest);
if (dataSource != null && visRequestHandler != null) {
if (dataset != null && visRequestHandler != null) {
try {
return visRequestHandler.generateStandardVisualization(vitroRequest,
log,
dataSource);
dataset);
} catch (MalformedQueryParametersException e) {
return UtilityFunctions.handleMalformedParameters(
"Standard Visualization Query Error - Individual Publication Count",
@ -130,16 +131,16 @@ public class StandardVisualizationController extends FreemarkerHttpServlet {
return visRequestHandler;
}
private DataSource setupJENADataSource(Model model, VitroRequest vreq) {
private Dataset setupJENADataSource(VitroRequest vreq) {
log.debug("rdfResultFormat was: " + VisConstants.RDF_RESULT_FORMAT_PARAM);
DataSource dataSource = DatasetFactory.create();
ModelMaker maker = (ModelMaker) getServletContext().getAttribute("vitroJenaModelMaker");
// DataSource dataSource = DatasetFactory.create();
// ModelMaker maker = (ModelMaker) getServletContext().getAttribute("vitroJenaModelMaker");
//
// dataSource.setDefaultModel(model);
dataSource.setDefaultModel(model);
return dataSource;
return vreq.getDataset();
}
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/coauthorship/CoAuthorshipQueryRunner.java
View file

@ -16,7 +16,7 @@ import org.apache.commons.logging.Log;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -51,7 +51,7 @@ public class CoAuthorshipQueryRunner implements QueryRunner<CoAuthorshipData> {
private String egoURI;
private DataSource dataSource;
private Dataset Dataset;
private Log log;
@ -60,10 +60,10 @@ public class CoAuthorshipQueryRunner implements QueryRunner<CoAuthorshipData> {
private UniqueIDGenerator edgeIDGenerator;
public CoAuthorshipQueryRunner(String egoURI,
DataSource dataSource, Log log) {
Dataset Dataset, Log log) {
this.egoURI = egoURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
this.log = log;
this.nodeIDGenerator = new UniqueIDGenerator();
@ -393,12 +393,12 @@ public class CoAuthorshipQueryRunner implements QueryRunner<CoAuthorshipData> {
}
private ResultSet executeQuery(String queryText,
DataSource dataSource) {
Dataset Dataset) {
QueryExecution queryExecution = null;
Query query = QueryFactory.create(queryText, SYNTAX);
queryExecution = QueryExecutionFactory.create(query, dataSource);
queryExecution = QueryExecutionFactory.create(query, Dataset);
return queryExecution.execSelect();
}
@ -462,7 +462,7 @@ public class CoAuthorshipQueryRunner implements QueryRunner<CoAuthorshipData> {
}
ResultSet resultSet = executeQuery(generateEgoCoAuthorshipSparqlQuery(this.egoURI),
this.dataSource);
this.Dataset);
return createQueryResult(resultSet);
}

12
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/coauthorship/CoAuthorshipRequestHandler.java
View file

@ -12,7 +12,7 @@ import org.apache.commons.lang.StringEscapeUtils;
import org.apache.commons.lang.StringUtils;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import edu.cornell.mannlib.vitro.webapp.beans.Portal;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
@ -40,13 +40,13 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
throw new UnsupportedOperationException("CoAuthorship does not provide Ajax Response.");
}
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
@ -59,7 +59,7 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
.VIS_MODE_KEY);
QueryRunner<CoAuthorshipData> queryManager =
new CoAuthorshipQueryRunner(egoURI, dataSource, log);
new CoAuthorshipQueryRunner(egoURI, Dataset, log);
CoAuthorshipData authorNodesAndEdges =
queryManager.getQueryResult();
@ -105,7 +105,7 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
public ResponseValues generateStandardVisualization(VitroRequest vitroRequest,
Log log,
DataSource dataSource)
Dataset Dataset)
throws MalformedQueryParametersException {
/*
@ -117,7 +117,7 @@ public class CoAuthorshipRequestHandler implements VisualizationRequestHandler {
.INDIVIDUAL_URI_KEY);
QueryRunner<CoAuthorshipData> queryManager =
new CoAuthorshipQueryRunner(egoURI, dataSource, log);
new CoAuthorshipQueryRunner(egoURI, Dataset, log);
CoAuthorshipData authorNodesAndEdges =
queryManager.getQueryResult();

79
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/coprincipalinvestigator/CoPIGrantCountConstructQueryRunner.java
View file

