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+
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+
+
+
+
+
+
+
+
+ 2010-05-01
+ United Nations cartographic maps
+ United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
+ http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2010-05-01
+ United Nations cartographic maps
+ United Nations cartographic maps http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
+ http://www.un.org/Depts/Cartographic/map/profile/world00.pdf
+
+
+
+
+
+
+
+
+
+
+
+
+
+ 2010-04-15
+ United Nations Statistics Division
+ United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
+ http://unstats.un.org/unsd/methods/m49/m49chang.htm
+ http://unstats.un.org/unsd/methods/m49/m49chgef.htm
+
+
+
+
+
+
+
+ 2010-04-15
+ United Nations Statistics Division
+ United Nations Statistics Division http://unstats.un.org/unsd/methods/m49/m49chang.htm
+ http://unstats.un.org/unsd/methods/m49/m49chang.htm
+ http://unstats.un.org/unsd/methods/m49/m49chgef.htm
+
+
+
+
+
+
+
+ relevant_for
+
+
+
+
+
+
+
+
+
+ has_contact_info
+
+
+
+
+
+
+
+
+ contact_info_for
+
+
+
+
+
+
+
+
+
+ context_for
+
+
+
+
+
+
+
+
+ has_context
+
+
+
+
+
+
+
+ url_link_for
+
+
+
+
+
+
+
+
+ has_url_link
+
+
+
+
+
+
+
+ has contact agent
+
+
+
+
+
+
+
+
+ part_of
+
+
+
+
+
+
+
+
+ has_part
+
+
+
+
+
+
+
+
+ has measurement unit label
+
+
+
+
+
+
+
+
+
+ is about
+ 7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of "mentions" relation. Weaken the is_about relationship to be primitive.
+
+We will try to build it back up by elaborating the various subproperties that are more precisely defined.
+
+Some currently missing phenomena that should be considered "about" are predications - "The only person who knows the answer is sitting beside me" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic.
+ Smith, Ceusters, Ruttenberg, 2000 years of philosophy
+ This document is about information artifacts and their representations
+ is_about is a (currently) primitive relation that relates an information artifact to an entity.
+ person:Alan Ruttenberg
+
+
+
+
+
+
+
+
+
+ mentions
+
+
+
+
+
+
+
+
+ is quality measurement of
+ 8/6/2009 Alan Ruttenberg: The strategy is to be rather specific with this relationship. There are other kinds of measurements that are not of qualities, such as those that measure time. We will add these as separate properties for the moment and see about generalizing later
+ Alan Ruttenberg
+ From the second IAO workshop [Alan Ruttenberg 8/6/2009: not completely current, though bringing in comparison is probably important]
+
+This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail.
+
+Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details.
+--
+From the second IAO workshop, various comments, [commented on by Alan Ruttenberg 8/6/2009]
+
+unit of measure is a quality, e.g. the length of a ruler.
+
+[We decided to hedge on what units of measure are, instead talking about measurement unit labels, which are the information content entities that are about whatever measurement units are. For IAO we need that information entity in any case. See the term measurement unit label]
+
+[Some struggling with the various subflavors of is_about. We subsequently removed the relation represents, and describes until and only when we have a better theory]
+
+a represents b means either a denotes b or a describes
+
+describe:
+a describes b means a is about b and a allows an inference of at least one quality of b
+
+We have had a long discussion about denotes versus describes.
+ From the second IAO workshop: An attempt at tieing the quality to the measurement datum more carefully.
+
+a is a magnitude means a is a determinate quality particular inhering in some bearer b existing at a time t that can be represented/denoted by an information content entity e that has parts denoting a unit of measure, a number, and b. The unit of measure is an instance of the determinable quality.
+ From the second meeting on IAO:
+
+An attempt at defining assay using Barry's "reliability" wording
+
+assay:
+process and has_input some material entity
+and has_output some information content entity
+and which is such that instances of this process type reliably generate
+outputs that describes the input.
