diff --git a/productMods/WEB-INF/ontologies/update/diff.tab.txt b/productMods/WEB-INF/ontologies/update/diff.tab.txt index d946c21b..a35f9ae0 100644 --- a/productMods/WEB-INF/ontologies/update/diff.tab.txt +++ b/productMods/WEB-INF/ontologies/update/diff.tab.txt @@ -1 +1 @@ -http://purl.org/NET/c4dm/event.owl#agent Delete z http://purl.org/NET/c4dm/event.owl#isAgentIn Delete z http://purl.org/NET/c4dm/event.owl#produced_in http://purl.obolibrary.org/obo/RO_0002353 Yes z http://purl.org/NET/c4dm/event.owl#product http://purl.obolibrary.org/obo/RO_0002234 Yes z http://purl.org/dc/elements/1.1/isVersionOf Delete z http://vivoweb.org/ontology/core#administeredBy Delete complex construct with grant administrator role http://purl.org/dc/terms/contributor Delete z http://purl.org/dc/terms/isReferencedBy Delete z http://purl.org/dc/terms/isVersionOf Delete z http://purl.org/dc/terms/publisher http://vivoweb.org/ontology/core#publisher Yes z http://purl.org/ontology/bibo/editor Delete z http://vivoweb.org/ontology/core#administers Delete complex construct with grant administrator role http://vivoweb.org/ontology/core#advisee Delete CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#adviseeIn Delete CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#advisingContributionTo Delete construct http://vivoweb.org/ontology/core#advisor Delete CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#advisorIn Delete CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#affiliatedOrganization Delete construct Relationship node? http://vivoweb.org/ontology/core#associatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#associatedWithPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#attendeeRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#authorInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardConferred http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#awardConferredBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#awardOrHonor http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardOrHonorFor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#awardsGrant http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#clinicalRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#co-PrincipalInvestigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#courseOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#credentialOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#currentMemberOf Delete construct MemberRole http://vivoweb.org/ontology/core#currentlyHeadOf Delete construct LeaderRole http://vivoweb.org/ontology/core#currentlyHeadedBy Delete construct LeaderRole http://vivoweb.org/ontology/core#degreeEarned http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#degreeOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#degreeOutcomeOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#domesticGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#domesticGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#editor Delete CC editorship http://vivoweb.org/ontology/core#editorOf Delete CC editorship http://vivoweb.org/ontology/core#editorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#educationalTraining http://purl.obolibrary.org/obo/RO_0000056 Yes z http://vivoweb.org/ontology/core#educationalTrainingOf http://purl.obolibrary.org/obo/RO_0000057 Yes z http://vivoweb.org/ontology/core#equipmentInFacility http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#eventWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#geographicLocationOf http://purl.obolibrary.org/obo/RO_0001015 Yes """location of""" http://vivoweb.org/ontology/core#geographicallyContains http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#geographicallyWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#grantAwardedBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#hasAttendeeRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasAttendeeRoleContext http://vivoweb.org/ontology/core#hasClinicalRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasClinicalRoleContext http://vivoweb.org/ontology/core#hasCo-PrincipalInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasCo-PrincipalInvestigatorRoleContext http://vivoweb.org/ontology/core#hasCollaborator http://vivoweb.org/ontology/core#relatedBy Yes CC construct Relationship http://vivoweb.org/ontology/core#hasCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#hasCurrentMember Delete construct MemberRole http://vivoweb.org/ontology/core#hasEditorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasEditorRoleContext http://vivoweb.org/ontology/core#hasGeographicLocation http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#hasInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasInvestigatorRoleContext http://vivoweb.org/ontology/core#hasLeaderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasLeaderRoleContext http://vivoweb.org/ontology/core#hasMemberRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasMemberRoleContext http://vivoweb.org/ontology/core#hasOrganizerRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasOrganizerRoleContext http://vivoweb.org/ontology/core#hasOutreachProviderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasOutreachProviderContext http://vivoweb.org/ontology/core#hasPart http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasPresenterRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasPresenterRoleContext http://vivoweb.org/ontology/core#hasPrincipalInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasPrincipalInvestigatorRoleContext http://vivoweb.org/ontology/core#hasResearcherRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasResearcherRoleContext http://vivoweb.org/ontology/core#hasReviewerRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasReviewerRoleContext http://vivoweb.org/ontology/core#hasRole http://purl.obolibrary.org/obo/RO_0000053 Yes z http://vivoweb.org/ontology/core#hasRoom http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#hasServiceProviderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasServiceProviderRoleContext http://vivoweb.org/ontology/core#hasSubGrant http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasSubOrganization http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasTeacherRole http://purl.obolibrary.org/obo/RO_0000053 Yes z http://vivoweb.org/ontology/core#inEventSeries http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#includesEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#informationProduct http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#informationProductOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#informationResourceInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#internationalGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#internationalGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#investigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes """inheres in""" http://vivoweb.org/ontology/core#issuanceOfCredential http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#issuedCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#leaderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#linkedAuthor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#linkedInformationResource http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#locationOfEquipment http://purl.obolibrary.org/obo/RO_0001015 Yes z http://vivoweb.org/ontology/core#mailingAddress Delete VCard http://vivoweb.org/ontology/core#mailingAddressFor Delete VCard http://vivoweb.org/ontology/core#memberRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#offersCourse http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#offersDegree http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#organizationForPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#organizationForTraining http://purl.obolibrary.org/obo/RO_0000056 Yes z http://vivoweb.org/ontology/core#organizerRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#outcome http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#outcomeOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#outreachProviderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#partOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#personInPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#positionForPerson http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#positionInOrganization http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#presenterRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#principalInvestigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#providesService http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#realizedRole http://purl.obolibrary.org/obo/BFO_0000055 Yes """realizes""" http://vivoweb.org/ontology/core#receipt http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#receiptOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#relatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#researcherRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#reviewerRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#roleIn http://purl.obolibrary.org/obo/BFO_0000054 Yes """realized in"" (or delete, since there should be subs?)" http://vivoweb.org/ontology/core#roleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#roleRealizedIn http://purl.obolibrary.org/obo/BFO_0000054 Yes z http://vivoweb.org/ontology/core#roomWithinBuilding http://purl.obolibrary.org/obo/RO_0001025 Yes z http://vivoweb.org/ontology/core#seriesForEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#serviceProvidedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#serviceProviderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#subGrantOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#subOrganizationWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#teacherRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#trainingAtOrganization http://purl.obolibrary.org/obo/RO_0000057 Yes z http://vivoweb.org/ontology/core#authorRank http://vivoweb.org/ontology/core#rank Yes z http://vivoweb.org/ontology/core#preferredTitle Delete z http://vivoweb.org/ontology/core#EducationalTraining http://vivoweb.org/ontology/core#EducationalProcess Yes z http://vivoweb.org/ontology/core#ServiceProviderRole http://purl.obolibrary.org/obo/ERO_0000012 Yes z http://vivoweb.org/ontology/core#URLLink http://www.w3.org/2006/vcard/ns#URL Yes z \ No newline at end of file +http://purl.org/NET/c4dm/event.owl#agent Delete z http://purl.org/NET/c4dm/event.owl#isAgentIn Delete z http://purl.org/NET/c4dm/event.owl#produced_in http://purl.obolibrary.org/obo/RO_0002353 Yes z http://purl.org/NET/c4dm/event.owl#product http://purl.obolibrary.org/obo/RO_0002234 Yes z http://purl.org/dc/elements/1.1/isVersionOf Delete z http://vivoweb.org/ontology/core#administeredBy Delete complex construct with grant administrator role http://purl.org/dc/terms/contributor Delete z http://purl.org/dc/terms/isReferencedBy Delete z http://purl.org/dc/terms/isVersionOf Delete z http://purl.org/dc/terms/publisher http://vivoweb.org/ontology/core#publisher Yes z http://purl.org/ontology/bibo/editor Delete z http://vivoweb.org/ontology/core#administers Delete complex construct with grant administrator role http://vivoweb.org/ontology/core#advisee Delete CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#adviseeIn Delete CC - advising relationship plus add advisee role http://vivoweb.org/ontology/core#advisingContributionTo Delete construct http://vivoweb.org/ontology/core#advisor Delete CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#advisorIn Delete CC - advising relationship plus add advisor role http://vivoweb.org/ontology/core#affiliatedOrganization Delete construct Relationship node? http://vivoweb.org/ontology/core#associatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#associatedWithPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#attendeeRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#authorInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardConferred http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#awardConferredBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#awardOrHonor http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#awardOrHonorFor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#awardsGrant http://vivoweb.org/ontology/core#assigns Yes z