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Author SHA1 Message Date
9e5236c712 Document upload 2021-11-08 21:25:39 +01:00
e48b2d7e0f Split search services 2021-11-02 11:21:30 +01:00
cdcc051d3f fix: convert char codes on read/write property files 2021-10-21 15:07:55 +02:00
952ffa66ad fix: safe way to convert array of objects to array of strings 2021-10-21 13:35:42 +02:00
95d559712f fix: workaround for online translations using freemarker template models 2021-10-20 23:30:53 +02:00
9d4d29b653 merge delete controller 2021-10-14 18:37:23 +02:00
b6f0ed229c added online Translations 2021-10-14 18:35:58 +02:00
2519c4a6a7 Added custom search controller
Cleaned custom search controller

Autoselect hits per page from query.

Moved template change to VIVO branch
2021-10-14 15:04:05 +02:00
3c2e9cab05 Antisamy policy fixes
Allow table tags in TinyMCE
2021-10-14 15:03:30 +02:00
Dragan Ivanovic
bf7c6ffaf7 Update issue templates 2021-10-06 12:56:43 +02:00
Ralph O'Flinn
028af518f9
1.12.0-maint to main (#246)
* [maven-scm-plugin] prepare release vitro-1.12.0

* [maven-scm-plugin] prepare development vitro-1.12.1-SNAPSHOT-SNAPSHOT
2021-08-17 10:53:15 -05:00
Ralph O'Flinn
5a4648554a Merge branch 'rel-1.12.0-RC' into main 2021-07-21 07:20:21 -05:00
dependabot[bot]
b123f3bd9b
Bump junit from 4.11 to 4.13.1 in /api (#191)
Bumps [junit](https://github.com/junit-team/junit4) from 4.11 to 4.13.1.
- [Release notes](https://github.com/junit-team/junit4/releases)
- [Changelog](https://github.com/junit-team/junit4/blob/main/doc/ReleaseNotes4.11.md)
- [Commits](https://github.com/junit-team/junit4/compare/r4.11...r4.13.1)

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-06-25 00:14:23 -05:00
Brian Lowe
a7e1e60c7e
Update version numbers in pom.xmls (#239)
* Update version numbers in pom.xmls

* Restore -SNAPSHOT
2021-06-21 04:10:08 -05:00
9565fbd925
Merge pull request #232 from brianjlowe/issue/VIVO-1983
[VIVO-1983] Limit label management values to current locale
2021-06-17 23:33:44 +02:00
Brian Lowe
762388e88b Retrieve locales used in label statements instead of only selectable locales 2021-06-16 22:02:48 +03:00
1e7cc745bc
Merge pull request #236 from brianjlowe/issue/VIVO-1985
[VIVO-1985] Compare locales of equal rank alphabetically to provide consistent fallback
2021-06-16 20:16:39 +02:00
Brian Lowe
93fd5a5f39 Retrieve locales used in label statements instead of only selectable locales 2021-06-16 21:16:24 +03:00
Brian Lowe
33ae07dcbf Use language-neutral model to match data property statements to literal hashes. 2021-06-10 13:05:02 +03:00
Brian Lowe
20507a75fb Remove erroneous addition of language-awareness to request OntModels that failed to respect the specified language option. 2021-06-10 13:04:18 +03:00
Brian Lowe
1d89cbc908
Log ConfigurationProperties bean at DEBUG level. (#237) 2021-06-09 08:10:57 -06:00
Brian Lowe
1720272155
[VIVO-1997] Log blank node deletion messages at DEBUG instead of WARN (#238)
* Log blank node deletion messages at debug level instead of warn.

* Switch to more informative debug message about blank node deletion.
2021-06-09 08:10:12 -06:00
Brian Lowe
27353bfb91 Count labels and distinct languages using same query; revert changes to lib-properties.ftl. 2021-06-04 16:59:27 +03:00
d21dc92b0b
Use unique key in account activation link and reset password link (#234)
* Use unique key for email activation and password reset

* Renamed old variable from hash to key

* Check for null before setting email key for backward compatibility. Removed comment about old behaviour.

* Send password_change_invalid_key message instead of password_change_not_pending on key mismatch.
2021-06-03 15:59:29 +03:00
Brian Lowe
3c04cc0f80
Abort TDB write transaction before ending if not successfully committed (#230) 2021-06-02 09:55:23 -06:00
Ben
1819fa1dd4
Merge pull request #235 from brianjlowe/issue/VIVO-1989
[VIVO-1989] URL-encode vCard-related resource URIs appended to edit links
2021-06-02 09:30:30 -06:00
Brian Lowe
7a24e259e8 URL-encode vCard-related resource URIs appended to edit links 2021-06-01 15:45:48 +03:00
Brian Lowe
e7993668b6 Sort locales of the same priority level alphabetically for consistent selection of fallback language 2021-06-01 15:10:56 +03:00
Brian Lowe
63639fc852 Update view labels servlet to use current language filtering 2021-05-28 17:12:02 +03:00
Brian Lowe
c07af3d794 Count labels with language filtering 2021-05-28 15:51:06 +03:00
Ben
5075d78537
Update example config files to current best practices (#229) 2021-05-06 12:33:37 +03:00
Ben
bbead68e88
Merge pull request #220 from brianjlowe/issue/VIVO-1974
Add usePreciseSubqueries property to example.runtime.properties.  Hav…
2021-05-05 10:36:54 -06:00
Ben
71ca39d597
[VIVO-1736] - Bugfix for redirecting user to home page after login (#227)
* Add trailing slash to home page redirect if contextPath empty

