litvinovg/vivo
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity Actions

Merge branch 'develop' of https://github.com/vivo-project/VIVO into develop

Browse source
This commit is contained in:
Holly Mistlebauer 2013-11-08 11:04:59 -05:00
commit ec5e81f75c
237 changed files with 8151 additions and 3172 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

8
config/example.runtime.properties
View file

@ -143,7 +143,13 @@ visualization.temporal = enabled
# The format for this property is id, name; id1, name1; id2, name2 etc.
# See Service Metadata from this page http://code.google.com/p/google-refine/wiki/ReconciliationServiceApi
# for more information.
Vitro.reconcile.defaultTypeList = http://vivoweb.org/ontology/core#Role, core:Role; http://vivoweb.org/ontology/core#AcademicDegree, core:Academic Degree; http://purl.org/NET/c4dm/event.owl#Event, event:Event; http://vivoweb.org/ontology/core#Agreement, core:Agreement; http://vivoweb.org/ontology/core#Location, core:Location; http://xmlns.com/foaf/0.1/Organization, foaf:Organization; http://xmlns.com/foaf/0.1/Person, foaf:Person; http://vivoweb.org/ontology/core#InformationResource, core:Information Resource
Vitro.reconcile.defaultTypeList = http://vivoweb.org/ontology/core#Role, core:Role; \
http://vivoweb.org/ontology/core#AcademicDegree, core:Academic Degree; \
http://purl.org/NET/c4dm/event.owl#Event, event:Event; \
http://vivoweb.org/ontology/core#Location, core:Location; \
http://xmlns.com/foaf/0.1/Organization, foaf:Organization; \
http://xmlns.com/foaf/0.1/Person, foaf:Person; \
http://purl.obolibrary.org/obo/IAO_0000030, obo:IAO_0000030
#
# Types of individual for which we can create proxy editors.

39
doc/install.html
View file

@ -339,6 +339,25 @@ issuing SPARQL queries that read data, and its URI for issuing SPARQL UPDATE com
es_MX
</td>
</tr>
<tr>
<td colspan="2">
These values are used when deploying VIVO as an OpenSocial container
and integrating with OpenSocial gadgets
(see <a href="#opensocial">Step 13</a>, below). If you are creating
a VIVO installation that does not use OpenSocial gadgets, these values are omitted.
</td>
</tr>
<tr class="odd_row">
<td>
OpenSocial.shindigURL<br>
OpenSocial.tokenService<br>
OpenSocial.tokenKeyFile<br>
OpenSocial.sandbox
</td>
<td>
&nbsp;
</td>
</tr>
</tbody>
</table>
@ -938,26 +957,6 @@ issuing SPARQL queries that read data, and its URI for issuing SPARQL UPDATE com
</td>
</tr>
<tr>
<td colspan="2">
These values are used when deploying VIVO as an OpenSocial container
and integrating with OpenSocial gadgets
(see <a href="#opensocial">Step 13</a>, below). If you are creating
a VIVO installation that does not use OpenSocial gadgets, these values are omitted.
</td>
</tr>
<tr class="odd_row">
<td>
OpenSocial.shindigURL<br>
OpenSocial.tokenService<br>
OpenSocial.tokenKeyFile<br>
OpenSocial.sandbox
</td>
<td>
&nbsp;
</td>
</tr>
</tbody>
</table>

16
doc/setting_up_orng.html
View file

@ -188,7 +188,7 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
<h3 id="vivo_settings">I.iv Configure VIVO</h3>
<p>
In the VIVO home directory, the file called <em>runtime.properties</em>
In the VIVO distribution directory, the file called <em>build.properties</em>
contains configuration options for the VIVO application.
You must set some additional parameters so VIVO will be able to communicate with Shindig-ORNG.
</p>
@ -333,7 +333,7 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
<ul>
<li>
VIVO was not re-deployed with <tt>ant deploy</tt> after the OpenSocial
values were set in <em>runtime.properties</em>
values were set in <em>build.properties</em>
</li>
</ul>
</td>
@ -405,7 +405,7 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
<td>
<ul>
<li>
<em>OpenSocial.tokenKeyFile</em> is not set in <em>runtime.properties</em>,
<em>OpenSocial.tokenKeyFile</em> is not set in <em>build.properties</em>,
or the file does not exist at the specified location.
</li>
</ul>
@ -449,7 +449,7 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
<td>
<ul>
<li>
In <em>runtime.properties</em>, <em>OpenSocial.tokenService</em> is not set correctly.
In <em>build.properties</em>, <em>OpenSocial.tokenService</em> is not set correctly.
</li>
</ul>
</td>
@ -692,11 +692,11 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
<h3 id="redeploying">III.i. Re-running the deployment script</h2>
<p>
The OpenSocial framework relies on several of the settings in the <em>runtime.properties</em> file,
The OpenSocial framework relies on several of the settings in the <em>build.properties</em> and <em>runtime.properties</em> files,
in addition to the ones that are explicitly linked to it.
</p>
<p>
Each time you change the settings in <em>runtime.properties</em>, you should re-deploy
Each time you change the settings in <em>build.properties</em> or <em>runtime.properties</em>, you should re-deploy
the framework with
<pre> ant orng</pre>
</p>
@ -750,12 +750,12 @@ set CATALINA_OPTS=-Dshindig.host=localhost -Dshindig.port=8080 -Djava.awt.headle
Disabling the gadgets, as above, will remove essentially all of the OpenSocial processing
within VIVO. To remove the remainder of it, you can disable the connection between
VIVO and the OpenSocial service. Do this by removing or commenting
the <em>OpenSocial</em> properties in <em>runtime.properties</em>
the <em>OpenSocial</em> properties in <em>build.properties</em>
(see <a href="#vivo_settings">section I.iv. Configure VIVO</a>).
</p>
<p>
Restart Tomcat to make this change take effect.
To make this change take effect, re-deploy VIVO and restart Tomcat.
</p>
<h4>Remove the OpenSocial webapp from Tomcat</h4>

