[VIVO-1690] - Remove trailing whitespace throughout project (#126)

* Remove trailing whitespace throughout project

Resolves: https://jira.duraspace.org/browse/VIVO-1690
** Along with: https://github.com/vivo-project/Vitro/pull/117
This commit is contained in:
Ben 2019-05-03 10:51:00 -06:00 committed by Andrew Woods
parent 48dcf87199
commit 87092cec9c
685 changed files with 26805 additions and 26805 deletions

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@ -3,7 +3,7 @@
# This file specifies the structure of the Vitro application: which modules
# are used, and what parameters they require.
#
# Most Vitro installations will not need to modify this file.
# Most Vitro installations will not need to modify this file.
#
# For most installations, only the settings in the runtime.properties file will
# be changed.
@ -15,11 +15,11 @@
# ----------------------------
#
# Describe the application by its implementing class and by references to the
# Describe the application by its implementing class and by references to the
# modules it uses.
#
#
:application
:application
a vitroWebapp:application.ApplicationImpl ,
vitroWebapp:modules.Application ;
:hasSearchEngine :instrumentedSearchEngineWrapper ;
@ -32,7 +32,7 @@
# ----------------------------
#
# Image processor module:
# Image processor module:
#
:iioImageProcessor
@ -41,25 +41,25 @@
# ----------------------------
#
# File storage module:
# File storage module:
# The PairTree-inspired implementation is the only standard option.
# It requires no parameters.
#
:ptiFileStorage
:ptiFileStorage
a vitroWebapp:filestorage.impl.FileStorageImplWrapper ,
vitroWebapp:modules.fileStorage.FileStorage .
# ----------------------------
#
# Search engine module:
# Search engine module:
# The Solr-based implementation is the only standard option, but it can be
# wrapped in an "instrumented" wrapper, which provides additional logging
# wrapped in an "instrumented" wrapper, which provides additional logging
# and more rigorous life-cycle checking.
#
:instrumentedSearchEngineWrapper
a vitroWebapp:searchengine.InstrumentedSearchEngineWrapper ,
:instrumentedSearchEngineWrapper
a vitroWebapp:searchengine.InstrumentedSearchEngineWrapper ,
vitroWebapp:modules.searchEngine.SearchEngine ;
:wraps :solrSearchEngine .
@ -69,8 +69,8 @@
# ----------------------------
#
# Search indexer module:
# There is only one standard implementation. You must specify the number of
# Search indexer module:
# There is only one standard implementation. You must specify the number of
# worker threads in the thread pool.
#
@ -78,14 +78,14 @@
a vitroWebapp:searchindex.SearchIndexerImpl ,
vitroWebapp:modules.searchIndexer.SearchIndexer ;
:threadPoolSize "10" .
# ----------------------------
#
# Content triples source module: holds data contents
# The SDB-based implementation is the default option. It reads its parameters
# from the runtime.properties file, for backward compatibility.
#
# Other implementations are based on a local TDB instance, a "standard" SPARQL
# Other implementations are based on a local TDB instance, a "standard" SPARQL
# endpoint, or a Virtuoso endpoint, with parameters as shown.
#
@ -104,7 +104,7 @@
# vitroWebapp:modules.tripleSource.ContentTripleSource ;
# # The URI of the SPARQL endpoint for your triple-store.
# :hasEndpointURI "PUT_YOUR_SPARQL_ENDPOINT_URI_HERE" ;
# # The URI to use for SPARQL UPDATE calls against your triple-store.
# # The URI to use for SPARQL UPDATE calls against your triple-store.
# :hasUpdateEndpointURI "PUT_THE UPDATE_URI_HERE" .
#:virtuosoContentTripleSource
@ -127,10 +127,10 @@
:tdbConfigurationTripleSource
a vitroWebapp:triplesource.impl.tdb.ConfigurationTripleSourceTDB ,
vitroWebapp:modules.tripleSource.ConfigurationTripleSource .
# ----------------------------
#
# TBox reasoner module:
# TBox reasoner module:
# The JFact-based implementation is the only standard option.
# It requires no parameters.
#