* Add redirect path to debug log

* Remove outdated code comment
2021-05-03 20:03:17 +03:00
Ben
cd437a503e
Merge pull request #222 from brianjlowe/issue/VIVO-1615
Fix errors preventing TPF server from working with TDB. Resolve https…
2021-04-27 10:43:48 -06:00
Brian Lowe
0b9919c55d
Replace hardcoded en locale with current locale in lang and xml:lang attributes (#228) 2021-04-21 11:53:41 -05:00
Brian Lowe
3984203552
Implement nextBinding() method in FIlteredResultSet. (#215) 2021-04-21 10:14:31 -05:00
Ben
bc12d2037c
Merge pull request #224 from brianjlowe/issue/VIVO-1976
Move event listening to RDFServiceGraph level to avoid adding a new r…
2021-04-12 08:28:20 -06:00
Brian Lowe
b6062fe4a0 Add note to example.runtime.properties that TPF should not be used if Vitro contains restricted data. 2021-04-09 18:15:57 +03:00
Ben
b283a8342a
Add subject to reindex in AdditionalURIsForObjectProperties (#225)
Co-authored-by: Georgy Litvinov <git@litvinovg.pro>
2021-04-09 17:39:15 +03:00
Ben
ebca021bc4
Merge pull request #223 from brianjlowe/issues/VIVO-1973
Allow site admins to edit pages in page management. Resolve https://j
2021-04-09 07:47:57 -06:00
Ben
c5a716e90e
Merge pull request #226 from vivo-project/revert-221-bugfix/VIVO-1736
Revert "[VIVO-1736] - Bugfix for redirecting user to home page after login"
2021-04-06 11:25:11 -06:00
Brian Lowe
def81c9013 Revert "Bugfix for redirecting user to home page after login (#221)"
This reverts commit 2ad521e9da.
2021-04-06 20:21:51 +03:00
Brian Lowe
93bd5183e2 Move event listening to RDFServiceGraph level to avoid adding a new redundant listener each time a model is made for an existing RDFServiceGraph. Resolve https://jira.lyrasis.org/browse/VIVO-1976 2021-04-06 17:15:50 +03:00
Brian Lowe
70aefebedf Allow site admins to edit pages in page management. Resolve https://jira.lyrasis.org/browse/VIVO-1973 2021-04-06 14:36:30 +03:00
4ed88b81e3
Add subject to reindex in AdditionalURIsForObjectProperties (#216)
Resolve https://jira.lyrasis.org/browse/VIVO-1966
2021-04-06 13:23:21 +03:00
Brian Lowe
cdfb18a455 Fix errors preventing TPF server from working with TDB. Resolve https://jira.lyrasis.org/browse/VIVO-1615 2021-04-06 12:53:26 +03:00
Ben
2ad521e9da
Bugfix for redirecting user to home page after login (#221)
https://jira.lyrasis.org/browse/VIVO-1736
2021-04-06 11:44:53 +03:00
Brian Lowe
ff8ba8adcc Add usePreciseSubqueries property to example.runtime.properties. Have RDFServiceTDB report a preference for precise optionals as does SDB. 2021-03-29 16:17:37 +03:00
Ralph O'Flinn
eb61192d11
Revert "revert deployment changes (#217)" (#218)
This reverts commit e4e0a7d061.
2021-03-24 07:12:31 -05:00
Ralph O'Flinn
193b38159a
revert deployment changes (#219)
Co-authored-by: William Welling <wwelling@library.tamu.edu>
2021-03-24 01:47:08 -05:00
William Welling
e4e0a7d061
revert deployment changes (#217) 2021-03-22 20:42:45 +02:00
Brian Lowe
6b612316ee
Use same fallback locale used by RDFFilesLoader when setting locale on request. Resolves https://jira.lyrasis.org/browse/VIVO-1959 (#212) 2021-02-18 08:50:32 -06:00
Andrew Woods
eb949919b5
Sprint i18n with main (#209)
* Layer uqam updates onto master (minus trailing whitespace)

* Update RDFServiceFactorySingle.java

* Sprint i18n whitespace (#143)

* Removed extraneous whitespace
   - modified:   api/src/main/java/edu/cornell/mannlib/vitro/webapp/edit/n3editing/VTwo/BaseEditElementVTwo.java

* move RootUserPolicy.java from VIVO to Vitro repo.

* Remove blank line

* Fixed indentations

* Update whitespace for: TemplateProcessingHelper.java

* Update whitespace for: RDFServiceModel.java

* Removed extraneous whitespaces.

* Tagging UQAM Comments with following tags

-Add-Feature
-Optimization
-Linguistic-Management
-Bug-Correction

* Resolve compilation failures in Vitro tests

* Remove whitespace changes from SelectListGeneratorVTwo.java

* Add null check on field values of RDF Form (#158)

Resolves: https://jira.lyrasis.org/browse/VIVO-1800

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Fix incorrect tool-tip in language selection dropdown (#156)

Resolves: https://jira.lyrasis.org/browse/VIVO-1783

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Sprint i18n/lang filtering model (#159)

* Add language-aware graph filtering instead of layering on additional RDFService

Resolves: https://jira.lyrasis.org/browse/VIVO-1771

* Remove hardcoded link label (#161)

Resolves: https://jira.lyrasis.org/browse/VIVO-1779

* Enable filtering of non-enabled i18n language files from being loaded into triple store (#160)

Define name of available language listing file (found in Vitro-languages)
Update RDFFilesLoader method interfaces to include ServletContext

Part of resolution to: https://jira.lyrasis.org/browse/VIVO-1836

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Add i18n version of Edit page title (#157)

Related to: https://jira.lyrasis.org/browse/VIVO-1779

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Changing ontology extensions for n3 & assigning a base IRI to each (#163)

ontology

Co-authored-by: michelheon <heon@videotorn.ca>
Co-authored-by: Andrew Woods <awoods@duraspace.org>

https://jira.lyrasis.org/browse/VIVO-1862

* Update sprint-i18n with master branch (#166)

* Make data property richtext editor option selectable from UI

* [VIVO-1755] - Better error handling when reasoner disabled (#137)

* Better error handling when reasoner disabled

* Change reasoner error log message to debug

* Extend reasoner status error handling

* Improve reasoner error log message and extend to JenaAdminActions

* Bump up log level for admin action to 'warn' and edit admin panel error message

* Change Model writer lang from "N3-PP" to "N3" (#149)

Resolves: https://jira.lyrasis.org/browse/VIVO-1761

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* [VIVO-1851] - Add 'remove' option to named graph management page (#162)