178
doc/upgrade-1.6.html
View file

@ -51,6 +51,7 @@
<li><a href="#rdffiles">Auto-loaded RDF files move to the Home directory</a></li>
<li><a href="#language">Support for additional languages</a></li>
<li><a href="#extended_lod">More compact responses to Linked data requests</a></li>
<li><a href="#google_refine">Changes to default types for Google Refine</a></li>
</ol>
</li>
<li><a href="#upgrade_process">Upgrade Instructions</a></li>
@ -143,7 +144,9 @@
<li><code>webapp.name</code></li>
</ul>
</p>
</li>
<li>
<h4 id="solr_insecure">Solr is no longer secured</h4>
<p>
In previous releases, Solr was deployed to Tomcat with a <code>RemoteAddrValve</code>
@ -163,7 +166,9 @@
<p>
Sites that need to secure Solr are now left to their own devices.
</p>
</li>
<li>
<h4 id="log4j_properties">Log4J properties file renamed</h4>
<p>
In previous releases, the properties file for the VIVO logging system
@ -175,7 +180,9 @@
Note that <code>debug.log4j.properties</code>, if present, will still
override the default.
</p>
</li>
<li>
<h4 id="tabMenu">Property groups now displayed in a tab format, including a "View All" tab</h4>
<p>
With release 1.6, the property group menu bar that was used on profile pages has been replaced
@ -183,7 +190,9 @@
within that group while the contents of the previously displayed group will be hidden. The array of
tabs also includes a "View All" tab that, when clicked, displays the contents of all the property groups.
</p>
</li>
<li>
<h4 id="sparqlDataGetters">Class-specific SPARQL Query Data Getters</h4>
<p>
The VIVO software now supports the development of SPARQL query data getters that can be associated
@ -195,7 +204,9 @@
data getters:
<code>https://wiki.duraspace.org/display/VIVO/Enriching+VIVO+Content+Using+SPARQL+Query+Data+Getters</code>.
</p>
</li>
<li>
<h4 id="foafPersonTemplate">The foaf:Person template has been re-located.</h4>
<p>
The template individual--foaf-person.ftl has been moved to the "templates" subdirectory in the wilma
@ -204,7 +215,9 @@
theme directory or, if your installation does not have it's own theme directory, in the
<code>themes/wilma/templates subdirectory</code>.
</p>
</li>
<li>
<h4 id="multiple">Multiple foaf:Person Profile Pages</h4>
<p>
VIVO now supports multiple profile pages for foaf:Persons. This feature, which is optional so installations
@ -218,7 +231,9 @@
Websnapr.) For more information on how to implement multiple profile page views, refer to this wiki page:
<code>https://wiki.duraspace.org/display/VIVO/Multiple+foaf%3APerson+Profile+Pages</code>.
</p>
</li>
<li>
<h4 id="homePage">Home Page Re-design</h4>
<p>
For Release 1.6 the VIVO Home Page has been redesigned. The Search field beneath the "welcome" text now
@ -229,7 +244,9 @@
activities and organizations; and, <a href="#optionalMap">optionally</a> a global map showing researchers'
areas of geographic focus.
</p>
</li>
<li>
<h4 id="rdffiles">Auto-loaded RDF files move to the Home directory</h4>
<p>
The RDF files that initialize the data model have moved, in both the distribution and
@ -243,97 +260,59 @@
the new locations accordingly.
</p>
<h5>Old locations of RDF files</h5>
<pre>/WEB-INF/ontologies/app/application.owl
/WEB-INF/ontologies/app/aboutPage.n3
/WEB-INF/ontologies/app/menu.n3
/WEB-INF/ontologies/app/profilePageType.n3
/WEB-INF/ontologies/app/loadedAtStartup/displayModelListViews.rdf
/WEB-INF/ontologies/app/loadedAtStartup/homePageDataGetters.n3
/WEB-INF/ontologies/app/loadedAtStartup/localeSelectionGUI.n3
/WEB-INF/ontologies/app/loadedAtStartup/vivoListViewConfig.rdf
/WEB-INF/ontologies/app/loadedAtStartup/vivoOrganizationDataGetters.n3
/WEB-INF/ontologies/app/loadedAtStartup/vivoSearchProhibited.n3
/WEB-INF/ontologies/app/menuload/displayTBOX.n3
/WEB-INF/ontologies/app/menuload/displayDisplay.n3
/WEB-INF/init-data/initialSiteConfig.rdf
/WEB-INF/ontologies/user/abox/geopolitical.ver1.1-11-18-11-individual-labels.rdf
/WEB-INF/ontologies/user/abox/vocabularySource-labels.n3
/WEB-INF/ontologies/user/tbox/vitro-0.7-annotations.rdf
/WEB-INF/ontologies/user/tbox/geopolitical-ver1.1-11-18-11-annotations.rdf
/WEB-INF/ontologies/user/tbox/scires-1.5-annotations.rdf
/WEB-INF/ontologies/user/tbox/vivo-core-1.5-annotations.rdf
/WEB-INF/ontologies/user/tbox/isDefinedBy-1.5-annotations.rdf
/WEB-INF/ontologies/user/applicationMetadata/propertygroups.rdf
/WEB-INF/ontologies/user/applicationMetadata/classgroups.rdf
/WEB-INF/filegraph/abox/us-states.rdf
/WEB-INF/filegraph/abox/geopolitical.abox.ver1.1-11-18-11.owl
/WEB-INF/filegraph/abox/academicDegree.rdf
/WEB-INF/filegraph/abox/documentStatus.owl
/WEB-INF/filegraph/abox/continents.n3
/WEB-INF/filegraph/abox/vocabularySource.n3
/WEB-INF/filegraph/abox/dateTimeValuePrecision.owl
/WEB-INF/filegraph/tbox/vitroPublic.owl
/WEB-INF/filegraph/tbox/vivo-dcterms-1.5.owl
/WEB-INF/filegraph/tbox/scires-1.5.owl
/WEB-INF/filegraph/tbox/vivo-core-1.5.owl
/WEB-INF/filegraph/tbox/vivo-c4o-1.5.owl
/WEB-INF/filegraph/tbox/geopolitical.tbox.ver1.1-11-18-11.owl
/WEB-INF/filegraph/tbox/vivo-fabio-1.5.owl
/WEB-INF/filegraph/tbox/vivo-skos-1.5.owl
/WEB-INF/filegraph/tbox/vivo-event-1.5.owl
/WEB-INF/filegraph/tbox/vivo-foaf-1.5.owl
/WEB-INF/filegraph/tbox/vitro-0.7.owl
/WEB-INF/filegraph/tbox/vivo-pws-1.5.owl
/WEB-INF/filegraph/tbox/isDefinedBy-1.5.owl