@ -11,7 +11,7 @@ import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -30,7 +30,7 @@ public class CoPIGrantCountConstructQueryRunner {
private String egoURI;
private DataSource dataSource;
private Dataset Dataset;
private long before, after;
@ -42,9 +42,9 @@ public class CoPIGrantCountConstructQueryRunner {
+ "?Grant rdfs:label ?GrantLabel . "
+ "?Grant core:relatedRole ?RelatedRole . ";
public CoPIGrantCountConstructQueryRunner(String egoURI, DataSource dataSource, Log log){
public CoPIGrantCountConstructQueryRunner(String egoURI, Dataset Dataset, Log log){
this.egoURI = egoURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
//this.log = log;
}
@ -61,17 +61,17 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForInvestigatorRoleOfProperty(String queryURI){
private String generateConstructQueryForInvestigatorRoleOfProperty(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:investigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
+ "}"
+ "WHERE { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:investigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
@ -80,17 +80,17 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForPrincipalInvestigatorRoleOfProperty(String queryURI){
private String generateConstructQueryForPrincipalInvestigatorRoleOfProperty(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:principalInvestigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
+ "}"
+ "WHERE { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:principalInvestigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
@ -99,17 +99,17 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(String queryURI){
private String generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:co-PrincipalInvestigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
+ "}"
+ "WHERE { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ SPARQL_QUERY_COMMON_CONSTRUCT_AND_WHERE_STRING
+ "?RelatedRole core:co-PrincipalInvestigatorRoleOf ?coInvestigator ."
+ "?coInvestigator rdfs:label ?coInvestigatorLabel . "
@ -118,11 +118,11 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofRole(String queryURI){
private String generateConstructQueryForDateTimeValueofRole(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue . "
@ -131,13 +131,13 @@ public class CoPIGrantCountConstructQueryRunner {
+ "}"
+ "WHERE { "
+ "{"
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue . "
+ "} UNION "
+ "{"
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:end ?endDate . "
+ "?endDate core:dateTime ?endDateTimeValue . "
@ -147,11 +147,11 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofGrant(String queryURI){
private String generateConstructQueryForDateTimeValueofGrant(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
@ -161,14 +161,14 @@ public class CoPIGrantCountConstructQueryRunner {
+ "}"
+ "WHERE { "
+ "{"
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
+ "?startDateForGrant core:dateTime ?startDateTimeValueForGrant . "
+ "} UNION "
+ "{"
+ "<"+queryURI+ "> ?preboundProperty ?Role . "
+ "<"+queryURI+ ">" + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:end ?endDateForGrant . "
@ -179,15 +179,16 @@ public class CoPIGrantCountConstructQueryRunner {
return sparqlQuery;
}
private Model executeQuery(Set<String> constructQueries, DataSource dataSource) {
private Model executeQuery(Set<String> constructQueries, Dataset Dataset) {
Model constructedModel = ModelFactory.createDefaultModel();
before = System.currentTimeMillis();
for (String queryString : constructQueries) {
log.debug("CONSTRUCT query string : " + queryString);
before = System.currentTimeMillis();
log.info("CONSTRUCT query string : " + queryString);
Query query = null;
@ -200,16 +201,17 @@ public class CoPIGrantCountConstructQueryRunner {
}
QueryExecution qe = QueryExecutionFactory.create(
query, dataSource);
query, Dataset);
try {
qe.execConstruct(constructedModel);
} finally {
qe.close();
}
}
after = System.currentTimeMillis();
log.info("Time taken to execute the CONSTRUCT queries is in milliseconds: " + (after - before) );
log.info("Time taken to execute the CONSTRUCT query is in milliseconds: " + (after - before) );
}
return constructedModel;
}
@ -238,7 +240,7 @@ public class CoPIGrantCountConstructQueryRunner {
populateConstructQueries(constructQueries);
Model model = executeQuery(constructQueries,
this.dataSource);
this.Dataset);
return model;
@ -247,12 +249,23 @@ public class CoPIGrantCountConstructQueryRunner {
private void populateConstructQueries(Set<String> constructQueries) {
constructQueries.add(generateConstructQueryForInvestigatorLabel(this.egoURI));
constructQueries.add(generateConstructQueryForInvestigatorRoleOfProperty(this.egoURI));
constructQueries.add(generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(this.egoURI));
constructQueries.add(generateConstructQueryForPrincipalInvestigatorRoleOfProperty(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI));
constructQueries.add(generateConstructQueryForInvestigatorRoleOfProperty(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForInvestigatorRoleOfProperty(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForInvestigatorRoleOfProperty(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForCoPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForPrincipalInvestigatorRoleOfProperty(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
}
}

13
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/coprincipalinvestigator/CoPIGrantCountRequestHandler.java
View file

@ -11,7 +11,8 @@ import org.apache.commons.lang.StringEscapeUtils;
import org.apache.commons.lang.StringUtils;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.rdf.model.Model;
import edu.cornell.mannlib.vitro.webapp.beans.Portal;
@ -35,19 +36,19 @@ public class CoPIGrantCountRequestHandler implements VisualizationRequestHandler
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Co-PI Grant Count does not provide Ajax Response.");
}
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String egoURI = vitroRequest.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
String visMode = vitroRequest.getParameter(VisualizationFrameworkConstants.VIS_MODE_KEY);
CoPIGrantCountConstructQueryRunner constructQueryRunner = new CoPIGrantCountConstructQueryRunner(egoURI, dataSource, log);
CoPIGrantCountConstructQueryRunner constructQueryRunner = new CoPIGrantCountConstructQueryRunner(egoURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<CoPIData> queryManager = new CoPIGrantCountQueryRunner(egoURI, constructedModel, log);
@ -95,7 +96,7 @@ public class CoPIGrantCountRequestHandler implements VisualizationRequestHandler
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
/*
* Support for this has ceased to exist. Standalone mode was created only for demo
@ -103,7 +104,7 @@ public class CoPIGrantCountRequestHandler implements VisualizationRequestHandler
* */
/* String egoURI = vitroRequest.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
QueryRunner<CoPIData> queryManager = new CoPIGrantCountQueryRunner(egoURI, dataSource, log);
QueryRunner<CoPIData> queryManager = new CoPIGrantCountQueryRunner(egoURI, Dataset, log);
CoPIData PINodesAndEdges = queryManager.getQueryResult();

10
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitycomparison/EntityComparisonUtilityFunctions.java
View file