* Add 'remove' option to named graph management page

Resolves: https://jira.lyrasis.org/browse/VIVO-1851

* [VIVO-1872] - Add download option to SPARQL Query page (#164)

* Add download option to SPARQL Query page

* Set SPARQL query results content type even if downloading

* Address pull request comments

Co-authored-by: gneissone <mbgross@wustl.edu>
Co-authored-by: Ralph O'Flinn <roflinn@users.noreply.github.com>
Co-authored-by: Andrew Woods <awoods@duraspace.org>

* [VIVO-1839] - Use language name for selector instead of flags (#165)

* Use language name for selector instead of flags
* Add country name to language selector
* Increase min-width of language dropdown
* Update data tree comment in languageSelector.ftl
* Min-width for language dropdown
* Language dropdown css adjustment
* Capitalize locale label
* Indent on languageSelector.ftl

Resolves: https://jira.lyrasis.org/browse/VIVO-1839

* Adds internationalization to the admin/sparql-query page (#167)

* Adds internationalization to the admin/sparql-query page

Partial resolution of: https://jira.lyrasis.org/browse/VIVO-1873

* Add i18n for 'save query result'

Related to: https://jira.lyrasis.org/browse/VIVO-1873

* code review

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* removed redundat files which are now available via Vitro- and VIVO-languages

* Making UQAM-optimization aware of https://

* Add parent reference to installer/pom.xml (#174)

Resolves: https://jira.lyrasis.org/browse/VIVO-1903

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Revert non-function RDF changes (#177)

Related to: https://jira.lyrasis.org/browse/VIVO-1905

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Ensure 'other' in Individual->Teaching->advisees->type is translated

Partial resolution to: https://jira.lyrasis.org/browse/VIVO-1881

* Re-add logic from commit 7420957

* [VIVO-1812] use i18n translation for validation messages (#179)

* replace constants with i18n text in BasicValidationVTwo
* use constants for i18n template key

Partial resolution of: https://jira.lyrasis.org/browse/VIVO-1812

* added js_string at i18n strings to handle quotes properly, ticket vivo-1842 (#180)

Partial resolution for: https://jira.lyrasis.org/browse/VIVO-1842

* [VIVO-1870] simplify and concat translation for browse by vclass (#182)

* simplify and concat translation for browse by vclass

Partial resolution of: https://jira.lyrasis.org/browse/VIVO-1870

* [VIVO-1900] i18n: added empty check for getCountry, fixing bug with spanish label (es) (#181)

* added empty check for getCountry, fixing bug with spanish label (es), ticket vivo-1900

Partial resolution to: https://jira.lyrasis.org/browse/VIVO-1900

* [VIVO 1870] update i18n key to JavaScript mapping (#183)

* update menupage-script i18n key to JavaScript mapping

Follow-on to resolution of: https://jira.lyrasis.org/browse/VIVO-1870

* [VIVO-1837] get i18n bundle from WebappDaoFactoryConfig preferred locales (#178)

* apply i18n text to VClassDaoJena.getLabelForClass
* expose i18n bundle through webapp dao factory interface
* use whole messages for i18n
* if request available use request bundle else use context bundle
* clear cache when context theme directory changes
* make getOverridingLocale from context private
* select locale based on preferred locale from webapp dao factory
* use first preferred local even when no selectable locales available on context
* build default preferred locales from default preferred languages

Resolves: https://jira.lyrasis.org/browse/VIVO-1837

* Ensure that "available langs" include base langs (#185)

Resolves: https://jira.lyrasis.org/browse/VIVO-1922

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Ensure I18nStub is initialized before pertinent tests (#186)

Resolves: https://jira.lyrasis.org/browse/VIVO-1923

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* add additional null checks to ensure context is ready for theme change (#187)

* [VIVO-1915] i18n - Adding a label with language tag through the "new" manageLabelsForindividualAddForm.ftl does not take the setting for language tag (#184)

* Fixed bug when addng a label with language tag through managLabelsForindividualAddForm, re ticket VIVO-1915

* removed the language select for managing multi language labels, ticket vivo-1915

* readded the fix for language selection because of the fr-CA version of the manageLabelsForIndividualftl, ticket vivo-1915

* removed earlier fix, removed comments, modified ManageLabelGenrator, ticket vivo-1915

Partial resolution to: https://jira.lyrasis.org/browse/VIVO-1915

* - replaced hard coded "or"s with i18n().or

* [VIVO-1925] i18n: Editing labels results in new label (#188)

* fixed bug: Editing language labels results in new label, ticket vivo-1925

Resolves: https://jira.lyrasis.org/browse/VIVO-1925

* Enable lang selection without need for 'available-langs.properties' (#169)

* Enable lang selection without need for 'available-langs.properties'
Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Reduce number of times QuerySolutions are looped in LanguageFilteringRDFService (#194)

- No functional change in this update

Resolves: https://jira.lyrasis.org/browse/VIVO-1931

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Prevent 'ProcessRdfForm.parseN3ToRDF' from using null linguisticContext (#197)

Resolves: https://jira.lyrasis.org/browse/VIVO-1944

Co-authored-by: Andrew Woods <awoods@duraspace.org>

* [Vivo 1918] i18n: Reload firsttime files on start-up if changed (#195)

Co-authored-by: Andrew Woods <awoods@lyrasis.org>

* [VIVO-1936] i18n: updated the language comment in runtime.properties

* ftl function to capitalize group name affording override

* Further i18n for BasicValidationVTwo.java

* Fixed DeletePropertyController.java - getting localname of property properly (#200)

* Fixed DeletePropertyController.java - getting localname of property properly

Resolves: https://jira.lyrasis.org/browse/VIVO-1816

* Removed hardcoded time units by properties calls in dateTimeWithPrecision.ftl

* Use i18n values for date time form (#204)

Resolves: https://jira.lyrasis.org/browse/VIVO-1953

* VIVO-1929: patch authorizing create individual form (#206)

