Create LabelsAcrossContextNodes to replace AdditionalURIsForContextNodes. It's more configurable.
Create SelectQueryUriFinder to replace AdditionalUrisForVCards. It's more configurable.
Rename SimpleSparqlQueryDocumentModifier to SelectQueryDocumentModifier, to conform.
Radically simplify the VIVO search configuration, omitting all special cases except those for VCards.
Get rid of the SearchIndexerSetup.Committer listener class. This functionality becomes internal to UpdateUrisTask.
Use shorter names for Event.Type values, so the display will be more compact.
ALLTEXTUNSTEMMED is not automatically populated from ALLTEXT, so change the default target field on
SimpleSparqlQueryDocumentModifier to include both of them.
Trivial cleanup in UpdateDocumentWorkUnit.
Create StackTraceLayout, a simple Log4J layout that will print the stack trace for each call.
Used for diagnosing the source of uninformative log messages.
Use no-argument constructors, supplying data through the ContextModelsUser interface as needed.
Add toString() methods to IndexingUriFinders, DocumentModifiers and SearchIndexExcluders
Create a bridge implementation of SearchIndexerImpl that just wraps around an old IndexBuilder.
Modify client code:
Application, BasicAuthenticator, SearchServiceController, SparqlUpdateApiController,
UpdateUrisInIndex and VClassGroupCache
Rewrite IndexController to use AJAX and to show the current status and history of the indexer events.
There are still some differences between the two, and I expect some answers from Jon and Brian regarding irregularities in the ontologies.
The Pellet libraries have not yet been removed.
Replace PelletListener with a TBoxReasonerModule in the Application.
The reasoner will be accessible only through here, not as a context attribute or through the WebappDaoFactory.
Split out the initialization of the TBox reasoner from SimpleReasonerSetup.
Break out the filtering of TBox changes into a ConfiguredReasonerListener.
Refactor the threading logic into a BasicTBoxReasonerDriver.
Add a factory for creating VitroBackgroundThreads in an Executor.
Isolate the actual reasoner into a TBoxReasoner implementation. In this case, PelletTBoxReasoner.
Combine the consistency flag, error flag, explanation, and running status into one TBoxReasonerStatus object.