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@ -4,13 +4,13 @@
#
# This file is provided as example.runtime.properties.
#
# Save a copy of this file as runtime.properties in your VIVO home directory,
# Save a copy of this file as runtime.properties in your VIVO home directory,
# and edit the properties as needed for your installation.
#
# For more information on specific properties, see the configuration reference
# or installation options section of the technical documentation for the
# version of VIVO you are running:
# https://wiki.duraspace.org/display/VIVO/VIVO+Technical+Documentation
# https://wiki.duraspace.org/display/VIVO/VIVO+Technical+Documentation
#
# -----------------------------------------------------------------------------
@ -19,13 +19,13 @@
# BASIC PROPERTIES
# -----------------------------------------------------------------------------
#
# This namespace will be used when generating URIs for objects created in the
# editor. In order to serve linked data, the default namespace must be composed
# as follows (optional elements in parentheses):
#
# This namespace will be used when generating URIs for objects created in the
# editor. In order to serve linked data, the default namespace must be composed
# as follows (optional elements in parentheses):
#
# scheme + server_name (+ port) (+ servlet_context) + "/individual/"
#
#
# For example, Cornell's default namespace is:
#
# http://vivo.cornell.edu/individual/
@ -33,9 +33,9 @@
Vitro.defaultNamespace = http://vivo.mydomain.edu/individual/
#
# The email address of the root user for the VIVO application. The password
# for this user is initially set to "rootPassword", but you will be asked to
# change the password the first time you log in.
# The email address of the root user for the VIVO application. The password
# for this user is initially set to "rootPassword", but you will be asked to
# change the password the first time you log in.
#
rootUser.emailAddress = vivo_root@mydomain.edu
@ -57,8 +57,8 @@ argon2.memory = 1024
argon2.time = 1000
#
# The basic parameters for a database connection. Change the end of the
# URL to reflect your database name (if it is not "vitrodb"). Change the username
# The basic parameters for a database connection. Change the end of the
# URL to reflect your database name (if it is not "vitrodb"). Change the username
# and password to match the authorized database user you created.
#
VitroConnection.DataSource.url = jdbc:mysql://localhost/vitrodb
@ -66,14 +66,14 @@ VitroConnection.DataSource.username = vitrodbUsername
VitroConnection.DataSource.password = vitrodbPassword
#
# Email parameters which VIVO can use to send mail. If these are left empty,
# Email parameters which VIVO can use to send mail. If these are left empty,
# the "Contact Us" form will be disabled and users will not be notified of
# changes to their accounts.
#
email.smtpHost = smtp.mydomain.edu
email.replyTo = vivoAdmin@mydomain.edu
#
#
# URL of Solr context used in local VIVO search. This will usually consist of:
# scheme + server_name + port + vivo_webapp_name + "solr"
# In the standard installation, the Solr context will be on the same server as VIVO,
@ -90,7 +90,7 @@ vitro.local.solr.url = http://localhost:8080/vivosolr
# -----------------------------------------------------------------------------
#
# How is a logged-in user associated with a particular Individual? One way is
# How is a logged-in user associated with a particular Individual? One way is
# for the Individual to have a property whose value is the username of the user.
# This value should be the URI for that property.
#
@ -103,11 +103,11 @@ selfEditing.idMatchingProperty = http://vivo.mydomain.edu/ns#networkId
#
# If an external authentication system like Shibboleth or CUWebAuth is to be
# used, this property says which HTTP header will contain the user ID from
# the authentication system. If such a system is not to be used, leave this
# commented out. Consult the installation instructions for more details.
# used, this property says which HTTP header will contain the user ID from
# the authentication system. If such a system is not to be used, leave this
# commented out. Consult the installation instructions for more details.
#
#externalAuth.netIdHeaderName = remote_userID
#externalAuth.netIdHeaderName = remote_userID
# -----------------------------------------------------------------------------
@ -133,16 +133,16 @@ VitroConnection.DataSource.pool.maxIdle = 10
# -----------------------------------------------------------------------------
#
# Parameters to change in order to use VIVO with a database other than
# Parameters to change in order to use VIVO with a database other than
# MySQL.
#
VitroConnection.DataSource.dbtype = MySQL
VitroConnection.DataSource.driver = com.mysql.jdbc.Driver
VitroConnection.DataSource.validationQuery = SELECT 1
# Note: the above parameters allow you to change the relational database that
# is used as the back end for Jena SDB. If you want to use a triple store
# other than SDB, you will need to edit applicationSetup.n3. See the
# Note: the above parameters allow you to change the relational database that
# is used as the back end for Jena SDB. If you want to use a triple store
# other than SDB, you will need to edit applicationSetup.n3. See the
# installation instructions for more details.
@ -155,19 +155,19 @@ VitroConnection.DataSource.validationQuery = SELECT 1
# The base URL of the ORNG Shindig server. Usually, this is the same host and port
# number as VIVO itself, with a context path of "shindigorng".
#
#OpenSocial.shindigURL = http://localhost:8080/shindigorng
#OpenSocial.shindigURL = http://localhost:8080/shindigorng
#
# For OpenSocial integration
# The host name and port number of the service that provides security tokens for VIVO and
# Shindig to share. For now, the host name must be the actual host, not "localhost" or "127.0.0.1"
# The port number must be 8777
# The port number must be 8777
#
#OpenSocial.tokenService = myhost.mydomain.edu:8777
#
# For OpenSocial integration
# The path to the key file that will be used when generating security tokens for VIVO and
# The path to the key file that will be used when generating security tokens for VIVO and
# shindig to share.
#
#OpenSocial.tokenKeyFile = /usr/local/vivo/data/shindig/openssl/securitytokenkey.txt
@ -184,26 +184,26 @@ VitroConnection.DataSource.validationQuery = SELECT 1
# -----------------------------------------------------------------------------
#
# Show only the most appropriate data values based on the Accept-Language
# Show only the most appropriate data values based on the Accept-Language
# header supplied by the browser. Default is false if not set.
#
# RDFService.languageFilter = false
#
# Force VIVO to use a specific language or Locale instead of those
# specified by the browser. This affects RDF data retrieved from the model,
# Force VIVO to use a specific language or Locale instead of those
# specified by the browser. This affects RDF data retrieved from the model,
# if RDFService.languageFilter is true. This also affects the text of pages
# that have been modified to support multiple languages.
# that have been modified to support multiple languages.
#
# languages.forceLocale = en_US
#
# A list of supported languages or Locales that the user may choose to
# use instead of the one specified by the browser. Selection images must
# be available in the i18n/images directory of the theme. This affects
# RDF data retrieved from the model, if RDFService.languageFilter is true.
# This also affects the text of pages that have been modified to support
# multiple languages.
# be available in the i18n/images directory of the theme. This affects
# RDF data retrieved from the model, if RDFService.languageFilter is true.
# This also affects the text of pages that have been modified to support
# multiple languages.
#
# This should not be used with languages.forceLocale, which will override it.
#
@ -216,7 +216,7 @@ VitroConnection.DataSource.validationQuery = SELECT 1
# orcid.clientId = 0000-0000-0000-000X
# orcid.clientPassword = 00000000-0000-0000-0000-000000000000
#
# The orcid.webappBaseUrl must end in a front slash (/)
# if it includes a path past the domain and (if required) port.
@ -297,28 +297,28 @@ VitroConnection.DataSource.validationQuery = SELECT 1
# Options: tiny, small, medium, large
#resource.plum-print.size=medium
#
# When the following flag is set to enabled, the VIVO home page displays a
# global map highlighting the geographical focus of foaf:person individuals.
#
# When the following flag is set to enabled, the VIVO home page displays a
# global map highlighting the geographical focus of foaf:person individuals.
#
#homePage.geoFocusMaps=enabled
#
# VIVO supports the simultaneous use of a full foaf:Person profile page view
# and a "quick" page view that emphasizes the individual's webpage presence.
#
# VIVO supports the simultaneous use of a full foaf:Person profile page view
# and a "quick" page view that emphasizes the individual's webpage presence.
# Implementing this feature requires an installation to develop a web service
# that captures images of web pages or to use an existing service outside of VIVO.
# that captures images of web pages or to use an existing service outside of VIVO.
#
#multiViews.profilePageTypes=enabled
#
# Tell VIVO to generate HTTP headers on its responses to facilitate caching the
# profile pages that it creates.
# Tell VIVO to generate HTTP headers on its responses to facilitate caching the
# profile pages that it creates.
#
# Developers will likely want to leave caching disabled, since a change to a
# Freemarker template or to a Java class would not cause the page to be
# Freemarker template or to a Java class would not cause the page to be
# considered stale.
#
http.createCacheHeaders = true
@ -345,12 +345,12 @@ http.createCacheHeaders = true
#
# visualization.topLevelOrg = http://vivo.mydomain.edu/individual/topLevelOrgURI
#
#
# The temporal graph visualization can require extensive machine resources.
# This can have a particularly noticeable impact on memory usage if
# - The organization tree is deep,
# - The number of grants and publications is large.
# VIVO 1.3 release mitigates this problem by the way of a caching mechanism &
# VIVO 1.3 release mitigates this problem by the way of a caching mechanism &
# hence we can safely set this to be enabled by default.
#
visualization.temporal = enabled
@ -366,7 +366,7 @@ proxy.eligibleTypeList = http://xmlns.com/foaf/0.1/Person, http://xmlns.com/foaf
# The format for this property is id, name; id1, name1; id2, name2 etc.
# For more information, see Service Metadata from this page:
# https://github.com/OpenRefine/OpenRefine/wiki/Reconciliation-Service-Api
#
#
Vitro.reconcile.defaultTypeList = http://vivoweb.org/ontology/core#Role, core:Role; \
http://vivoweb.org/ontology/core#AcademicDegree, core:Academic Degree; \
http://purl.org/NET/c4dm/event.owl#Event, event:Event; \

