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73 commits

Author SHA1 Message Date
Georgy Litvinov
f6b8f491f6 Added search ontology 2020-08-20 17:23:11 +02:00
Georgy Litvinov
ae141a822a Fill queryBuiler with fields and filters 2020-08-20 17:03:44 +02:00
Georgy Litvinov
9afa45ac3c Article's rubrics 2020-08-18 16:03:52 +02:00
Georgy Litvinov
e402425daa Sum all rubrics of article while indexing 2020-08-18 15:26:22 +02:00
Georgy Litvinov
aac411ce41 Added ontologies 2020-08-17 14:44:46 +02:00
Georgy Litvinov
ac75d757a8 Modified ontology 2020-08-13 19:36:57 +02:00
Georgy Litvinov
48636ef3ce Modifications for fixed ontology 2020-08-13 18:21:03 +02:00
Georgy Litvinov
4bd5b3df21 Fixed mistake in query 2020-08-10 11:24:21 +02:00
Georgy Litvinov
ce3840e8a5 Added custom fields 2020-08-10 11:18:37 +02:00
Georgy Litvinov
3ee4e6de2c Fix for previous commit 2020-08-05 16:54:14 +02:00
Georgy Litvinov
b2d0d80acc Added articles info to excerpt 2020-08-05 16:26:26 +02:00
Georgy Litvinov
e80962629c Templates and SPARQL requests for rubrics, elenph excerpts and articles 2020-07-08 13:20:58 +02:00
Mike Conlon
94c06ebec0
Add CollectionProcess and CurationProcess (#141) 
* Add CollectionProcess and CurationProcess

Resolves: 
- https://jira.lyrasis.org/browse/VIVO-1699 and
- https://jira.lyrasis.org/browse/VIVO-1700
 2020-03-17 19:54:26 -04:00
Ralph O'Flinn
96e9f507c5 [maven-scm-plugin] prepare development vivo-1.11.2-SNAPSHOT 2020-03-07 10:46:41 -06:00
Ralph O'Flinn
cad6a66f39 [maven-scm-plugin] prepare release vivo-1.11.1 2020-03-07 10:45:36 -06:00
Andrew Woods
9b97bcd98c code review 2020-02-24 18:41:36 -05:00
Andrew Woods
56d2ee130f Update example default triple store from SDB to TDB 
Resolves: https://jira.lyrasis.org/browse/VIVO-1741
 2020-02-24 17:05:40 -05:00
Ralph O'Flinn
4b18675112 [maven-scm-plugin] prepare development vivo-1.11.1-SNAPSHOT 2019-10-21 04:38:26 -05:00
Ralph O'Flinn
f0d3a70fba [maven-scm-plugin] prepare release vivo-1.11.0 2019-10-21 04:35:52 -05:00
Graham Triggs
d3b377b3a7 [VIVO-1670] ORCID - Disable Step 2 and Internationalization (#130) 
* Internationalize ORCiD add an iD
* ORCID Internationalization, allow Step 2 to be disabled if only a public API key

Resolves: https://jira.duraspace.org/browse/VIVO-1670
 2019-08-09 09:29:00 -04:00
Don Elsborg
06d266ea94 Vivo 1287 (#137) 
Remove five subclass axioms from five classes that had been subclass of skos:Concept; add subClassOf(DateTimeValuePrecision, Quality)

Resolves VIVO-1287
https://jira.duraspace.org/browse/VIVO-1287
 2019-08-09 15:14:31 +03:00
Graham Triggs
f597b7ee42 [VIVO-1415] Add publication claiming from PubMed and CrossRef (#129) 
* Claiming interface for DOI and PMID
* Allow http://doi.org urls in the claim process
* Make button i18n compliant
* Check Editor already claimed, error for no citation, PUMCIDs fixed
* Fixed gnarly DOI containing semi-colon (removed semi-colon as separator), match more DOI formats internally, improve AUTH restrictions
* Add Wilma themes
* Add permissions to allow proxy editors
* Update DOI resolver URI for content negotiation
* CSS changes to prevent layout problems in admin pages
* Add selectable list of publication types on import

Resolves to https://jira.duraspace.org/browse/VIVO-1415
 2019-08-08 10:15:17 -04:00
Ralph O'Flinn
0a08c2890d VIVO-1614 - Update to allow the TPF API to be toggled via the runtime.properties. (#136) 
* Update to allow the TPF API to be toggled via the runtime.properties.