* patch authorizing create individual form

Resolves: https://jira.lyrasis.org/browse/VIVO-1929

* Issue/vivo 1947 (#205)

* Make data property richtext editor option selectable from UI
* Better error handling when reasoner disabled
* Change reasoner error log message to debug
* Extend reasoner status error handling
* Improve reasoner error log message and extend to JenaAdminActions
* Bump up log level for admin action to 'warn' and edit admin panel error message
* Change Model writer lang from "N3-PP" to "N3" (#149)
* Prevent ontology editor and N3 editing from deleting property values in languages other than the one associated with the editing request. [https://jira.lyrasis.org/browse/VIVO-1947]

Resolves: https://jira.lyrasis.org/browse/VIVO-1947

Co-authored-by: gneissone <mbgross@wustl.edu>
Co-authored-by: Ralph O'Flinn <roflinn@users.noreply.github.com>
Co-authored-by: Andrew Woods <awoods@lyrasis.org>
Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Remove comments

Co-authored-by: Andrew Woods <awoods@duraspace.org>
Co-authored-by: Nicolas D <46490666+nicalico@users.noreply.github.com>
Co-authored-by: VIVO UQAM <62542918+UQAM-VIVO@users.noreply.github.com>
Co-authored-by: Matthias Luehr <luehr@hs-mittweida.de>
Co-authored-by: michelheonuqam <heon.michel@uqam.ca>
Co-authored-by: Brian Lowe <brianjlowe@gmail.com>
Co-authored-by: j-dornbusch <joachim.dornbusch@ehess.fr>
Co-authored-by: Michel Heon <heon@videotron.ca>
Co-authored-by: gneissone <mbgross@wustl.edu>
Co-authored-by: Ralph O'Flinn <roflinn@users.noreply.github.com>
Co-authored-by: dofeldsc <dofeldsc@uos.de>
Co-authored-by: root <root@vivo-development.hs-mittweida.de>
Co-authored-by: gneissone <mbgross@unavco.org>
Co-authored-by: William Welling <wwelling@library.tamu.edu>
Co-authored-by: Kampe <Benjamin.Kampe@tib.eu>
Co-authored-by: Gross, Benjamin <benjamin.gross@clarivate.com>
Co-authored-by: matthiasluehr <60263380+matthiasluehr@users.noreply.github.com>
Co-authored-by: nicolasdickner <dickner.nicolas@uqam.ca>
2021-02-10 11:04:01 -06:00
William Welling
28188e9719
VIVO-1960: GitHub Actions Continued (#211)
* run tests during CI build
* build CI use java 11

Follow-on to: https://jira.lyrasis.org/browse/VIVO-1960
2021-02-09 17:45:53 -05:00
William Welling
06d9f5d333
VIVO-1960: GitHub Build Action (#210)
* add build workflow
* remove travis
* update readme badge

Partially resolves: https://jira.lyrasis.org/browse/VIVO-1960
2021-02-09 15:01:47 -05:00
Andrew Woods
8b9a7484b3
Create vivo/home on application start-up (#192)
* Create vivo/home on application start-up

- Add logic for untarring vivo-home

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* Require runtime.properties and applicationSetup.n3 be in 'config/' dir

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* Support loading config files with or without 'default' prefix
* Prioritize without the prefix

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* Add leading slash to location of vivo-home.tar resource path
* This allows for deployment in both Tomcat and Jetty

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* Ensure VIVO_HOME is populated whether it is empty or not

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* Require common properties to be in JNDI

Properties include:
- vitro/home
- vitro/appName
- vitro/rootUserAddress
- vitro/defaultNamespace

Related to: https://jira.lyrasis.org/browse/VIVO-1443

* VIVO-1443: non destructive vivo home untarring (#2)

* Upgrade Jena version to 3.16.0 (#196)

Related to: https://jira.lyrasis.org/browse/VIVO-1943

* remove example-settings.xml
* update home directory untar non-destructive
* checksum digest to retain modified files
* compare checksum from digest with existing file
* overwrite files that have not changed
* add command to manually generate checksum digest
* simplify parsing checksum digest using pattern

Co-authored-by: Andrew Woods <awoods@lyrasis.org>
Co-authored-by: Andrew Woods <awoods@duraspace.org>

* not overwrite existing file if same as tar entry (#3)

* Upgrade Jena version to 3.16.0 (#196)

Related to: https://jira.lyrasis.org/browse/VIVO-1943

* remove example-settings.xml
* update home directory untar non-destructive
* checksum digest to retain modified files
* compare checksum from digest with existing file
* overwrite files that have not changed
* add command to manually generate checksum digest
* simplify parsing checksum digest using pattern
* do not overwrite file if same as already exists

Co-authored-by: Andrew Woods <awoods@lyrasis.org>
Co-authored-by: Andrew Woods <awoods@duraspace.org>

* Update log messages for clarity

Co-authored-by: Andrew Woods <awoods@duraspace.org>
Co-authored-by: William Welling <wwelling@library.tamu.edu>
Co-authored-by: Gross, Benjamin <benjamin.gross@clarivate.com>
2021-02-05 10:58:37 -06:00
Andrew Woods
936305be2a
Upgrade Jena version to 3.16.0 (#196)
Related to: https://jira.lyrasis.org/browse/VIVO-1943

Co-authored-by: Andrew Woods <awoods@duraspace.org>
2020-12-03 07:56:29 -06:00
Ben
119413413a
Adjust SPARQL node logic to add datatypes to literals only if lacking a language tag (#175) 2020-07-21 17:01:39 +03:00
265 changed files with 13043 additions and 2561 deletions

34
.github/ISSUE_TEMPLATE/bug_report.md vendored Normal file
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---
name: Bug report
about: Create a report to help us improve
title: ''
labels: ''
assignees: ''
---
**Describe the bug**
A clear and concise description of what the bug is.
**To Reproduce**
Steps to reproduce the behavior:
1. Go to '...'
2. Click on '....'
3. Scroll down to '....'
4. See error
**Expected behavior**
A clear and concise description of what you expected to happen.
**Screenshots**
If applicable, add screenshots to help explain your problem.
**Desktop (please complete the following information):**
- OS: [e.g. Windows, Linux]
- Browser [e.g. chrome, safari]
- Tomcat version [e.g. 8, 9]
- VIVO version [e.g. 1.11.0, 1.12.0]
- Apache Solr or ElasticSearch version
**Additional context**
Add any other context about the problem here.