+ This one is the one we are struggling with at the moment. The issue is what a measurement measures. On the one hand saying that it measures the quality would include it "measuring" the bearer = referring to the bearer in the measurement. However this makes comparisons of two different things not possible. On the other hand not having it inhere in the bearer, on the face of it, breaks the audit trail.
+
+Werner suggests a solution based on "Magnitudes" a proposal for which we are awaiting details.
+ m is a quality measurement of q at t when
+q is a quality
+there is a measurement process p that has specified output m, a measurement datum, that is about q
+
+
+
+
+
+
+
+
+
+
+ is quality measured as
+ 2009/10/19 Alan Ruttenberg. Named 'junk' relation useful in restrictions, but not a real instance relationship
+ Person:Alan Ruttenberg
+ inverse of the relation of is quality measurement of
+
+
+
+
+
+
+
+
+
+ has_specified_input
+ 8/17/09: specified inputs of one process are not necessarily specified inputs of a larger process that it is part of. This is in contrast to how 'has participant' works.
+ PERSON: Bjoern Peters
+ PERSON: Larry Hunter
+ PERSON: Melanie Coutot
+ has_specified_input
+ A relation between a planned process and a continuant participating in that process that is not created during the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of.
+ PERSON: Alan Ruttenberg
+ see is_input_of example_of_usage
+
+
+
+
+
+
+
+
+
+ has_specified_output
+ PERSON: Bjoern Peters
+ PERSON: Larry Hunter
+ PERSON: Melanie Courtot
+ has_specified_output
+ A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
+ PERSON: Alan Ruttenberg
+
+
+
+
+
+
+
+
+
+
+ is_realized_by
+ GROUP:OBI:<http://obi.sourceforge.net>
+ PERSON: Chris Mungall
+ Relation between a realizable and a process. Reciprocal relation of realizes [GOC:cjm]
+ executed_during
+ has_realization
+ is_realized_as
+
+
+
+
+
+
+
+
+
+
+ is_manufactured_by
+ Alan Ruttenberg
+ Liju Fan
+ c is_manufactured_by o means that there was a process p in which c was built in which a person, or set of people or machines did the work(bore the "Manufacturer Role", and those people/and or machines were members or of directed by the organization to do this.
+ has_make
+ has_manufacturer
+ http://www.affymetrix.com/products/arrays/specific/hgu133.affx is_manufactered_by http://www.affymetrix.com/ (if we decide to use these URIs for the actual entities)
+ is_manufactured_by
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_function
+ GROUP:OBI:<http://obi.sourceforge.net>
+ PERSON: Chris Mungall
+ Relation between an independent continuant and a function.
+ has_function
+ heart has_function to-pump-blood
+
+
+
+
+
+
+
+
+
+
+
+ realizes
+ GROUP:OBI:<http://obi.sourceforge.net>
+ PERSON: Chris Mungal
+ Relation between a process and a function, where the unfolding of the
+process requires the execution of the function. Class level: P realizes F iff:
+given any p that instantiates P, there exists some f, t such that f instantiates
+ F at t and p *realizes* f. Here, *realizes* is the primitive
+instance level relation [GOC:cjm]
+ example of usage: The process of 'histidine catabolism' (GO:0006548) realizes the
+function 'histidine ammonia lyase activity' (GO:0004397) (note: here 'activity'
+denotes a function and not a process). We leave open the possibility of defining
+in future the sub-relations directly_realizes (as bewteen a function and it's
+functioning) and indirectly_realizes.
+ executes
+ has_function_part
+ involves_execution_of
+ is_realization_of
+ realizes
+
+
+
+
+
+
+
+
+
+
+
+ is_specified_output_of
+ PERSON:Bjoern Peters
+ is_specified_output_of
+ A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
+ Alan Ruttenberg
+
+
+
+
+
+
+
+
+
+ has_role
+ A relation between a continuant C and a role R. The reciprocal relation of role_of.
