@prefix : <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationSetup#> .
@prefix rdfs:  <http://www.w3.org/2000/01/rdf-schema#> . 


#
# Specify the SearchIndexExcluders, DocumentModifiers and IndexingUriFinders for VIVO. 
# These are in addition to the ones specified for VIVO.
#

:vivoSearchExcluder_namespaceExcluder
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.exclusions.ExcludeBasedOnNamespace> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.exclusions.SearchIndexExcluder> ;
    :excludes
        "http://purl.obolibrary.org/obo/" .

# ------------------------------------

:uriFinder_forContextNodes
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.indexing.IndexingUriFinder> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.indexing.AdditionalURIsForContextNodes> .

:uriFinder_forVCards
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.indexing.IndexingUriFinder> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.indexing.AdditionalUrisForVCards> .

# ------------------------------------

:vivodocumentModifier_calculateParameters
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> .

:vivodocumentModifier_PreferredTitle
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Preferred title" ;
    :hasTargetField "ALLTEXT" ;
    :hasTargetField "ALLTEXTUNSTEMMED" ;
    :hasTargetField "PREFERRED_TITLE" ;
    :hasSparqlQuery """
        PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
        PREFIX obo: <http://purl.obolibrary.org/obo/>
		SELECT ?title 
		WHERE {
			?uri obo:ARG_2000028 ?card .
			?card a vcard:Individual .
			?card vcard:hasTitle ?titleHolder .
			?titleHolder vcard:title ?title .
		}
        """ .
    
:vivodocumentModifier_EmailAddress
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Email address" ;
    :hasTargetField "ALLTEXT" ;
    :hasTargetField "ALLTEXTUNSTEMMED" ;
    :hasSparqlQuery """
        PREFIX vcard: <http://www.w3.org/2006/vcard/ns#>
        PREFIX obo: <http://purl.obolibrary.org/obo/>
		SELECT ?email 
		WHERE {
			?uri obo:ARG_2000028 ?card .
			?card a vcard:Individual .
			?card vcard:hasEmail ?emailHolder .
			?emailHolder vcard:email ?email .
		}
        """ .
:vivodocumentModifier_NamesAcrossContextNodes
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Names of objects across context nodes" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/>
        PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?uri   core:relatedBy ?rel    .
            ?rel   rdf:type       ?type   .
            ?rel   core:relates   ?other  .
            ?other rdfs:label     ?rawresult .
            FILTER ( ?type IN ( core:Position, core:Authorship, core:Collaboration, core:Affiliation ) )
        }        
        """ .

:vivodocumentModifier_MembershipFields
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Add people to organization and vice versa." ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) 
        WHERE {              
            ?uri    rdf:type               foaf:Organization .
            ?role   core:roleContributesTo ?uri .
            ?person obo:RO_0000053         ?role .
            ?person rdfs:label             ?rawresult .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) 
        WHERE {              
            ?uri    rdf:type               foaf:Person .
            ?uri obo:RO_0000053 / core:roleContributesTo / rdfs:label ?rawresult .
        }
        """ .

:vivodocumentModifier_EducationFields
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Labels for a degree and the granting organization." ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?uri   core:relates ?deg    . 
            ?deg   rdf:type     core:AwardedDegree .           
            ?deg   rdfs:label   ?rawresult .
        }            
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?uri   core:relates ?deg    .
            ?deg   rdf:type     core:AwardedDegree .
            ?deg   core:assignedBy ?org .
            ?org   rdfs:label   ?rawresult .
        }
        """ .
        
:vivodocumentModifier_AdvisingFields
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Labels for people in an advising relationship." ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?uri   core:relatedBy ?rel    .
            ?rel   rdf:type       core:AdvisingRelationship   .
            ?rel   core:relates   ?other  .
            ?other rdfs:label     ?rawresult .
            FILTER( ?other != ?uri )
        }         
        """ .

:vivodocumentModifier_Grants_Projects_ForPerson
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Grants and projects for person" ;
    :hasTypeRestriction "http://xmlns.com/foaf/0.1/Person" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?grant   core:relates ?uri        .
            ?grant   rdf:type     core:Grant  . 
            ?grant   rdfs:label   ?rawresult  .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) WHERE {
            ?uri     obo:RO_0000053  ?role .
            ?role    obo:BFO_0000054 ?project .
            ?project rdf:type        core:Project .
            ?project rdfs:label      ?rawresult .
        }
        """ .
    
