This replaces IndividualDao.getAllOfThisTypeIterator(). It returns the list that was created instead of
the iterator.
This would require a change to ObjectSourceIFace, but we get rid of it instead. Nobody was using it.
Use no-argument constructors, supplying data through the ContextModelsUser interface as needed.
Add toString() methods to IndexingUriFinders, DocumentModifiers and SearchIndexExcluders
Create a bridge implementation of SearchIndexerImpl that just wraps around an old IndexBuilder.
Modify client code:
Application, BasicAuthenticator, SearchServiceController, SparqlUpdateApiController,
UpdateUrisInIndex and VClassGroupCache
Rewrite IndexController to use AJAX and to show the current status and history of the indexer events.
Take out the attribute key in SearchIndexerSetup. Nobody ever sets that attribute.
Take out the VClassGroupCache.removeClassesHiddenFromSearch() method. If nobody sets that attribute, this method does nothing.
Take out VClassGroupDao.removeClassesHiddenFromSearch() and VClassGroupDaoJena.removeClassesHiddenFromSearch(). They are never called.
Take out ClassProhibitedFromSearch interface. It is implemented but never referenced.
Take out FileBasedProhibitedFromSearch. It is never used.
Move ProhibitedFromSearch and ProhibitedFromSearchTest from edu.cornell.mannlib.vitro.webapp.search.beans to edu.cornell.mannlib.vitro.webapp.dao.vclassgroup
There are still some differences between the two, and I expect some answers from Jon and Brian regarding irregularities in the ontologies.
The Pellet libraries have not yet been removed.
Before testing the password, test that the account is well-formed: first name, last name, email.
After testing the password, check to see whether a password change is required.
Because subclass/superclass is only a partial ordering, this breaks the contract for Comparator,
and throws an IllegalArgumentException under Java 8. In particular, for classes sub, super and other,
we have sub=other, sub<super, which should imply other<super, but instead other=super.
As far as I can determine, this sort is never used anyway, so there should be no impact in removing it.
PropertyInstanceDaoJena sorts these results again before using them, as does GroupedPropertyList.
Probably due to a change in the algorithm for HashMap, or something similar.
This test expected a particular string in response, but Java 7 and Java 8 returned two different, but equivalent, strings.
Modify it so it will accept @prefix or xmlns: specifications in any order.
Replace PelletListener with a TBoxReasonerModule in the Application.
The reasoner will be accessible only through here, not as a context attribute or through the WebappDaoFactory.
Split out the initialization of the TBox reasoner from SimpleReasonerSetup.
Break out the filtering of TBox changes into a ConfiguredReasonerListener.
Refactor the threading logic into a BasicTBoxReasonerDriver.
Add a factory for creating VitroBackgroundThreads in an Executor.
Isolate the actual reasoner into a TBoxReasoner implementation. In this case, PelletTBoxReasoner.
Combine the consistency flag, error flag, explanation, and running status into one TBoxReasonerStatus object.
Replace PelletListener with BasicTBoxReasonerDriver, and associated classes.
Run the background thread from an ExecutorService.
Since nobody was using the FOREGROUND flag, and since its logic was flawed, skip it.
Make TBoxReasonerModule a module on the Application. Make the reasoner status available through the module.
Initialize it in startup_listeners.txt
Create a concrete class for PelletTBoxReasonerModule, and configure it in applicationSetup.n3
Get rid of PelletReasonerSetup.
Make it so the ExecutorService in BasicTBoxReasonerDriver uses a VitroBackgroundThread.,
Make TBoxReasonerModule a module on the Application. Make the reasoner status available through the module.
Initialize it in startup_listeners.txt
Create a concrete class for PelletTBoxReasonerModule, and configure it in applicationSetup.n3
Get rid of PelletReasonerSetup.
Make it so the ExecutorService in BasicTBoxReasonerDriver uses a VitroBackgroundThread.,