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@ -15,7 +15,7 @@
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://vivoweb.org/ontology/degree/academicDegree3">
<core:abbreviation>A.M.T.</core:abbreviation>
<rdf:type rdf:resource="http://vivoweb.org/ontology/core#AcademicDegree"/>
@ -640,7 +640,7 @@
<core:abbreviation>M.Ch.E.</core:abbreviation>
<rdfs:label xml:lang="en-US">M.Ch.E. Master of Chemical Engineering</rdfs:label>
<rdf:type rdf:resource="http://vivoweb.org/ontology/core#AcademicDegree"/>
</rdf:Description>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/degree/academicDegree107">
<core:abbreviation>Th.B.</core:abbreviation>
<rdfs:label xml:lang="en-US">Th.B. Bachelor of Theology</rdfs:label>
@ -772,5 +772,5 @@
<rdfs:label xml:lang="en-US">H.S.C. Higher School Certificate</rdfs:label>
<rdf:type rdf:resource="http://vivoweb.org/ontology/core#AcademicDegree"/>
</rdf:Description>
</rdf:RDF>

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@ -348,4 +348,4 @@
<obo:BFO_0000051 rdf:resource="http://dbpedia.org/resource/Wisconsin"/>
<obo:BFO_0000051 rdf:resource="http://dbpedia.org/resource/Wyoming"/>
</rdf:Description>
</rdf:RDF>
</rdf:RDF>

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@ -1,2 +1,2 @@
<http://orcid.org/1234-1231-1231-3333>
<http://orcid.org/1234-1231-1231-3333>
<http://vivoweb.org/ontology/core#validatedOrcidId> <http://vivo.mydomain.edu/individual/n4571> .

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@ -15,7 +15,7 @@
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://vivoweb.org/ontology#vitroClassGrouppublications">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<rdfs:label xml:lang="en-US">research</rdfs:label>

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@ -3,7 +3,7 @@
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:j.0="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description>
<rdf:type rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#Portal"/>
<rdfs:label xml:lang="en-US">VIVO</rdfs:label>

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@ -11,7 +11,7 @@
xmlns:j.6="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://vivoweb.org/ontology#vitroPropertyGroupaffiliation">
<vitro:modTime rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2009-12-28T09:47:01</vitro:modTime>
<rdfs:label xml:lang="en-US">affiliation</rdfs:label>

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@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -7,8 +7,8 @@
@prefix core: <http://vivoweb.org/ontology/core#> .
@prefix vivoweb: <http://vivoweb.org/ontology#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
# academic departments datagetter
# academic departments datagetter
<freemarker:lib-home-page.ftl> display:hasDataGetter display:academicDeptsDataGetter .
@ -23,8 +23,8 @@ display:academicDeptsDataGetter
WHERE
{
?theURI a vivo:AcademicDepartment .
?theURI rdfs:label ?label
?theURI rdfs:label ?label
}
""" .

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@ -1,12 +1,12 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
#
# Associate the LocaleSelectionDataGetter with the languageSelector.ftl Freemarker template.
#
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
<freemarker:languageSelector.ftl> display:hasDataGetter display:localeSelectorDataGetter .
display:localeSelectorDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.i18n.selection.LocaleSelectionDataGetter> .

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@ -1,5 +1,5 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@ -7,12 +7,12 @@
## The example below demonstrates how you can associate particular ModelChangePreprocessors
## with the application as a whole. These preprocessors will be run with
## every edit/addition in N3EditUtils.preprocessModels(changes, configuration, vreq);
## every edit/addition in N3EditUtils.preprocessModels(changes, configuration, vreq);
## Defines the preprocessor class
## Defines the preprocessor class
## Can extend this to define what the constructor arguments should be if required, and then N3EditUtils.java should be modified
## to know it can pull out parameters based on what is defined in the display model
# Testing to see if this will be read in BECAUSE this has changed and should be read in
# <java:edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.TestModelChangePreprocessor>
# a <java:edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ModelChangePreprocessor> .
# <java:edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.TestModelChangePreprocessor>
# a <java:edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ModelChangePreprocessor> .

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@ -1,10 +1,10 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
#
# datagetter to fetch ORCID info for the person.
#
# datagetter to fetch ORCID info for the person.
#
<freemarker:individual-orcidInterface.ftl> display:hasDataGetter display:orcidIdDataGetter .