:vivodocumentModifier_People_Organizations_Projects_ForGrant
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "People, organizations, and projects for grant" ;
    :hasTypeRestriction "http://vivoweb.org/ontology/core#Grant" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) 
        WHERE {
            ?uri    core:relates ?person .             
            ?person rdf:type     foaf:Person .            
            ?person rdfs:label   ?rawresult .            
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) WHERE {
            ?uri  core:relates ?org .
            ?org  rdf:type     foaf:Organization .
            ?org  rdfs:label   ?rawresult .           
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) WHERE {
            ?uri     core:relates    ?role .
            ?role    obo:BFO_0000054 ?project .
            ?project rdf:type        core:Project .
            ?project rdfs:label      ?rawresult .
        }
        """ .

:vivodocumentModifier_Grants_People_ForProject
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Grants and people for project" ;
    :hasTypeRestriction "http://vivoweb.org/ontology/core#Project" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) WHERE {
            ?role  obo:BFO_0000054 ?uri .
            ?grant core:relates    ?role .
            ?grant rdf:type        core:Grant .
            ?grant rdfs:label      ?rawresult .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX foaf: <http://xmlns.com/foaf/0.1/> 
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        PREFIX obo: <http://purl.obolibrary.org/obo/>
        SELECT (str(?rawresult) as ?result) WHERE {
            ?role   obo:BFO_0000054 ?uri .
            ?role   obo:RO_0000053  ?person .
            ?person rdf:type        foaf:Person .
            ?person rdfs:label      ?rawresult .
        }
        """ .

:vivodocumentModifier_GrantsForOrganization
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Grants for organization" ;
    :hasTypeRestriction "http://xmlns.com/foaf/0.1/Organization" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> 
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#> 
        SELECT (str(?rawresult) as ?result) WHERE {
            ?grant core:relates ?uri              .
            ?grant rdf:type     core:Grant        .
            ?grant rdfs:label   ?rawresult        .
        }
        """ .

:vivodocumentModifier_InformationResources
    a   <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.SimpleSparqlQueryDocumentModifier> ,
        <java:edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.DocumentModifier> ;
    rdfs:label "Authors, featured, editors, and subject area for InformationResource" ;
    :hasTypeRestriction "http://purl.obolibrary.org/IAO_0000030" ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#>
        SELECT (str(?ContextNodeProperty) as ?contextNodeProperty) WHERE {
            ?uri core:relatedBy ?a .
            ?a rdf:type core:Authorship .
            ?a core:relates ?b .
            ?b rdf:type foaf:Agent .
            ?b rdfs:label ?ContextNodeProperty .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#>
        SELECT (str(?ContextNodeProperty) as ?contextNodeProperty) WHERE {
            ?uri core:features ?i . 
            ?i rdfs:label ?ContextNodeProperty .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#>
        SELECT (str(?ContextNodeProperty) as ?contextNodeProperty) WHERE {
            ?uri core:relatedBy ?e .
            ?e rdf:type core:Editorship  .
            ?e core:relates ?i  .
            ?i rdf:type foaf:Agent .
            ?i rdfs:label ?ContextNodeProperty  .
        }
        """ ;
    :hasSparqlQuery """
        PREFIX owl: <http://www.w3.org/2002/07/owl#>
        PREFIX vitroDisplay: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#>
        PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
        PREFIX core: <http://vivoweb.org/ontology/core#>
        PREFIX foaf: <http://xmlns.com/foaf/0.1/>
        PREFIX obo: <http://purl.obolibrary.org/>
        PREFIX rdfs:  <http://www.w3.org/2000/01/rdf-schema#>
        PREFIX localNav: <http://vitro.mannlib.cornell.edu/ns/localnav#>
        PREFIX bibo: <http://purl.org/ontology/bibo/>
        SELECT (str(?ContextNodeProperty) as ?contextNodeProperty) WHERE {
            ?uri core:hasSubjectArea ?f . 
            ?f rdfs:label ?ContextNodeProperty .
        }
        """ .