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@ -0,0 +1,20 @@
---
name: Feature request
about: Suggest an idea for this project
title: ''
labels: ''
assignees: ''
---
**Is your feature request related to a problem? Please describe.**
A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
**Describe the solution you'd like**
A clear and concise description of what you want to happen.
**Describe alternatives you've considered**
A clear and concise description of any alternative solutions or features you've considered.
**Additional context**
Add any other context or screenshots about the feature request here.

28
.github/workflows/build.yml vendored Normal file
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@ -0,0 +1,28 @@
name: Build
on: [ push, pull_request, workflow_dispatch ]
jobs:
build:
runs-on: ubuntu-latest
env:
MAVEN_OPTS: -Xmx1024M
steps:
- uses: actions/checkout@v2
- name: Maven Cache
uses: actions/cache@v2
with:
path: ~/.m2/repository
key: ${{ runner.os }}-cache-m2-${{ hashFiles('**/pom.xml') }}
restore-keys: ${{ runner.os }}-cache-m2-
- name: Setup Java
uses: actions/setup-java@v1
with:
java-version: 11
- name: Maven Build
run: mvn clean install

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@ -1,22 +0,0 @@
language: java
dist: trusty
sudo: false
jdk:
- openjdk8
- oraclejdk8
env:
# Give Maven 1GB of memory to work with
- MAVEN_OPTS=-Xmx1024M
cache:
directories:
- .autoconf
- $HOME/.m2
install:
- "echo 'Skipping install stage, dependencies will be downloaded during build and test stages.'"
script:
- "mvn clean package -Dmaven.test.skip=false"

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@ -1,6 +1,6 @@
# What is Vitro?
[![Build Status](https://travis-ci.org/vivo-project/Vitro.png?branch=develop)](https://travis-ci.org/vivo-project/Vitro)
[![Build](https://github.com/vivo-project/Vitro/workflows/Build/badge.svg)](https://github.com/vivo-project/Vitro/actions?query=workflow%3ABuild)
Vitro is a general-purpose web-based ontology and instance editor with customizable public browsing.

View file

@ -7,13 +7,13 @@
<groupId>org.vivoweb</groupId>
<artifactId>vitro-api</artifactId>
<version>1.11.2-SNAPSHOT</version>
<version>1.12.1-SNAPSHOT</version>
<packaging>jar</packaging>
<parent>
<groupId>org.vivoweb</groupId>
<artifactId>vitro-project</artifactId>
<version>1.11.2-SNAPSHOT</version>
<version>1.12.1-SNAPSHOT</version>
<relativePath>..</relativePath>
</parent>
@ -66,7 +66,7 @@
<dependency>
<groupId>org.vivoweb</groupId>
<artifactId>vitro-dependencies</artifactId>
<version>1.11.2-SNAPSHOT</version>
<version>1.12.1-SNAPSHOT</version>
<type>pom</type>
</dependency>
<dependency>
@ -85,7 +85,7 @@
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.11</version>
<version>4.13.1</version>
<scope>test</scope>
</dependency>
<dependency>

View file

@ -62,6 +62,7 @@ public class ApplicationSetup implements ServletContextListener {
private void locateApplicationConfigFile() {
Path path = this.vitroHomeDir.getPath().resolve(APPLICATION_SETUP_PATH);
if (!Files.exists(path)) {
throw new IllegalStateException("'" + path + "' does not exist.");
}

View file

@ -37,7 +37,14 @@ public class RootUserPolicy implements PolicyIface {
private static final Log log = LogFactory.getLog(RootUserPolicy.class);
private static final String PROPERTY_ROOT_USER_EMAIL = "rootUser.emailAddress";
/*
* UQAM Add-Feature For parameterization of rootUser
*/
private static final String PROPERTY_ROOT_USER_PASSWORD = "rootUser.password";
private static final String PROPERTY_ROOT_USER_PASSWORD_CHANGE_REQUIRED = "rootUser.passwordChangeRequired";
private static final String ROOT_USER_INITIAL_PASSWORD = "rootPassword";
private static final String ROOT_USER_INITIAL_PASSWORD_CHANGE_REQUIRED = "true";
/**
* This is the entire policy. If you are a root user, you are authorized.
@ -150,10 +157,12 @@ public class RootUserPolicy implements PolicyIface {
ua.setEmailAddress(configuredRootUser);
ua.setFirstName("root");
ua.setLastName("user");
// UQAM Add-Feature using getRootPasswordFromConfig()
ua.setArgon2Password(Authenticator.applyArgon2iEncoding(
ROOT_USER_INITIAL_PASSWORD));
getRootPasswordFromConfig()));
ua.setMd5Password("");
ua.setPasswordChangeRequired(true);
// UQAM Add-Feature using getRootPasswdChangeRequiredFromConfig()
ua.setPasswordChangeRequired(getRootPasswdChangeRequiredFromConfig().booleanValue());
ua.setStatus(Status.ACTIVE);
ua.setRootUser(true);
@ -191,7 +200,31 @@ public class RootUserPolicy implements PolicyIface {
ss.warning(this, "For security, "
+ "it is best to delete unneeded root user accounts.");
}
/*
* UQAM Add-Feature
* Add for getting rootUser.password property value from runtime.properties
*/
private String getRootPasswordFromConfig() {
String passwd = ConfigurationProperties.getBean(ctx).getProperty(
PROPERTY_ROOT_USER_PASSWORD);
if (passwd == null) {
passwd = ROOT_USER_INITIAL_PASSWORD;
}
return passwd;
}
/*
* UQAM Add-Feature
* Add for getting rootUser.passwordChangeRequired property value from runtime.properties
*/
private Boolean getRootPasswdChangeRequiredFromConfig() {
String passwdCR = ConfigurationProperties.getBean(ctx).getProperty(
PROPERTY_ROOT_USER_PASSWORD_CHANGE_REQUIRED);
if (passwdCR == null) {
passwdCR = ROOT_USER_INITIAL_PASSWORD_CHANGE_REQUIRED;
}
return new Boolean(passwdCR);
}
@Override
public void contextDestroyed(ServletContextEvent sce) {
// Nothing to destroy