@ -7,7 +7,7 @@ import java.util.Set;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.QuerySolution;
import com.hp.hpl.jena.query.ResultSet;
import com.hp.hpl.jena.rdf.model.Model;
@ -61,7 +61,7 @@ public class EntityComparisonUtilityFunctions {
return "";
}
public static String getHighestLevelOrganizationURI(Log log, DataSource dataSource)
public static String getHighestLevelOrganizationURI(Log log, Dataset Dataset)
throws MalformedQueryParametersException {
Map<String, String> fieldLabelToOutputFieldLabel = new HashMap<String, String>();
@ -82,7 +82,7 @@ public class EntityComparisonUtilityFunctions {
QueryRunner<ResultSet> highestLevelOrganizationQueryHandler = new GenericQueryRunner(
fieldLabelToOutputFieldLabel, aggregationRules, whereClause,
groupOrderClause, dataSource, log);
groupOrderClause, Dataset, log);
String highestLevelOrgURI = EntityComparisonUtilityFunctions
.getHighestLevelOrganizationURI(
@ -92,10 +92,10 @@ public class EntityComparisonUtilityFunctions {
}
public static Map<String, Set<String>> getSubEntityTypes(Log log,
DataSource dataSource, String subjectOrganization)
Dataset Dataset, String subjectOrganization)
throws MalformedQueryParametersException {
EntitySubOrganizationTypesConstructQueryRunner constructQueryRunnerForSubOrganizationTypes = new EntitySubOrganizationTypesConstructQueryRunner(subjectOrganization, dataSource, log) ;
EntitySubOrganizationTypesConstructQueryRunner constructQueryRunnerForSubOrganizationTypes = new EntitySubOrganizationTypesConstructQueryRunner(subjectOrganization, Dataset, log) ;
Model constructedModelForSubOrganizationTypes = constructQueryRunnerForSubOrganizationTypes.getConstructedModel();
QueryRunner<Map<String, Set<String>>> queryManagerForsubOrganisationTypes = new EntitySubOrganizationTypesQueryRunner(

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitycomparison/EntityPublicationCountConstructQueryRunner.java
View file

@ -11,7 +11,7 @@ import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -29,15 +29,15 @@ public class EntityPublicationCountConstructQueryRunner {
private String egoURI;
private DataSource dataSource;
private Dataset Dataset;
private Log log = LogFactory.getLog(EntityPublicationCountConstructQueryRunner.class.getName());
private long before, after;
public EntityPublicationCountConstructQueryRunner(String egoURI, DataSource dataSource, Log log){
public EntityPublicationCountConstructQueryRunner(String egoURI, Dataset Dataset, Log log){
this.egoURI = egoURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
//this.log = log;
}
@ -186,7 +186,7 @@ public class EntityPublicationCountConstructQueryRunner {
}
private Model executeQuery(Set<String> constructQueries, DataSource dataSource) {
private Model executeQuery(Set<String> constructQueries, Dataset Dataset) {
Model constructedModel = ModelFactory.createDefaultModel();
@ -208,7 +208,7 @@ public class EntityPublicationCountConstructQueryRunner {
}
QueryExecution qe = QueryExecutionFactory.create(
query, dataSource);
query, Dataset);
try {
qe.execConstruct(constructedModel);
} finally {
@ -247,7 +247,7 @@ public class EntityPublicationCountConstructQueryRunner {
populateConstructQueries(constructQueries);
Model model = executeQuery(constructQueries,
this.dataSource);
this.Dataset);
return model;

30
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitycomparison/EntityPublicationCountRequestHandler.java
View file

@ -18,7 +18,7 @@ import com.google.gson.Gson;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.rdf.model.Model;
@ -45,7 +45,7 @@ public class EntityPublicationCountRequestHandler implements
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String entityURI = vitroRequest
@ -54,7 +54,7 @@ public class EntityPublicationCountRequestHandler implements
if (StringUtils.isNotBlank(entityURI)){
return getSubjectEntityAndGenerateResponse(vitroRequest, log,
dataSource, entityURI);
Dataset, entityURI);
} else {
String staffProvidedHighestLevelOrganization = ConfigurationProperties.getProperty("visualization.topLevelOrg");
@ -79,26 +79,26 @@ public class EntityPublicationCountRequestHandler implements
} else {
return getSubjectEntityAndGenerateResponse(vitroRequest,
log, dataSource,
log, Dataset,
staffProvidedHighestLevelOrganization);
}
}
String highestLevelOrgURI = EntityComparisonUtilityFunctions.getHighestLevelOrganizationURI(log,
dataSource);
Dataset);
return getSubjectEntityAndGenerateResponse(vitroRequest, log,
dataSource, highestLevelOrgURI);
Dataset, highestLevelOrgURI);
}
}
private ResponseValues getSubjectEntityAndGenerateResponse(
VitroRequest vitroRequest, Log log, DataSource dataSource,
VitroRequest vitroRequest, Log log, Dataset Dataset,
String subjectEntityURI)
throws MalformedQueryParametersException {
EntityPublicationCountConstructQueryRunner constructQueryRunner = new EntityPublicationCountConstructQueryRunner(subjectEntityURI, dataSource, log);
EntityPublicationCountConstructQueryRunner constructQueryRunner = new EntityPublicationCountConstructQueryRunner(subjectEntityURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<Entity> queryManager = new EntityPublicationCountQueryRunner(
@ -115,19 +115,19 @@ public class EntityPublicationCountRequestHandler implements
} else {
return getSubEntityTypesAndRenderStandaloneResponse(
vitroRequest, log, dataSource,
vitroRequest, log, Dataset,
subjectEntityURI, entity);
}
}
private ResponseValues getSubEntityTypesAndRenderStandaloneResponse(
VitroRequest vitroRequest, Log log, DataSource dataSource,
VitroRequest vitroRequest, Log log, Dataset Dataset,
String subjectEntityURI, Entity entity)
throws MalformedQueryParametersException {
Map<String, Set<String>> subOrganizationTypesResult = EntityComparisonUtilityFunctions.getSubEntityTypes(
log, dataSource, subjectEntityURI);
log, Dataset, subjectEntityURI);
return prepareStandaloneResponse(vitroRequest, entity, subjectEntityURI,
subOrganizationTypesResult);
@ -136,13 +136,13 @@ public class EntityPublicationCountRequestHandler implements
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String entityURI = vitroRequest
.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
EntityPublicationCountConstructQueryRunner constructQueryRunner = new EntityPublicationCountConstructQueryRunner(entityURI, dataSource, log);
EntityPublicationCountConstructQueryRunner constructQueryRunner = new EntityPublicationCountConstructQueryRunner(entityURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<Entity> queryManager = new EntityPublicationCountQueryRunner(
@ -151,7 +151,7 @@ public class EntityPublicationCountRequestHandler implements
Entity entity = queryManager.getQueryResult();
Map<String, Set<String>> subOrganizationTypesResult = EntityComparisonUtilityFunctions.getSubEntityTypes(
log, dataSource, entityURI);
log, Dataset, entityURI);
return prepareDataResponse(entity, entity.getSubEntities(),subOrganizationTypesResult);
@ -160,7 +160,7 @@ public class EntityPublicationCountRequestHandler implements
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Entity Pub Count does not provide Ajax Response.");
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitycomparison/EntitySubOrganizationTypesConstructQueryRunner.java
View file

