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Maven migration (first draft)

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Graham Triggs 2015-11-19 23:47:41 +00:00
parent da79ac3e1d
commit fee48b0b50
1711 changed files with 662 additions and 0 deletions
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webapp/pom.xml Normal file
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<project
xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>org.vivoweb</groupId>
<artifactId>vivo-webapp</artifactId>
<version>1.9.0-SNAPSHOT</version>
<packaging>war</packaging>
<parent>
<groupId>org.vivoweb</groupId>
<artifactId>vivo-project</artifactId>
<version>1.9.0-SNAPSHOT</version>
<relativePath>..</relativePath>
</parent>
<name>VIVO Web App</name>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<version>2.6</version>
<configuration>
<archive>
<manifest>
<addClasspath>true</addClasspath>
</manifest>
</archive>
<archiveClasses>false</archiveClasses>
<overlays>
<overlay>
<groupId>org.vivoweb</groupId>
<artifactId>vitro-webapp</artifactId>
<type>war</type>
</overlay>
</overlays>
</configuration>
<executions>
<execution>
<phase>prepare-package</phase>
</execution>
</executions>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>org.vivoweb</groupId>
<artifactId>vitro-webapp</artifactId>
<type>war</type>
</dependency>
<dependency>
<groupId>org.vivoweb</groupId>
<artifactId>vivo-api</artifactId>
<version>1.9.0-SNAPSHOT</version>
</dependency>
</dependencies>
</project>

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webapp/src/main/webResources/WEB-INF/resources/build.properties Normal file
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# -----------------------------------------------------------------------------
#
# VIVO build properties
#
# This file is provided as example.build.properties.
#
# Save a copy of this file as build.properties, and edit the properties as
# needed for your deployment.
#
# -----------------------------------------------------------------------------
#
# The base install directory for your Tomcat server. The VIVO application
# will be deployed in the /webapps directory below this base.
#
tomcat.home = ${tomcat.home}
#
# The location where the VIVO application will store the data that it creates.
# This includes uploaded files (usually images) and the search index.
#
vitro.home = ${vitro.home}

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webapp/src/main/webapp/WEB-INF/ontologies/update15to16/askUpdated.sparql Normal file
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PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
ASK {
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology ?u .
?u vitro:toOntologyVersion "1.6" .
}

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webapp/src/main/webapp/WEB-INF/ontologies/update15to16/diff.tab.txt Normal file
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562
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/oldAnnotations/geopolitical-ver1.1-11-18-11-annotations.rdf Normal file
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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:j.0="http://www.w3.org/2006/12/owl2-xml#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:j.1="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:j.2="http://www.w3.org/2008/05/skos#"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:j.3="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#hasCoordinate">
<rdfs:label xml:lang="en-US">hasCoordinate</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameShortFR">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nameShortFR</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#disputed">
<rdfs:label xml:lang="en-US">disputed</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#area">
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<rdfs:label xml:lang="en-US">area</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaNotes">
<rdfs:label xml:lang="en-US">agriculturalAreaNotes</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameListZH">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nameListZH</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameListES">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nameListES</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#codeFAOTERM">
<rdfs:label xml:lang="en-US">codeFAOTERM</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameListAR">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nameListAR</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#populationYear">
<rdfs:label xml:lang="en-US">populationYear</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#codeCurrency">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">codeCurrency</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nationalityES">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nationalityES</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameOfficialRU">
<rdfs:label xml:lang="en-US">nameOfficialRU</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#economic_region">
<rdfs:label xml:lang="en-US">economic_region</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#codeUNDP">
<rdfs:label xml:lang="en-US">codeUNDP</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#non_self_governing">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<rdfs:label xml:lang="en-US">non_self_governing</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameShortES">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nameShortES</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#isPredecessorOf">
<rdfs:label xml:lang="en-US">isPredecessorOf</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#GDPTotalInCurrentPrices">
<rdfs:label xml:lang="en-US">GDPTotalInCurrentPrices</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#hasMaxLatitude">
<rdfs:label xml:lang="en-US">hasMaxLatitude</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#hasStatistics">
<rdfs:label xml:lang="en-US">hasStatistics</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#other">
<rdfs:label xml:lang="en-US">other</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#hasCurrency">
<rdfs:label xml:lang="en-US">hasCurrency</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#GDP">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">GDP</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#landArea">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">landArea</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameListIT">
<rdfs:label xml:lang="en-US">nameListIT</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#countryAreaNotes">
<rdfs:label xml:lang="en-US">countryAreaNotes</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#populationUnit">
<rdfs:label xml:lang="en-US">populationUnit</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameCurrencyRU">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nameCurrencyRU</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#hasBorderWith">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<rdfs:label xml:lang="en-US">hasBorderWith</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#landAreaUnit">
<rdfs:label xml:lang="en-US">landAreaUnit</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nationalityAR">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nationalityAR</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl">
<vitro:ontologyPrefixAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">geo</vitro:ontologyPrefixAnnot>
<rdfs:label xml:lang="en-US">geopolitical.owl</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameCurrencyEN">
<rdfs:label xml:lang="en-US">nameCurrencyEN</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameOfficialAR">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nameOfficialAR</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#validSince">
<rdfs:label xml:lang="en-US">validSince</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#isInGroup">
<rdfs:label xml:lang="en-US">isInGroup</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameListEN">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<rdfs:label xml:lang="en-US">nameListEN</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
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<rdfs:label xml:lang="en-US">hasCode</rdfs:label>
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<rdfs:label xml:lang="en-US">nameShortZH</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#isSuccessorOf">
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<rdfs:label xml:lang="en-US">isSuccessorOf</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameCurrencyES">
<rdfs:label xml:lang="en-US">nameCurrencyES</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#countryAreaTotal">
<rdfs:label xml:lang="en-US">countryAreaTotal</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#agriculturalAreaUnit">
<rdfs:label xml:lang="en-US">agriculturalAreaUnit</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#geographical_region">
<rdfs:label xml:lang="en-US">Transnational Region</rdfs:label>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouplocations"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#codeISO2">
<rdfs:label xml:lang="en-US">codeISO2</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nameOfficialFR">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nameOfficialFR</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#nationalityRU">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">nationalityRU</rdfs:label>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#self_governing">
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayLimitAnnot>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">-1</vitro:displayRankAnnot>
<rdfs:label xml:lang="en-US">self_governing</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#codeUN">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<rdfs:label xml:lang="en-US">codeUN</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#isAdministeredBy">
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<rdfs:label xml:lang="en-US">isAdministeredBy</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://aims.fao.org/aos/geopolitical.owl#landAreaTotal">
<rdfs:label xml:lang="en-US">landAreaTotal</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#nobody"/>
</rdf:Description>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:j.0="http://www.w3.org/2006/12/owl2-xml#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:j.1="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:j.2="http://www.w3.org/2008/05/skos#"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:j.3="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://www.w3.org/2000/01/rdf-schema#isDefinedBy">
<rdfs:label xml:lang="en-US">is defined by</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</vitro:selectFromExistingAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupoverview"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
</rdf:RDF>