View file

@ -20,6 +20,7 @@ public class ApplicationBean {
public final static int VIVO_SEARCHBOX_SIZE = 20;
private final static String DEFAULT_APPLICATION_NAME = "Vitro";
private final static String DEFAULT_APPLICATION_AVAILABLE_LANGS_FILE = "available-langs";
private final static String DEFAULT_ROOT_LOGOTYPE_IMAGE = "";
private final static int DEFAULT_ROOT_LOGOTYPE_WIDTH = 0;
private final static int DEFAULT_ROOT_LOGOTYPE_HEIGHT = 0;
@ -33,6 +34,7 @@ public class ApplicationBean {
private boolean initialized = false;
private String sessionIdStr = null;
private String applicationName = DEFAULT_APPLICATION_NAME;
private String availableLangsFile = DEFAULT_APPLICATION_AVAILABLE_LANGS_FILE;
private String rootLogotypeImage = DEFAULT_ROOT_LOGOTYPE_IMAGE;
private int rootLogotypeWidth = DEFAULT_ROOT_LOGOTYPE_WIDTH;
@ -52,6 +54,7 @@ public class ApplicationBean {
output += " initialized from DB: [" + initialized + "]\n";
output += " session id: [" + sessionIdStr + "]\n";
output += " application name: [" + applicationName + "]\n";
output += " available langs file: [" + availableLangsFile + "]\n";
output += " root logotype image: [" + rootLogotypeImage + "]\n";
output += " root logotype width: [" + rootLogotypeWidth + "]\n";
output += " root logotype height: [" + rootLogotypeHeight + "]\n";
@ -177,6 +180,10 @@ public class ApplicationBean {
return "";
}
public String getAvailableLangsFile() {
return availableLangsFile;
}
/**
* Directory to find the images. Subdirectories include css, jsp and site_icons.
* Example: "themes/enhanced/"

View file

@ -7,17 +7,11 @@ import java.util.Collections;
import java.util.HashSet;
import java.util.Set;
import edu.cornell.mannlib.vitro.webapp.controller.authenticate.Authenticator;
import org.apache.commons.lang3.RandomStringUtils;
/**
* Information about the account of a user. URI, email, password, etc.
*
* The "password link expires hash" is just a string that is derived from the
* value in the passwordLinkExpires field. It doesn't have to be a hash, and
* there is no need for it to be cryptographic, but it seems embarrassing to
* just send the value as a clear string. There is no real need for security
* here, except that a brute force attack would allow someone to change the
* password on an account that they know has a password change pending.
*/
public class UserAccount {
public static final int MIN_PASSWORD_LENGTH = 6;
@ -52,6 +46,7 @@ public class UserAccount {
private String md5Password = ""; // Never null.
private String oldPassword = ""; // Never null.
private long passwordLinkExpires = 0L; // Never negative.
private String emailKey = "";
private boolean passwordChangeRequired = false;
private int loginCount = 0; // Never negative.
@ -133,15 +128,27 @@ public class UserAccount {
return passwordLinkExpires;
}
public String getPasswordLinkExpiresHash() {
return limitStringLength(8, Authenticator.applyArgon2iEncoding(String
.valueOf(passwordLinkExpires)));
}
public void setPasswordLinkExpires(long passwordLinkExpires) {
this.passwordLinkExpires = Math.max(0, passwordLinkExpires);
}
public void generateEmailKey() {
boolean useLetters = true;
boolean useNumbers = true;
int length = 64;
emailKey = RandomStringUtils.random(length, useLetters, useNumbers);
}
public void setEmailKey(String emailKey) {
if (emailKey != null) {
this.emailKey = emailKey;
}
}
public String getEmailKey() {
return emailKey;
}
public boolean isPasswordChangeRequired() {
return passwordChangeRequired;
}
@ -247,6 +254,7 @@ public class UserAccount {
+ (", oldPassword=" + oldPassword)
+ (", argon2password=" + argon2Password)
+ (", passwordLinkExpires=" + passwordLinkExpires)
+ (", emailKey =" + emailKey)
+ (", passwordChangeRequired=" + passwordChangeRequired)
+ (", externalAuthOnly=" + externalAuthOnly)
+ (", loginCount=" + loginCount) + (", status=" + status)

View file

@ -109,7 +109,7 @@ public abstract class ConfigurationProperties {
throw new NullPointerException("bean may not be null.");
}
context.setAttribute(ATTRIBUTE_NAME, bean);
log.info(bean);
log.debug(bean);
}
/** Package access, so unit tests can call it. */

View file

@ -73,7 +73,7 @@ public class ConfigurationPropertiesSetup implements ServletContextListener {
vitroHomeDir, vitroHomeDirConfig);
File runtimePropertiesFile = locateRuntimePropertiesFile(
vitroHomeDir, vitroHomeDirConfig, ss);
vitroHomeDir, vitroHomeDirConfig, ss);
stream = new FileInputStream(runtimePropertiesFile);
Map<String, String> preempts = createPreemptiveProperties(
@ -118,7 +118,6 @@ public class ConfigurationPropertiesSetup implements ServletContextListener {
}
}
private File locateRuntimePropertiesFile(File vitroHomeDir,
File vitroHomeDirConfig, StartupStatus ss) {

View file

@ -249,6 +249,7 @@ public class UserAccountsSelector {
user.setMd5Password(ifLiteralPresent(solution, "md5pwd", ""));
user.setArgon2Password(ifLiteralPresent(solution, "a2pwd", ""));
user.setPasswordLinkExpires(ifLongPresent(solution, "expire", 0L));
user.setEmailKey(ifLiteralPresent(solution, "emailKey", ""));
user.setLoginCount(ifIntPresent(solution, "count", 0));
user.setLastLoginTime(ifLongPresent(solution, "lastLogin", 0));
user.setStatus(parseStatus(solution, "status", null));