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@ -1,10 +1,10 @@
@prefix : <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationSetup#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix searchIndex: <java:edu.cornell.mannlib.vitro.webapp.searchindex#> .
#
# Specify the SearchIndexExcluders, DocumentModifiers and IndexingUriFinders for VIVO.
# Specify the SearchIndexExcluders, DocumentModifiers and IndexingUriFinders for VIVO.
# These are in addition to the ones specified for VIVO.
#
@ -28,7 +28,7 @@
:hasOutgoingProperty "http://vivoweb.org/ontology/core#relates" .
# Some roles look like this: bearerOf ==> role ==> roleContributesTo
# inheresIn <== role <== contributingRole
# inheresIn <== role <== contributingRole
:extension_forContextNodes_role_contributes_1
a searchIndex:indexing.IndexingUriFinder ,
searchIndex:documentBuilding.DocumentModifier ,
@ -36,7 +36,7 @@
rdfs:label "Labels across bearerOf/contributesTo" ;
:hasIncomingProperty "http://purl.obolibrary.org/obo/RO_0000053" ;
:hasOutgoingProperty "http://vivoweb.org/ontology/core#roleContributesTo" .
:extension_forContextNodes_role_contributes_2
a searchIndex:indexing.IndexingUriFinder ,
searchIndex:documentBuilding.DocumentModifier ,
@ -44,9 +44,9 @@
rdfs:label "Labels across contributor/inheresIn" ;
:hasIncomingProperty "http://vivoweb.org/ontology/core#contributingRole" ;
:hasOutgoingProperty "http://purl.obolibrary.org/obo/RO_0000052" .
# Other roles look like this: bearerOf ==> role ==> realizedIn
# inheresIn <== role <== realizes
# inheresIn <== role <== realizes
:extension_forContextNodes_role_realizedIn_1
a searchIndex:indexing.IndexingUriFinder ,
searchIndex:documentBuilding.DocumentModifier ,
@ -54,7 +54,7 @@
rdfs:label "Labels across bearerOf/realizedIn" ;
:hasIncomingProperty "http://purl.obolibrary.org/obo/RO_0000053" ;
:hasOutgoingProperty "http://purl.obolibrary.org/obo/BFO_0000054" .
:extension_forContextNodes_role_realizedIn_2
a searchIndex:indexing.IndexingUriFinder ,
searchIndex:documentBuilding.DocumentModifier ,
@ -62,7 +62,7 @@
rdfs:label "Labels across realizes/inheresIn" ;
:hasIncomingProperty "http://purl.obolibrary.org/obo/BFO_0000055" ;
:hasOutgoingProperty "http://purl.obolibrary.org/obo/RO_0000052" .
# Roles on grants look like this: bearerOf ==> role ==> relatedBy
# inheresIn <== role <== relates
:extension_forContextNodes_roles_on_grants_1
@ -72,7 +72,7 @@
rdfs:label "Labels across bearerOf/relates" ;
:hasIncomingProperty "http://purl.obolibrary.org/obo/RO_0000053" ;
:hasOutgoingProperty "http://vivoweb.org/ontology/core#relatedBy" .
:extension_forContextNodes_roles_on_grants_2
a searchIndex:indexing.IndexingUriFinder ,
searchIndex:documentBuilding.DocumentModifier ,
@ -80,7 +80,7 @@
rdfs:label "Labels across contributor/relatedBy" ;
:hasIncomingProperty "http://vivoweb.org/ontology/core#relates" ;
:hasOutgoingProperty "http://purl.obolibrary.org/obo/RO_0000052" .
# ------------------------------------
@ -127,7 +127,7 @@
:hasSelectQuery """
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
SELECT ?title
SELECT ?title
WHERE {
?uri obo:ARG_2000028 ?card .
?card a vcard:Individual .
@ -135,7 +135,7 @@
?titleHolder vcard:title ?title .
}
""" .
:vivodocumentModifier_EmailAddress
a searchIndex:documentBuilding.SelectQueryDocumentModifier ,
searchIndex:documentBuilding.DocumentModifier ;
@ -143,7 +143,7 @@
:hasSelectQuery """
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
SELECT ?email
SELECT ?email
WHERE {
?uri obo:ARG_2000028 ?card .
?card a vcard:Individual .

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -7,7 +7,7 @@
@prefix core: <http://vivoweb.org/ontology/core#> .
@prefix vivoweb: <http://vivoweb.org/ontology#> .
#### n3 for research areas ####
## associate the classes with the datagetter ##
@ -20,7 +20,7 @@
display:getDepartmentDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.SparqlQueryDataGetter>;
display:saveToVar "departmentsResults";
display:query
display:query
"""
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
@ -33,12 +33,12 @@ display:getDepartmentDataGetter
?posn vivo:relates ?dept .
?dept a foaf:Organization .
?dept rdfs:label ?departmentLabel
OPTIONAL { ?posn vivo:dateTimeInterval ?dti
OPTIONAL { ?posn vivo:dateTimeInterval ?dti
OPTIONAL { ?dti vivo:end ?end .
?end vivo:dateTime ?endDate
}
}
FILTER ( !bound(?endDate) ||
FILTER ( !bound(?endDate) ||
substr(str(?endDate), 1, 4) >= substr(str(now()), 1, 4) )
}
ORDER BY ?deptLabel
@ -47,11 +47,11 @@ display:getDepartmentDataGetter
display:getVocabServiceDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.SparqlQueryDataGetter>;
display:saveToVar "vocabularyService";
display:query
display:query
"""
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
SELECT DISTINCT (str(?vocabularySourceName) AS ?vocabService)
SELECT DISTINCT (str(?vocabularySourceName) AS ?vocabService)
WHERE {
?individualURI rdfs:isDefinedBy ?vocabularySource .
?vocabularySource rdfs:label ?vocabularySourceName .
@ -74,10 +74,10 @@ display:getDepartmentDataGetter
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(Str(?researchAreaLabel) AS ?raLabel)
(str(?departmentLabel) AS ?orgLabel)
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(Str(?researchAreaLabel) AS ?raLabel)
(str(?departmentLabel) AS ?orgLabel)
?ra
?org
WHERE {