@ -12,7 +12,7 @@ import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -30,13 +30,13 @@ public class EntitySubOrganizationTypesConstructQueryRunner {
private String egoURI;
private DataSource dataSource;
private Dataset Dataset;
private Log log = LogFactory.getLog(EntitySubOrganizationTypesConstructQueryRunner.class.getName());
public EntitySubOrganizationTypesConstructQueryRunner(String egoURI, DataSource dataSource, Log log){
public EntitySubOrganizationTypesConstructQueryRunner(String egoURI, Dataset Dataset, Log log){
this.egoURI = egoURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
//this.log = log;
}
@ -105,7 +105,7 @@ public class EntitySubOrganizationTypesConstructQueryRunner {
}
private Model executeQuery(Set<String> constructQueries, DataSource dataSource) {
private Model executeQuery(Set<String> constructQueries, Dataset Dataset) {
Model constructedModel = ModelFactory.createDefaultModel();
@ -124,7 +124,7 @@ public class EntitySubOrganizationTypesConstructQueryRunner {
}
QueryExecution qe = QueryExecutionFactory.create(
query, dataSource);
query, Dataset);
try {
qe.execConstruct(constructedModel);
} finally {
@ -160,7 +160,7 @@ public class EntitySubOrganizationTypesConstructQueryRunner {
populateConstructQueries(constructQueries);
Model model = executeQuery(constructQueries,
this.dataSource);
this.Dataset);
//model.write(System.out);
return model;

84
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitygrantcount/EntityGrantCountConstructQueryRunner.java
View file

@ -12,7 +12,7 @@ import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -30,15 +30,15 @@ public class EntityGrantCountConstructQueryRunner {
private String egoURI;
private DataSource dataSource;
private Dataset Dataset;
private long before, after;
private Log log = LogFactory.getLog(EntityGrantCountConstructQueryRunner.class.getName());
public EntityGrantCountConstructQueryRunner(String egoURI, DataSource dataSource, Log log){
public EntityGrantCountConstructQueryRunner(String egoURI, Dataset Dataset, Log log){
this.egoURI = egoURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
//this.log = log;
}
@ -55,14 +55,14 @@ public class EntityGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(String queryURI){
private String generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue . "
@ -74,7 +74,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue . "
@ -83,7 +83,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:end ?endDate . "
+ "?endDate core:dateTime ?endDateTimeValue . "
@ -93,14 +93,14 @@ public class EntityGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(String queryURI){
private String generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
@ -113,7 +113,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
@ -123,7 +123,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:hasSubOrganization ?subOrganization . "
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:end ?endDateForGrant . "
@ -134,13 +134,13 @@ public class EntityGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofRole(String queryURI){
private String generateConstructQueryForDateTimeValueofRole(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue . "
@ -151,7 +151,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "{"
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:start ?startDate . "
+ "?startDate core:dateTime ?startDateTimeValue "
@ -159,7 +159,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "{"
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:dateTimeInterval ?dateTimeIntervalValue . "
+ "?dateTimeIntervalValue core:end ?endDate . "
+ "?endDate core:dateTime ?endDateTimeValue "
@ -169,13 +169,13 @@ public class EntityGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForDateTimeValueofGrant(String queryURI){
private String generateConstructQueryForDateTimeValueofGrant(String queryURI, String preboundProperty){
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
@ -187,7 +187,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "{"
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:start ?startDateForGrant . "
@ -196,7 +196,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "{"
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant core:dateTimeInterval ?dateTimeIntervalValueForGrant . "
+ "?dateTimeIntervalValueForGrant core:end ?endDateForGrant . "
@ -207,7 +207,7 @@ public class EntityGrantCountConstructQueryRunner {
return sparqlQuery;
}
private String generateConstructQueryForSubOrganizations(String queryURI){
private String generateConstructQueryForSubOrganizations(String queryURI, String preboundProperty){
String sparqlQuery =
@ -217,7 +217,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person rdfs:label ?PersonLabel ."
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant rdfs:label ?GrantLabel "
+"}"
@ -227,7 +227,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "?subOrganization core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person rdfs:label ?PersonLabel ."
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant rdfs:label ?GrantLabel "
+ "}" ;
@ -237,7 +237,7 @@ public class EntityGrantCountConstructQueryRunner {
}
private String generateConstructQueryForPersons(String queryURI){
private String generateConstructQueryForPersons(String queryURI, String preboundProperty){
String sparqlQuery =
@ -245,7 +245,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person rdfs:label ?PersonLabel ."
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant rdfs:label ?GrantLabel "
+"}"
@ -253,7 +253,7 @@ public class EntityGrantCountConstructQueryRunner {
+ "<"+queryURI+ "> core:organizationForPosition ?Position . "
+ "?Position core:positionForPerson ?Person . "
+ "?Person rdfs:label ?PersonLabel ."
+ "?Person ?preboundProperty ?Role . "
+ "?Person " + preboundProperty + " ?Role . "
+ "?Role core:roleIn ?Grant ."
+ "?Grant rdfs:label ?GrantLabel "
+ "}" ;
@ -265,7 +265,7 @@ public class EntityGrantCountConstructQueryRunner {
private Model executeQuery(Set<String> constructQueries, DataSource dataSource) {
private Model executeQuery(Set<String> constructQueries, Dataset Dataset) {
Model constructedModel = ModelFactory.createDefaultModel();
@ -287,7 +287,7 @@ public class EntityGrantCountConstructQueryRunner {
}
QueryExecution qe = QueryExecutionFactory.create(
query, dataSource);
query, Dataset);
try {
qe.execConstruct(constructedModel);
} finally {
@ -328,7 +328,7 @@ public class EntityGrantCountConstructQueryRunner {
populateConstructQueries(constructQueries);
Model model = executeQuery(constructQueries,
this.dataSource);
this.Dataset);
return model;
@ -337,13 +337,27 @@ public class EntityGrantCountConstructQueryRunner {
private void populateConstructQueries(Set<String> constructQueries) {
constructQueries.add(generateConstructQueryForOrganizationLabel(this.egoURI));
constructQueries.add(generateConstructQueryForSubOrganizations(this.egoURI));
constructQueries.add(generateConstructQueryForPersons(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(this.egoURI));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI));
constructQueries.add(generateConstructQueryForSubOrganizations(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForPersons(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasInvestigatorRole"));
constructQueries.add(generateConstructQueryForSubOrganizations(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForPersons(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasPrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForSubOrganizations(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForPersons(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRoleForOneLevelDeep(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofRole(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrantForOneLevelDeep(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
constructQueries.add(generateConstructQueryForDateTimeValueofGrant(this.egoURI, "core:hasCo-PrincipalInvestigatorRole"));
}