View file

@ -156,6 +156,7 @@ public class UserAccountsAddPage extends UserAccountsPage {
u.setOldPassword("");
u.setPasswordChangeRequired(false);
u.setPasswordLinkExpires(0);
u.setEmailKey("");
u.setLoginCount(0);
u.setLastLoginTime(0L);
u.setStatus(Status.INACTIVE);

View file

@ -84,6 +84,7 @@ public abstract class UserAccountsAddPageStrategy extends UserAccountsPage {
u.setStatus(Status.ACTIVE);
} else {
u.setPasswordLinkExpires(figureExpirationDate().getTime());
u.generateEmailKey();
u.setStatus(Status.INACTIVE);
}
}
@ -119,10 +120,8 @@ public abstract class UserAccountsAddPageStrategy extends UserAccountsPage {
private String buildCreatePasswordLink() {
try {
String email = page.getAddedAccount().getEmailAddress();
String hash = page.getAddedAccount()
.getPasswordLinkExpiresHash();
String relativeUrl = UrlBuilder.getUrl(CREATE_PASSWORD_URL,
"user", email, "key", hash);
String key = page.getAddedAccount().getEmailKey();
String relativeUrl = UrlBuilder.getUrl(CREATE_PASSWORD_URL, "user", email, "key", key);
URL context = new URL(vreq.getRequestURL().toString());
URL url = new URL(context, relativeUrl);

View file

@ -274,6 +274,7 @@ public class UserAccountsEditPage extends UserAccountsPage {
userAccount.setOldPassword("");
userAccount.setPasswordChangeRequired(false);
userAccount.setPasswordLinkExpires(0L);
userAccount.setEmailKey("");
}
if (isRootUser()) {

View file

@ -82,6 +82,7 @@ public abstract class UserAccountsEditPageStrategy extends UserAccountsPage {
protected void setAdditionalProperties(UserAccount u) {
if (resetPassword && !page.isExternalAuthOnly()) {
u.setPasswordLinkExpires(figureExpirationDate().getTime());
u.generateEmailKey();
}
}
@ -121,10 +122,8 @@ public abstract class UserAccountsEditPageStrategy extends UserAccountsPage {
private String buildResetPasswordLink() {
try {
String email = page.getUpdatedAccount().getEmailAddress();
String hash = page.getUpdatedAccount()
.getPasswordLinkExpiresHash();
String relativeUrl = UrlBuilder.getUrl(RESET_PASSWORD_URL,
"user", email, "key", hash);
String key = page.getUpdatedAccount().getEmailKey();
String relativeUrl = UrlBuilder.getUrl(RESET_PASSWORD_URL, "user", email, "key", key);
URL context = new URL(vreq.getRequestURL().toString());
URL url = new URL(context, relativeUrl);

View file

@ -36,6 +36,7 @@ public class UserAccountsCreatePasswordPage extends
userAccount.setArgon2Password(Authenticator.applyArgon2iEncoding(newPassword));
userAccount.setMd5Password("");
userAccount.setPasswordLinkExpires(0L);
userAccount.setEmailKey("");
userAccount.setPasswordChangeRequired(false);
userAccount.setStatus(Status.ACTIVE);
userAccountsDao.updateUserAccount(userAccount);
@ -53,6 +54,11 @@ public class UserAccountsCreatePasswordPage extends
protected String passwordChangeNotPendingMessage() {
return i18n.text("account_already_activated", userEmail);
}
@Override
protected String passwordChangeInavlidKeyMessage() {
return i18n.text("password_change_invalid_key", userEmail);
}
@Override
protected String templateName() {

View file

@ -195,6 +195,7 @@ public class UserAccountsFirstTimeExternalPage extends UserAccountsPage {
u.setExternalAuthId(externalAuthId);
u.setPasswordChangeRequired(false);
u.setPasswordLinkExpires(0);
u.setEmailKey("");
u.setExternalAuthOnly(true);
u.setLoginCount(0);
u.setStatus(Status.ACTIVE);

View file

@ -159,6 +159,7 @@ public abstract class UserAccountsMyAccountPageStrategy extends
userAccount.setMd5Password("");
userAccount.setPasswordChangeRequired(false);
userAccount.setPasswordLinkExpires(0L);
userAccount.setEmailKey("");
}
}

View file

@ -103,12 +103,12 @@ public abstract class UserAccountsPasswordBasePage extends UserAccountsPage {
return;
}
String expectedKey = userAccount.getPasswordLinkExpiresHash();
if (!key.equals(expectedKey)) {
String expectedKey = userAccount.getEmailKey();
if (key.isEmpty() || !key.equals(expectedKey)) {
log.warn("Password request for '" + userEmail + "' is bogus: key ("
+ key + ") doesn't match expected key (" + expectedKey
+ ")");
bogusMessage = passwordChangeNotPendingMessage();
bogusMessage = passwordChangeInavlidKeyMessage();
return;
}
@ -153,7 +153,7 @@ public abstract class UserAccountsPasswordBasePage extends UserAccountsPage {
body.put("minimumLength", UserAccount.MIN_PASSWORD_LENGTH);
body.put("maximumLength", UserAccount.MAX_PASSWORD_LENGTH);
body.put("userAccount", userAccount);
body.put("key", userAccount.getPasswordLinkExpiresHash());
body.put("key", userAccount.getEmailKey());
body.put("newPassword", newPassword);
body.put("confirmPassword", confirmPassword);
body.put("formUrls", buildUrlsMap());
@ -176,6 +176,8 @@ public abstract class UserAccountsPasswordBasePage extends UserAccountsPage {
protected abstract String alreadyLoggedInMessage(String currentUserEmail);
protected abstract String passwordChangeNotPendingMessage();
protected abstract String passwordChangeInavlidKeyMessage();
protected abstract String templateName();
}