View file

@ -53,23 +53,23 @@
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#end">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-dateTimeValue.xml</display:listViewConfigFile>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#webpage">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-webpage.xml</display:listViewConfigFile>
</rdf:Description>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasAssociatedConcept">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-hasAssociatedConcept.xml</display:listViewConfigFile>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasSubjectArea">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-hasAssociatedConcept.xml</display:listViewConfigFile>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasResearchArea">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-hasAssociatedConcept.xml</display:listViewConfigFile>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#publisherOf">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-publisherOf.xml</display:listViewConfigFile>
</rdf:Description>
@ -119,9 +119,9 @@
<!--
******************************************************************
data property custom list views
******************************************************************
******************************************************************
-->
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#scopusId">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-scopusId.xml</display:listViewConfigFile>
</rdf:Description>
@ -129,5 +129,5 @@
<rdf:Description rdf:about="http://purl.org/ontology/bibo/doi">
<display:listViewConfigFile rdf:datatype="http://www.w3.org/2001/XMLSchema#string">listViewConfig-doi.xml</display:listViewConfigFile>
</rdf:Description>
</rdf:RDF>

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -7,7 +7,7 @@
@prefix core: <http://vivoweb.org/ontology/core#> .
@prefix vivoweb: <http://vivoweb.org/ontology#> .
#### n3 for research areas ####
## associate the classes with the datagetter ##
@ -19,14 +19,14 @@
<http://vivoweb.org/ontology/core#Laboratory> display:hasDataGetter display:getResearchAreaDataGetter .
<http://vivoweb.org/ontology/core#Library> display:hasDataGetter display:getResearchAreaDataGetter .
<http://vivoweb.org/ontology/core#ResearchOrganization> display:hasDataGetter display:getResearchAreaDataGetter .
## define the datagetter ##
display:getResearchAreaDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.SparqlQueryDataGetter>;
display:saveToVar "researchAreaResults";
display:query
display:query
"""
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
@ -39,12 +39,12 @@ display:getResearchAreaDataGetter
?person a foaf:Person .
?person vivo:hasResearchArea ?ra .
?ra rdfs:label ?researchAreaLabel
OPTIONAL { ?posn vivo:dateTimeInterval ?dti
OPTIONAL { ?posn vivo:dateTimeInterval ?dti
OPTIONAL { ?dti vivo:end ?end .
?end vivo:dateTime ?endDate
}
}
FILTER ( !bound(?endDate) ||
FILTER ( !bound(?endDate) ||
substr(str(?endDate), 1, 4) >= substr(str(now()), 1, 4) )
}
ORDER BY ?raLabel
@ -66,10 +66,10 @@ display:getResearchAreaDataGetter
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(str(?researchAreaLabel) AS ?raLabel)
(str(?organizationLabel) AS ?orgLabel)
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(str(?researchAreaLabel) AS ?raLabel)
(str(?organizationLabel) AS ?orgLabel)
?ra
?org
WHERE {
@ -104,10 +104,10 @@ display:getResearchAreaDataGetter
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(Str(?researchAreaLabel) AS ?raLabel)
(str(?organizationLabel) AS ?orgLabel)
SELECT DISTINCT (str (?prsnLabel) AS ?personLabel)
?person
(Str(?researchAreaLabel) AS ?raLabel)
(str(?organizationLabel) AS ?orgLabel)
?ra
WHERE {
?orgURI vivo:relatedBy ?posn .
@ -138,7 +138,7 @@ display:getResearchAreaDataGetter
display:getGrantsDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.SparqlQueryDataGetter>;
display:saveToVar "getGrantResults";
display:query
display:query
"""
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -8,28 +8,28 @@
@prefix vivoweb: <http://vivoweb.org/ontology#> .
@prefix afn: <http://jena.apache.org/ARQ/function#> .
#### Check to see if the person being viewed has a first and last name. ####
#### If so, the page will display the QR code icon link. ####
## associate the classes with the datagetter (COUNT(?vIndividual) AS ?theCount)##
<http://xmlns.com/foaf/0.1/Person> display:hasDataGetter display:checkNamesForQrCodeDG .
## define the datagetter ##
display:checkNamesForQrCodeDG
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.SparqlQueryDataGetter>;
display:saveToVar "checkNamesResult";
display:query
display:query
"""
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
SELECT DISTINCT ?vIndividual
WHERE {
?individualURI obo:ARG_2000028 ?vIndividual .
?vIndividual vcard:hasName ?vName .
?vIndividual vcard:hasName ?vName .
?vName vcard:givenName ?firstName .
?vName vcard:familyName ?lastName .
}

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix vitroDisplay: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -11,17 +11,17 @@
# See vitroSearchProhibited.n3 for more information about files in this directory.
vitroDisplay:SearchIndex
rdf:type owl:Thing ;
vitroDisplay:SearchIndex
rdf:type owl:Thing ;
vitroDisplay:excludeClass obo:BFO_0000023 ;
vitroDisplay:excludeClass core:AdvisingRelationship ;
vitroDisplay:excludeClass core:Editorship ;
vitroDisplay:excludeClass core:Authorship ;
vitroDisplay:excludeClass core:Position ;
vitroDisplay:excludeClass core:Position ;
vitroDisplay:excludeClass core:AwardReceipt ;
vitroDisplay:excludeClass core:AwardedDegree ;
vitroDisplay:excludeClass core:ResearchActivity ;
vitroDisplay:excludeClass core:EducationalProcess ;
vitroDisplay:excludeClass core:EducationalProcess ;
vitroDisplay:excludeClass bibo:DocumentStatus ;
vitroDisplay:excludeClass core:DateTimeValue ;
vitroDisplay:excludeClass core:DateTimeValuePrecision ;