267
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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:j.0="http://www.w3.org/2006/12/owl2-xml#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/">
<rdfs:label xml:lang="en-US">Research Resources (eagle-i)</rdfs:label>
<vitro:ontologyPrefixAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ero</vitro:ontologyPrefixAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000020">
<rdfs:label xml:lang="en-US">Biological Specimen</rdfs:label>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#studyPopulationCount">
<rdfs:label xml:lang="en-US">study population count</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>20</vitro:displayRankAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupoverview"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#documentationFor">
<rdfs:label xml:lang="en-US">documentation for</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupoverview"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0000272">
<rdfs:label xml:lang="en-US">Protocol</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>15</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#Phase4ClinicalTrial">
<rdfs:label xml:lang="en-US">Phase 4 Clinical Trial</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>4</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#accessProvidedBy">
<rdfs:label xml:lang="en-US">access provided by</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research">
<rdfs:label xml:lang="en-US">Scientific Research</rdfs:label>
<vitro:ontologyPrefixAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>scires</vitro:ontologyPrefixAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000015">
<rdfs:label xml:lang="en-US">Human Study</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#Phase2ClinicalTrial">
<rdfs:label xml:lang="en-US">Phase 2 Clinical Trial</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>5</vitro:displayRankAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000392">
<rdfs:label xml:lang="en-US">Storage Service</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGroupactivities"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>20</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#nctId">
<rdfs:label xml:lang="en-US">National Clinical Trials (NCT) number</rdfs:label>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>1</vitro:displayLimitAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupidentifiers"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>4</vitro:displayRankAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ClinicalTrials.gov registry number</vitro:publicDescriptionAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000460">
<rdfs:label xml:lang="en-US">has documentation</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupoverview"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000394">
<rdfs:label xml:lang="en-US">Production Service</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGroupactivities"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>20</vitro:displayRankAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000481">
<rdfs:label xml:lang="en-US">realizes protocol</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000006">
<rdfs:label xml:lang="en-US">Reagent</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#Phase1ClinicalTrial">
<rdfs:label xml:lang="en-US">Phase 1 Clinical Trial</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>4</vitro:displayRankAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0100026">
<rdfs:label xml:lang="en-US">Organism</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000016">
<rdfs:label xml:lang="en-US">Clinical Trial</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#irbNumber">
<rdfs:label xml:lang="en-US">Institutional Review Board (IRB) number</rdfs:label>
<vitro:inPropertyGroupAnnot rdf:resource="http://vivoweb.org/ontology#vitroPropertyGroupidentifiers"/>
<vitro:publicDescriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Institutional Review Board (IRB) number for a Clinical Trial</vitro:publicDescriptionAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#Phase3ClinicalTrial">
<rdfs:label xml:lang="en-US">Phase 3 Clinical Trial</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000004">
<rdfs:label xml:lang="en-US">Instrument</rdfs:label>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGroupequipment"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>10</vitro:displayRankAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000029">
<rdfs:label xml:lang="en-US">provides access to</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#Phase0ClinicalTrial">
<rdfs:label xml:lang="en-US">Phase 0 Clinical Trial</rdfs:label>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGrouppublications"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>6</vitro:displayLimitAnnot>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000014">
<rdfs:label xml:lang="en-US">Research Project</rdfs:label>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayRankAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGroupactivities"/>
</rdf:Description>
<rdf:Description rdf:about="http://vivoweb.org/ontology/scientific-research#protocolRealizedBy">
<rdfs:label xml:lang="en-US">protocol realized by</rdfs:label>
<vitro:selectFromExistingAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean"
>true</vitro:selectFromExistingAnnot>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
</rdf:Description>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/ERO_0000391">
<rdfs:label xml:lang="en-US">Access Service</rdfs:label>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>20</vitro:displayRankAnnot>
<vitro:inClassGroup rdf:resource="http://vivoweb.org/ontology#vitroClassGroupactivities"/>
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#public"/>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int"
>-1</vitro:displayLimitAnnot>
</rdf:Description>
</rdf:RDF>

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<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#moniker">
<vitro:prohibitedFromUpdateBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#editor"/>
<vitro:hiddenFromDisplayBelowRoleLevelAnnot rdf:resource="http://vitro.mannlib.cornell.edu/ns/vitro/role#editor"/>
<rdfs:label xml:lang="en-US">moniker (deprecated)</rdfs:label>
<vitro:displayLimitAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">3</vitro:displayLimitAnnot>
<vitro:displayRankAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#int">100</vitro:displayRankAnnot>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This property is deprecated.</vitro:descriptionAnnot>
</rdf:Description>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://www.w3.org/2000/01/rdf-schema#isDefinedBy">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
</rdf:Description>
</rdf:RDF>