/WEB-INF/filegraph/tbox/vivo-dcelements-1.5.owl
/WEB-INF/filegraph/tbox/vivo-bibo-1.5.owl</pre>
<table>
<tr>
<th>Old locations of RDF files<br/>under [Vitro]/webapp/web or [VIVO]/productMods</th>
<th>New locations of RDF files<br/>under [Vitro]/webapp/rdf or [VIVO]/rdf</th>
<th>Comments</th>
</tr>
<tr>
<td>WEB-INF/ontologies/app/</td>
<td>rdf/display/firsttime/</td>
<td></td>
</tr>
<tr>
<td>WEB-INF/ontologies/app/loadedAtStartup/</td>
<td>rdf/display/everytime/</td>
<td></td>
</tr>
<tr>
<td>WEB-INF/ontologies/app/menuload/displayTBOX.n3</td>
<td>rdf/displayTbox/everytime/</td>
<td>Was one file, now a directory</td>
</tr>
<tr>
<td>/WEB-INF/ontologies/app/menuload/displayDisplay.n3</td>
<td>rdf/displayDisplay/everytime/</td>
<td>Was one file, now a directory</td>
</tr>
<tr>
<td>WEB-INF/ontologies/user/applicationMetadata/<br/>WEB-INF/init-data/</td>
<td>rdf/applicationMetadata/firsttime/</td>
<td>Merged directories</td>
</tr>
<tr>
<td>WEB-INF/ontologies/user/abox/</td>
<td>rdf/abox/firsttime/</td>
<td></td>
</tr>
<tr>
<td>WEB-INF/filegraph/abox/</td>
<td>rdf/abox/filegraph/</td>
<td></td>
</tr>
<tr>
<td>WEB-INF/ontologies/user/tbox/</td>
<td>rdf/tbox/firsttime/</td>
<td></td>
</tr>
<tr>
<td>WEB-INF/filegraph/tbox/</td>
<td>rdf/tbox/filegraph/</td>
<td></td>
</tr>
</table>
<h5>New locations of RDF files</h5>
<pre>rdf/display/firsttime/aboutPage.n3
rdf/display/firsttime/application.owl
rdf/display/firsttime/menu.n3
rdf/display/firsttime/profilePageType.n3
rdf/display/everytime/displayModelListViews.rdf
rdf/display/everytime/homePageDataGetters.n3
rdf/display/everytime/localeSelectionGUI.n3
rdf/display/everytime/vivoListViewConfig.rdf
rdf/display/everytime/vivoOrganizationDataGetters.n3
rdf/display/everytime/vivoSearchProhibited.n3
rdf/displayTbox/everytime/displayTBOX.n3
rdf/displayDisplay/everytime/displayDisplay.n3
rdf/applicationMetadata/firsttime/classgroups.rdf
rdf/applicationMetadata/firsttime/initialSiteConfig.rdf
rdf/applicationMetadata/firsttime/propertygroups.rdf
rdf/abox/firsttime/geopolitical.ver1.1-11-18-11-individual-labels.rdf
rdf/abox/firsttime/vocabularySource-labels.n3
rdf/abox/filegraph/abox/academicDegree.rdf
rdf/abox/filegraph/abox/continents.n3
rdf/abox/filegraph/abox/dateTimeValuePrecision.owl
rdf/abox/filegraph/abox/documentStatus.owl
rdf/abox/filegraph/abox/geopolitical.abox.ver1.1-11-18-11.owl
rdf/abox/filegraph/abox/us-states.rdf
rdf/abox/filegraph/abox/vocabularySource.n3
rdf/tbox/firsttime/geopolitical-ver1.1-11-18-11-annotations.rdf
rdf/tbox/firsttime/isDefinedBy-1.5-annotations.rdf
rdf/tbox/firsttime/scires-1.5-annotations.rdf
rdf/tbox/firsttime/vitro-0.7-annotations.rdf
rdf/tbox/firsttime/vivo-core-1.5-annotations.rdf
rdf/tbox/filegraph/tbox/geopolitical.tbox.ver1.1-11-18-11.owl
rdf/tbox/filegraph/tbox/isDefinedBy-1.5.owl
rdf/tbox/filegraph/tbox/scires-1.5.owl
rdf/tbox/filegraph/tbox/vitro-0.7.owl
rdf/tbox/filegraph/tbox/vitroPublic.owl
rdf/tbox/filegraph/tbox/vivo-bibo-1.5.owl
rdf/tbox/filegraph/tbox/vivo-c4o-1.5.owl
rdf/tbox/filegraph/tbox/vivo-core-1.5.owl
rdf/tbox/filegraph/tbox/vivo-dcelements-1.5.owl
rdf/tbox/filegraph/tbox/vivo-dcterms-1.5.owl
rdf/tbox/filegraph/tbox/vivo-event-1.5.owl
rdf/tbox/filegraph/tbox/vivo-fabio-1.5.owl
rdf/tbox/filegraph/tbox/vivo-foaf-1.5.owl
rdf/tbox/filegraph/tbox/vivo-pws-1.5.owl
rdf/tbox/filegraph/tbox/vivo-skos-1.5.owl</pre>
<p>
If you are using a three-tier build process, you will need to add two lines
to the build script to accomodate the RDF files, and the language support (see below)
@ -353,8 +332,8 @@ rdf/tbox/filegraph/tbox/vivo-skos-1.5.owl</pre>
<pre>&lt;patternset id="appbase.patterns"&gt;
&lt;include name="src/**/*" /&gt;
&lt;include name="lib/**/*" /&gt;
&lt;include name="rdf/**/*" /&gt;
&lt;include name="languages/**/*" /&gt;
<b>&lt;include name="rdf/**/*" /&gt;
&lt;include name="languages/**/*" /&gt;</b>
&lt;include name="test/**/*" /&gt;
&lt;include name="themes/**/*" /&gt;
&lt;include name="config/*.properties" /&gt;
@ -364,7 +343,9 @@ rdf/tbox/filegraph/tbox/vivo-skos-1.5.owl</pre>
&lt;include name="context.xml" /&gt;
&lt;/patternset&gt;</pre>
</p>
</li>
<li>
<h4 id="language">Support for additional languages</h4>
<p>
VIVO 1.6 includes limited support for other languages, in addition to American English.
@ -388,7 +369,9 @@ rdf/tbox/filegraph/tbox/vivo-skos-1.5.owl</pre>
<a href="https://wiki.duraspace.org/display/VIVO/Adding+a+language+to+VIVO">
Add a new language to VIVO</a>.
</p>
</li>
<li>
<h4 id="extended_lod">More compact responses to Linked data requests</h4>
<p>
In VIVO 1.6, the response to requests for linked data is changed, to be smaller and faster.
@ -429,8 +412,17 @@ rdf/tbox/filegraph/tbox/vivo-skos-1.5.owl</pre>
VIVO release 1.6 can be configured to produce extended linked data like previous releases.
However, extended linked data will not be supported in future releases.
</p>
</li>
<li>
<h4 id="google_refine">Changes to default types for Google Refine</h4>
<p>
The list of default types for Google Refine has changed, to accomodate changes in the
ontology. If you are using Google Refine, you may need to change your runtime properties
accordingly. The new defaults appear in <code>example.runtime.properties</code>.
</p>
</li>
<li>
<h4 id="browsers">Supported Browsers</h4>
<p>

