litvinovg/vivo
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

VIVO-351 restriction on has contact info for Organization, and VIVO-286 improvements to property visibility (in progress)

Browse source
This commit is contained in:
brianjlowe 2013-10-11 11:34:07 -04:00
parent 0f3a4653ab
commit d8757ffcbe
18 changed files with 7617 additions and 17442 deletions
Download patch file Download diff file Expand all files Collapse all files

10
rdf/tbox/filegraph/agent.owl
View file

@ -65,14 +65,6 @@
<!-- http://purl.obolibrary.org/obo/OBI_0000316 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/OBI_0000316"/>
<!-- http://purl.obolibrary.org/obo/RO_0000052 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000052"/>
@ -172,7 +164,7 @@
</owl:unionOf>
</owl:Class>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000316"/>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000571"/>
</owl:Restriction>
</owl:intersectionOf>

14
rdf/tbox/filegraph/appControls-temp.n3
View file

@ -64,4 +64,18 @@ foaf:Person
[ a owl:Restriction ;
owl:onProperty <http://vivoweb.org/ontology/core#hasResearchArea> ;
owl:allValuesFrom <http://www.w3.org/2004/02/skos/core#Concept>
] ;
rdfs:subClassOf
[ a owl:Restriction ;
owl:onProperty <http://vivoweb.org/ontology/core#freetextKeyword> ;
owl:allValuesFrom <http://www.w3.org/2001/XMLSchema#string>
] .
foaf:Organization
rdfs:subClassOf
[ a owl:Restriction ;
owl:onProperty <http://purl.obolibrary.org/obo/ARG_2000028> ;
owl:someValuesFrom <http://www.w3.org/2006/vcard/ns#Organization>
] .

4
rdf/tbox/filegraph/classes-additional.owl
View file

@ -844,7 +844,7 @@
<owl:equivalentClass>
<owl:Restriction>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#awardsGrant"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#assigns"/>
<owl:someValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</owl:Restriction>
</owl:equivalentClass>
@ -1138,7 +1138,7 @@
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasSubOrganization"/>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
<owl:allValuesFrom rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
</owl:Restriction>
</rdfs:subClassOf>

104
rdf/tbox/filegraph/dataDomains.rdf Normal file
View file

@ -0,0 +1,104 @@
<rdf:RDF
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vcard="http://www.w3.org/2006/vcard/ns#"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#researcherId">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#pmcid">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Article"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#localAwardId">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#eRACommonsId">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#nihmsid">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Article"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#iclCode">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Patent"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#isCorrespondingAuthor">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#grantDirectCosts">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#majorField">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#EducationalProcess"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#overview">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#researchOverview">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#cclCode">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Patent"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#seatingCapacity">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Room"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#reportId">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Report"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#sponsorAwardId">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#licenseNumber">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Licensure"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#departmentOrSchool">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#EducationalProcess"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#dateTime">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#DateTimeValue"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#middleName">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#teachingOverview">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hrJobTitle">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Position"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#patentNumber">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Patent"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#totalAwardAmount">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#outreachOverview">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#scopusId">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</rdf:Description>
</rdf:RDF>

15
rdf/tbox/filegraph/object-properties.owl
View file

@ -1178,19 +1178,6 @@ there is a measurement process p that has specified output m, a measurement datu
<!-- http://purl.org/obo/owl/OBO_REL#role_of -->
<owl:ObjectProperty rdf:about="http://purl.org/obo/owl/OBO_REL#role_of">
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A relation between a role R and an entity E. R role_of E iff: R inheres_in E and R is a role</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GROUP:OBI:&lt;http://obi.sourceforge.net&gt;</obo:IAO_0000117>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PERSON: Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000111 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">role_of</obo:IAO_0000111>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000316"/>
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000052"/>
<obo:IAO_0000412 rdf:resource="http://purl.org/obo/owl/ro_proposed"/>
</owl:ObjectProperty>
<!-- http://purl.org/ontology/bibo/affirmedBy -->
@ -1725,7 +1712,7 @@ there is a measurement process p that has specified output m, a measurement datu
<!-- http://vivoweb.org/ontology/core#translatorOf -->
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/core#translatorOf">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
</owl:ObjectProperty>

29
rdf/tbox/filegraph/object-properties3.owl
View file

@ -514,17 +514,6 @@
<!-- http://vivoweb.org/ontology/core#researcherRoleOf -->
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/core#researcherRoleOf">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#ResearcherRole"/>
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#roleOf"/>
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</owl:ObjectProperty>
<!-- http://vivoweb.org/ontology/core#reviewedIn -->
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/core#reviewedIn">
@ -535,23 +524,11 @@
<!-- http://vivoweb.org/ontology/core#reviewerRoleOf -->
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/core#reviewerRoleOf">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#ReviewerRole"/>
<owl:inverseOf rdf:resource="http://vivoweb.org/ontology/core#hasReviewerRole"/>
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#roleOf"/>
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
</owl:ObjectProperty>
<!-- http://vivoweb.org/ontology/core#roleContributesTo -->
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/core#roleContributesTo">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<owl:inverseOf rdf:resource="http://vivoweb.org/ontology/core#contributingRole"/>
</owl:ObjectProperty>
@ -677,7 +654,7 @@
<!-- http://purl.org/ontology/bibo/abstract -->
<owl:DatatypeProperty rdf:about="http://purl.org/ontology/bibo/abstract">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
</owl:DatatypeProperty>
@ -685,7 +662,7 @@
<!-- http://purl.org/ontology/bibo/doi -->
<owl:DatatypeProperty rdf:about="http://purl.org/ontology/bibo/doi">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
</owl:DatatypeProperty>

41
rdf/tbox/filegraph/objectDomains.rdf Normal file
View file

@ -0,0 +1,41 @@
<rdf:RDF
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vcard="http://www.w3.org/2006/vcard/ns#"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#translatorOf">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#geographicLocationOf">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#GeographicLocation"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasSuccessorOrganization">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#features">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
</rdf:Description>
</rdf:RDF>

53
rdf/tbox/filegraph/objectRanges.rdf Normal file
View file

@ -0,0 +1,53 @@
<rdf:RDF
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vcard="http://www.w3.org/2006/vcard/ns#"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#translatorOf">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasSuccessorOrganization">
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#reviewedIn">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Review"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#awardsGrant">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasFundingVehicle">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Grant"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasFacility">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Facility"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#dateTimePrecision">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#DateTimeValuePrecision"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/core#hasGoverningAuthority">
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
</rdf:Description>
</rdf:RDF>

2
rdf/tbox/filegraph/research-resource.owl
View file

@ -97,7 +97,7 @@
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000094"/>
</owl:Restriction>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/OBI_0000316"/>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000053"/>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/OBI_0000086"/>
</owl:Restriction>
</owl:intersectionOf>