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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Ontology rdf:about="http://vivoweb.org/ontology/scientific-research"/>
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/">
<vitro:ontologyPrefixAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ero</vitro:ontologyPrefixAnnot>
</owl:Ontology>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000394">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service that produces a physical object or data, such as a custom micro-array chip, a made to order antibody, or a behavioral dataset</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service that produces a physical object or data.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000006">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
NOTE: For now we are not addressing whether this is a subclass of foaf:Agent</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase1ClinicalTrial">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 1 Clinical Trial</vitro:shortDef>
<rdfs:subClassOf>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000016"/>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0100026">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>OBI: An organism is material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
NOTE that we are not addressing for now the issue of whether a foaf:Person is a subclass of obi:Organism</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An organism is a material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000016">
<rdfs:subClassOf>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000015"/>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A clinical trial is a research study using human volunteers to answer questions about treatments for diseases and conditions. Clinical trials are conducted in phases. The trials at each phase have a different purpose and help scientists answer different questions.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A research study using human volunteers to answer specifc health-related questions. </vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000020">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, part of or derived an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype.</vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An individual animal, part of or derived an animal, plant, part of a plant, or microorganism.</vitro:exampleAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A portion or quantity of a biological material for use in testing, examination, or study.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase3ClinicalTrial">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 3 Clinical Trial</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000004">
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000460"/>
</owl:onProperty>
<owl:allValuesFrom rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An implement used to facilitate work, especially precision work.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An implement used to facilitate work, especially precision work.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Equipment"/>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000272">
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A plan specification that allows different domain experts to reliably and independently reproduce a process.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase0ClinicalTrial">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 0 Clinical Trial</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase4ClinicalTrial">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 4 Clinical Trial</vitro:shortDef>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use.</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000391">
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provisi</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000014">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The comment in ero says "Maybe sameAs Investigation but is subject of funding"</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Project"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A project whose goal is the increase of knowledge, the primary aim being a greater knowledge or understanding of the subject under study.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000015">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Research project that uses or collects measurements or assessments about humans.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Research project that uses or collects measurements or assessments about humans.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000014"/>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase2ClinicalTrial">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 2 Clinical Trial</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety.</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000392">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000029">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#accessProvidedBy"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000391"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000460">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#documentationFor"/>
</owl:inverseOf>
<rdfs:range rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000481">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#protocolRealizedBy"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Service"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#documentationFor">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Document"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000460"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#accessProvidedBy">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/ERO_0000391"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000029"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#protocolRealizedBy">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000481"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#irbNumber">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. </vitro:descriptionAnnot>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#studyPopulationCount">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>number of human participants in the study (trial).</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#nctId">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials </vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>NCT00000419</vitro:exampleAnnot>
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#identifier"/>
</owl:DatatypeProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/spar/c4o/BibliographicInformationSource">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/c4o/GlobalCitationCount">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.</vitro:descriptionAnnot>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCitationFrequency">
<rdfs:range rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountSource">
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.</vitro:descriptionAnnot>
<rdfs:range rdf:resource="http://purl.org/spar/c4o/BibliographicInformationSource"/>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountValue">
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#int"/>
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountDate">
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#date"/>
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The date on which the global citation count of the cited entity was recorded from a named bibliographic information source.</vitro:descriptionAnnot>
</owl:DatatypeProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:ObjectProperty rdf:about="http://purl.org/dc/elements/1.1/isVersionOf">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This namespace - http://purl.org/dc/elements/1.1/ - does not appear to have this element.</vitro:descriptionAnnot>
</owl:ObjectProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/contributor">
<skos:scopeNote xml:lang="en">Used to link a bibliographic item to one of its contributor: can be an author, an editor, a publisher, etc.</skos:scopeNote>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/relation">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/isVersionOf">
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Document1 isVersionOf Document2</vitro:exampleAnnot>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/isReferencedBy">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to relate a reference citation to a bibliographic resource.</skos:scopeNote>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/publisher">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public definition source: http://dublincore.org/2008/01/14/dcterms.rdf# .
Examples of a Publisher include a person, an organization, or a service. Typically, the name of a Publisher should be used to indicate the entity.</vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to link a bibliographic item to its publisher.</skos:scopeNote>
</owl:ObjectProperty>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/source"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/modified"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/description"/>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/NET/c4dm/event.owl#Event">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicLocation"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasGeographicLocation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#domesticGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Only use if no specific subclasses of event:Event are appropriate.</vitro:exampleAnnot>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series.
The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent."</vitro:descriptionAnnot>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasSubjectArea"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#URLLink"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#webpage"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#realizedRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Something that happens at a given place and time.</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#internationalGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#DateTimeInterval"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#dateTimeInterval"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#description"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#geographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contactInformation"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#produced_in">
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#outcomeOf"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#product"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#isAgentIn">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#agent"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<rdfs:range rdf:resource="http://purl.org/NET/c4dm/event.owl#Event"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#product">
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#outcome"/>
<owl:inverseOf rdf:resource="http://purl.org/NET/c4dm/event.owl#produced_in"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#agent">
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<owl:inverseOf rdf:resource="http://purl.org/NET/c4dm/event.owl#isAgentIn"/>
<rdfs:domain rdf:resource="http://purl.org/NET/c4dm/event.owl#Event"/>
</owl:ObjectProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/spar/fabio/ClinicalGuideline">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/fabio/Comment">
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by</vitro:shortDef>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program.
has super-classes</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/fabio/Erratum">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A formal correction to an error introduced by the publisher into a previously published document.</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A formal correction to an error introduced by the publisher into a previously published document.</vitro:shortDef>
</owl:Class>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Person">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#domesticGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasCollaborator"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Organization"/>
</owl:allValuesFrom>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#currentMemberOf"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#geographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasResearchArea"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The most general classification of a person</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Credential"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#eligibleFor"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#internationalGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#AwardReceipt"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#awardOrHonor"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Organization">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasSubOrganization"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available.</vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Only use if no specific subclasses of foaf:organization desribe the organization.</vitro:exampleAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A generic class encompassing several types of organizations.</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</owl:allValuesFrom>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasCurrentMember"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#abbreviation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicLocation"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasGeographicLocation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contributingRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<skos:scopeNote xml:lang="en">Ued to describe an organization related to bibliographic items such as a publishing company, etc.</skos:scopeNote>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#DateTimeInterval"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#dateTimeInterval"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#freetextKeyword"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#authorInAuthorship"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Agents are things that do stuff</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#InformationResource"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#featuredIn"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>see: http://xmlns.com/foaf/spec/#term_Agent</vitro:descriptionAnnot>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#email"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Address"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#mailingAddress"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#primaryEmail"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#URLLink"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#webpage"/>
</owl:Restriction>
</rdfs:subClassOf>
<skos:scopeNote xml:lang="en">Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind.</skos:scopeNote>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Group">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contributingRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event.
see: http://xmlns.com/foaf/spec/#term_Group</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
> A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). </vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://xmlns.com/foaf/0.1/based_near">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Definition take from: http://xmlns.com/foaf/spec/#term_based_near . foaf indicates that the status of this term is "unstable". "The based_near relationship relates two "spatial things" (anything that can be somewhere), the latter typically described using the geo:lat / geo:long geo-positioning vocabulary (http://www.w3.org/2003/01/geo/wgs84_pos#). This allows us to say describe the typical latitute and longitude of, say, a Person (people are spatial things - they can be places) without implying that a precise location has been given." </vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to link an agent, related to bibliographic things, to a place where it is based near: can be a city, a monument, a building, etc.</skos:scopeNote>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://xmlns.com/foaf/0.1/lastName">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#FunctionalProperty"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://xmlns.com/foaf/spec/#term_lastName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases."</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:FunctionalProperty rdf:about="http://xmlns.com/foaf/0.1/firstName">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://xmlns.com/foaf/spec/#term_firstName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases."</vitro:descriptionAnnot>
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DatatypeProperty"/>
</owl:FunctionalProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://vivoweb.org/ontology/provenance-support#PersonAsListed">
<rdfs:subClassOf rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation. Represents one person's information from one source at one particular time.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation.</vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#authorAsListed">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/provenance-support#PersonAsListed"/>
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#listedAuthorFor"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#listedAuthorFor">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/provenance-support#PersonAsListed"/>
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:inverseOf rdf:resource="http://vivoweb.org/ontology/provenance-support#authorAsListed"/>
</owl:ObjectProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://www.w3.org/2004/02/skos/core#Concept">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An idea or notion; a unit of thought.</vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#narrower">
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .</vitro:descriptionAnnot>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#broader"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#related">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#broader">
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .</vitro:descriptionAnnot>
<owl:inverseOf rdf:resource="http://www.w3.org/2004/02/skos/core#narrower"/>
</owl:ObjectProperty>
</rdf:RDF>