View file

@ -8,7 +8,7 @@
@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> .
@prefix local: <http://vitro.mannlib.cornell.edu/ns/vitro/siteConfig/> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@prefix obo: <http://purl.obolibrary.org/obo/> .
@base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> .
@ -67,7 +67,7 @@ local:authorInAuthorshipConfig a :ObjectPropertyDisplayConfig ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator"^^xsd:string ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupbibliographic> .
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupbibliographic> .
local:orgInAuthorshipContext a :ConfigContext ;
:hasConfiguration local:orgInAuthorshipConfig ;
@ -85,7 +85,7 @@ local:orgInAuthorshipConfig a :ObjectPropertyDisplayConfig ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator"^^xsd:string ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupbibliographic> .
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupbibliographic> .
#### role contexts and configurations ###
@ -94,7 +94,7 @@ local:hasServiceProviderRoleContext a :ConfigContext ;
:configContextFor <http://purl.obolibrary.org/obo/RO_0000053> ;
:qualifiedByDomain <http://xmlns.com/foaf/0.1/Person> ;
:qualifiedBy <http://purl.obolibrary.org/obo/ERO_0000012> .
local:hasServiceProviderRoleConfig a :ObjectPropertyDisplayConfig ;
:listViewConfigFile "listViewConfig-roleContributesTo.xml"^^xsd:string ;
rdfs:label "hasServiceProviderRole"@en-US;
@ -105,7 +105,7 @@ local:hasServiceProviderRoleConfig a :ObjectPropertyDisplayConfig ;
vitro:stubObjectPropertyAnnot "true"^^xsd:boolean ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddServiceProviderRoleToPersonGenerator"^^<http://www.w3.org/2001/XMLSchema#string> ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoutreach> .
local:hasClinicalRoleContext a :ConfigContext ;
:hasConfiguration local:hasClinicalRoleConfig ;
:configContextFor <http://purl.obolibrary.org/obo/RO_0000053> ;
@ -478,7 +478,7 @@ local:orgHasPresenterRoleConfig a :ObjectPropertyDisplayConfig ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPresenterRoleToPersonGenerator"^^<http://www.w3.org/2001/XMLSchema#string> ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupbibliographic> .
### awards and educational training ###
local:awardOrHonorContext a :ConfigContext ;
@ -744,11 +744,11 @@ local:orgAdministersGrantConfig a :ObjectPropertyDisplayConfig ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationAdministersGrantGenerator"^^<http://www.w3.org/2001/XMLSchema#string> ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupresearch> .
### collaborator properties ###
# formerly defined in common for all Agents in initialTBoxAnnotations.n3 where allows cross-linking people and orgs
local:hasCollaboratorContext a :ConfigContext ; # persons
:hasConfiguration local:hasCollaboratorConfig ;
:configContextFor <http://vivoweb.org/ontology/core#hasCollaborator> ;
@ -775,7 +775,7 @@ local:hasCollaboratorConfig a :ObjectPropertyDisplayConfig ;
vitro:publicDescriptionAnnot
"Use for a simple assertion that another person is an ongoing collaborator; to describe the relationship in more detail enter a role for each collaborator in some common endeavor."^^xsd:string ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupaffiliation> .
local:orgHasCollaboratorContext a :ConfigContext ;
:hasConfiguration local:orgHasCollaboratorConfig ;
:configContextFor <http://vivoweb.org/ontology/core#hasCollaborator> ;
@ -1013,7 +1013,7 @@ local:webpageInfoConfig a :ObjectPropertyDisplayConfig ;
local:webpageSoftwareContext a :ConfigContext ;
:hasConfiguration local:webpageSoftwareConfig ;
:configContextFor <http://purl.obolibrary.org/obo/ARG_2000028> ;
:qualifiedByDomain <http://purl.obolibrary.org/obo/ERO_0000071> ;
:qualifiedByDomain <http://purl.obolibrary.org/obo/ERO_0000071> ;
:qualifiedByRoot <http://www.w3.org/2006/vcard/ns#Kind> ;
:qualifiedBy <http://www.w3.org/2006/vcard/ns#URL> .
@ -1029,7 +1029,7 @@ local:webpageSoftwareConfig a :ObjectPropertyDisplayConfig ;
local:webpageFacilityContext a :ConfigContext ;
:hasConfiguration local:webpageFacilityConfig ;
:configContextFor <http://purl.obolibrary.org/obo/ARG_2000028> ;
:qualifiedByDomain <http://vivoweb.org/ontology/core#Facility> ;
:qualifiedByDomain <http://vivoweb.org/ontology/core#Facility> ;
:qualifiedByRoot <http://www.w3.org/2006/vcard/ns#Kind> ;
:qualifiedBy <http://www.w3.org/2006/vcard/ns#URL> .
@ -1045,7 +1045,7 @@ local:webpageFacilityConfig a :ObjectPropertyDisplayConfig ;
local:webpageProjectContext a :ConfigContext ;
:hasConfiguration local:webpageProjectConfig ;
:configContextFor <http://purl.obolibrary.org/obo/ARG_2000028> ;
:qualifiedByDomain <http://vivoweb.org/ontology/core#Project> ;
:qualifiedByDomain <http://vivoweb.org/ontology/core#Project> ;
:qualifiedByRoot <http://www.w3.org/2006/vcard/ns#Kind> ;
:qualifiedBy <http://www.w3.org/2006/vcard/ns#URL> .
@ -1143,7 +1143,7 @@ local:outputOfConfig a :ObjectPropertyDisplayConfig ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:hasOutputContext a :ConfigContext ;
:hasConfiguration local:hasOutputConfig ;
:configContextFor obo:RO_0002234 ;
@ -1210,7 +1210,7 @@ local:documentPartOfConfig a :ObjectPropertyDisplayConfig ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:geographicLocationContainsLocationContext a :ConfigContext ;
:hasConfiguration local:geographicLocationContainsLocationConfig ;
:configContextFor <http://purl.obolibrary.org/obo/BFO_0000051> ;
@ -1227,13 +1227,13 @@ local:geographicLocationContainsLocationConfig a :ObjectPropertyDisplayConfig ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:geographicLocationWithinLocationContext a :ConfigContext ;
:hasConfiguration local:geographicLocationWithinLocationConfig ;
:configContextFor <http://purl.obolibrary.org/obo/BFO_0000050> ;
:qualifiedByDomain vivo:GeographicLocation ;
:qualifiedBy vivo:GeographicLocation .
local:geographicLocationWithinLocationConfig a :ObjectPropertyDisplayConfig ;
:listViewConfigFile "listViewConfig-fauxPropertyDefault.xml"^^xsd:string ;
rdfs:label "geographicLocationWithinLocation"@en-US;
@ -1329,13 +1329,13 @@ local:inEventSeriesConfig a :ObjectPropertyDisplayConfig ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:eventsForSeriesContext a :ConfigContext ;
:hasConfiguration local:eventsForSeriesConfig ;
:configContextFor <http://purl.obolibrary.org/obo/BFO_0000051> ;
:qualifiedByDomain <http://vivoweb.org/ontology/core#EventSeries> ;
:qualifiedBy <http://purl.org/NET/c4dm/event.owl#Event> .
local:eventsForSeriesConfig a :ObjectPropertyDisplayConfig ;
:listViewConfigFile "listViewConfig-fauxPropertyDefault.xml"^^xsd:string ;
rdfs:label "eventsForSeries"@en-US;
@ -1363,7 +1363,7 @@ local:eventLocationConfig a :ObjectPropertyDisplayConfig ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupaddress> .
local:eventInFacilityContext a :ConfigContext ;
:hasConfiguration local:eventInFacilityConfig ;
:configContextFor <http://purl.obolibrary.org/obo/RO_0001025> ; ## located in
@ -1448,7 +1448,7 @@ local:hasRoomConfig a :ObjectPropertyDisplayConfig ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:roomWithinBuildingContext a :ConfigContext ;
:hasConfiguration local:roomWithinBuildingConfig ;
:configContextFor <http://purl.obolibrary.org/obo/BFO_0000050> ;
@ -1517,7 +1517,7 @@ local:facilitySiteOfEventConfig a :ObjectPropertyDisplayConfig ;
vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
local:facilitySiteOfAgentContext a :ConfigContext ;
:hasConfiguration local:facilitySiteOfAgentConfig ;
:configContextFor <http://purl.obolibrary.org/obo/RO_0001015> ; ## location of
@ -1535,10 +1535,10 @@ local:facilitySiteOfAgentConfig a :ObjectPropertyDisplayConfig ;
vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
# uses and used by need work -- apply to continuants and occurrents, and material entities as well as information content entities
# uses and used by need work -- apply to continuants and occurrents, and material entities as well as information content entities
#local:projectUsesMaterialEntityContext a :ConfigContext ;
# :hasConfiguration local:projectUsesMaterialEntityConfig ;
# :configContextFor <http://purl.obolibrary.org/obo/ERO_0000031> ;
# :configContextFor <http://purl.obolibrary.org/obo/ERO_0000031> ;
# :qualifiedByDomain vivo:Project ;
# :qualifiedBy <http://purl.obolibrary.org/obo/BFO_0000040> . ## Material Entity
@ -1552,10 +1552,10 @@ local:facilitySiteOfAgentConfig a :ObjectPropertyDisplayConfig ;
# vitro:offerCreateNewOptionAnnot "true"^^xsd:boolean ;
# vitro:selectFromExistingAnnot "true"^^xsd:boolean ;
# :propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
#local:materialEntityUsedByProjectContext a :ConfigContext ;
# :hasConfiguration local:MaterialEntityUsedByProjectConfig ;
# :configContextFor <http://purl.obolibrary.org/obo/ERO_0000070> ;
# :configContextFor <http://purl.obolibrary.org/obo/ERO_0000070> ;
# :qualifiedByDomain <http://purl.obolibrary.org/obo/BFO_0000040> ; ## Material Entity
# :qualifiedBy vivo:Project .