30
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/entitygrantcount/EntityGrantCountRequestHandler.java
View file

@ -18,7 +18,7 @@ import com.google.gson.Gson;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.rdf.model.Model;
import edu.cornell.mannlib.vitro.webapp.ConfigurationProperties;
@ -46,7 +46,7 @@ public class EntityGrantCountRequestHandler implements
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String entityURI = vitroRequest
@ -55,7 +55,7 @@ public class EntityGrantCountRequestHandler implements
if (StringUtils.isNotBlank(entityURI)){
return getSubjectEntityAndGenerateResponse(vitroRequest, log,
dataSource, entityURI);
Dataset, entityURI);
} else {
@ -81,16 +81,16 @@ public class EntityGrantCountRequestHandler implements
} else {
return getSubjectEntityAndGenerateResponse(vitroRequest,
log, dataSource,
log, Dataset,
staffProvidedHighestLevelOrganization);
}
}
String highestLevelOrgURI = EntityComparisonUtilityFunctions.getHighestLevelOrganizationURI(log,
dataSource);
Dataset);
return getSubjectEntityAndGenerateResponse(vitroRequest, log,
dataSource, highestLevelOrgURI);
Dataset, highestLevelOrgURI);
}
@ -98,13 +98,13 @@ public class EntityGrantCountRequestHandler implements
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String entityURI = vitroRequest
.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
EntityGrantCountConstructQueryRunner constructQueryRunner = new EntityGrantCountConstructQueryRunner(entityURI, dataSource, log);
EntityGrantCountConstructQueryRunner constructQueryRunner = new EntityGrantCountConstructQueryRunner(entityURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<Entity> queryManager = new EntityGrantCountQueryRunner(
@ -114,7 +114,7 @@ public class EntityGrantCountRequestHandler implements
Map<String, Set<String>> subOrganizationTypesResult = EntityComparisonUtilityFunctions.getSubEntityTypes(
log, dataSource, entityURI);
log, Dataset, entityURI);
return prepareDataResponse(entity, entity.getSubEntities(),subOrganizationTypesResult);
@ -122,16 +122,16 @@ public class EntityGrantCountRequestHandler implements
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Entity Grant Count does not provide Ajax Response.");
}
private ResponseValues getSubjectEntityAndGenerateResponse(
VitroRequest vitroRequest, Log log, DataSource dataSource,
VitroRequest vitroRequest, Log log, Dataset Dataset,
String subjectEntityURI)
throws MalformedQueryParametersException {
EntityGrantCountConstructQueryRunner constructQueryRunner = new EntityGrantCountConstructQueryRunner(subjectEntityURI, dataSource, log);
EntityGrantCountConstructQueryRunner constructQueryRunner = new EntityGrantCountConstructQueryRunner(subjectEntityURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<Entity> queryManager = new EntityGrantCountQueryRunner(
@ -146,18 +146,18 @@ public class EntityGrantCountRequestHandler implements
} else {
return getSubEntityTypesAndRenderStandaloneResponse(
vitroRequest, log, dataSource,
vitroRequest, log, Dataset,
subjectEntityURI, entity);
}
}
private ResponseValues getSubEntityTypesAndRenderStandaloneResponse(
VitroRequest vitroRequest, Log log, DataSource dataSource,
VitroRequest vitroRequest, Log log, Dataset Dataset,
String subjectOrganization, Entity entity)
throws MalformedQueryParametersException {
Map<String, Set<String>> subOrganizationTypesResult = EntityComparisonUtilityFunctions.getSubEntityTypes(
log, dataSource, subjectOrganization);
log, Dataset, subjectOrganization);
return prepareStandaloneResponse(vitroRequest, entity, subjectOrganization,
subOrganizationTypesResult);