+ GROUP:OBI:<http://obi.sourceforge.net>
+ PERSON:Chris Mungal
+ has_role
+
+
+
+
+
+
+
+
+
+
+
+ achieves_planned_objective
+ A cell sorting process achieves the objective specification 'material separation objective'
+ BP, AR, PPPB branch
+ PPPB branch derived
+ This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process.
+ modified according to email thread from 1/23/09 in accordince with DT and PPPB branch
+
+
+
+
+
+
+
+
+
+ has grain
+ PAPER: Granularity, scale and collectivity: When size does and does not matter, Alan Rector, Jeremy Rogers, Thomas Bittner, Journal of Biomedical Informatics 39 (2006) 333-349
+ has grain
+ the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car.
+ Discussion in Karslruhe with, among others, Alan Rector, Stefan Schulz, Marijke Keet, Melanie Courtot, and Alan Ruttenberg. Definition take from the definition of granular parthood in the cited paper. Needs work to put into standard form
+ PERSON: Alan Ruttenberg
+
+
+
+
+
+
+
+
+
+ objective_achieved_by
+ This relation obtains between a a objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process.
+ definition needs clean up to indicate directionality
+
+
+
+
+
+
+
+
+
+
+
+ inheres in
+ This clarifies that only specifically dependent continuants inhere in (specifically) one independent continuant over all time. For GDCs, there in implicitly inherence to all the independent continuants in which the concretizations inhere. Should add a 'cardinality 1' restriction to the definition of specifically dependent continuant.
+ This relation belongs in BFO/RO, and will be in BFO 2
+
+
+
+
+
+
+
+
+
+
+ bearer_of
+
+
+
+
+
+
+
+ participates in
+
+
+
+
+
+
+
+ has participant
+
+
+
+
+
+
+
+ derives from (ro)
+
+
+
+
+
+
+
+ location of
+
+
+
+
+
+
+
+ contained in
+
+
+
+
+
+
+
+ contains
+
+
+
+
+
+
+
+ located in
+
+
+
+
+
+
+
+ adjacent to
+
+
+
+
+
+
+
+ has input
+
+
+
+
+
+
+
+
+ has output
+
+
+
+
+
+
+
+
+ member of
+
+
+
+
+
+
+
+ has_member
+
+
+
+
+
+
+
+
+
+ output_of
+
+
+
+
+
+
+
+
+ produces
+ Melissa Haendel
+ a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.
+
+
+
+
+
+
+
+
+
+
+ produced_by
+
+
+
+
+
+
+
+
+
+
+ is agent in
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ role_of
+ A relation between a role R and an entity E. R role_of E iff: R inheres_in E and R is a role
+ GROUP:OBI:<http://obi.sourceforge.net>
+ PERSON: Chris Mungall
+ role_of
+
+
+
+
+
+
+
+
+
+
+ affirmedby
+ The public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/ontology/bibo/
+ A legal decision that affirms a ruling.
+
+
+
+
+
+
+
+ annotates
+ The public description source is: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html.
+ http://purl.org/ontology/bibo/
+ stable
+ Critical or explanatory note for a Document.
+
+
+
+
+
+
+
+ cited by
+
+
+
+
+
+
+
+ cites
+
+
+
+
+
+
+
+ court
+ Public description take from: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this property "unstable".
+ http://purl.org/ontology/bibo/
+ unstable
+ A court associated with a legal document; for example, that which issues a decision.
+
+
+
+
+
+
+
+ related degree
+ The source of the public description and this info is found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html. Bibo considers this term "unstable". The bibo editorial note is: "We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen."
+ http://purl.org/ontology/bibo/
+ The thesis degree.
+ We are not defining, using an enumeration, the range of the bibo:degree to the defined list of bibo:ThesisDegree. We won't do it because we want people to be able to define new degress if needed by some special usecases. Creating such an enumeration would restrict this to happen.