13
languages/example/themes/wilma/i18n/all_es.properties
View file

@ -194,14 +194,7 @@ hyperlink = Hiperenlace
#
# accounts templates ( /templates/freemarker/body/accounts )
#
congratulations = ¡Enhorabuena!
we_have_created_your_account = Hemos creado el nuevo {0} cuenta asociada a {1}.
did_not_request_text = Si no has solicitado esta nueva cuenta puede ignorar este mensaje. Esta solicitud caducará si no se hubiere pronunciado sobre durante 30 días.
click_to_create_password = Haga clic en el enlace de abajo para crear la contraseña de su cuenta usando nuestro servidor seguro.
password = contraseña
if_link_failed = Si el enlace no funciona, puedes copiar y pegar el enlace directamente en la barra de direcciones de su navegador.
thanks = ¡Gracias!
paste_the_link = Pega el siguiente enlace en la barra de direcciones de su navegador para crear la contraseña de su cuenta usando nuestro servidor seguro.
#
# harvester templates ( /templates/freemarker/body/harvester )
@ -356,7 +349,7 @@ selected_conference = Conferencia Seleccionado
years_participation_in = Años de participación en
grant_entry_for = autorizará la entrada de
select_existing_pub_or_enter_new = Por favor seleccione una subvención actual en el campo de título o ingresar uno nuevo.
select_existing_pub_or_enter_new = Por favor seleccione una publicación actual en el campo de título o ingresar uno nuevo.
unable_to_handle_grant_editing = Esta forma no es capaz de manejar la edición de esta subvención, ya que se asocia con múltiples individuos subvención.
grant_type = concesión de la
@ -876,3 +869,7 @@ edit_year_awarded = Editar año concede
publication_date_for = fecha de publicación de
create_publication_date = Crear fecha de publicación
edit_publication_date = Editar fecha de publicación
name_prefix = Prefijo de nombre
name_suffix = Sufijo de nombre
administering_organization_for = administración de la organización para
missing_credential = falta credencial

2
productMods/WEB-INF/ontologies/update/diff.tab.txt
View file

File diff suppressed because one or more lines are too long

12
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/AdvisingRelationship.sparql → productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/AdviseeRole.sparql
View file

@ -6,18 +6,14 @@ CONSTRUCT {
?advisee <http://purl.obolibrary.org/obo/RO_0000053> _:AdviseeRole .
_:AdviseeRole <http://purl.obolibrary.org/obo/RO_0000052> ?advisee .
_:AdviseeRole a vivo:AdviseeRole .
?advisor <http://purl.obolibrary.org/obo/RO_0000053> _:AdvisorRole .
_:AdvisorRole <http://purl.obolibrary.org/obo/RO_0000052> ?advisor .
_:AdvisorRole a vivo:AdvisorRole .
_:AdviseeRole vivo:relatedBy ?advisingRelationship .
?advisingRelationship vivo:relates _:AdviseeRole .
_:AdvisorRole vivo:relatedBy ?advisingRelationship .
?advisingRelationship vivo:relates _:AdvisorRole .
?advisingRelationship vivo:relates ?advisee .
?advisingRelationship vivo:relates ?advisor .
?advisee vivo:relatedBy ?advisingRelationship .
?advisor vivo:relatedBy ?advisingRelationship .
} WHERE {
?advisee vivo:adviseeIn ?advisingRelationship .
?advisor vivo:advisorIn ?advisingRelationship .
FILTER NOT EXISTS {
?advisee <http://purl.obolibrary.org/obo/RO_0000053> ?adviseeRoleNode .
?adviseeRoleNode vivo:relatedBy ?advisingRelationship .
}
}

19
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/AdvisorRole.sparql Normal file
View file

@ -0,0 +1,19 @@
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisor <http://purl.obolibrary.org/obo/RO_0000053> _:AdvisorRole .
_:AdvisorRole <http://purl.obolibrary.org/obo/RO_0000052> ?advisor .
_:AdvisorRole a vivo:AdvisorRole .
_:AdvisorRole vivo:relatedBy ?advisingRelationship .
?advisingRelationship vivo:relates _:AdvisorRole .
?advisingRelationship vivo:relates ?advisor .
?advisor vivo:relatedBy ?advisingRelationship .
} WHERE {
?advisor vivo:advisorIn ?advisingRelationship .
FILTER NOT EXISTS {
?advisor <http://purl.obolibrary.org/obo/RO_0000053> ?advisorRoleNode .
?advisorRoleNode vivo:relatedBy ?advisingRelationship .
}
}

4
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/Editorship.sparql
View file

@ -14,5 +14,9 @@ CONSTRUCT {
} UNION {
?document vivo:editor ?person
FILTER NOT EXISTS { ?person vivo:editorOf ?document }
}
FILTER NOT EXISTS {
?person vivo:relatedBy ?editorshipNode .
?editorshipNode vivo:relates ?document .
}
}

4
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/LeaderRole.sparql
View file

@ -14,4 +14,8 @@ CONSTRUCT {
{ ?org vivo:currentlyHeadedBy ?person
FILTER NOT EXISTS { ?person vivo:currentlyHeadOf ?org }
}
FILTER NOT EXISTS {
?person <http://purl.obolibrary.org/obo/RO_0000053> ?leaderRoleNode .
?leaderRoleNode vivo:roleContributesTo ?org .
}
}

4
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/MemberRole.sparql
View file

@ -14,4 +14,8 @@ CONSTRUCT {
{ ?org vivo:hasCurrentMember ?person
FILTER NOT EXISTS { ?person vivo:currentMemberOf ?org }
}
FILTER NOT EXISTS {
?person <http://purl.obolibrary.org/obo/RO_0000053> ?memberRoleNode .
?memberRoleNode vivo:roleContributesTo ?org .
}
}

5
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/grantAdmin.sparql
View file

@ -16,4 +16,9 @@ CONSTRUCT {
{ ?grant vivo:administeredBy ?agent
FILTER NOT EXISTS { ?agent vivo:administers ?grant }
}
FILTER NOT EXISTS {
?agent <http://purl.obolibrary.org/obo/RO_0000053> ?adminRoleNode .
?adminRoleNode a vivo:AdministratorRole .
?adminRoleNode vivo:relatedBy ?grant .
}
}

3
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/post/Grant.sparql
View file

@ -7,6 +7,7 @@ CONSTRUCT {
?grant vivo:relates ?agent
} WHERE {
?agent <http://purl.obolibrary.org/obo/RO_0000053> ?role .
?role vivo:relatedBy ?grant
?role vivo:relatedBy ?grant .
?grant a vivo:Grant .
FILTER NOT EXISTS { ?grant vivo:relates ?agent }
}

4
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/post/awardedDegree.sparql
View file

@ -22,4 +22,8 @@ CONSTRUCT {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0000057> ?org .
?org a foaf:Organization
}
FILTER NOT EXISTS {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> ?awardedDegreeNode .
?person vivo:relatedBy ?awardedDegreeNode .
}
}

2
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/post/contributingAdvising.sparql
View file

