VIVO-978 clarify the instructions for alternative triple stores

config/example.applicationSetup.n3

@@ -86,8 +86,8 @@
 #    The SDB-based implementation is the default option. It reads its parameters
 #    from the runtime.properties file, for backward compatibility.
 #
-#    Other implementations are based on a local TDB instance, a Virtuoso endpoint, 
+#    Other implementations are based on a local TDB instance, a "standard" SPARQL 
-#    or a "standard" SPARQL endpoint, with parameters as shown.
+#    endpoint, or a Virtuoso endpoint, with parameters as shown.
 #
 
 :sdbContentTripleSource
@@ -100,22 +100,20 @@
 #    # May be an absolute path, or relative to the Vitro home directory.
 #    :hasTdbDirectory "tdbContentModels" .
 
-#:virtuosoContentTripleSource
-#    a   <java:edu.cornell.mannlib.vitro.webapp.triplesource.impl.virtuoso.ContentTripleSourceVirtuoso> ,
-#        <java:edu.cornell.mannlib.vitro.webapp.modules.tripleSource.ContentTripleSource> ;
-#    # The URI of Virtuoso's SPARQL endpoint.
-#    :hasEndpointURI "PUT_YOUR_VIRTUOSO_URI_HERE" ;
-#    # URI to use for SPARQL UPDATE calls against Virtuoso. If not specified,
-#    # the primary endpoint URI will be used.
-#    :hasUpdateEndpointURI "PUT_THE UPDATE_URI_HERE" .
-
 #:sparqlContentTripleSource
 #    a   <java:edu.cornell.mannlib.vitro.webapp.triplesource.impl.virtuoso.ContentTripleSourceSPARQL> ,
 #        <java:edu.cornell.mannlib.vitro.webapp.modules.tripleSource.ContentTripleSource> ;
 #    # The URI of the SPARQL endpoint for your triple-store.
 #    :hasEndpointURI "PUT_YOUR_SPARQL_ENDPOINT_URI_HERE" ;
-#    # URI to use for SPARQL UPDATE calls against your triple-store. If not 
+#    # The URI to use for SPARQL UPDATE calls against your triple-store. 
-#    # specified, the primary endpoint URI will be used.
+#    :hasUpdateEndpointURI "PUT_THE UPDATE_URI_HERE" .
+
+#:virtuosoContentTripleSource
+#    a   <java:edu.cornell.mannlib.vitro.webapp.triplesource.impl.virtuoso.ContentTripleSourceVirtuoso> ,
+#        <java:edu.cornell.mannlib.vitro.webapp.modules.tripleSource.ContentTripleSource> ;
+#    # The URI of Virtuoso's SPARQL endpoint.
+#    :hasEndpointURI "PUT_YOUR_VIRTUOSO_URI_HERE" ;
+#    # The URI to use for SPARQL UPDATE calls against Virtuoso. 
 #    :hasUpdateEndpointURI "PUT_THE UPDATE_URI_HERE" .
 
 

config/example.runtime.properties

@@ -107,7 +107,7 @@ VitroConnection.DataSource.pool.maxIdle = 10
 
 
 # -----------------------------------------------------------------------------
-# USING A DIFFERENT DATA STORE
+# USING A DIFFERENT DATABASE
 # -----------------------------------------------------------------------------
 
   #
@@ -118,20 +118,10 @@ VitroConnection.DataSource.dbtype = MySQL
 VitroConnection.DataSource.driver = com.mysql.jdbc.Driver
 VitroConnection.DataSource.validationQuery = SELECT 1
 
-  #
+  # Note: the above parameters allow you to change the relational database that 
-  # Optional URI of a SPARQL endpoint from which VIVO should display data. 
+  # is used as the back end for Jena SDB. If you want to use a triple store 
-  # If set, VIVO will use this endpoint as its triple store instead of the
+  # other than SDB, you will need to edit applicationSetup.n3. See the 
-  # SDB database.
+  # installation instructions for more details.
-  # 
-#VitroConnection.DataSource.endpointURI =
-
-  #
-  # Optional URI to use for modifying the above endpoint via SPARQL UPDATE.
-  # This setting is only necessary if the endpoint does not support updates via
-  # its main URI.  (This may be done for access control purposes.)
-  # If the endpointURI above is not set, this setting has no effect.
-  #
-#VitroConnection.DataSource.updateEndpointURI =
 
 
 # -----------------------------------------------------------------------------