View file

@ -8,7 +8,7 @@
@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> .
@prefix local: <http://vitro.mannlib.cornell.edu/ns/vitro/siteConfig/> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> .

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix about: <http://vitro.mannlib.cornell.edu/ns/default/about#> .

View file

@ -1,4 +1,4 @@
# $This file is distributed under the terms of the license in LICENSE$
# $This file is distributed under the terms of the license in LICENSE$
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@ -12,7 +12,7 @@
#### Default Menu ####
display:DefaultMenu
display:DefaultMenu
a display:MainMenu ;
rdfs:label "Default Menu" ;
display:hasElement display:EventsMenuItem ;
@ -24,36 +24,36 @@ display:DefaultMenu
#### Menu Items for Default Menu ####
display:HomeMenuItem
display:HomeMenuItem
a display:NavigationElement ;
display:menuPosition 1;
display:linkText "Home";
display:toPage display:Home .
display:PeopleMenuItem
display:PeopleMenuItem
a display:NavigationElement ;
display:menuPosition 2;
display:linkText "People";
display:toPage display:People .
display:OrganizationsMenuItem
display:OrganizationsMenuItem
a display:NavigationElement ;
display:menuPosition 3;
display:linkText "Organizations";
display:toPage display:Organizations .
display:ResearchMenuItem
display:ResearchMenuItem
a display:NavigationElement ;
display:menuPosition 4;
display:linkText "Research";
display:toPage display:Research .
display:EventsMenuItem
display:EventsMenuItem
a display:NavigationElement ;
display:menuPosition 5;
display:linkText "Events";
display:toPage display:Events .
display:toPage display:Events .
display:CapabilityMapMenuItem
a display:NavigationElement ;
display:menuPosition 6;
@ -61,22 +61,22 @@ display:CapabilityMapMenuItem
display:toPage display:CapabilityMap .
display:Home
a display:HomePage ;
a display:HomePage ;
a display:Page ;
display:title "Home" ;
display:title "Home" ;
display:urlMapping "/" ;
display:hasDataGetter display:homeDataGetter;
display:cannotDeletePage "true" .
display:Events
a display:Page ;
display:Events
a display:Page ;
a display:ClassGroupPage;
display:forClassGroup vivoweb:vitroClassGroupevents ;
display:title "Events" ;
display:urlMapping "/events" ;
display:urlMapping "/events" ;
display:hasDataGetter display:eventsDataGetter .
display:Organizations
display:Organizations
a display:Page ;
a display:ClassGroupPage;
display:forClassGroup vivoweb:vitroClassGrouporganizations ;
@ -84,16 +84,16 @@ display:Organizations
display:urlMapping "/organizations";
display:hasDataGetter display:organizationsDataGetter .
display:People
a display:Page ;
display:People
a display:Page ;
a display:ClassGroupPage;
display:forClassGroup vivoweb:vitroClassGrouppeople ;
display:title "People" ;
display:urlMapping "/people" ;
display:hasDataGetter display:peopleDataGetter .
display:Research
a display:Page ;
display:Research
a display:Page ;
a display:ClassGroupPage;
display:forClassGroup vivoweb:vitroClassGrouppublications ;
display:title "Research" ;
@ -121,12 +121,12 @@ display:organizationsDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.ClassGroupPageData>;
display:forClassGroup
vivoweb:vitroClassGrouporganizations .
display:eventsDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.ClassGroupPageData>;
display:forClassGroup
vivoweb:vitroClassGroupevents .
display:homeDataGetter
a <java:edu.cornell.mannlib.vitro.webapp.utils.dataGetter.BrowseDataGetter> .