http://vivoweb.org/ontology/core#clinicalRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#co-PrincipalInvestigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#courseOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#credentialOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#currentMemberOf Delete construct MemberRole http://vivoweb.org/ontology/core#currentlyHeadOf Delete construct LeaderRole http://vivoweb.org/ontology/core#currentlyHeadedBy Delete construct LeaderRole http://vivoweb.org/ontology/core#degreeEarned http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#degreeOfferedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#degreeOutcomeOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#domesticGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#domesticGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#editor Delete CC editorship http://vivoweb.org/ontology/core#editorOf Delete CC editorship http://vivoweb.org/ontology/core#editorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#educationalTraining http://purl.obolibrary.org/obo/RO_0000056 Yes z http://vivoweb.org/ontology/core#educationalTrainingOf http://purl.obolibrary.org/obo/RO_0000057 Yes z http://vivoweb.org/ontology/core#equipmentInFacility http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#eventWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#geographicLocationOf http://purl.obolibrary.org/obo/RO_0001015 Yes """location of""" http://vivoweb.org/ontology/core#geographicallyContains http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#geographicallyWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#grantAwardedBy http://vivoweb.org/ontology/core#assignedBy Yes z http://vivoweb.org/ontology/core#hasAttendeeRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasAttendeeRoleContext http://vivoweb.org/ontology/core#hasClinicalRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasClinicalRoleContext http://vivoweb.org/ontology/core#hasCo-PrincipalInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasCo-PrincipalInvestigatorRoleContext http://vivoweb.org/ontology/core#hasCollaborator Delete CC construct Relationship http://vivoweb.org/ontology/core#hasCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#hasCurrentMember Delete construct MemberRole http://vivoweb.org/ontology/core#hasEditorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasEditorRoleContext http://vivoweb.org/ontology/core#hasGeographicLocation http://purl.obolibrary.org/obo/RO_0001025 Yes """located in""" http://vivoweb.org/ontology/core#hasInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasInvestigatorRoleContext http://vivoweb.org/ontology/core#hasLeaderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasLeaderRoleContext http://vivoweb.org/ontology/core#hasMemberRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasMemberRoleContext http://vivoweb.org/ontology/core#hasOrganizerRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasOrganizerRoleContext http://vivoweb.org/ontology/core#hasOutreachProviderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasOutreachProviderContext http://vivoweb.org/ontology/core#hasPart http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasPresenterRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasPresenterRoleContext http://vivoweb.org/ontology/core#hasPrincipalInvestigatorRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasPrincipalInvestigatorRoleContext http://vivoweb.org/ontology/core#hasResearcherRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasResearcherRoleContext http://vivoweb.org/ontology/core#hasReviewerRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasReviewerRoleContext http://vivoweb.org/ontology/core#hasRole http://purl.obolibrary.org/obo/RO_0000053 Yes z http://vivoweb.org/ontology/core#hasRoom http://purl.obolibrary.org/obo/BFO_0000051 Yes """has part""" http://vivoweb.org/ontology/core#hasServiceProviderRole http://purl.obolibrary.org/obo/RO_0000053 Yes cc:hasServiceProviderRoleContext http://vivoweb.org/ontology/core#hasSubGrant http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasSubOrganization http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#hasTeacherRole http://purl.obolibrary.org/obo/RO_0000053 Yes z http://vivoweb.org/ontology/core#inEventSeries http://purl.obolibrary.org/obo/BFO_0000050 Yes """part of""" http://vivoweb.org/ontology/core#includesEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#informationProduct http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#informationProductOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#informationResourceInAuthorship http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#internationalGeographicFocus http://vivoweb.org/ontology/core#geographicFocus Yes z http://vivoweb.org/ontology/core#internationalGeographicFocusOf http://vivoweb.org/ontology/core#geographicFocusOf Yes z http://vivoweb.org/ontology/core#investigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes """inheres in""" http://vivoweb.org/ontology/core#issuanceOfCredential http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#issuedCredential http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#leaderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#linkedAuthor http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#linkedInformationResource http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#locationOfEquipment http://purl.obolibrary.org/obo/RO_0001015 Yes z http://vivoweb.org/ontology/core#mailingAddress Delete VCard http://vivoweb.org/ontology/core#mailingAddressFor Delete VCard http://vivoweb.org/ontology/core#memberRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#offersCourse http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#offersDegree http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#organizationForPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#organizationForTraining http://purl.obolibrary.org/obo/RO_0000056 Yes z http://vivoweb.org/ontology/core#organizerRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#outcome http://purl.obolibrary.org/obo/RO_0002234 Yes z http://vivoweb.org/ontology/core#outcomeOf http://purl.obolibrary.org/obo/RO_0002353 Yes z http://vivoweb.org/ontology/core#outreachProviderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#partOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#personInPosition