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisee <http://purl.obolibrary.org/obo/RO_0000053> _:AdviseeRole .
_:AdviseeRole <http://purl.obolibrary.org/obo/RO_0000052> ?advisee .
_:AdviseeRole a vivo:AdviseeRole .
_:AdviseeRole vivo:relatedBy ?advisingRelationship .
?advisingRelationship vivo:relates _:AdviseeRole .
?advisingRelationship vivo:relates ?advisee .
?advisee vivo:relatedBy ?advisingRelationship .
} WHERE {
?advisee vivo:adviseeIn ?advisingRelationship .
FILTER NOT EXISTS {
?advisee <http://purl.obolibrary.org/obo/RO_0000053> ?adviseeRoleNode .
?adviseeRoleNode vivo:relatedBy ?advisingRelationship .
}
}

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisor <http://purl.obolibrary.org/obo/RO_0000053> _:AdvisorRole .
_:AdvisorRole <http://purl.obolibrary.org/obo/RO_0000052> ?advisor .
_:AdvisorRole a vivo:AdvisorRole .
_:AdvisorRole vivo:relatedBy ?advisingRelationship .
?advisingRelationship vivo:relates _:AdvisorRole .
?advisingRelationship vivo:relates ?advisor .
?advisor vivo:relatedBy ?advisingRelationship .
} WHERE {
?advisor vivo:advisorIn ?advisingRelationship .
FILTER NOT EXISTS {
?advisor <http://purl.obolibrary.org/obo/RO_0000053> ?advisorRoleNode .
?advisorRoleNode vivo:relatedBy ?advisingRelationship .
}
}

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person vivo:relatedBy _:Editorship .
_:Editorship a vivo:Editorship .
_:Editorship vivo:relates ?person .
_:Editorship vivo:relates ?document .
?document vivo:relatedBy _:Editorship .
} WHERE {
{
?person vivo:editorOf ?document
} UNION {
?document vivo:editor ?person
FILTER NOT EXISTS { ?person vivo:editorOf ?document }
}
FILTER NOT EXISTS {
?person vivo:relatedBy ?editorshipNode .
?editorshipNode vivo:relates ?document .
}
}

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person <http://purl.obolibrary.org/obo/RO_0000053> _:leaderRole .
_:leaderRole <http://purl.obolibrary.org/obo/RO_0000052> ?person .
_:leaderRole a vivo:LeaderRole .
_:leaderRole vivo:roleContributesTo ?org .
?org vivo:contributingRole _:leaderRole .
} WHERE {
{ ?person vivo:currentlyHeadOf ?org }
UNION
{ ?org vivo:currentlyHeadedBy ?person
FILTER NOT EXISTS { ?person vivo:currentlyHeadOf ?org }
}
FILTER NOT EXISTS {
?person <http://purl.obolibrary.org/obo/RO_0000053> ?leaderRoleNode .
?leaderRoleNode vivo:roleContributesTo ?org .
}
}

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person <http://purl.obolibrary.org/obo/RO_0000053> _:memberRole .
_:memberRole <http://purl.obolibrary.org/obo/RO_0000052> ?person .
_:memberRole a vivo:MemberRole .
_:memberRole vivo:roleContributesTo ?org .
?org vivo:contributingRole _:memberRole .
} WHERE {
{ ?person vivo:currentMemberOf ?org }
UNION
{ ?org vivo:hasCurrentMember ?person
FILTER NOT EXISTS { ?person vivo:currentMemberOf ?org }
}
FILTER NOT EXISTS {
?person <http://purl.obolibrary.org/obo/RO_0000053> ?memberRoleNode .
?memberRoleNode vivo:roleContributesTo ?org .
}
}

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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
CONSTRUCT {
?concept a skos:Concept .
} WHERE {
{ ?s vivo:hasResearchArea ?concept } UNION
{ ?s vivo:hasSubjectArea ?concept }
FILTER NOT EXISTS {
?concept a skos:Concept
}
}

11
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/grant-pre.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?role vivo:relatedBy ?grant .
?grant vivo:relates ?role
} WHERE {
?role vivo:roleContributesTo ?grant .
{ ?grant a vivo:Grant } UNION { ?grant a vivo:Contract }
}

24
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/grantAdmin.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?agent <http://purl.obolibrary.org/obo/RO_0000053> _:adminRole .
_:adminRole a vivo:AdministratorRole .
_:adminRole <http://purl.obolibrary.org/obo/RO_0000052> ?agent .
_:adminRole vivo:relatedBy ?grant .
?grant vivo:relates _:adminRole .
?grant vivo:relates ?agent .
?agent vivo:relatedBy ?grant .
} WHERE {
{ ?agent vivo:administers ?grant }
UNION
{ ?grant vivo:administeredBy ?agent
FILTER NOT EXISTS { ?agent vivo:administers ?grant }
}
FILTER NOT EXISTS {
?agent <http://purl.obolibrary.org/obo/RO_0000053> ?adminRoleNode .
?adminRoleNode a vivo:AdministratorRole .
?adminRoleNode vivo:relatedBy ?grant .
}
}

12
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/orcid.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
CONSTRUCT {
?s vivo:orcidId ?orcidURI .
?orcidURI a owl:Thing .
} WHERE {
?s vivo:orcidId ?orcidString
FILTER(isLiteral(?orcidString))
FILTER (regex(str(?orcidString), "^[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9]([0-9]|X)$"))
BIND(IRI(concat("http://orcid.org/", str(?orcidString))) AS ?orcidURI)
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/post/Grant.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?agent vivo:relatedBy ?grant .
?grant vivo:relates ?agent
} WHERE {
?agent <http://purl.obolibrary.org/obo/RO_0000053> ?role .
?role vivo:relatedBy ?grant .
{ ?grant a vivo:Grant } UNION { ?grant a vivo:Contract }
FILTER NOT EXISTS { ?grant vivo:relates ?agent }
}

14
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/post/awardConferred.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?awardReceipt vivo:assignedBy ?org .
?org vivo:assigns ?awardReceipt .
} WHERE {
?org vivo:assigns ?award .
?award a vivo:Award .
?org a foaf:Organization .
?awardReceipt vivo:relates ?award .
?awardReceipt a vivo:AwardReceipt .
}