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/persongrantcount/PersonGrantCountQueryRunner.java
View file

@ -11,7 +11,7 @@ import org.apache.commons.logging.Log;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -40,7 +40,7 @@ public class PersonGrantCountQueryRunner implements QueryRunner<Set<Grant>>{
protected static final Syntax SYNTAX = Syntax.syntaxARQ;
private String personURI;
private DataSource dataSource;
private Dataset Dataset;
private Individual principalInvestigator;
public Individual getPrincipalInvestigator(){
@ -83,10 +83,10 @@ public class PersonGrantCountQueryRunner implements QueryRunner<Set<Grant>>{
+ "}" ;
public PersonGrantCountQueryRunner(String personURI, DataSource dataSource, Log log){
public PersonGrantCountQueryRunner(String personURI, Dataset Dataset, Log log){
this.personURI = personURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
this.log = log;
}
@ -142,12 +142,12 @@ public class PersonGrantCountQueryRunner implements QueryRunner<Set<Grant>>{
return PIGrant;
}
private ResultSet executeQuery(String queryURI, DataSource dataSource){
private ResultSet executeQuery(String queryURI, Dataset Dataset){
QueryExecution queryExecution = null;
Query query = QueryFactory.create(getSparqlQuery(queryURI), SYNTAX);
queryExecution = QueryExecutionFactory.create(query,dataSource);
queryExecution = QueryExecutionFactory.create(query,Dataset);
return queryExecution.execSelect();
}
@ -241,7 +241,7 @@ public class PersonGrantCountQueryRunner implements QueryRunner<Set<Grant>>{
throw new MalformedQueryParametersException("URL parameter is either null or empty.");
}
ResultSet resultSet = executeQuery(this.personURI, this.dataSource);
ResultSet resultSet = executeQuery(this.personURI, this.Dataset);
return createJavaValueObjects(resultSet);
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/persongrantcount/PersonGrantCountRequestHandler.java
View file

@ -11,7 +11,7 @@ import org.apache.commons.lang.StringEscapeUtils;
import org.apache.commons.lang.StringUtils;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import edu.cornell.mannlib.vitro.webapp.beans.Portal;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
@ -47,14 +47,14 @@ public class PersonGrantCountRequestHandler implements VisualizationRequestHandl
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String personURI = vitroRequest
.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, dataSource, log );
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, Dataset, log );
Set<Grant> piGrants = queryManager.getQueryResult();
@ -77,7 +77,7 @@ public class PersonGrantCountRequestHandler implements VisualizationRequestHandl
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
String personURI = vitroRequest
.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
@ -88,7 +88,7 @@ public class PersonGrantCountRequestHandler implements VisualizationRequestHandl
String visContainer = vitroRequest
.getParameter(VisualizationFrameworkConstants.VIS_CONTAINER_KEY);
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, dataSource, log );
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, Dataset, log );
Set<Grant> piGrants = queryManager.getQueryResult();
@ -127,7 +127,7 @@ public class PersonGrantCountRequestHandler implements VisualizationRequestHandl
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String personURI = vitroRequest
@ -139,7 +139,7 @@ public class PersonGrantCountRequestHandler implements VisualizationRequestHandl
String visContainer = vitroRequest
.getParameter(VisualizationFrameworkConstants.VIS_CONTAINER_KEY);
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, dataSource, log );
QueryRunner<Set<Grant>> queryManager = new PersonGrantCountQueryRunner(personURI, Dataset, log );
Set<Grant> piGrants = queryManager.getQueryResult();

16
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/personlevel/PersonLevelRequestHandler.java
View file

@ -12,7 +12,7 @@ import javax.servlet.http.HttpServletRequest;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.rdf.model.Model;
import edu.cornell.mannlib.vitro.webapp.beans.Portal;
@ -60,13 +60,13 @@ public class PersonLevelRequestHandler implements VisualizationRequestHandler {
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Person Level does not provide Ajax Response.");
}
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Person Level does not provide Data Response.");
}
@ -74,7 +74,7 @@ public class PersonLevelRequestHandler implements VisualizationRequestHandler {
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String egoURI = vitroRequest.getParameter(
@ -86,12 +86,12 @@ public class PersonLevelRequestHandler implements VisualizationRequestHandler {
if (VisualizationFrameworkConstants.COPI_VIS_MODE.equalsIgnoreCase(visMode)){
CoPIGrantCountConstructQueryRunner constructQueryRunner = new CoPIGrantCountConstructQueryRunner(egoURI, dataSource, log);
CoPIGrantCountConstructQueryRunner constructQueryRunner = new CoPIGrantCountConstructQueryRunner(egoURI, Dataset, log);
Model constructedModel = constructQueryRunner.getConstructedModel();
QueryRunner<CoPIData> coPIQueryManager = new CoPIGrantCountQueryRunner(egoURI, constructedModel, log);
QueryRunner<Set<Grant>> grantQueryManager = new PersonGrantCountQueryRunner(egoURI, dataSource, log);
QueryRunner<Set<Grant>> grantQueryManager = new PersonGrantCountQueryRunner(egoURI, Dataset, log);
CoPIData coPIData = coPIQueryManager.getQueryResult();
@ -146,9 +146,9 @@ public class PersonLevelRequestHandler implements VisualizationRequestHandler {
} else {
QueryRunner<CoAuthorshipData> coAuthorshipQueryManager = new CoAuthorshipQueryRunner(egoURI, dataSource, log);
QueryRunner<CoAuthorshipData> coAuthorshipQueryManager = new CoAuthorshipQueryRunner(egoURI, Dataset, log);
QueryRunner<Set<BiboDocument>> publicationQueryManager = new PersonPublicationCountQueryRunner(egoURI, dataSource, log);
QueryRunner<Set<BiboDocument>> publicationQueryManager = new PersonPublicationCountQueryRunner(egoURI, Dataset, log);
CoAuthorshipData coAuthorshipData = coAuthorshipQueryManager.getQueryResult();