@ -6,10 +6,10 @@ CONSTRUCT {
?educationalProcess <http://purl.obolibrary.org/obo/BFO_0000055> ?role .
?role <http://purl.obolibrary.org/obo/BFO_0000054> ?educationalProcess .
} WHERE {
?educationalProcess vivo:contributingAdvising ?advising .
?person <http://purl.obolibrary.org/obo/RO_0000056> ?educationalProcess .
?person a foaf:Person .
?educationalProcess a vivo:EducationalProcess .
?educationalProcess vivo:contributingAdvising ?advising .
?advising vivo:relates ?role .
?role a <http://purl.obolibrary.org/obo/BFO_0000023> .
}

24
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0.sparql
View file

@ -1,24 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s a foaf:Person
FILTER (
EXISTS { ?s foaf:firstName ?firstName } ||
EXISTS { ?s foaf:lastName ?lastName } ||
EXISTS { ?s vivo:middleName ?middleName } ||
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
}

15
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0a.sparql Normal file
View file

@ -0,0 +1,15 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s foaf:firstName ?firstName
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

15
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0b.sparql Normal file
View file

@ -0,0 +1,15 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s foaf:lastName ?lastName
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0c.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:middleName ?middleName .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0d.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:email ?email .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0e.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0f.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Person .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0g.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0h.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0i.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-0j.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Person
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

21
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1.sparql
View file

@ -1,21 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s a foaf:Organization
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1d.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:email ?email .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1e.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1f.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Organization .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1g.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1h.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1i.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-1j.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Organization
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

21
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2.sparql
View file

@ -1,21 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s a foaf:Group
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2d.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:email ?email .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2e.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:primaryEmail ?email .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2f.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s a foaf:Group .
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2g.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2h.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2i.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:mailingAddress ?address .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-2j.sparql Normal file
View file

@ -0,0 +1,16 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s vivo:webpage ?webpage .
?s a foaf:Group
FILTER NOT EXISTS {
?s arg:ARG_2000028 ?vcard .
}
}

2
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard1-3.sparql
View file

@ -7,7 +7,7 @@ PREFIX owl: <http://www.w3.org/2002/07/owl#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
_:vcard a v:Kind .
} WHERE {
?s vivo:webpage ?webpage
FILTER NOT EXISTS { ?s a foaf:Agent }

36
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2.sparql
View file

@ -1,36 +0,0 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:givenName ?firstName .
_:name vivo:middleName ?middleName .
_:name v:familyName ?lastName .
_:name v:honorificPrefix ?prefix .
_:name v:honorificSuffix ?suffix .
} WHERE {
?s arg:ARG_2000028 ?vcard .
OPTIONAL {
?s foaf:firstName ?firstName .
BIND("yes" as ?test)
}
OPTIONAL {
?s foaf:lastName ?lastName .
BIND("yes" as ?test)
}
OPTIONAL {
?s vivo:middleName ?middleName
BIND("yes" as ?test)
}
OPTIONAL {
?s bibo:prefixName ?prefix
}
OPTIONAL {
?s bibo:suffixName ?suffix
}
FILTER(bound(?test))
}

5
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard22.sparql
View file

@ -9,6 +9,9 @@ CONSTRUCT {
_:title a v:Title .
_:title v:title ?preferredTitle .
} WHERE {
?s arg:ARG_2000028 ?vcard .
?s <http://vivoweb.org/ontology/core#preferredTitle> ?preferredTitle .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasTitle ?title
}
}

17
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2a.sparql Normal file
View file

@ -0,0 +1,17 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:givenName ?firstName .
} WHERE {
?s foaf:firstName ?firstName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2b.sparql Normal file
View file

@ -0,0 +1,13 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:givenName ?firstName .
} WHERE {
?s foaf:firstName ?firstName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2c.sparql Normal file
View file

@ -0,0 +1,17 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name vivo:middleName ?middleName .
} WHERE {
?s vivo:middleName ?middleName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

14
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2d.sparql Normal file
View file

@ -0,0 +1,14 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name vivo:middleName ?middleName .
} WHERE {
?s vivo:middleName ?middleName .
?s a foaf:Person .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2e.sparql Normal file
View file

@ -0,0 +1,17 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:familyName ?lastName .
} WHERE {
?s foaf:lastName ?lastName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2f.sparql Normal file
View file

@ -0,0 +1,13 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:familyName ?lastName .
} WHERE {
?s foaf:lastName ?lastName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2g.sparql Normal file
View file

@ -0,0 +1,17 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:honorificPrefix ?prefixName .
} WHERE {
?s bibo:prefixName ?prefixName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2h.sparql Normal file
View file

@ -0,0 +1,13 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:honorificPrefix ?prefixName .
} WHERE {
?s bibo:prefixName ?prefixName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2i.sparql Normal file
View file

@ -0,0 +1,17 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:honorificSuffix ?suffixName .
} WHERE {
?s bibo:suffixName ?suffixName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard2j.sparql Normal file
View file

@ -0,0 +1,13 @@
PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:honorificSuffix ?suffixName .
} WHERE {
?s bibo:suffixName ?suffixName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

5
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard3.sparql
View file

@ -8,6 +8,9 @@ CONSTRUCT {
_:email a v:Email .
_:email v:email ?email .
} WHERE {
?s vivo:email ?email .
?s arg:ARG_2000028 ?vcard .
?s vivo:email ?email
FILTER NOT EXISTS {
?vcard v:hasEmail ?emailnode
}
}

6
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard4.sparql
View file

@ -9,6 +9,10 @@ CONSTRUCT {
_:primaryEmail a v:Work .
_:primaryEmail v:email ?primaryEmail .
} WHERE {
?s vivo:primaryEmail ?primaryEmail .
?s arg:ARG_2000028 ?vcard .
?s vivo:primaryEmail ?primaryEmail
FILTER NOT EXISTS {
?vcard v:hasEmail ?email .
?email a v:Work .
}
}

5
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard5.sparql
View file

@ -9,6 +9,9 @@ CONSTRUCT {
_:telephone a v:Voice .
_:telephone v:telephone ?phoneNumber .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s arg:ARG_2000028 ?vcard .
?s vivo:phoneNumber ?phoneNumber
FILTER NOT EXISTS {
?vcard v:hasTelephone ?telephoneNode .
}
}

6
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard6.sparql
View file

@ -10,6 +10,10 @@ CONSTRUCT {
_:primaryTelephone a v:Work .
_:primaryTelephone v:telephone ?primaryPhoneNumber .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s arg:ARG_2000028 ?vcard .
?s vivo:primaryPhoneNumber ?primaryPhoneNumber
FILTER NOT EXISTS {
?vcard v:hasTelephone ?telephoneNode .
?vcard a v:Work .
}
}

6
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard7.sparql
View file

@ -9,6 +9,10 @@ CONSTRUCT {
_:fax a v:Fax.
_:fax v:telephone ?faxNumber .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s arg:ARG_2000028 ?vcard .
?s vivo:faxNumber ?faxNumber
FILTER NOT EXISTS {
?vcard v:hasTelephone ?faxNode .
?faxNode a v:Fax .
}
}