+ unstable
+
+
+
+
+
+
+
+ director
+ Definition take from this site: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
+ http://purl.org/ontology/bibo/
+ A Film director.
+ stable
+
+
+
+
+
+
+
+ interviewee
+ http://purl.org/ontology/bibo/
+ stable
+ An agent that is interviewed by another agent.
+
+
+
+
+
+
+
+ interviewer
+ http://purl.org/ontology/bibo/
+ stable
+ An agent that interview another agent.
+
+
+
+
+
+
+
+ performer
+ http://purl.org/ontology/bibo/
+ stable
+
+
+
+
+
+
+
+ related documents
+ Public Description from source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers the bibo:presents and the bibo:presentedAt unstable terms. It also indicates that bibo:presents is a sub-property of event:product.
+ http://purl.org/ontology/bibo/
+ Relates an event to associated documents; for example, conference to a paper.
+ unstable
+
+
+
+
+
+
+
+ recipient
+ http://purl.org/ontology/bibo/
+ stable
+ An agent that receives a communication document.
+
+
+
+
+
+
+
+ reproduced in
+
+
+
+
+
+
+
+ reversedby
+ The first sentence of the public description was taken from here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/ontology/bibo/
+ A legal decision that reverses a ruling.
+
+
+
+
+
+
+
+ review of
+ The bibo:reviewOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . As of 26 May 2010, bibo:reviewOf is used with the class Review, but core:reviewIn doesn't seem to be being used.
+
+
+
+
+
+
+
+ status
+ paraphrased editorial note from the bibo ontology: We are not defining, using an enumeration, the range of the bibo:status to be a defined list of bibo:DocumentStatus. This is because we want people to be able to define new statuses if needed; and creating such an enumeration would prevent this.
+
+
+
+
+
+
+
+ subsequentlegaldecision
+ Public description is from comments of this object property in bibo ontology located here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html
+ http://purl.org/ontology/bibo/
+ A legal decision on appeal that takes action on a case (affirming it, reversing it, etc.).
+
+
+
+
+
+
+
+ transcript of
+ The bibo:transcriptOf public description was found here: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html . Bibo considers this term unstable.
+ http://purl.org/ontology/bibo/
+ Relates a document to some transcribed original.
+ unstable
+
+
+
+
+
+
+
+ translation of
+ Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
+ http://purl.org/ontology/bibo/
+ Relates a translated document to the original document.
+ stable
+
+
+
+
+
+
+
+ translator
+
+
+
+
+
+
+
+ has_global_citation_frequency
+ A property linking a publication entity to an instance of c40:GlobalCitationCount that specifies how many times a work has been cited by others, according to a particular information source on a particular date.
+
+
+
+
+
+
+
+ has global count source
+ A property linking an instance of c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.
+
+
+
+
+
+
+
+ assigned by
+ Relates a Relationship (as a predicate or n-ary relation over one or more Thing) to an Agent that defined or instantiated the predicate instance.
+
+
+
+
+
+
+
+ assigns
+
+
+
+
+
+
+
+ date filed
+
+
+
+
+
+
+
+
+
+
+ date issued
+
+
+
+
+
+
+
+
+
+ has date/time interval
+
+
+
+
+
+
+
+
+ date/time precision
+
+
+
+
+
+
+
+
+ date/time value
+
+
+
+
+
+
+
+
+ end date value
+
+
+
+
+
+
+
+
+
+
+ expiration date
+
+
+
+
+
+
+
+
+ features
+ This is done through a restriction on the foaf:Person class.
+
+
+
+
+
+
+
+ geographic focus
+
+
+
+
+
+
+
+
+ geographic focus of
+
+
+
+
+
+
+
+
+ geographic_location_of
+
+
+
+
+
+
+
+ subcontracted through
+
+
+
+
+
+
+
+
+
+ associated concept
+
+
+
+
+
+
+
+ has geographic location
+ Currently being used by a restriction on organization.