41
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/personpubcount/PersonPublicationCountConstructQueryRunner.java Normal file
View file

@ -0,0 +1,41 @@
/* $This file is distributed under the terms of the license in /doc/license.txt$ */
package edu.cornell.mannlib.vitro.webapp.visualization.freemarker.personpubcount;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Syntax;
public class PersonPublicationCountConstructQueryRunner {
protected static final Syntax SYNTAX = Syntax.syntaxARQ;
private String egoURI;
private Dataset Dataset;
private Log log = LogFactory.getLog(PersonPublicationCountConstructQueryRunner.class.getName());
private long before, after;
public PersonPublicationCountConstructQueryRunner(String egoURI, Dataset Dataset, Log log){
this.egoURI = egoURI;
this.Dataset = Dataset;
//this.log = log;
}
private String generateConstructQueryForAuthorLabel(String queryURI) {
String sparqlQuery =
"CONSTRUCT { "
+ "<"+queryURI+ "> rdfs:label ?authorLabel ."
+ "}"
+ "WHERE {"
+ "<"+queryURI+ "> rdfs:label ?authorLabel ."
+ "}";
return sparqlQuery;
}
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/personpubcount/PersonPublicationCountQueryRunner.java
View file

@ -11,7 +11,7 @@ import org.apache.commons.logging.Log;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -41,7 +41,7 @@ public class PersonPublicationCountQueryRunner implements QueryRunner<Set<BiboDo
protected static final Syntax SYNTAX = Syntax.syntaxARQ;
private String personURI;
private DataSource dataSource;
private Dataset Dataset;
private Individual author;
@ -71,10 +71,10 @@ public class PersonPublicationCountQueryRunner implements QueryRunner<Set<BiboDo
+ "OPTIONAL { ?document vitro:description ?documentDescription }\n";
public PersonPublicationCountQueryRunner(String personURI,
DataSource dataSource, Log log) {
Dataset Dataset, Log log) {
this.personURI = personURI;
this.dataSource = dataSource;
this.Dataset = Dataset;
this.log = log;
}
@ -143,11 +143,11 @@ public class PersonPublicationCountQueryRunner implements QueryRunner<Set<BiboDo
}
private ResultSet executeQuery(String queryURI,
DataSource dataSource) {
Dataset Dataset) {
QueryExecution queryExecution = null;
Query query = QueryFactory.create(getSparqlQuery(queryURI), SYNTAX);
queryExecution = QueryExecutionFactory.create(query, dataSource);
queryExecution = QueryExecutionFactory.create(query, Dataset);
return queryExecution.execSelect();
}
@ -192,7 +192,7 @@ public class PersonPublicationCountQueryRunner implements QueryRunner<Set<BiboDo
}
ResultSet resultSet = executeQuery(this.personURI,
this.dataSource);
this.Dataset);
return createJavaValueObjects(resultSet);
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/personpubcount/PersonPublicationCountRequestHandler.java
View file

@ -16,7 +16,7 @@ import org.apache.commons.lang.StringEscapeUtils;
import org.apache.commons.lang.StringUtils;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.itextpdf.text.Document;
import com.itextpdf.text.DocumentException;
import com.itextpdf.text.pdf.PdfWriter;
@ -54,7 +54,7 @@ VisualizationRequestHandler {
@Override
public Object generateAjaxVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
String personURI = vitroRequest
.getParameter(
@ -70,7 +70,7 @@ VisualizationRequestHandler {
QueryRunner<Set<BiboDocument>> queryManager = new PersonPublicationCountQueryRunner(
personURI,
dataSource,
Dataset,
log);
Set<BiboDocument> authorDocuments = queryManager.getQueryResult();
@ -108,14 +108,14 @@ VisualizationRequestHandler {
@Override
public Map<String, String> generateDataVisualization(VitroRequest vitroRequest, Log log,
DataSource dataSource) throws MalformedQueryParametersException {
Dataset Dataset) throws MalformedQueryParametersException {
String personURI = vitroRequest
.getParameter(VisualizationFrameworkConstants.INDIVIDUAL_URI_KEY);
QueryRunner<Set<BiboDocument>> queryManager = new PersonPublicationCountQueryRunner(
personURI,
dataSource,
Dataset,
log);
Set<BiboDocument> authorDocuments = queryManager.getQueryResult();
@ -137,7 +137,7 @@ VisualizationRequestHandler {
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
String personURI = vitroRequest.getParameter(
@ -151,7 +151,7 @@ VisualizationRequestHandler {
QueryRunner<Set<BiboDocument>> queryManager = new PersonPublicationCountQueryRunner(
personURI,
dataSource,
Dataset,
log);
Set<BiboDocument> authorDocuments = queryManager.getQueryResult();

18
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/utilities/UtilitiesRequestHandler.java
View file