16
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard8.sparql
View file

@ -11,13 +11,16 @@ CONSTRUCT {
_:address v:region ?addressState .
_:address v:postalCode ?addressPostalCode .
_:address v:country ?addressCountry .
_:address <http://purl.obolibrary.org/obo/RO_0001025> ?location .
?location <http://purl.obolibrary.org/obo/RO_0001015> _:address .
} WHERE {
?s arg:ARG_2000028 ?vcard .
?s vivo:mailingAddress ?address .
?address vivo:addressCity ?addressCity .
?address vivo:addressState ?addressState .
?address vivo:addressCountry ?addressCountry .
?address vivo:addressPostalCode ?addressPostalCode .
OPTIONAL { ?address vivo:addressCity ?addressCity }
OPTIONAL { ?address vivo:addressState ?addressState }
OPTIONAL { ?address vivo:addressPostalCode ?addressPostalCode }
OPTIONAL { ?address vivo:addressCountry ?addressCountry }
OPTIONAL { ?address vivo:hasGeographicLocation ?location }
?s arg:ARG_2000028 ?vcard .
OPTIONAL {
?address vivo:address1 ?address1 .
?address vivo:address2 ?address2 .
@ -33,5 +36,8 @@ CONSTRUCT {
OPTIONAL {
?address vivo:address1 ?address1
BIND(?address1 as ?streetAddress)
}
FILTER NOT EXISTS {
?vcard v:hasAddress ?addressNode
}
}

5
productMods/WEB-INF/ontologies/update/sparqlConstructs/additions/vcard9.sparql
View file

@ -10,10 +10,13 @@ CONSTRUCT {
_:url v:url ?linkURI .
_:url rdfs:label ?linkAnchorText
} WHERE {
?s arg:ARG_2000028 ?vcard .
?s vivo:webpage ?webpage .
?webpage vivo:linkURI ?linkURI .
?s arg:ARG_2000028 ?vcard .
OPTIONAL {
?webpage vivo:linkAnchorText ?linkAnchorText
}
FILTER NOT EXISTS {
?vcard v:hasURL ?URLNode
}
}

6
productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/AdvisingRelationshipDel.sparql
View file

@ -3,15 +3,9 @@ PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisee vivo:adviseeIn ?advisingRelationship .
?advisingRelationship vivo:advisee ?advisee .
?advisor vivo:advisorIn ?advisingRelationship .
?advisingRelationship vivo:advisor ?advisor
} WHERE {
?advisee vivo:adviseeIn ?advisingRelationship .
OPTIONAL {
?advisingRelationship vivo:advisee ?advisee .
}
?advisor vivo:advisorIn ?advisingRelationship .
OPTIONAL {
?advisingRelationship vivo:advisor ?advisor

13
productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/AdvisingRelationshipDel2.sparql Normal file
View file

@ -0,0 +1,13 @@
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisee vivo:adviseeIn ?advisingRelationship .
?advisingRelationship vivo:advisee ?advisee .
} WHERE {
?advisee vivo:adviseeIn ?advisingRelationship .
OPTIONAL {
?advisingRelationship vivo:advisee ?advisee .
}
}

8
productMods/WEB-INF/ontologies/update/sparqlConstructs/deletions/vcardDel.sparql
View file

@ -17,6 +17,7 @@ CONSTRUCT {
?s vivo:faxNumber ?faxNumber .
?s vivo:mailingAddress ?address .
?address ?addressP ?addressO .
?addressS ?addressQ ?address .
?s vivo:webpage ?webpage .
?webpage ?webpageP ?webpageO .
} WHERE {
@ -27,7 +28,8 @@ CONSTRUCT {
?s foaf:lastName ?lastName .
}
UNION {
?s vivo:middleName ?middleName
?s vivo:middleName ?middleName .
?s a foaf:Person .
}
UNION {
?s bibo:prefixName ?prefix
@ -57,6 +59,10 @@ CONSTRUCT {
?s vivo:mailingAddress ?address .
?address ?addressP ?addressO
}
UNION {
?s vivo:mailingAddress ?address .
?addressS ?addressQ ?address
}
UNION {
?s vivo:webpage ?webpage
}

5
productMods/WEB-INF/resources/startup_listeners.txt
View file

@ -34,12 +34,11 @@ edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdatePermissionSetUris
edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup
edu.cornell.mannlib.vitro.webapp.servlet.setup.SimpleReasonerSetup
# Invokes process to perform updates to align with ontology changes if needed -->
# Needs to run before submodels are attached and Pellet is set up -->
edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdateKnowledgeBase
edu.cornell.mannlib.vitro.webapp.servlet.setup.SimpleReasonerSetup
# Must run after JenaDataSourceSetup
edu.cornell.mannlib.vitro.webapp.servlet.setup.ThemeInfoSetup

6
productMods/WEB-INF/rich-export/address/address.sparql
View file

@ -1,8 +1,12 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
CONSTRUCT {
?address ?property ?object .
} WHERE {
PERSON_URI core:mailingAddress ?address .
PERSON_URI obo:ARG_2000028 ?vcard .
?vcard vcard:hasAddress ?address .
?address ?property ?object .
}

7
productMods/WEB-INF/rich-export/address/locationOfAddress.sparql
View file

@ -1,9 +1,12 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
CONSTRUCT {
?geographicLocation ?property ?object .
} WHERE {
PERSON_URI core:mailingAddress ?address .
?address core:hasGeographicLocation ?geographicLocation .
PERSON_URI obo:ARG_2000028 ?vcard .
?vcard vcard:hasAddress ?address .
?address obo:RO_0001025 ?geographicLocation .
?geographicLocation ?property ?object .
}

15
productMods/WEB-INF/rich-export/advising/advisee.sparql
View file

@ -1,9 +1,16 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person ?property ?object .
?advisee ?property ?object .
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
?advisingRelationship core:advisee ?person .
?person ?property ?object .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee ?property ?object .
}

18
productMods/WEB-INF/rich-export/advising/adviseesDegreeAlt.sparql
View file

@ -1,11 +1,21 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?degree ?property ?object
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
?advisingRelationship core:advisee ?advisee .
?advisee core:educationalTraining ?educationalTraining .
?educationalTraining core:degreeEarned ?degree .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0002234 ?awardedDegree .
?awardedDegree core:relates ?degree .
?degree a core:AcademicDegree .
?degree ?property ?object
}

14
productMods/WEB-INF/rich-export/advising/adviseesEducationEndDate.sparql
View file

@ -1,11 +1,19 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?dateTimeValue ?property ?object .
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
?advisingRelationship core:advisee ?advisee .
?advisee core:educationalTraining ?educationalTraining .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining core:dateTimeInterval ?dateTimeInterval .
?dateTimeInterval core:end ?dateTimeValue .
?dateTimeValue ?property ?object .