29
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/post/awardedDegree.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> _:awardedDegree .
_:awardedDegree <http://purl.obolibrary.org/obo/RO_0002353> ?educationalProcess .
_:awardedDegree a vivo:AwardedDegree .
_:awardedDegree vivo:relates ?degree .
?degree vivo:relatedBy _:awardedDegree .
_:awardedDegree vivo:relates ?person .
?person vivo:relatedBy _:awardedDegree .
_:awardedDegree vivo:assignedBy ?org .
?org vivo:assigns _:awardedDegree .
} WHERE {
?person <http://purl.obolibrary.org/obo/RO_0000056> ?educationalProcess .
?person a foaf:Person .
?educationalProcess a vivo:EducationalProcess .
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> ?degree .
?degree a vivo:AcademicDegree .
OPTIONAL {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0000057> ?org .
?org a foaf:Organization
}
FILTER NOT EXISTS {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> ?awardedDegreeNode .
?person vivo:relatedBy ?awardedDegreeNode .
}
}

15
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/post/contributingAdvising.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?educationalProcess <http://purl.obolibrary.org/obo/BFO_0000055> ?role .
?role <http://purl.obolibrary.org/obo/BFO_0000054> ?educationalProcess .
} WHERE {
?educationalProcess vivo:contributingAdvising ?advising .
?person <http://purl.obolibrary.org/obo/RO_0000056> ?educationalProcess .
?person a foaf:Person .
?educationalProcess a vivo:EducationalProcess .
?advising vivo:relates ?role .
?role a <http://purl.obolibrary.org/obo/BFO_0000023> .
}

29
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard1-0.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Individual .
} WHERE {
?s a foaf:Person
FILTER (
EXISTS { ?s foaf:firstName ?firstName } ||
EXISTS { ?s foaf:lastName ?lastName } ||
EXISTS { ?s vivo:middleName ?middleName } ||
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage } ||
EXISTS { ?s vivo:preferredTitle ?preferredTitle } ||
EXISTS { ?s bibo:prefixName ?prefixName } ||
EXISTS { ?s bibo:suffixName ?suffixName }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

22
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard1-1.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Organization .
} WHERE {
?s a foaf:Organization
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

22
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard1-2.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Group .
} WHERE {
?s a foaf:Group
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

23
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard1-3.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
CONSTRUCT {
?s arg:ARG_2000028 _:vcard .
_:vcard arg:ARG_2000029 ?s .
_:vcard a v:Kind .
} WHERE {
?s a owl:Thing
FILTER (
EXISTS { ?s vivo:email ?email } ||
EXISTS { ?s vivo:primaryEmail ?primaryEmail } ||
EXISTS { ?s vivo:phoneNumber ?phoneNumber } ||
EXISTS { ?s vivo:primaryPhoneNumber ?primaryPhoneNumber } ||
EXISTS { ?s vivo:faxNumber ?faxNumber } ||
EXISTS { ?s vivo:mailingAddress ?address } ||
EXISTS { ?s vivo:webpage ?webpage }
)
FILTER NOT EXISTS { ?s arg:ARG_2000028 ?vcardNode }
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard22.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasTitle _:title .
_:title a v:Title .
_:title v:title ?preferredTitle .
} WHERE {
?s <http://vivoweb.org/ontology/core#preferredTitle> ?preferredTitle .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasTitle ?title
}
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2a.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:givenName ?firstName .
} WHERE {
?s foaf:firstName ?firstName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2b.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:givenName ?firstName .
} WHERE {
?s foaf:firstName ?firstName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2c.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name vivo:middleName ?middleName .
} WHERE {
?s vivo:middleName ?middleName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

14
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2d.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name vivo:middleName ?middleName .
} WHERE {
?s vivo:middleName ?middleName .
?s a foaf:Person .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2e.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:familyName ?lastName .
} WHERE {
?s foaf:lastName ?lastName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2f.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:familyName ?lastName .
} WHERE {
?s foaf:lastName ?lastName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2g.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:honorificPrefix ?prefixName .
} WHERE {
?s bibo:prefixName ?prefixName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2h.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:honorificPrefix ?prefixName .
} WHERE {
?s bibo:prefixName ?prefixName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2i.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?vcard v:hasName _:name .
_:name a v:Name .
_:name v:honorificSuffix ?suffixName .
} WHERE {
?s bibo:suffixName ?suffixName .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasName ?name
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard2j.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?name v:honorificSuffix ?suffixName .
} WHERE {
?s bibo:suffixName ?suffixName .
?s arg:ARG_2000028 ?vcard .
?vcard v:hasName ?name
}

16
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard3.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasEmail _:email .
_:email a v:Email .
_:email v:email ?email .
} WHERE {
?s vivo:email ?email .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasEmail ?emailnode
}
}

18
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard4.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasEmail _:primaryEmail .
_:primaryEmail a v:Email .
_:primaryEmail a v:Work .
_:primaryEmail v:email ?primaryEmail .
} WHERE {
?s vivo:primaryEmail ?primaryEmail .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasEmail ?email .
?email a v:Work .
}
}

17
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard5.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasTelephone _:telephone .
_:telephone a v:Telephone .
_:telephone a v:Voice .
_:telephone v:telephone ?phoneNumber .
} WHERE {
?s vivo:phoneNumber ?phoneNumber .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasTelephone ?telephoneNode .
}
}

19
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard6.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasTelephone _:primaryTelephone .
_:primaryTelephone a v:Telephone .
_:primaryTelephone a v:Voice .
_:primaryTelephone a v:Work .
_:primaryTelephone v:telephone ?primaryPhoneNumber .
} WHERE {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasTelephone ?telephoneNode .
?vcard a v:Work .
}
}

18
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard7.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasTelephone _:fax .
_:fax a v:Telephone .
_:fax a v:Fax.
_:fax v:telephone ?faxNumber .
} WHERE {
?s vivo:faxNumber ?faxNumber .
?s arg:ARG_2000028 ?vcard .
FILTER NOT EXISTS {
?vcard v:hasTelephone ?faxNode .
?faxNode a v:Fax .
}
}

43
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/additions/vcard8.sparql Normal file
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasAddress ?address .
?address a v:Address .
?address v:streetAddress ?streetAddress .
?address v:locality ?addressCity .
?address v:region ?addressState .
?address v:postalCode ?addressPostalCode .
?address v:country ?addressCountry .
?address <http://purl.obolibrary.org/obo/RO_0001025> ?location .
?location <http://purl.obolibrary.org/obo/RO_0001015> ?address .
} WHERE {
?s vivo:mailingAddress ?address .
OPTIONAL { ?address vivo:addressCity ?addressCity }
OPTIONAL { ?address vivo:addressState ?addressState }
OPTIONAL { ?address vivo:addressPostalCode ?addressPostalCode }
OPTIONAL { ?address vivo:addressCountry ?addressCountry }
OPTIONAL { ?address vivo:hasGeographicLocation ?location }
?s arg:ARG_2000028 ?vcard .
OPTIONAL {
?address vivo:address1 ?address1 .
?address vivo:address2 ?address2 .
?address vivo:address3 ?address3 .
BIND (CONCAT(?address1, ", ", ?address2, ", ", ?address3) AS ?streetAddress)
}
OPTIONAL {
?address vivo:address1 ?address1 .
?address vivo:address2 ?address2 .
FILTER NOT EXISTS { ?address vivo:address3 ?address3 }
BIND (CONCAT(?address1, ", ", ?address2) AS ?streetAddress)
}
OPTIONAL {
?address vivo:address1 ?address1
BIND(?address1 as ?streetAddress)
}
FILTER NOT EXISTS {
?vcard v:hasAddress ?addressNode
}
}

19
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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?vcard v:hasURL ?webpage .
?webpage a v:URL .
?webpage v:url ?linkURI .
?webpage rdfs:label ?linkAnchorText
} WHERE {
?s vivo:webpage ?webpage .
?webpage vivo:linkURI ?linkURI .
?s arg:ARG_2000028 ?vcard .
OPTIONAL {
?webpage vivo:linkAnchorText ?linkAnchorText
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/AdvisingRelationshipDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisor vivo:advisorIn ?advisingRelationship .
?advisingRelationship vivo:advisor ?advisor
} WHERE {
?advisor vivo:advisorIn ?advisingRelationship .
OPTIONAL {
?advisingRelationship vivo:advisor ?advisor
}
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/AdvisingRelationshipDel2.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisee vivo:adviseeIn ?advisingRelationship .
?advisingRelationship vivo:advisee ?advisee .
} WHERE {
?advisee vivo:adviseeIn ?advisingRelationship .
OPTIONAL {
?advisingRelationship vivo:advisee ?advisee .
}
}

14
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/EditorshipDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?person vivo:editorOf ?document .
?document vivo:editor ?person
} WHERE {
{
?person vivo:editorOf ?document
} UNION {
?document vivo:editor ?person
}
}

15
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/conceptDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
CONSTRUCT {
?concept a owl:Thing .
} WHERE {
GRAPH ?g {
{ ?s vivo:hasResearchArea ?concept .
?concept a owl:Thing }
UNION
{ ?s vivo:hasSubjectArea ?concept .
?concept a owl:Thing }
} FILTER (!regex(str(?g), "kb-inf"))
}

11
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/grant-pre-del.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?role vivo:roleContributesTo ?grant .
?grant vivo:contributingRole ?role .
} WHERE {
?role vivo:roleContributesTo ?grant .
{ ?grant a vivo:Grant } UNION { ?grant a vivo:Contract }
}

10
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/orcidDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
CONSTRUCT {
?s vivo:orcidId ?orcidString .
} WHERE {
?s vivo:orcidId ?orcidString
FILTER(isLiteral(?orcidString))
FILTER (regex(str(?orcidString), "^[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9][0-9]-[0-9][0-9][0-9]([0-9]|X)$"))
}

12
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/post/awardConferredDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?award vivo:assignedBy ?org .
?org vivo:assigns ?award .
} WHERE {
?org vivo:assigns ?award .
?award a vivo:Award .
?org a foaf:Organization .
}

13
webapp/src/main/webapp/WEB-INF/ontologies/update15to16/sparqlConstructs/deletions/post/awardedDegreeDel.sparql Normal file
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PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> ?degree .
?degree <http://purl.obolibrary.org/obo/RO_0002353> ?educationalProcess .
} WHERE {
?educationalProcess <http://purl.obolibrary.org/obo/RO_0002234> ?degree .
?person <http://purl.obolibrary.org/obo/RO_0000056> ?educationalProcess .
?degree a vivo:AcademicDegree .
OPTIONAL { ?degree <http://purl.obolibrary.org/obo/RO_0002353> ?educationalProcess }
}

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PREFIX arg: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX v: <http://www.w3.org/2006/vcard/ns#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
CONSTRUCT {
?s foaf:firstName ?firstName .
?s foaf:lastName ?lastName .
?s vivo:middleName ?middleName .
?s bibo:prefixName ?prefix .
?s bibo:suffixName ?suffix .
?s vivo:email ?email .
?s vivo:primaryEmail ?primaryEmail .
?s vivo:phoneNumber ?phoneNumber .
?s vivo:primaryPhoneNumber ?primaryPhoneNumber .
?s vivo:faxNumber ?faxNumber .
?s vivo:mailingAddress ?address .
?address vivo:mailingAddressFor ?s .
?address a ?addressType .
?address vivo:address1 ?address1 .
?address vivo:address2 ?address2 .
?address vivo:address3 ?address3 .
?address vivo:addressCity ?city .
?address vivo:addressState ?state .
?address vivo:addressPostalCode ?postalCode .
?address vivo:addressCountry ?country .
?address vivo:hasGeographicLocation ?location .
?location vivo:geographicLocationOf ?address .
?s vivo:webpage ?webpage .
?webpage vivo:webpageOf ?s .
?webpage vivo:linkAnchorText ?linkAnchorText .
?webpage vivo:linkURI ?linkURI .
?webpage a vivo:URLLink .
} WHERE {
{
?s foaf:firstName ?firstName .
}
UNION {
?s foaf:lastName ?lastName .
}
UNION {
?s vivo:middleName ?middleName .
?s a foaf:Person .
}
UNION {
?s bibo:prefixName ?prefix
}
UNION {
?s bibo:suffixName ?suffix
}
UNION {
?s vivo:email ?email
}
UNION {
?s vivo:primaryEmail ?primaryEmail
}
UNION {
?s vivo:phoneNumber ?phoneNumber
}
UNION {
?s vivo:primaryPhoneNumber ?primaryPhoneNumber
}
UNION {
?s vivo:faxNumber ?faxNumber
}
UNION {
?s vivo:mailingAddress ?address .
}
UNION {
?address vivo:mailingAddressFor ?s .
}
UNION {
?s vivo:mailingAddress ?address .
?address a ?addressType
FILTER(regex(str(?addressType),"vivoweb.org/ontology/core"))
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:address1 ?address1 .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:address2 ?address2 .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:address3 ?address3 .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:addressCity ?city .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:addressState ?state .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:addressPostalCode ?postalCode .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:addressCountry ?country .
}
UNION {
?s vivo:mailingAddress ?address .
?address vivo:hasGeographicLocation ?location .
}
UNION {
?s vivo:mailingAddress ?address .
?location vivo:geographicLocationOf ?address .
}
UNION {
?s vivo:webpage ?webpage
}
UNION {
?webpage vivo:webpageOf ?s
}
UNION {
?s vivo:webpage ?webpage
}
UNION {
?s vivo:webpage ?webpage .
?webpage vivo:linkURI ?linkURI
}
UNION {
?s vivo:webpage ?webpage .
?webpage vivo:linkAnchorText ?linkAnchorText
}
}

10
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@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> rdf:type owl:Thing .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:updatedOntology <http://vivoweb.org/ontology/core> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:fromOntologyVersion "1.5" .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:toOntologyVersion "1.6" .

8
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PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
ASK {
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology ?u .
?u vitro:toOntologyVersion "1.7" .
}

0
webapp/src/main/webapp/WEB-INF/ontologies/update16to17/diff.tab.txt Normal file
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webapp/src/main/webapp/WEB-INF/ontologies/update16to17/oldAnnotations/additionalHiding.n3 Normal file
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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix : <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix datagetter: <java:edu/cornell/mannlib/vitro/webapp/utils/datagetter/> .
@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> .
@prefix local: <http://vitro.mannlib.cornell.edu/ns/vitro/siteConfig/> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> .
# warning: don't use blank nodes; the display model doesn't currently support them.
<http://purl.obolibrary.org/obo/RO_0000053>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
<http://purl.obolibrary.org/obo/ARG_2000028>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:relates
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:relatedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:assigns
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:assignedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
<http://purl.obolibrary.org/obo/RO_0000056>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .

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webapp/src/main/webapp/WEB-INF/ontologies/update16to17/oldVersion/empty.owl Normal file
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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:ocrer="http://purl.org/net/OCRe/research.owl#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:cito="http://purl.org/spar/cito/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vcard="http://www.w3.org/2006/vcard/ns#"
xmlns:ocresd="http://purl.org/net/OCRe/study_design.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
</rdf:RDF>

28
webapp/src/main/webapp/WEB-INF/ontologies/update16to17/sparqlConstructs/additions/nothing.sparql Normal file
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

10
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@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> rdf:type owl:Thing .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:updatedOntology <http://vivoweb.org/ontology/core> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:fromOntologyVersion "1.6" .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:toOntologyVersion "1.7" .

8
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/askUpdated.sparql Normal file
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PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
ASK {
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology ?u .
?u vitro:toOntologyVersion "1.7" .
}

0
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/diff.tab.txt Normal file
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45
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/oldAnnotations/additionalHiding.n3 Normal file
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@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix : <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration#> .
@prefix display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix datagetter: <java:edu/cornell/mannlib/vitro/webapp/utils/datagetter/> .
@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> .
@prefix local: <http://vitro.mannlib.cornell.edu/ns/vitro/siteConfig/> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> .
# warning: don't use blank nodes; the display model doesn't currently support them.
<http://purl.obolibrary.org/obo/RO_0000053>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
<http://purl.obolibrary.org/obo/ARG_2000028>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:relates
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:relatedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:assigns
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
vivo:assignedBy
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .
<http://purl.obolibrary.org/obo/RO_0000056>
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:nobody ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:nobody .

8932
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/oldAnnotations/initialTBoxAnnotations.n3 Normal file
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24
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/oldVersion/empty.owl Normal file
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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:ocrer="http://purl.org/net/OCRe/research.owl#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:cito="http://purl.org/spar/cito/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vcard="http://www.w3.org/2006/vcard/ns#"
xmlns:ocresd="http://purl.org/net/OCRe/study_design.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
</rdf:RDF>

28
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/sparqlConstructs/additions/nothing.sparql Normal file
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/sparqlConstructs/additions/post/nothing.sparql Normal file
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/sparqlConstructs/deletions/nothing.sparql Normal file
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

28
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/sparqlConstructs/deletions/post/nothing.sparql Normal file
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PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX swrl: <http://www.w3.org/2003/11/swrl#>
PREFIX swrlb: <http://www.w3.org/2003/11/swrlb#>
PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>
PREFIX bibo: <http://purl.org/ontology/bibo/>
PREFIX c4o: <http://purl.org/spar/c4o/>
PREFIX cito: <http://purl.org/spar/cito/>
PREFIX event: <http://purl.org/NET/c4dm/event.owl#>
PREFIX fabio: <http://purl.org/spar/fabio/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX geo: <http://aims.fao.org/aos/geopolitical.owl#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX ocrer: <http://purl.org/net/OCRe/research.owl#>
PREFIX ocresd: <http://purl.org/net/OCRe/study_design.owl#>
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
PREFIX vitro-public: <http://vitro.mannlib.cornell.edu/ns/vitro/public#>
PREFIX vivo: <http://vivoweb.org/ontology/core#>
PREFIX scires: <http://vivoweb.org/ontology/scientific-research#>
CONSTRUCT {
} WHERE {
}

10
webapp/src/main/webapp/WEB-INF/ontologies/update17to18/success.n3 Normal file
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@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> rdf:type owl:Thing .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:updatedOntology <http://vivoweb.org/ontology/core> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:fromOntologyVersion "1.6" .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.6> vitro:toOntologyVersion "1.7" .

1
webapp/src/main/webapp/WEB-INF/resources/reasoner_plugins.txt Normal file
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edu.cornell.mannlib.vitro.webapp.reasoner.plugin.DisableSameAs