@ -12,7 +12,7 @@ import com.google.gson.Gson;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.QuerySolution;
import com.hp.hpl.jena.query.ResultSet;
import com.hp.hpl.jena.rdf.model.RDFNode;
@ -46,7 +46,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
public Object generateAjaxVisualization(VitroRequest vitroRequest,
Log log,
DataSource dataSource)
Dataset Dataset)
throws MalformedQueryParametersException {
String individualURI = vitroRequest.getParameter(
@ -70,7 +70,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
QueryRunner<GenericQueryMap> profileQueryHandler =
new AllPropertiesQueryRunner(individualURI,
filterRule,
dataSource,
Dataset,
log);
GenericQueryMap profilePropertiesToValues =
@ -105,7 +105,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
"",
whereClause,
"",
dataSource, log);
Dataset, log);
return getThumbnailInformation(imageQueryHandler.getQueryResult(),
fieldLabelToOutputFieldLabel);
@ -127,7 +127,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
aggregationRules,
whereClause,
groupOrderClause,
dataSource, log);
Dataset, log);
Gson publicationsInformation = new Gson();
@ -155,7 +155,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
aggregationRules,
whereClause,
"",
dataSource, log);
Dataset, log);
Gson grantsInformation = new Gson();
@ -268,7 +268,7 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
aggregationRules,
whereClause,
groupOrderClause,
dataSource, log);
Dataset, log);
return getHighestLevelOrganizationTemporalGraphVisURL(
highestLevelOrganizationQueryHandler.getQueryResult(),
@ -395,14 +395,14 @@ public class UtilitiesRequestHandler implements VisualizationRequestHandler {
@Override
public Map<String, String> generateDataVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Utilities does not provide Data Response.");
}
@Override
public ResponseValues generateStandardVisualization(
VitroRequest vitroRequest, Log log, DataSource dataSource)
VitroRequest vitroRequest, Log log, Dataset Dataset)
throws MalformedQueryParametersException {
throw new UnsupportedOperationException("Utilities does not provide Standard Response.");
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/visutils/AllPropertiesQueryRunner.java
View file

@ -8,7 +8,7 @@ import org.apache.commons.logging.Log;
import com.hp.hpl.jena.iri.IRI;
import com.hp.hpl.jena.iri.IRIFactory;
import com.hp.hpl.jena.iri.Violation;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -36,18 +36,18 @@ public class AllPropertiesQueryRunner implements QueryRunner<GenericQueryMap> {
protected static final Syntax SYNTAX = Syntax.syntaxARQ;
private String filterRule, individualURI;
private DataSource dataSource;
private Dataset Dataset;
private Log log;
public AllPropertiesQueryRunner(String individualURI,
String filterRule,
DataSource dataSource,
Dataset Dataset,
Log log) {
this.individualURI = individualURI;
this.filterRule = filterRule;
this.dataSource = dataSource;
this.Dataset = Dataset;
this.log = log;
}
@ -74,12 +74,12 @@ public class AllPropertiesQueryRunner implements QueryRunner<GenericQueryMap> {
}
private ResultSet executeQuery(String queryText,
DataSource dataSource) {
Dataset Dataset) {
QueryExecution queryExecution = null;
Query query = QueryFactory.create(queryText, SYNTAX);
queryExecution = QueryExecutionFactory.create(query, dataSource);
queryExecution = QueryExecutionFactory.create(query, Dataset);
return queryExecution.execSelect();
}
@ -127,7 +127,7 @@ public class AllPropertiesQueryRunner implements QueryRunner<GenericQueryMap> {
ResultSet resultSet = executeQuery(generateGenericSparqlQuery(
this.individualURI,
this.filterRule),
this.dataSource);
this.Dataset);
return createJavaValueObjects(resultSet);
}

14
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/visutils/GenericQueryRunner.java
View file

@ -6,7 +6,7 @@ import java.util.Map;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import com.hp.hpl.jena.query.Query;
import com.hp.hpl.jena.query.QueryExecution;
import com.hp.hpl.jena.query.QueryExecutionFactory;
@ -30,7 +30,7 @@ public class GenericQueryRunner implements QueryRunner<ResultSet> {
protected static final Syntax SYNTAX = Syntax.syntaxARQ;
private String whereClause;
private DataSource dataSource;
private Dataset Dataset;
private Log log;
@ -44,23 +44,23 @@ public class GenericQueryRunner implements QueryRunner<ResultSet> {
String aggregationRules,
String whereClause,
String groupOrderClause,
DataSource dataSource, Log log) {
Dataset Dataset, Log log) {
this.fieldLabelToOutputFieldLabel = fieldLabelToOutputFieldLabel;
this.aggregationRules = aggregationRules;
this.whereClause = whereClause;
this.groupOrderClause = groupOrderClause;
this.dataSource = dataSource;
this.Dataset = Dataset;
this.log = log;
}
private ResultSet executeQuery(String queryText,
DataSource dataSource) {
Dataset Dataset) {
QueryExecution queryExecution = null;
Query query = QueryFactory.create(queryText, SYNTAX);
queryExecution = QueryExecutionFactory.create(query, dataSource);
queryExecution = QueryExecutionFactory.create(query, Dataset);
return queryExecution.execSelect();
}
@ -96,7 +96,7 @@ public class GenericQueryRunner implements QueryRunner<ResultSet> {
throws MalformedQueryParametersException {
ResultSet resultSet = executeQuery(generateGenericSparqlQuery(),
this.dataSource);
this.Dataset);
return resultSet;
}

7
src/edu/cornell/mannlib/vitro/webapp/visualization/freemarker/visutils/VisualizationRequestHandler.java
View file

@ -6,6 +6,7 @@ import java.util.Map;
import org.apache.commons.logging.Log;
import com.hp.hpl.jena.query.DataSource;
import com.hp.hpl.jena.query.Dataset;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ResponseValues;
@ -25,14 +26,14 @@ public interface VisualizationRequestHandler{
ResponseValues generateStandardVisualization(VitroRequest vitroRequest,
Log log,
DataSource dataSource) throws MalformedQueryParametersException;
Dataset dataSource) throws MalformedQueryParametersException;
Object generateAjaxVisualization(VitroRequest vitroRequest,
Log log,
DataSource dataSource) throws MalformedQueryParametersException;
Dataset dataSource) throws MalformedQueryParametersException;
Map<String, String> generateDataVisualization(VitroRequest vitroRequest,
Log log,
DataSource dataSource) throws MalformedQueryParametersException;
Dataset dataSource) throws MalformedQueryParametersException;
}