17
productMods/WEB-INF/rich-export/advising/adviseesEducationalInsitituionAlt.sparql
View file

@ -1,12 +1,21 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
CONSTRUCT {
?educationalInstitution rdfs:label ?label
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
?advisingRelationship core:advisee ?advisee .
?advisee core:educationalTraining ?educationalTraining .
?educationalTraining core:trainingAtOrganization ?educationalInstitution .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0000057 ?educationalInstitution .
?educationalInstitution a foaf:Organization .
?educationalInstitution rdfs:label ?label
}

4
productMods/WEB-INF/rich-export/advising/associatedDegree.sparql
View file

@ -1,9 +1,11 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?degree ?property ?object .
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:degreeCandidacy ?degree .
?degree ?property ?object .
}

3
productMods/WEB-INF/rich-export/advising/associatedEducationalTraining.sparql
View file

@ -3,7 +3,8 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?educationalTraining ?property ?object .
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:advisingContributionTo ?educationalTraining .
?educationalTraining ?property ?object .
}

14
productMods/WEB-INF/rich-export/advising/associatedEducationalTrainingAlt.sparql
View file

@ -1,10 +1,18 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?educationalTraining ?property ?object .
} WHERE {
PERSON_URI core:advisorIn ?advisingRelationship .
?advisingRelationship core:advisee ?advisee .
?advisee core:educationalTraining ?educationalTraining .
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining ?property ?object .
}

6
productMods/WEB-INF/rich-export/award/award.sparql
View file

@ -3,7 +3,9 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?award ?property ?object .
} WHERE {
PERSON_URI core:awardOrHonor ?awardReceipt .
?awardReceipt core:receiptOf ?award .
PERSON_URI core:relatedBy ?awardReceipt .
?awardReceipt a core:AwardReceipt .
?awardReceipt core:relates ?award .
?award a core:Award .
?award ?property ?object .
}

7
productMods/WEB-INF/rich-export/award/conferringOrganization.sparql
View file

@ -1,9 +1,12 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?organization ?property ?object .
} WHERE {
PERSON_URI core:awardOrHonor ?awardReceipt .
?awardReceipt core:awardConferredBy ?organization .
PERSON_URI core:relatedBy ?awardReceipt .
?awardReceipt a core:AwardReceipt .
?awardReceipt core:assignedBy ?organization .
?organization a foaf:Organization .
?organization ?property ?object .
}

7
productMods/WEB-INF/rich-export/award/sponsoringOrganization.sparql
View file

@ -1,10 +1,13 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?organization ?property ?object .
} WHERE {
PERSON_URI core:awardOrHonor ?awardReceipt .
?awardReceipt core:receiptOf ?award .
PERSON_URI core:relatedBy ?awardReceipt .
?awardReceipt a core:AwardReceipt .
?awardReceipt core:relates ?award .
?award a core:Award .
?award core:sponsoredBy ?organization .
?organization ?property ?object .
}

6
productMods/WEB-INF/rich-export/credential/credential.sparql
View file

@ -3,7 +3,9 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?credential ?property ?object .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
?issuedCredential core:issuanceOfCredential ?credential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential core:relates ?credential .
?credential a core:Credential .
?credential ?property ?object .
}

6
productMods/WEB-INF/rich-export/credential/credentialGoverningAuthority.sparql
View file

@ -3,8 +3,10 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?organization ?property ?object .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
?issuedCredential core:issuanceOfCredential ?credential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential core:relates ?credential .
?credential a core:Credential .
?credential core:hasGoverningAuthority ?organization .
?organization ?property ?object .
}

3
productMods/WEB-INF/rich-export/credential/issuedCredential.sparql
View file

@ -3,6 +3,7 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?issuedCredential ?property ?object .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential ?property ?object .
}

3
productMods/WEB-INF/rich-export/credential/issuedCredentialExpirationDate.sparql
View file

@ -4,7 +4,8 @@ CONSTRUCT {
?date ?property ?object .
?precision ?property2 ?object2 .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential core:expirationDate ?date .
?date ?property ?object .
?date core:dateTimePrecision ?precision .

3
productMods/WEB-INF/rich-export/credential/issuedCredentialIssueDate.sparql
View file

@ -4,7 +4,8 @@ CONSTRUCT {
?date ?property ?object .
?precision ?property2 ?object2 .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential core:dateIssued ?date .
?date ?property ?object .
?date core:dateTimePrecision ?precision .

3
productMods/WEB-INF/rich-export/credential/issuedCredentialSubjectArea.sparql
View file

@ -3,7 +3,8 @@ PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?subjectArea ?property ?object .
} WHERE {
PERSON_URI core:hasCredential ?issuedCredential .
PERSON_URI core:relatedBy ?issuedCredential .
?issuedCredential a core:IssuedCredential .
?issuedCredential core:hasSubjectArea ?subjectArea .
?subjectArea ?property ?object .
}

4
productMods/WEB-INF/rich-export/educationalTraining/educationalTraining.sparql
View file

@ -1,8 +1,10 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?educationalTraining ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining ?property ?object .
}

9
productMods/WEB-INF/rich-export/educationalTraining/educationalTrainingDegree.sparql
View file

@ -1,9 +1,14 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?degree ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
?educationalTraining core:degreeEarned ?degree .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0002234 ?awardedDegree .
?awardedDegree a core:AwardedDegree .
?awardedDegree core:relates ?degree .
?degree a core:AcademicDegree .
?degree ?property ?object .
}

4
productMods/WEB-INF/rich-export/educationalTraining/educationalTrainingEndDate.sparql
View file

@ -1,10 +1,12 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?dateTimeInterval core:end ?date .
?date ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining core:dateTimeInterval ?dateTimeInterval .
?dateTimeInterval core:end ?date .
?date ?property ?object .

11
productMods/WEB-INF/rich-export/educationalTraining/educationalTrainingLocation.sparql
View file

@ -1,10 +1,15 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?geographicLocation ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
?educationalTraining core:trainingAtOrganization ?organization .
?organization core:hasGeographicLocation ?geographicLocation .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0000057 ?organization .
?organization a foaf:Organization .
?organization obo:RO_0001025 ?geographicLocation .
?geographicLocation a core:GeographicLocation .
?geographicLocation ?property ?object .
}

8
productMods/WEB-INF/rich-export/educationalTraining/educationalTrainingOrganization.sparql
View file

@ -1,9 +1,13 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?organization ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
?educationalTraining core:trainingAtOrganization ?organization .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0000057 ?organization .
?organization a foaf:Organization .
?organization ?property ?object .
}

4
productMods/WEB-INF/rich-export/educationalTraining/educationalTrainingStartDate.sparql
View file

@ -1,9 +1,11 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?date ?property ?object .
} WHERE {
PERSON_URI core:educationalTraining ?educationalTraining .
PERSON_URI obo:RO_0000056 ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining core:dateTimeInterval ?dateTimeInterval .
?dateTimeInterval core:start ?date .
?date ?property ?object .