+
+
+
+
+
+
+
+
+ has prerequisite
+
+
+
+
+
+
+
+
+
+ published in
+
+
+
+
+
+
+
+ successor organization
+
+
+
+
+
+
+
+
+
+ has translation
+ Examples shows a book has French language version. Public description source: http://bibotools.googlecode.com/svn/bibo-ontology/trunk/doc/index.html .
+
+
+
+
+
+
+
+ offered by
+
+
+
+
+
+
+
+ offers
+
+
+
+
+
+
+
+ prerequisite for
+
+
+
+
+
+
+
+
+
+ provides funding through
+ For example, National Science Foundation providesFundingThrough Graduate Research Fellowship Program; National Institutes of Health providesFundingThrough National Center for Research Resources.
+
+
+
+
+
+
+
+
+
+ publication venue for
+
+
+
+
+
+
+
+ publisher (vivo op)
+ Public Definition source (http://www.answers.com/topic/publisher).
+
+
+
+
+
+
+
+
+ publisher of
+ Public Definition source (http://www.answers.com/topic/publisher).
+
+
+
+
+
+
+
+
+ related by
+ Relates a Thing to a Relationship as a Thing that is somehow related to other Thing in the same Relationship instance. A Relationship instnace is a predicate over Thing and is created by an Agent.
+
+
+
+
+
+
+
+ relates
+ Relates a Relationship instance to the one or more Thing of the Relationship. There is a separate property (assigned by) to relate to the Agent that defines the Relationship.
+
+
+
+
+
+
+
+ reviewed_in
+
+
+
+
+
+
+
+ start date value
+
+
+
+
+
+
+
+
+
+
+ subcontracts grant
+
+
+
+
+
+
+
+
+
+ translator of
+
+
+
+
+
+
+
+ access provided by
+
+
+
+
+
+
+
+ documentation for
+
+
+
+
+
+
+
+ protocol realized by
+
+
+
+
+
+
+
+ implements
+
+
+
+
+
+
+
+ is_encoded_in
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has_agent
+
+
+
+
+
+
+
+ deprecatedproperty
+
+
+
+
+
+
+
+
+
+
+
+
+
+ broader term
+ Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
+
+
+
+
+
+
+
+ narrower term
+ Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .
+
+
+
+
+
+
+
+ related (skos)
+
+
+
+
+
+
+
+ has address
+
+
+
+
+
+
+
+
+ has calendar link
+
+
+
+
+
+
+
+
+ has calendar request
+
+
+
+
+
+
+
+
+ has calender busy
+
+
+
+
+
+
+
+
+ has category
+
+
+
+
+
+
+
+
+ has email
+
+
+
+
+
+
+
+
+ has formatted name
+
+
+
+
+
+
+
+
+ has geo
+
+
+
+
+
+
+
+
+ has messaging
+
+
+
+
+
+
+
+
+ has key
+
+
+
+
+
+
+
+
+ has language (vcard op)
+
+
+
+
+
+
+
+
+ has logo
+
+
+
+
+
+
+
+
+ member
+ To include a member in the group this vCard represents
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ has name
+
+
+
+
+
+
+
+
+ has nickname
+
+
+
+
+
+
+
+
+ has note
+
+
+
+
+
+
+
+
+ has organization name
+
+
+
+
+
+
+
+
+ has organisational unit name
+
+
+
+
+
+
+
+
+ has photo
+
+
+
+
+
+
+
+
+ has related (vcard op)
+
+
+
+
+
+
+
+
+ has role
+
+
+
+
+
+
+
+
+ has sound
+
+
+
+
+
+
+
+
+ has telephone
+
+
+
+
+
+
+
+
+ has time zone
+
+
+
+
+
+
+
+
+ has title
+
+
+
+
+
+
+
+
+ has url
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ realizable_entity
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ research project
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ monoclonal antibody reagent
+
+
+
+
+
+
+
+ construct
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ viral plasmid
+
+
+
+
