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Merge branch 'maint-rel-1.6' into develop

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brianjlowe 2013-12-05 16:05:54 -05:00
commit b1f0b5c922
2 changed files with 188 additions and 52 deletions
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33
rdf/tbox/filegraph/data-properties.owl
View file

@ -1132,17 +1132,8 @@
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000004"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000008"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000009"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000020"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000161"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000162"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000285"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000630"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0001194"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0001200"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0400147"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
@ -1259,30 +1250,6 @@
<!-- http://purl.obolibrary.org/obo/ERO_0000405 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000405">
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melissa Haendel</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Melissa Haendel</obo:IAO_0000119>
<obo:IAO_0000112 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The accession number for a gene.</obo:IAO_0000112>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Unique identifier of a biological polymer sequence (DNA, RNA, protein) when it is submitted to a sequence database.</obo:IAO_0000115>
<obo:IAO_0000111 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">accession number</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000120"/>
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
<rdfs:domain>
<owl:Class>
<owl:unionOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000161"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000285"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000404"/>
</owl:unionOf>
</owl:Class>
</rdfs:domain>
</owl:DatatypeProperty>
<!-- http://purl.obolibrary.org/obo/ERO_0000424 -->
<owl:DatatypeProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000424">

207
rdf/tbox/firsttime/initialTBoxAnnotations.n3
View file

@ -1774,7 +1774,18 @@ vivo:Librarian
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
obo:ERO_0000050
rdfs:label "model number"@en-US .
rdfs:label "model number"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"76"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
geo:nameCurrencyFR
rdfs:label "nameCurrencyFR"@en-US ;
@ -1858,7 +1869,21 @@ bibo:accepted
rdfs:label "accepted"@en-US .
obo:ERO_0000070
rdfs:label "used by"@en-US .
rdfs:label "used by"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"15"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
vcard:Email
rdfs:label "Email"@en-US .
@ -2517,8 +2542,18 @@ bibo:identifier
"Unique identifier of a document or collection. This data property is not seen or updated by anyone."^^xsd:string .
obo:ERO_0000044
rdfs:label "has inventory number"@en-US .
rdfs:label "inventory number"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"70"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
obo:ERO_0001261
rdfs:label "Analysis Service"@en-US ;
vitro:inClassGroup <http://vivoweb.org/ontology#vitroClassGroupactivities> .
@ -2624,7 +2659,21 @@ bibo:Website
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
obo:ERO_0001057
rdfs:label "has preparation technique"@en-US .
rdfs:label "has preparation technique"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"53"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
obo:BFO_0000003
rdfs:label "Occurrent" .
@ -2693,10 +2742,6 @@ obo:ERO_0000045
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> .
@ -3945,7 +3990,23 @@ obo:ERO_0000572
rdfs:label "used to study"@en-US .
obo:RO_0001000
rdfs:label "derives from"@en-US .
rdfs:label "derives from"@en-US ;
## note -- has a "some values from" restriction on Organism <http://purl.obolibrary.org/obo/OBI_0100026>
vitro:displayLimitAnnot
"5"^^xsd:int ;
vitro:displayRankAnnot
"50"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
bibo:gtin14
rdfs:label "Global Trade Item Number (GTIN-14)"@en-US ;
@ -5673,7 +5734,22 @@ geo:nameShortEN
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
obo:RO_0003001
rdfs:label "produced by"@en-US .
rdfs:label "produced by"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"60"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
<http://purl.org/spar/c4o/hasGlobalCountSource>
rdfs:label "has global count source"@en-US ;
@ -5779,7 +5855,22 @@ vivo:hasSuccessorOrganization
"true"^^xsd:boolean .
obo:RO_0003000
rdfs:label "produces"@en-US .
rdfs:label "produces"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"63"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
vivo:prerequisiteFor
rdfs:label "prerequisite for"@en-US ;
@ -6050,7 +6141,22 @@ vcard:Muse
rdfs:label "Muse"@en-US .
obo:ERO_0000034
rdfs:label "has manufacturer"@en-US .
rdfs:label "manufacturer"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"73"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
geo:area
rdfs:label "Area"@en-US ;
@ -6461,7 +6567,22 @@ vivo:distributes
"true"^^xsd:boolean .
obo:OBI_0000304
rdfs:label "is manufactured by"@en-US .
rdfs:label "manufactured by"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"73"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
vcard:hasFormattedName
rdfs:label "has formatted name"@en-US .
@ -7160,7 +7281,22 @@ bibo:Statute
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
obo:ERO_0000405
rdfs:label "has accession number"@en-US .
rdfs:label "has accession number"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"10"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
vivo:fundingVehicleFor
rdfs:label "provides funding for"@en-US ;
@ -7241,7 +7377,21 @@ vivo:PostdoctoralTraining
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
obo:ERO_0000918
rdfs:label "related research project"@en-US .
rdfs:label "related research project"@en-US ;
vitro:displayLimitAnnot
"2"^^xsd:int ;
vitro:displayRankAnnot
"20"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
obo:OBI_0000417
rdfs:label "achieves planned objective"@en-US ;
@ -7303,7 +7453,21 @@ vcard:sound
rdfs:label "sound"@en-US .
obo:ERO_0000543
rdfs:label "related technique"@en-US .
rdfs:label "related technique"@en-US ;
vitro:displayLimitAnnot
"5"^^xsd:int ;
vitro:displayRankAnnot
"80"^^xsd:int ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> ;
vitro:inPropertyGroupAnnot
<http://vivoweb.org/ontology#vitroPropertyGroupoverview> ;
vitro:selectFromExistingAnnot
"true"^^xsd:boolean ;
vitro:offerCreateNewOptionAnnot
"true"^^xsd:boolean .
bibo:numPages
rdfs:label "number of pages"@en-US ;
@ -7435,7 +7599,7 @@ geo:GDPUnit
vitro:hiddenFromDisplayBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot
<http://vitro.mannlib.cornell.edu/ns/vitro/role#public> .
<http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody> .
bibo:edition
rdfs:label "edition"@en-US ;
@ -7642,4 +7806,9 @@ vivo:hasEquipment
"true"^^xsd:boolean .
<http://purl.obolibrary.org/obo/OBI_0100026>
rdfs:label "Organism"@en-US .
rdfs:label "Organism"@en-US ;
vitro:inClassGroup <http://vivoweb.org/ontology#vitroClassGrouppublications> ; ## classgroup label is research
vitro:displayRankAnnot
"1"^^xsd:int .