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VIVO-539 fixes bug related to excessive duplication of certain webpage links after migration

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This commit is contained in:
brianjlowe 2013-11-18 14:29:26 -05:00
parent bcf395732e
commit 9168e7c761
28 changed files with 83 additions and 385 deletions
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29
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s a foaf:Person
FILTER (
EXISTS { ?s foaf:firstName ?firstName } ||
EXISTS { ?s foaf:lastName ?lastName } ||
EXISTS { ?s vivo:middleName ?middleName } ||
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage } ||
EXISTS { ?s vivo:preferredTitle ?preferredTitle } ||
EXISTS { ?s bibo:prefixName ?prefixName } ||
EXISTS { ?s bibo:suffixName ?suffixName }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

15
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0a.sparql
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@ -1,15 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s foaf:firstName ?firstName
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

15
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0b.sparql
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@ -1,15 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s foaf:lastName ?lastName
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:middleName ?middleName .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0d.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:email ?email .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0e.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0f.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0g.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0h.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0i.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0j.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

22
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1.sparql Normal file
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@ -0,0 +1,22 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s a foaf:Organization
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1d.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:email ?email .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1e.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1f.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1g.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1h.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1i.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1j.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

22
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2.sparql Normal file
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@ -0,0 +1,22 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s a foaf:Group
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2d.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:email ?email .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2e.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2f.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2g.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2h.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2i.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2j.sparql
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@ -1,16 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}