View file

@ -12,7 +12,7 @@
<owl:Ontology rdf:about="http://purl.org/ontology/bibo/"/>
<owl:Ontology rdf:about="http://vivoweb.org/ontology/core"/>
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/"/>
<owl:Ontology rdf:about="http://www.w3.org/2006/vcard/ns"/>
<owl:Ontology rdf:about="http://www.w3.org/2006/vcard/ns"/>
<owl:Ontology rdf:about="http://aims.fao.org/aos/geopolitical.owl"/>
<owl:Ontology rdf:about="http://purl.org/net/OCRe/research.owl"/>
<owl:Ontology rdf:about="http://purl.org/net/OCRe/study_design.owl"/>
@ -27,5 +27,5 @@
<owl:Ontology rdf:about="http://purl.org/vocab/vann/"/>
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ro.owl"/>
<owl:Ontology rdf:about="http://www.ebi.ac.uk/efo/swo/"/>
</rdf:RDF>
</rdf:RDF>

File diff suppressed because it is too large Load diff

View file

@ -32,7 +32,7 @@
<http://www.w3.org/2004/02/skos/core>
rdfs:label "SKOS (Simple Knowledge Organization System)"@en-US ;
vitro:ontologyPrefixAnnot "skos" .
<http://vivoweb.org/ontology/core>
rdfs:label "VIVO Core Ontology"@en-US ;
vitro:ontologyPrefixAnnot "vivo" .
@ -40,35 +40,35 @@
<http://purl.org/net/OCRe/research.owl>
rdfs:label "OCRe Research"@en-US ;
vitro:ontologyPrefixAnnot "ocrer" .
<http://purl.org/net/OCRe/study_design.owl>
rdfs:label "OCRe Study Design"@en-US ;
vitro:ontologyPrefixAnnot "ocresd" .
<http://purl.org/net/OCRe/study_protocol.owl>
rdfs:label "OCRe Study Protocol"@en-US ;
vitro:ontologyPrefixAnnot "ocresp" .
<http://purl.org/net/OCRe/statistics.owl>
rdfs:label "OCRe Statistics"@en-US ;
vitro:ontologyPrefixAnnot "ocresst" .
<http://aims.fao.org/aos/geopolitical.owl>
rdfs:label "Geopolitical Ontology"@en-US ;
vitro:ontologyPrefixAnnot "geo" .
<http://purl.org/NET/c4dm/event.owl>
rdfs:label "Event Ontology"@en-US ;
vitro:ontologyPrefixAnnot "event" .
<http://purl.obolibrary.org/obo/>
<http://purl.obolibrary.org/obo/>
rdfs:label "OBO Foundry"@en-US ;
vitro:ontologyPrefixAnnot "obo" .
<http://www.w3.org/2006/vcard/ns>
rdfs:label "VCard"@en-US ;
vitro:ontologyPrefixAnnot "vcard" .
<http://xmlns.com/foaf/0.1/>
rdfs:label "FOAF (Friend of a Friend)"@en-US ;
vitro:ontologyPrefixAnnot "foaf" .
@ -88,22 +88,22 @@
<http://purl.org/spar/cito/>
rdfs:label "CiTO (Citation Typing Ontology)"@en-US ;
vitro:ontologyPrefixAnnot "cito" .
<http://purl.org/dc/terms/>
rdfs:label "Dublin Core Terms"@en-US ;
vitro:ontologyPrefixAnnot "dcterms" .
vitro:ontologyPrefixAnnot "dcterms" .
<http://purl.org/vocab/vann/>
rdfs:label "Vocabulary for Annotating Vocabulary Descriptions"@en-US ;
vitro:ontologyPrefixAnnot "vann" .
<http://purl.obolibrary.org/obo/ro.owl>
rdfs:label "Relations Ontology"@en-US ;
vitro:ontologyPrefixAnnot "ro" .
vitro:ontologyPrefixAnnot "ro" .
<http://www.ebi.ac.uk/efo/swo/>
rdfs:label "Software Ontology"@en-US ;
vitro:ontologyPrefixAnnot "swo" .
vitro:ontologyPrefixAnnot "swo" .
vivo:pmcid
vitro:hiddenFromDisplayBelowRoleLevelAnnot
@ -2512,7 +2512,7 @@ obo:ERO_0000044
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
obo:ERO_0001261
vitro:inClassGroup <http://vivoweb.org/ontology#vitroClassGroupactivities> .
@ -2670,7 +2670,7 @@ obo:ERO_0000045
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
vivo:Division
vitro:displayLimitAnnot
"-1"^^xsd:int ;
@ -4642,7 +4642,7 @@ obo:ERO_0000482 # deprecated
# "true"^^xsd:boolean ;
# vitro:inPropertyGroupAnnot
# <http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
vivo:ResearchProposal
vitro:displayLimitAnnot
"-1"^^xsd:int ;
@ -5323,7 +5323,7 @@ geo:agriculturalAreaYear
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
vivo:providesFundingThrough
vitro:displayLimitAnnot
"5"^^xsd:int ;
@ -6188,7 +6188,7 @@ obo:ERO_0000033
"true"^^xsd:boolean ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoutreach> .
obo:ERO_0000397
vitro:displayLimitAnnot
"5"^^xsd:int ;
@ -7376,7 +7376,7 @@ obo:ERO_0000919
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
bibo:status
vitro:displayLimitAnnot
"5"^^xsd:int ;
@ -7460,7 +7460,7 @@ geo:validUntil
vitro:hiddenFromPublishBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
vivo:hasEquipment
vitro:displayRankAnnot
"80"^^xsd:int ;
@ -7518,37 +7518,37 @@ vivo:hasEquipment
vitro:displayRankAnnot
"1"^^xsd:int .
<http://purl.obolibrary.org/obo/RO_0000053>
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
<http://purl.obolibrary.org/obo/ARG_2000028>
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:relates
<http://purl.obolibrary.org/obo/RO_0000053>
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:relatedBy
<http://purl.obolibrary.org/obo/ARG_2000028>
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:assigns
vivo:relates
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:assignedBy
vivo:relatedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:assigns
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
vivo:assignedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot