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Author SHA1 Message Date
Tim Worrall
488f7ce265 there were duplicate freemarker variables being used; resolved this by changing the name of the variable used for the application or site name 2014-06-20 13:11:50 -04:00
j2blake
e411a2224e VIVO-795 Start a procedure for including docs in the release. 2014-06-19 16:18:13 -04:00
Tim Worrall
dfb6f2a57f do not display primary positions on the manage people page 2014-06-19 12:13:53 -04:00
Tim Worrall
f539837b6d do not display primary positions on the manage people page 2014-06-19 12:13:02 -04:00
j2blake
5ef8df4a49 Merge branch 'maint-rel-1.7' into develop 2014-06-18 17:34:27 -04:00
j2blake
daae32a0b0 VIVO-801 Move RDB migrator from VIVO to Vitro 
Older instances of Vitro might want to use it.
 2014-06-18 17:34:10 -04:00
j2blake
e2ad55951b Merge branch 'maint-rel-1.7' into develop 2014-06-18 17:17:05 -04:00
j2blake
a28bb52e5c VIVO-801 Improved the prompts on the RDB migrator 2014-06-18 17:16:38 -04:00
Tim Worrall
55a6ad5204 fixed autocomplete issue with adding organizations to authorships 2014-06-18 16:35:22 -04:00
Tim Worrall
700131cfee fixed autocomplete issue with adding organizations to authorships 2014-06-18 16:34:23 -04:00
j2blake
1a57f84adf Merge branch 'maint-rel-1.7' into develop 2014-06-18 12:03:05 -04:00
j2blake
87ecccb554 VIVO-801 Added some flexibility to the RDB migration. 
The tool now detects if you have additional RDB models, and offers the option of skipping them.
Also, the tool runs with 2G of memory.
 2014-06-18 12:02:40 -04:00
Tim Worrall
5927677db8 VIVO-798: fix hidden research grants issue 2014-06-17 14:34:31 -04:00
Tim Worrall
e811b4bd9c Merge branch 'develop' of https://github.com/vivo-project/VIVO into develop 2014-06-17 14:33:55 -04:00
Tim Worrall
6bab6b9167 VIVO-798: fix hidden research grants issue 2014-06-17 14:33:38 -04:00
Holly Mistlebauer
cd51566bff Holly committed final changes to test cases for rc-1. 2014-06-17 12:15:24 -04:00
Holly Mistlebauer
9498b865e7 Another commit for rc 1 test case changes from Holly. 2014-06-16 17:53:17 -04:00
Holly Mistlebauer
9d7ebe1cae More test case changes from 1.7 rc 1 by Holly. 2014-06-16 17:26:32 -04:00
Holly Mistlebauer
2754ad7da8 Holly made another batch of test case changes for release 1.7, rc 1. 2014-06-16 13:40:25 -04:00
Holly Mistlebauer
64e5eacf3b Holly made first batch of test case changes for release 1.7 rc 1. 2014-06-16 11:32:57 -04:00
Tim Worrall
6279d4f770 Merge branch 'develop' of https://github.com/vivo-project/VIVO into develop 2014-06-16 10:50:18 -04:00
j2blake
d61709730d VIVO 767 Listen for changes to VCards and re-index. 2014-06-14 11:04:59 -04:00
Tim Worrall
be4fba9b48 ensure that vcard individuals that are authors do not display as links 2014-06-13 16:33:22 -04:00
Tim Worrall
94f7fea0c2 updated list view templates to ensure correct reference of element ID 2014-06-13 16:23:46 -04:00
j2blake
38658bdcd9 VIVO-738 When ORCID ID is removed, it is deleted also. 2014-06-13 16:01:51 -04:00
j2blake
cd355373a6 VIVO 746, at startup, remove obsolete Permissions from the user accounts model. 
Also, get rid of UpdatePermissionSetUris, which supported the transition from 1.4 to 1.5.
 2014-06-13 10:27:40 -04:00
j2blake
ce0a8a8512 VIVO-773 remove references to IRI-0.8 library. 
Converted to 0.9.6
 2014-06-13 10:25:27 -04:00
Tim Worrall
751e752778 minor tweak to list view 2014-06-12 16:43:07 -04:00
brianjlowe
106325ba72 holding required empty directories in git 2014-06-12 14:08:41 -04:00
Tim Worrall
4e5071758e set display levels on position subtypes so that th eprimary position can be filtered out of list view 2014-06-12 10:34:37 -04:00
j2blake
2b25bfa851 Merge commit '0c21855fc5bf12f75e14d4f598f51a3120ec8005' into feature/TDBfromRDB2 2014-06-11 16:47:49 -04:00
brianjlowe
0c21855fc5 tweak to initial tbox annotations 2014-06-11 15:14:39 -04:00
brianjlowe
a607b240a5 VIVO-786 and VIVO-751 changes to default property annotations and 1.7 migration 2014-06-11 14:19:00 -04:00
j2blake
153cd6f117 VIVO-773 create the RDB to TDB migration utility. 2014-06-11 12:07:05 -04:00
Tim Worrall
67ce187eac minor design and css changes for person-level visualization pages 2014-06-10 12:08:41 -04:00
Tim Worrall
c2d24cb74d VIVO-454 2014-06-09 17:11:34 -04:00
j2blake
f4541133b6 VIVO-773 guard against RDB data that has not been migrated. 2014-06-09 15:38:20 -04:00
j2blake
228adaaf13 VIVO-719 Improve the user interface 2014-06-09 15:14:06 -04:00
Tim Worrall
15169ca894 fixed query subject in generator 2014-06-09 14:34:11 -04:00
j2blake
52caf0237f VIVO-719 Create the first attempt at restore. 2014-06-06 17:15:20 -04:00
Tim Worrall
9ef66e8764 VIVO-694: resolved null pointer exception with web pages 2014-06-06 16:22:18 -04:00
Tim Worrall
2cc05784c7 VIVO-508: clean up old IE css files and references 2014-06-06 14:52:57 -04:00
Tim Worrall
0b51403690 VIVO-559: add abiliy to delete degree candidacy in edit mode 2014-06-06 12:18:39 -04:00
Tim Worrall
a9b3bfd9c2 VIVO-785: make middle name optional in list view and fix advisor genertor to clarify role 2014-06-06 11:04:23 -04:00
Tim Worrall
8c1e3cde93 VIVO-654: make role label fields on custom forms optional input, not required 2014-06-04 16:56:49 -04:00
Tim Worrall
78ee69ee00 VIVO-743: new custom forms for adding participant to project andcontributor to grant/contract 2014-06-03 13:02:24 -04:00
j2blake
b823bb4eae VIVO-773 Remove "connectDB" function of advanced data tools. 
It was tied up with RDB. It could have been converted, but there was little interest.
 2014-06-03 10:28:27 -04:00
Tim Worrall
cf64f9cf85 updates to list view to correctly access name parts 2014-06-02 11:33:52 -04:00
j2blake
8b33229fdd VIVO-773 Update the JENA libraries and adjust to the changes 
Replace the JAR files with more current ones.
Add a one-line change to BaseInfGraph (from the Jena source), so it will work with Pellet 2.3.1
Adjust all implementations of Graph to include new methods and remove old ones.
Add annotations and generics to reduce compiler warnings.
Remove all dependencies on RDB, which is no longer supported.
   This requires considerable refactoring of JenaIngestController, RDFUploadController, listModels.jsp
Refactor the ModelMaker uses
   Remove VitroJenaModelMaker,
   Revise VitroInterceptingModelMaker to be configurable for Config or Content models
Add debug logging code to ModelChangeImpl ChangeSetImpl, RDFServiceJena.
Add TDB support: RDFServiceFactoryTDB, RDFServiceTDB
   Refactor RDFServiceJena and RDFServiceSDB so much of the code can be reused by RDFServiceTDB
Accomodate two RDFService instances - one for Configuration models and one for Content models.
   Changes to RDFServiceUtils, RDFServiceSetup
   Configuration models use TDB directory in Vitro home directory
Handle bulk updating:
   Jena has deprecated bulk operations, and their models classes no longer use the bulk updaters
   Create a VitroModelFactory to use instead of the ModelFactory, when bulk updating is required.
   Create adapter classes: BulkUpdatingModel, BulkUpdatingOntModel, AbstractModelDecorator
Make the configuration model setup algorithms uniform
   Combine ApplicationModelSetup and UserModelSetup into ConfigurationModelsSetup
 2014-06-01 18:26:31 -04:00
Tim Worrall
02a2fe600c VIVO-743: custom form to add a person to a project 2014-05-30 16:22:53 -04:00