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latest ontology

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stellamit 2011-10-27 21:25:57 +00:00
parent 55eea37ee6
commit 85299f62f6
4 changed files with 2702 additions and 2689 deletions
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12
productMods/WEB-INF/filegraph/tbox/scires-1.4.owl
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@ -13,11 +13,6 @@
xmlns:j.5="http://purl.org/dc/terms/" xmlns:j.5="http://purl.org/dc/terms/"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" > xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:nodeID="A0">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Restriction"/>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/ERO_0000460"/>
<owl:allValuesFrom rdf:resource="http://purl.org/ontology/bibo/Document"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/"> <rdf:Description rdf:about="http://purl.obolibrary.org/obo/">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Ontology"/> <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Ontology"/>
</rdf:Description> </rdf:Description>
@ -135,11 +130,16 @@ NOTE that we are not addressing for now the issue of whether a foaf:Person is a
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. <vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
</vitro:descriptionAnnot> </vitro:descriptionAnnot>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:nodeID="A0">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Restriction"/>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/ERO_0000460"/>
<owl:allValuesFrom rdf:resource="http://purl.org/ontology/bibo/Document"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000004"> <rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000004">
<rdfs:subClassOf rdf:nodeID="A0"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/> <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An implement used to facilitate work, especially precision work.</vitro:descriptionAnnot> <vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An implement used to facilitate work, especially precision work.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An implement used to facilitate work, especially precision work.</vitro:shortDef> <vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An implement used to facilitate work, especially precision work.</vitro:shortDef>
<rdfs:subClassOf rdf:nodeID="A0"/>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Equipment"/> <rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Equipment"/>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000029"> <rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000029">

2668
productMods/WEB-INF/filegraph/tbox/vivo-core-1.4.owl
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2688
productMods/WEB-INF/ontologies/public/vivo-core-public-1.4.owl
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23
productMods/WEB-INF/ontologies/user/tbox/vivo-core-1.4-annotations.rdf
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@ -265,11 +265,11 @@
<rdfs:label xml:lang="en-US">place of publication</rdfs:label> <rdfs:label xml:lang="en-US">place of publication</rdfs:label>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#address1"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#address1">
<rdfs:label xml:lang="en-US">address1</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<rdfs:label xml:lang="en-US">address line 1</rdfs:label>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#offersDegree"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#offersDegree">
<vitro:fullPropertyNameAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">offers degree</vitro:fullPropertyNameAnnot> <vitro:fullPropertyNameAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">offers degree</vitro:fullPropertyNameAnnot>
@ -961,11 +961,11 @@
<vitro:extendedLinkedData rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:extendedLinkedData> <vitro:extendedLinkedData rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:extendedLinkedData>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#address2"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#address2">
<rdfs:label xml:lang="en-US">address2</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<rdfs:label xml:lang="en-US">address line 2</rdfs:label>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameShortIT"> <rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameShortIT">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
@ -1100,11 +1100,11 @@
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot> <vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#address3"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#address3">
<rdfs:label xml:lang="en-US">address3</rdfs:label> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">10</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/> <rdfs:label xml:lang="en-US">address line 3</rdfs:label>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasCo-PrincipalInvestigatorRole"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasCo-PrincipalInvestigatorRole">
<vitro:customEntryFormAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">addGrantRoleToPerson.jsp</vitro:customEntryFormAnnot> <vitro:customEntryFormAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">addGrantRoleToPerson.jsp</vitro:customEntryFormAnnot>
@ -1263,9 +1263,9 @@
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A code of letters and digits added to a postal address to aid in the sorting of mail.</vitro:publicDescriptionAnnot> <vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A code of letters and digits added to a postal address to aid in the sorting of mail.</vitro:publicDescriptionAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGrouplocation"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">1</vitro:displayLimitAnnot> <vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">1</vitro:displayLimitAnnot>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">50</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">50</vitro:displayRankAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#CoreLaboratory"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#CoreLaboratory">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
@ -1612,7 +1612,7 @@
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#addressState"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#addressState">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">state or province</rdfs:label> <rdfs:label xml:lang="en-US">state or province</rdfs:label>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGrouplocation"/> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">30</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">30</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">1</vitro:displayLimitAnnot> <vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">1</vitro:displayLimitAnnot>
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US.</vitro:publicDescriptionAnnot> <vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">One of a number of areas or communities having their own governments and forming a federation under a sovereign government, as in the US.</vitro:publicDescriptionAnnot>
@ -3554,15 +3554,16 @@
<rdfs:label xml:lang="en-US">city</rdfs:label> <rdfs:label xml:lang="en-US">city</rdfs:label>
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An incorporated municipality, usually governed by a mayor and a board of aldermen or councilmen. </vitro:publicDescriptionAnnot> <vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An incorporated municipality, usually governed by a mayor and a board of aldermen or councilmen. </vitro:publicDescriptionAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGrouplocation"/> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#contributingRole"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#contributingRole">
<rdfs:label xml:lang="en-US">contributor</rdfs:label>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">5</vitro:displayLimitAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupbiography"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">5</vitro:displayLimitAnnot>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot> <vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<rdfs:label xml:lang="en-US">contributor</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#ClinicalOrganization"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#ClinicalOrganization">
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
@ -4401,10 +4402,10 @@
<rdfs:label xml:lang="en-US">coden</rdfs:label> <rdfs:label xml:lang="en-US">coden</rdfs:label>
</rdf:Description> </rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#addressCountry"> <rdf:Description rdf:about="http://vivoweb.org/ontology/core#addressCountry">
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGrouplocation"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">country</rdfs:label> <rdfs:label xml:lang="en-US">country</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">40</vitro:displayRankAnnot> <vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">40</vitro:displayRankAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupaddress"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">3</vitro:displayLimitAnnot> <vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">3</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/> <vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An area of land distinguished by its political autonomy. Politically independent territories.</vitro:publicDescriptionAnnot> <vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">An area of land distinguished by its political autonomy. Politically independent territories.</vitro:publicDescriptionAnnot>