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webapp/src/main/webapp/WEB-INF/resources/startup_listeners.txt Normal file
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#
# ServletContextListeners for VIVO, to be instantiated and run by the StartupManager.
#
# For more information,
# https://sourceforge.net/apps/mediawiki/vivo/index.php?title=The_StartupManager
#
edu.cornell.mannlib.vitro.webapp.servlet.setup.JvmSmokeTests
edu.cornell.mannlib.vitro.webapp.application.ApplicationSetup
edu.cornell.mannlib.vitro.webapp.config.ConfigurationPropertiesSetup
edu.cornell.mannlib.vitro.webapp.config.ConfigurationPropertiesSmokeTests
edu.cornell.mannlib.vitro.webapp.utils.developer.DeveloperSettings$Setup
edu.cornell.mannlib.vitro.webapp.application.ApplicationImpl$ComponentsSetup
edu.cornell.mannlib.vitro.webapp.config.RevisionInfoSetup
edu.cornell.mannlib.vitro.webapp.email.FreemarkerEmailFactory$Setup
edu.cornell.mannlib.vitro.webapp.servlet.setup.ConfigurationModelsSetup
edu.cornell.mannlib.vitro.webapp.servlet.setup.ContentModelSetup
edu.cornell.mannlib.vitro.webapp.web.images.PlaceholderUtil$Setup
edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup
# Invokes process to perform updates to align with ontology changes if needed -->
# edu.cornell.mannlib.vitro.webapp.migration.rel16.Release16Migrator
# edu.cornell.mannlib.vitro.webapp.migration.rel17.Release17Migrator
edu.cornell.mannlib.vitro.webapp.migration.rel18.Release18Migrator
edu.cornell.mannlib.vitro.webapp.application.ApplicationImpl$ReasonersSetup
edu.cornell.mannlib.vitro.webapp.servlet.setup.SimpleReasonerSetup
# Must run after JenaDataSourceSetup
edu.cornell.mannlib.vitro.webapp.servlet.setup.ThemeInfoSetup
edu.cornell.mannlib.vitro.webapp.auth.permissions.PermissionRegistry$Setup
edu.cornell.mannlib.vitro.webapp.auth.permissions.PermissionSetsSmokeTest
edu.cornell.mannlib.vitro.webapp.auth.policy.bean.PropertyRestrictionBean$Setup
edu.cornell.mannlib.vitro.webapp.auth.policy.setup.CommonPolicyFamilySetup
edu.cornell.mannlib.vitro.webapp.auth.policy.RootUserPolicy$Setup
edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy$Setup
edu.cornell.mannlib.vitro.webapp.auth.policy.RestrictHomeMenuItemEditingPolicy$Setup
edu.cornell.mannlib.vitro.webapp.services.shortview.ShortViewServiceSetup
edu.cornell.mannlib.vitro.webapp.visualization.setup.VisualizationSetup
edu.ucsf.vitro.opensocial.OpenSocialSmokeTests
# For multiple language support
edu.cornell.mannlib.vitro.webapp.i18n.selection.LocaleSelectionSetup
# The search indexer uses a "public" permission, so the PropertyRestrictionPolicyHelper
# and the PermissionRegistry must already be set up.
edu.cornell.mannlib.vitro.webapp.searchindex.SearchIndexerSetup
edu.cornell.mannlib.vitro.webapp.controller.freemarker.FreemarkerSetup
edu.cornell.mannlib.vitro.webapp.freemarker.config.FreemarkerConfiguration$Setup
# On shutdown, this will kill the background thread started by Apache Commons File Upload
org.apache.commons.fileupload.servlet.FileCleanerCleanup
# The VClassGroupCache index uses a "public" permission, so the PropertyRestrictionPolicyHelper
# and the PermissionRegistry must already be set up.
edu.cornell.mannlib.vitro.webapp.dao.jena.VClassGroupCache$Setup
edu.cornell.mannlib.vivo.orcid.OrcidContextSetup
# This should be near the end, because it will issue a warning if the connection to Solr times out.
edu.cornell.mannlib.vitro.webapp.servlet.setup.SolrSmokeTest

12
webapp/src/main/webapp/WEB-INF/rich-export/address/address.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
CONSTRUCT {
?address ?property ?object .
} WHERE {
PERSON_URI obo:ARG_2000028 ?vcard .
?vcard vcard:hasAddress ?address .
?address ?property ?object .
}

12
webapp/src/main/webapp/WEB-INF/rich-export/address/locationOfAddress.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
CONSTRUCT {
?geographicLocation ?property ?object .
} WHERE {
PERSON_URI obo:ARG_2000028 ?vcard .
?vcard vcard:hasAddress ?address .
?address obo:RO_0001025 ?geographicLocation .
?geographicLocation ?property ?object .
}

16
webapp/src/main/webapp/WEB-INF/rich-export/advising/advisee.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?advisee ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee ?property ?object .
}

21
webapp/src/main/webapp/WEB-INF/rich-export/advising/adviseesDegreeAlt.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?degree ?property ?object
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0002234 ?awardedDegree .
?awardedDegree core:relates ?degree .
?degree a core:AcademicDegree .
?degree ?property ?object
}

20
webapp/src/main/webapp/WEB-INF/rich-export/advising/adviseesEducationEndDate.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?dateTimeValue ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining core:dateTimeInterval ?dateTimeInterval .
?dateTimeInterval core:end ?dateTimeValue .
?dateTimeValue ?property ?object .
}

21
webapp/src/main/webapp/WEB-INF/rich-export/advising/adviseesEducationalInsitituionAlt.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
CONSTRUCT {
?educationalInstitution rdfs:label ?label
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining obo:RO_0000057 ?educationalInstitution .
?educationalInstitution a foaf:Organization .
?educationalInstitution rdfs:label ?label
}

11
webapp/src/main/webapp/WEB-INF/rich-export/advising/associatedDegree.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
CONSTRUCT {
?degree ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:degreeCandidacy ?degree .
?degree ?property ?object .
}

10
webapp/src/main/webapp/WEB-INF/rich-export/advising/associatedEducationalTraining.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?educationalTraining ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:advisingContributionTo ?educationalTraining .
?educationalTraining ?property ?object .
}

18
webapp/src/main/webapp/WEB-INF/rich-export/advising/associatedEducationalTrainingAlt.sparql Normal file
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@ -0,0 +1,18 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX obo: <http://purl.obolibrary.org/obo/>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?educationalTraining ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?advisingRelationship .
?advisingRelationship a core:AdvisingRelationship .
?advisingRelationship core:relates ?advisee .
?advisee a foaf:Person .
?advisee obo:RO_0000053 ?adviseeRole .
?adviseeRole a core:AdviseeRole .
?adviseeRole core:relatedBy ?advisingRelationship .
?advisee core:relates ?educationalTraining .
?educationalTraining a core:EducationalProcess .
?educationalTraining ?property ?object .
}

11
webapp/src/main/webapp/WEB-INF/rich-export/award/award.sparql Normal file
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@ -0,0 +1,11 @@
PREFIX core: <http://vivoweb.org/ontology/core#>
CONSTRUCT {
?award ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?awardReceipt .
?awardReceipt a core:AwardReceipt .
?awardReceipt core:relates ?award .
?award a core:Award .
?award ?property ?object .
}

12
webapp/src/main/webapp/WEB-INF/rich-export/award/conferringOrganization.sparql Normal file
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PREFIX core: <http://vivoweb.org/ontology/core#>
PREFIX foaf: <http://xmlns.com/foaf/0.1/>
CONSTRUCT {
?organization ?property ?object .
} WHERE {
PERSON_URI core:relatedBy ?awardReceipt .
?awardReceipt a core:AwardReceipt .
?awardReceipt core:assignedBy ?organization .
?organization a foaf:Organization .
?organization ?property ?object .
}

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