http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#positionForPerson http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#positionInOrganization http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#presenterRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#principalInvestigatorRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#providesService http://vivoweb.org/ontology/core#offers Yes z http://vivoweb.org/ontology/core#realizedRole http://purl.obolibrary.org/obo/BFO_0000055 Yes """realizes""" http://vivoweb.org/ontology/core#receipt http://vivoweb.org/ontology/core#relatedBy Yes z http://vivoweb.org/ontology/core#receiptOf http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#relatedRole http://vivoweb.org/ontology/core#relates Yes z http://vivoweb.org/ontology/core#researcherRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#reviewerRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#roleIn http://purl.obolibrary.org/obo/BFO_0000054 Yes """realized in"" (or delete, since there should be subs?)" http://vivoweb.org/ontology/core#roleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#roleRealizedIn http://purl.obolibrary.org/obo/BFO_0000054 Yes z http://vivoweb.org/ontology/core#roomWithinBuilding http://purl.obolibrary.org/obo/RO_0001025 Yes z http://vivoweb.org/ontology/core#seriesForEvent http://purl.obolibrary.org/obo/BFO_0000051 Yes z http://vivoweb.org/ontology/core#serviceProvidedBy http://vivoweb.org/ontology/core#offeredBy Yes z http://vivoweb.org/ontology/core#serviceProviderRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#subGrantOf http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#subOrganizationWithin http://purl.obolibrary.org/obo/BFO_0000050 Yes z http://vivoweb.org/ontology/core#teacherRoleOf http://purl.obolibrary.org/obo/RO_0000052 Yes z http://vivoweb.org/ontology/core#trainingAtOrganization http://purl.obolibrary.org/obo/RO_0000057 Yes z http://vivoweb.org/ontology/core#authorRank http://vivoweb.org/ontology/core#rank Yes z http://vivoweb.org/ontology/core#preferredTitle Delete z http://vivoweb.org/ontology/core#EducationalTraining http://vivoweb.org/ontology/core#EducationalProcess Yes z http://vivoweb.org/ontology/core#ServiceProviderRole http://purl.obolibrary.org/obo/ERO_0000012 Yes z http://vivoweb.org/ontology/core#URLLink http://www.w3.org/2006/vcard/ns#URL Yes z \ No newline at end of file diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/Editorship.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/Editorship.sparql index 0720c346..8f455b44 100644 --- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/Editorship.sparql +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/Editorship.sparql @@ -13,5 +13,6 @@ CONSTRUCT { ?person vivo:editorOf ?document } UNION { ?document vivo:editor ?person + FILTER NOT EXISTS { ?person vivo:editorOf ?document } } } diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/LeaderRole.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/LeaderRole.sparql index f9582fae..c32796b1 100644 --- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/LeaderRole.sparql +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/LeaderRole.sparql @@ -11,5 +11,7 @@ CONSTRUCT { } WHERE { { ?person vivo:currentlyHeadOf ?org } UNION - { ?org vivo:currentlyHeadedBy ?person } + { ?org vivo:currentlyHeadedBy ?person + FILTER NOT EXISTS { ?person vivo:currentlyHeadOf ?org } + } } diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/MemberRole.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/MemberRole.sparql index c9582a84..67e06173 100644 --- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/MemberRole.sparql +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/MemberRole.sparql @@ -11,5 +11,7 @@ CONSTRUCT { } WHERE { { ?person vivo:currentMemberOf ?org } UNION - { ?org vivo:hasCurrentMember ?person } + { ?org vivo:hasCurrentMember ?person + FILTER NOT EXISTS { ?person vivo:currentMemberOf ?org } + } } diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/collabRelationship.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/collabRelationship.sparql new file mode 100644 index 00000000..0aded656 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/collabRelationship.sparql @@ -0,0 +1,17 @@ +PREFIX vivo: +PREFIX owl: +PREFIX foaf: + +CONSTRUCT { + ?person1 vivo:relatedBy _:relationship . + ?person2 vivo:relatedBy _:relationship . + _:relationship vivo:relates ?person1 . + _:relationship vivo:relates ?person2 . +} WHERE { + { ?person1 vivo:hasCollaborator ?person2 + FILTER NOT EXISTS { + ?person1 vivo:relatedBy ?relationship . + ?relationship vivo:relates ?person2 + } + } +} diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grant-pre.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grant-pre.sparql new file mode 100644 index 00000000..426b75a1 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grant-pre.sparql @@ -0,0 +1,11 @@ +PREFIX vivo: +PREFIX owl: +PREFIX foaf: + +CONSTRUCT { + ?role vivo:relatedBy ?grant . + ?grant vivo:relates ?role +} WHERE { + ?role vivo:roleContributesTo ?grant . + ?grant a vivo:Grant . +} diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grantAdmin.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grantAdmin.sparql index 123edd1c..10607fc9 100644 --- a/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grantAdmin.sparql +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grantAdmin.sparql @@ -13,5 +13,7 @@ CONSTRUCT { } WHERE { { ?agent vivo:administers ?grant } UNION - { ?grant vivo:administeredBy ?agent } + { ?grant vivo:administeredBy ?agent + FILTER NOT EXISTS { ?agent vivo:administers ?grant } + } } diff --git a/productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/grant-pre-del.sparql b/productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/grant-pre-del.sparql new file mode 100644 index 00000000..a0276127 --- /dev/null +++ b/productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/grant-pre-del.sparql @@ -0,0 +1,11 @@ +PREFIX vivo: +PREFIX owl: +PREFIX foaf: + +CONSTRUCT { + ?role vivo:roleContributesTo ?grant . + ?grant vivo:contributingRole ?role . +} WHERE { + ?role vivo:roleContributesTo ?grant . + ?grant a vivo:Grant . +}