From f585d90c0ecac0b2f633b024e05774ead54ce570 Mon Sep 17 00:00:00 2001 From: diatomsRcool Date: Wed, 23 Sep 2020 11:03:25 -0400 Subject: [PATCH] adding collections process terms (#165) * adding collections process terms No JIRA :( --- .../resources/rdf/tbox/filegraph/vivo.owl | 70 +++++++++++++++++++ 1 file changed, 70 insertions(+) diff --git a/home/src/main/resources/rdf/tbox/filegraph/vivo.owl b/home/src/main/resources/rdf/tbox/filegraph/vivo.owl index 205cb2e6..1dd529cb 100644 --- a/home/src/main/resources/rdf/tbox/filegraph/vivo.owl +++ b/home/src/main/resources/rdf/tbox/filegraph/vivo.owl @@ -5982,6 +5982,32 @@ To enable other Gender/Sex codes to be used, this dataproperty has range URI. Th + + + + Data Collection Process + + Observing and recording the presence or absence of butterflies during a transect walk.; A trip camera capture of an image of a jaguar is an observation, because it is "selected" by the camera as worthy of obsevation simply by virtue of moving in front of the camera.; Seeing three pelicans flying overhead on Christmas day and report them as part of the Christmas Bird Count. + + A process in which a person or machine sees or detects a material entity and selects it as worthy of observation, and which has as output an information content entity about the selected material entity. + Under development + A collection process in which an information content entity is collected for research or scholarly purposes. The immediate use case is recording observations of taxa (presence/absence). Need to figure out how this relates to OBI assay OBI:0000070. maybe has broader synonym OBI:0000070 + + + + + + + + Taxonomic Identification Process + + Using a key to identify a plant in the field.; Using DNA barcoding to identify a plant species.; Associating a museum specimen with a specific taxonomic concept based on its characters.; Using BLAST to identify the taxa present in an environmental (metagenomic) sample. + + A curation process in which a taxonomic name is appied to a biological entity to denote membership in a taxon. + + + + @@ -9754,6 +9780,20 @@ This class allows for linking an author to a publication while indicating inform + + + + + Georeferenced + + A curation process in which a material entity is annotated with geo-coordinates to indicate the location of a collection + Under development + PERSON: Anne Thessen + Georeferencing Process + + + + @@ -9846,6 +9886,21 @@ This class allows for linking an author to a publication while indicating inform + + + + + Identified + + A curation process in which a term is appied to a material entity to denote its type or kind + Under development + PERSON: Anne Thessen + This is intended to apply to a wide variety of material entities, not just biological specimens. + Identification Process + + + + @@ -10028,6 +10083,21 @@ This class allows for linking an author to a publication while indicating inform + + + + + Measured + + A curation process in which data are collected about a specimen in a collection + Under development + PERSON: Anne Thessen + possibly has broader synonym OBI assay OBI:0000070 because all measurement processes will be assays, but not all assays will be performed on a material entity in a collection + Measurement Process + + + +