17
productMods/WEB-INF/rich-export/funding/grantAwardedBy.sparql
View file

@ -1,20 +1,23 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
CONSTRUCT {
?investigatorRole core:roleContributesTo ?grant .
?grant core:grantAwardedBy ?awardingOrganization .
?awardingOrganization rdfs:label ?label
} WHERE {
{
{PERSON_URI core:hasPrincipalInvestigatorRole ?investigatorRole }
{PERSON_URI core:relatedBy ?investigatorRole .
?investigatorRole a core:PrincipalInvestigatorRole
}
union
{PERSON_URI core:hasCo-PrincipalInvestigatorRole ?investigatorRole }
{PERSON_URI core:relatedBy ?investigatorRole .
?investigatorRole a core:CoPrincipalInvestigatorRole
}
}
?investigatorRole core:roleContributesTo ?grant .
?investigatorRole core:relatedBy ?grant .
?grant a core:Grant .
?grant core:grantAwardedBy ?awardingOrganization .
?grant core:assignedBy ?awardingOrganization .
?awardingOrganization a foaf:Organization .
?awardingOrganization rdfs:label ?label
}

16
productMods/WEB-INF/rich-export/funding/grants.sparql
View file

@ -3,15 +3,19 @@ PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
CONSTRUCT {
?grant ?property ?object .
?investigatorRole core:roleContributesTo ?grant .
?investigatorRole core:relatedBy ?grant .
} WHERE {
{
{PERSON_URI core:hasPrincipalInvestigatorRole ?investigatorRole }
union
{PERSON_URI core:hasCo-PrincipalInvestigatorRole ?investigatorRole }
{
{ PERSON_URI core:relatedBy ?investigatorRole .
?investigatorRole a core:PrincipalInvestigatorRole
}
union
{ PERSON_URI core:relatedBy ?investigatorRole .
?investigatorRole a core:CoPrincipalInvestigatorRole
}
}
?investigatorRole core:roleContributesTo ?grant .
?investigatorRole core:relatedBy ?grant .
?grant a core:Grant .
?grant ?property ?object
}

12
productMods/WEB-INF/rich-export/membership/memberRoleIn.sparql
View file

@ -1,15 +1,11 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?endeavor ?property ?object .
} WHERE {
PERSON_URI core:hasMemberRole ?memberRole .
{
{?memberRole core:roleRealizedIn ?endeavor }
union
{?memberRole core:roleContributesTo ?endeavor }
}
PERSON_URI obo:RO_0000053 ?memberRole .
?memberRole a core:MemberRole .
?memberRole core:roleContributesTo ?endeavor .
?endeavor ?property ?object .
}

12
productMods/WEB-INF/rich-export/outreach/outreachRoleIn.sparql
View file

@ -1,15 +1,11 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?endeavor ?property ?object .
} WHERE {
PERSON_URI core:hasOutreachProviderRole ?outreachRole .
{
{ ?memberRole core:roleRealizedIn ?endeavor }
union
{ ?memberRole core:roleContributesTo ?endeavor }
}
PERSON_URI obo:RO_0000053 ?outreachRole .
?outreachRole a core:OutreachProviderRole .
?outreachRole core:roleContributesTo ?endeavor .
?endeavor ?property ?object .
}

5
productMods/WEB-INF/rich-export/patent/assignee.sparql
View file

@ -5,8 +5,9 @@ PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?assignee ?property ?object .
} WHERE {
PERSON_URI core:authorInAuthorship ?authorship .
?authorship core:linkedInformationResource ?patent .
PERSON_URI core:relatedBy ?authorship .
?authorship a core:Authorship .
?authorship core:relates ?patent .
?patent rdf:type bibo:Patent .
?patent core:assignee ?assignee .
?assignee ?property ?object .

9
productMods/WEB-INF/rich-export/patent/inventors.sparql
View file

@ -1,13 +1,16 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person ?property ?object .
} WHERE {
PERSON_URI core:authorInAuthorship ?authorship .
?authorship core:linkedInformationResource ?patent .
PERSON_URI core:relatedBy ?authorship .
?authorship a core:Authorship .
?authorship core:relates ?patent .
?patent rdf:type bibo:Patent .
?authorship core:linkedAuthor ?person .
?authorship core:relates ?person .
?person a foaf:Person .
?person ?property ?object .
}

5
productMods/WEB-INF/rich-export/patent/patent.sparql
View file

@ -5,8 +5,9 @@ PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?patent ?property ?object .
} WHERE {
PERSON_URI core:authorInAuthorship ?authorship .
?authorship core:linkedInformationResource ?patent .
PERSON_URI core:relatedBy ?authorship .
?authorship a core:Authorship .
?authorship core:relates ?patent .
?patent rdf:type bibo:Patent .
?patent ?property ?object .
}

5
productMods/WEB-INF/rich-export/patent/patentFiledDate.sparql
View file

@ -6,8 +6,9 @@ CONSTRUCT {
?date ?property ?object .
?precision ?property2 ?object2 .
} WHERE {
PERSON_URI core:authorInAuthorship ?authorship .
?authorship core:linkedInformationResource ?patent .
PERSON_URI core:relatedBy ?authorship .
?authorship a core:Authorship .
?authorship core:relates ?patent .
?patent rdf:type bibo:Patent .
?patent core:dateFiled ?date .
?date ?property ?object .

5
productMods/WEB-INF/rich-export/patent/patentIssuedDate.sparql
View file

@ -6,8 +6,9 @@ CONSTRUCT {
?date ?property ?object .
?precision ?property2 ?object2 .
} WHERE {
PERSON_URI core:authorInAuthorship ?authorship .
?authorship core:linkedInformationResource ?patent .
PERSON_URI core:relatedBy ?authorship .
?authorship a core:Authorship .
?authorship core:relates ?patent .
?patent rdf:type bibo:Patent .
?patent core:dateIssued ?date .
?date ?property ?object .

10
productMods/WEB-INF/rich-export/position/locationForPosition.sparql
View file

@ -1,12 +1,16 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?organization core:hasGeographicLocation ?geographicLocation .
?geographicLocation rdfs:label ?label .
} WHERE {
PERSON_URI core:personInPosition ?position .
?position core:positionInOrganization ?organization .
?organization core:hasGeographicLocation ?geographicLocation .
PERSON_URI core:relatedBy ?position .
?position a core:Position .
?position core:relates ?organization .
?organization a foaf:Organization .
?organization obo:RO_0001025 ?geographicLocation .
?geographicLocation rdfs:label ?label .
}

Some files were not shown because too many files have changed in this diff Show more