+
+
+
+ nucleic acid reagent
+
+
+
+
+
+
+
+
+
+
+
+
+
+ non viral organism
+
+
+
+
+
+
+
+ reagent library
+
+
+
+
+
+
+
+ gene knockdown reagent
+
+
+
+
+
+
+
+ hybridoma cell line
+
+
+
+
+
+
+
+ immunotechnique
+
+
+
+
+
+
+
+ material antibody target
+
+
+
+
+
+
+
+ biological target
+
+
+
+
+
+
+
+ immunogenic material
+
+
+
+
+
+
+
+ data
+
+
+
+
+
+
+
+ biospecimen preparation
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ objective specification
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ mammalian phenotype
+
+
+
+
+
+
+
+
+
+
+
+
+
+ homo sapiens
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ microarray
+
+
+
+
+
+
+
+ disease
+
+
+
+
+
+
+
+ pato quality
+
+
+
+
+
+
+
+
+
+
+
+
+
+ anatomical entity
+
+
+
+
+
+
+
+ event
+
+
+
+
+
+
+
+ phase (ocre)
+
+
+
+
+
+
+
+
+
+
+
+
+
+ patent
+
+
+
+
+
+
+
+ association
+
+
+
+
+
+
+
+ center
+
+
+
+
+
+
+
+ consortium
+
+
+
+
+
+
+
+ core laboratory
+
+
+
+
+
+
+
+ course
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ foundation
+
+
+
+
+
+
+
+ funding organization
+
+
+
+
+
+
+
+ geographic location
+
+
+
+
+
+
+
+ geographic region
+
+
+
+
+
+
+
+ grant
+
+
+
+
+
+
+
+ institute
+
+
+
+
+
+
+
+ laboratory
+
+
+
+
+
+
+
+ library
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+ agent
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
diff --git a/productMods/WEB-INF/filegraph/tbox/vivo.owl b/productMods/WEB-INF/filegraph/tbox/vivo.owl
index f40fa8f8..4a3dd43c 100644
--- a/productMods/WEB-INF/filegraph/tbox/vivo.owl
+++ b/productMods/WEB-INF/filegraph/tbox/vivo.owl
@@ -49,134 +49,6 @@
-
-
-
- part_of (RO)
-
-
-
-
-
-
-
- has_part (RO)
-
-
-
-
-
-
-
- inheres in
-
-
-
-
-
-
-
- bearer of
-
-
-
-
-
-
-
-
- participates in
-
-
-
-
-
-
-
- has participant
-
-
-
-
-
-
-
- is about
-
-
-
-
-
-
-
- location of
-
-
-
-
-
-
-
-
- located in
-
-
-
-
-
-
-
- has input
-
-
-
-
-
-
-
-
- has output
-
-
-
-
-
-
-
-
- member of
-
-
-
-
-
-
-
-
- has member
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
diff --git a/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3 b/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3
index 5dc1150d..1a99c7fc 100644
--- a/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3
+++ b/productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3
@@ -40,10 +40,10 @@ local:authorInAuthorshipConfig a :ObjectPropertyDisplayConfig ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator"^^xsd:string ;
:propertyGroup .
- a :ConfigContext ;
+ a :ConfigContext ;
:hasConfiguration ;
- :configContextFor ;
- :qualifiedBy .
+ :configContextFor ;
+ :qualifiedBy .
a :ObjectPropertyDisplayConfig ;
@@ -54,17 +54,3 @@ local:authorInAuthorshipConfig a :ObjectPropertyDisplayConfig ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddServiceProviderRoleToPersonGenerator"^^ ;
:propertyGroup .
-
- a :ConfigContext ;
- :hasConfiguration ;
- :configContextFor ;
- :qualifiedBy .
-
-
- a :ObjectPropertyDisplayConfig ;
- :displayName "resident of awesome country" ;
- vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
- vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
- :propertyGroup .
-
-