Resolves: https://jira.duraspace.org/browse/VIVO-1614
 2019-08-02 13:20:31 -04:00
Ben
87092cec9c [VIVO-1690] - Remove trailing whitespace throughout project (#126) 
* Remove trailing whitespace throughout project

Resolves: https://jira.duraspace.org/browse/VIVO-1690
** Along with: https://github.com/vivo-project/Vitro/pull/117
 2019-05-03 12:51:00 -04:00
Ben
ba2ee238ad [VIVO-1671] Restrict context node labels added to search index to relationships (#117) 
Resolves: https://jira.duraspace.org/browse/VIVO-1671

* Restrict context node labels added to search index to relationships
 2019-01-25 09:45:27 -05:00
Stefan-Wolff
7a963c2ef9 [VIVO-1528] annotate fields for HTML editing (#100) 
* annotate fields for HTML editing

Resolves: https://jira.duraspace.org/browse/VIVO-1528
 2018-12-07 09:15:25 -05:00
Laura Wrubel
9580863285 [VIVO-1340] Fix links to documentation in runtime.properties (#98) 
Resolves: https://jira.duraspace.org/browse/VIVO-1340
 2018-12-05 14:54:09 -05:00
Mike Conlon
1ffdf3e11c has collaborator is symmetric (#90) 
* has collaborator is reflexive

* has collaborator is symmetric
 2018-10-10 12:44:13 +03:00
Michael Conlon
31921e7de5 Use URI for ontology references, not prefixes 2018-09-28 13:35:35 -04:00
Michael Conlon
c855033000 Correct 10 broken prefixes 2018-09-28 13:35:35 -04:00
Michael Conlon
e06d5cc721 Remove 28 IAO_0000412 assertions from vivo classes 2018-08-02 10:10:28 -04:00
vivo-uab
0547725a48 [maven-scm-plugin] prepare development vivo-1.11.0-SNAPSHOT 2018-07-09 20:18:40 -04:00
vivo-uab
df0b4697a4 [maven-scm-plugin] prepare release vivo-1.10.0 2018-07-09 20:18:40 -04:00
Asimq
d5934d2e40 Added the argon2 parameters to example.runtime.properties [secure password hashing] (#70) 
* added argon2i parameters to example.runtime.properties
* fixed the style of the example.runtime.properties

Resolves: https://jira.duraspace.org/browse/VIVO-1448
 2018-05-23 13:45:57 -04:00
Mike Conlon
8c02817465 Adding rdfs:domains back for the 10 cases left from DataDomain.rdf file (#69) 
* Add domain foaf:Agent to vivo:overview
* Adding rdfs:domains back for the 10 cases left from DataDomain.rdf file.
 2018-05-23 08:42:57 -06:00
Graham Triggs
5ca0d3daff [VIVO-1470] Cross-platform improvements for Maven (#64) 2018-05-02 12:51:09 +03:00
Mike Conlon
e3c74c0cbb
Merge pull request #65 from awoods/vivo-1479 
Change project version from 2.0.0-SNAPSHOT to 1.10.0-SNAPSHOT
 2018-04-27 10:38:50 -04:00
Javed
3890131205
Merge pull request #63 from vivo-project/vivo-1447 
Replace ontology files with vivo.owl
 2018-04-26 12:23:31 -04:00
Michael Conlon
da68b7a628 List all ontologies with label and prefix 2018-04-25 11:52:36 -04:00
Andrew Woods
5991c8411d Change project version from 2.0.0-SNAPSHOT to 1.10.0-SNAPSHOT 
Resolves: https://jira.duraspace.org/browse/VIVO-1479
 2018-04-24 17:09:56 -04:00
hudajkhan
73c205ddf2
Merge pull request #59 from j2blake/feature/1408-java-rdf-namespaces 
VIVO-1408 java rdf namespaces
 2018-04-03 15:42:33 -04:00
Michael Conlon
25b60e824f Replace ontology files with vivo.owl 2018-03-11 14:25:01 -04:00
gneissone
7fe329b329 Add clarification to ORCID integration settings 2018-02-07 19:32:56 -07:00
Jim Blake
71dfb30530 VIVO-1408 Use prefix to simplify JAVA class URIs 2018-01-10 10:06:59 -05:00
gneissone
b3683f6178 Update Map of Science and ResearcherID descriptions 2017-11-15 09:03:53 -07:00
Graham Triggs
fa311788fe Update project version numbers 2017-10-20 15:02:41 +01:00
Graham Triggs
18e110e73e Update ORCID example config to API 2.0 2017-10-18 15:39:33 +01:00
Graham Triggs
43dea89dae Minor code improvements 2017-09-18 11:50:07 +01:00
Graham Triggs
2f45fc7178 Update versions for beta 2 release 2017-07-27 17:39:43 +01:00
Graham Triggs
ca6d629e2f [VIVO-1346] Updates to ORCiD client library integration (preparation for v2.0) 2017-07-27 17:33:43 +01:00