From f7e2663a019a3b54f4140af7cc80f4ea89864716 Mon Sep 17 00:00:00 2001 From: brianjlowe Date: Mon, 30 Sep 2013 16:02:41 -0400 Subject: [PATCH] annotation property changes and VIVO-310 adding missing inverse property axiom --- rdf/tbox/filegraph/classes-additional.owl | 12 ++++++------ rdf/tbox/filegraph/object-properties.owl | 1 + rdf/tbox/filegraph/object-properties3.owl | 1 - rdf/tbox/filegraph/personTypes.n3 | 16 ++++++++-------- rdf/tbox/filegraph/publication.owl | 7 +++---- rdf/tbox/filegraph/research.owl | 11 +++++------ 6 files changed, 23 insertions(+), 25 deletions(-) diff --git a/rdf/tbox/filegraph/classes-additional.owl b/rdf/tbox/filegraph/classes-additional.owl index a3830b85..b5388cad 100644 --- a/rdf/tbox/filegraph/classes-additional.owl +++ b/rdf/tbox/filegraph/classes-additional.owl @@ -803,8 +803,8 @@ - Currently any abstract name is given to individuals of this class. This could change in the future. - Represents educational training that has been received. + Currently any abstract name is given to individuals of this class. This could change in the future. + Represents educational training that has been received. This connects person to their academic degree through this educational training, but can also be used when the training does not result in a degree. @@ -913,7 +913,7 @@ - The most general classification of an information resource + The most general classification of an information resource @@ -1042,8 +1042,8 @@ - A person's, group's or organization's role in an endeavor - Only use if no specific subclasses of core:Role describe the role. + A person's, group's or organization's role in an endeavor + Only use if no specific subclasses of core:Role describe the role. Only use this broad role class if no subclasses of role describe the item being classified. @@ -1061,7 +1061,7 @@ - Computer program and its related documentation; directs the operation of a computer + Computer program and its related documentation; directs the operation of a computer diff --git a/rdf/tbox/filegraph/object-properties.owl b/rdf/tbox/filegraph/object-properties.owl index 9e16e277..5ffaa386 100644 --- a/rdf/tbox/filegraph/object-properties.owl +++ b/rdf/tbox/filegraph/object-properties.owl @@ -1532,6 +1532,7 @@ there is a measurement process p that has specified output m, a measurement datu geographic focus of + diff --git a/rdf/tbox/filegraph/object-properties3.owl b/rdf/tbox/filegraph/object-properties3.owl index 700f8794..d0870a7d 100644 --- a/rdf/tbox/filegraph/object-properties3.owl +++ b/rdf/tbox/filegraph/object-properties3.owl @@ -33,7 +33,6 @@ - diff --git a/rdf/tbox/filegraph/personTypes.n3 b/rdf/tbox/filegraph/personTypes.n3 index 42c233d7..e07a95fe 100644 --- a/rdf/tbox/filegraph/personTypes.n3 +++ b/rdf/tbox/filegraph/personTypes.n3 @@ -52,46 +52,46 @@ core:FacultyMember rdfs:subClassOf foaf:Person , ; vitro:descriptionAnnot "Definition from here: http://research.carleton.ca/htr/defs.php."^^xsd:string ; - vitro:shortDef "A person with at least one academic appointment to a specific faculty of a university or institution of higher learning."^^xsd:string . + obo:IAO_0000115 "A person with at least one academic appointment to a specific faculty of a university or institution of higher learning."^^xsd:string . core:Postdoc a owl:Class ; rdfs:label "Postdoc"@en-us ; rdfs:subClassOf , core:NonFacultyAcademic ; - vitro:shortDef "A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term)"^^xsd:string . + obo:IAO_0000115 "A Person holding an academic employment appointment focused on research rather than teaching; temporary (or for some defined term)"^^xsd:string . core:NonFacultyAcademic a owl:Class ; rdfs:label "Non-Faculty Academic"@en-us ; rdfs:subClassOf foaf:Person , ; - vitro:shortDef "A person not considered a faculty member but holding an academic appointment."^^xsd:string . + obo:IAO_0000115 "A person not considered a faculty member but holding an academic appointment."^^xsd:string . core:EmeritusLibrarian a owl:Class ; rdfs:label "Librarian Emeritus"@en-us ; rdfs:subClassOf foaf:Person , ; - vitro:shortDef "A retired librarian who has retained their rank, title and privileges."^^xsd:string . + obo:IAO_0000115 "A retired librarian who has retained their rank, title and privileges."^^xsd:string . core:EmeritusFaculty a owl:Class ; rdfs:label "Faculty Member Emeritus"@en-us ; rdfs:subClassOf foaf:Person , ; - vitro:shortDef "A retired faculty member who has retained their rank, title and privileges."^^xsd:string . + obo:IAO_0000115 "A retired faculty member who has retained their rank, title and privileges."^^xsd:string . core:Librarian a owl:Class ; rdfs:label "Librarian"@en-us ; rdfs:subClassOf foaf:Person , ; - vitro:shortDef "A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials."^^xsd:string . + obo:IAO_0000115 "A person working in a position of librarian or information professional, or academic or technical expert in support of providing information services or materials."^^xsd:string . core:EmeritusProfessor a owl:Class ; rdfs:label "Professor Emeritus"@en-us ; rdfs:subClassOf core:EmeritusFaculty , foaf:Person , ; - vitro:shortDef "A retired professor who has retained their rank, title and privileges."^^xsd:string . + obo:IAO_0000115 "A retired professor who has retained their rank, title and privileges."^^xsd:string . core:NonAcademic a owl:Class ; rdfs:label "Non-Academic"@en-us ; rdfs:subClassOf foaf:Person , ; - vitro:shortDef "A person holding a position that is not considered to be an academic appointment."^^xsd:string . + obo:IAO_0000115 "A person holding a position that is not considered to be an academic appointment."^^xsd:string . diff --git a/rdf/tbox/filegraph/publication.owl b/rdf/tbox/filegraph/publication.owl index df440caf..48fe902e 100644 --- a/rdf/tbox/filegraph/publication.owl +++ b/rdf/tbox/filegraph/publication.owl @@ -27,7 +27,6 @@ - @@ -864,7 +863,7 @@ clinical guideline - A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. + A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work. @@ -875,7 +874,7 @@ comment - A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by + A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program. has super-classes @@ -888,7 +887,7 @@ has super-classes erratum - A formal correction to an error introduced by the publisher into a previously published document. + A formal correction to an error introduced by the publisher into a previously published document. A formal correction to an error introduced by the publisher into a previously published document. diff --git a/rdf/tbox/filegraph/research.owl b/rdf/tbox/filegraph/research.owl index 104e0be3..3d70f4b3 100644 --- a/rdf/tbox/filegraph/research.owl +++ b/rdf/tbox/filegraph/research.owl @@ -25,7 +25,6 @@ - @@ -93,7 +92,7 @@ phase 0 clinical trial - Phase 0 Clinical Trial + Phase 0 Clinical Trial Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies. @@ -105,7 +104,7 @@ phase 1 clinical trial In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects - Phase 1 Clinical Trial + Phase 1 Clinical Trial @@ -116,7 +115,7 @@ phase 2 clinical trial In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety. - Phase 2 Clinical Trial + Phase 2 Clinical Trial @@ -128,7 +127,7 @@ In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely. - Phase 3 Clinical Trial + Phase 3 Clinical Trial @@ -139,7 +138,7 @@ phase 4 clinical trial In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use. - Phase 4 Clinical Trial + Phase 4 Clinical Trial