View file

@ -55,6 +55,11 @@ public class UserAccountsResetPasswordPage extends UserAccountsPasswordBasePage
protected String passwordChangeNotPendingMessage() {
return i18n.text("password_change_not_pending", userEmail);
}
@Override
protected String passwordChangeInavlidKeyMessage() {
return i18n.text("password_change_invalid_key", userEmail);
}
@Override
protected String templateName() {

View file

@ -17,6 +17,8 @@ import javax.servlet.annotation.WebServlet;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -75,8 +77,8 @@ public class SparqlQueryController extends FreemarkerHttpServlet {
private static final String[] SAMPLE_QUERY = { //
"", //
"#", //
"# This example query gets 20 geographic locations", //
"# and (if available) their labels", //
"i18n:sparql_query_description_0", //
"i18n:sparql_query_description_1", //
"#", //
"SELECT ?geoLocation ?label", //
"WHERE", //
@ -193,9 +195,11 @@ public class SparqlQueryController extends FreemarkerHttpServlet {
@Override
protected ResponseValues processRequest(VitroRequest vreq) throws Exception {
I18nBundle i18n = I18n.bundle(vreq);
Map<String, Object> bodyMap = new HashMap<>();
bodyMap.put("sampleQuery", buildSampleQuery(buildPrefixList(vreq)));
bodyMap.put("title", "SPARQL Query");
bodyMap.put("sampleQuery", buildSampleQuery(i18n, buildPrefixList(vreq)));
bodyMap.put("title", i18n.text("sparql_query_title"));
bodyMap.put("submitUrl", UrlBuilder.getUrl("admin/sparqlquery"));
return new TemplateResponseValues(TEMPLATE_NAME, bodyMap);
}
@ -222,7 +226,7 @@ public class SparqlQueryController extends FreemarkerHttpServlet {
return prefixList;
}
private String buildSampleQuery(List<Prefix> prefixList) {
private String buildSampleQuery(I18nBundle i18n, List<Prefix> prefixList) {
StringWriter sw = new StringWriter();
PrintWriter writer = new PrintWriter(sw);
@ -230,6 +234,10 @@ public class SparqlQueryController extends FreemarkerHttpServlet {
writer.println(p);
}
for (String line : SAMPLE_QUERY) {
if (line.startsWith("i18n:")) {
// Get i18n translation
line = i18n.text(line.substring("i18n:".length()));
}
writer.println(line);
}

View file

@ -134,6 +134,7 @@ public class BasicAuthenticator extends Authenticator {
userAccount.setMd5Password("");
userAccount.setPasswordChangeRequired(false);
userAccount.setPasswordLinkExpires(0L);
userAccount.setEmailKey("");
getUserAccountsDao().updateUserAccount(userAccount);
}

View file

@ -108,7 +108,9 @@ public class LoginRedirector {
throws IOException {
try {
DisplayMessage.setMessage(request, assembleWelcomeMessage());
response.sendRedirect(getRedirectionUriForLoggedInUser());
String redirectUrl = getRedirectionUriForLoggedInUser();
log.debug("Sending redirect to path: " + redirectUrl);
response.sendRedirect(redirectUrl);
} catch (IOException e) {
log.debug("Problem with re-direction", e);
response.sendRedirect(getApplicationHomePageUrl());
@ -175,21 +177,13 @@ public class LoginRedirector {
}
}
/**
* The application home page can be overridden by an attribute in the
* ServletContext. Further, it can either be an absolute URL, or it can be
* relative to the application. Weird.
*/
private String getApplicationHomePageUrl() {
String contextRedirect = (String) session.getServletContext()
.getAttribute("postLoginRequest");
if (contextRedirect != null) {
if (contextRedirect.indexOf(":") == -1) {
return request.getContextPath() + contextRedirect;
} else {
return contextRedirect;
}
String contextPath = request.getContextPath();
if (contextPath.equals("")) {
return "/";
}
else {
return contextPath;
}
return request.getContextPath();
}
}

View file

@ -43,7 +43,7 @@ public class Classes2ClassesRetryController extends BaseEditController {
action = epo.getAction();
}
VClassDao vcDao = ModelAccess.on(getServletContext()).getWebappDaoFactory().getVClassDao();
VClassDao vcDao = ModelAccess.on(request).getWebappDaoFactory().getVClassDao();
epo.setDataAccessObject(vcDao);
Classes2Classes objectForEditing = new Classes2Classes();

View file

@ -51,8 +51,7 @@ public class ClassgroupRetryController extends BaseEditController {
action = epo.getAction();
}
VClassGroupDao cgDao = ModelAccess.on(
getServletContext()).getWebappDaoFactory().getVClassGroupDao();
VClassGroupDao cgDao = ModelAccess.on(request).getWebappDaoFactory().getVClassGroupDao();
epo.setDataAccessObject(cgDao);

View file

@ -50,11 +50,12 @@ public class DatapropRetryController extends BaseEditController {
//create an EditProcessObject for this and put it in the session
EditProcessObject epo = super.createEpo(request);
epo.setImplementationClass(DataProperty.class);
epo.setBeanClass(DataProperty.class);
VitroRequest vreq = new VitroRequest(request);
WebappDaoFactory wadf = ModelAccess.on(getServletContext()).getWebappDaoFactory();
WebappDaoFactory wadf = ModelAccess.on(vreq).getWebappDaoFactory();
DatatypeDao dDao = wadf.getDatatypeDao();
DataPropertyDao dpDao = wadf.getDataPropertyDao();

View file

@ -106,7 +106,7 @@ public class FauxPropertyRetryController extends BaseEditController {
this.epo = epo;
this.fpDao = ModelAccess.on(ctx).getWebappDaoFactory()
this.fpDao = ModelAccess.on(req).getWebappDaoFactory()
.getFauxPropertyDao();
}
@ -114,6 +114,8 @@ public class FauxPropertyRetryController extends BaseEditController {
void populate() {
epo.setDataAccessObject(fpDao);
epo.setAction(determineAction());
epo.setImplementationClass(FauxProperty.class);
epo.setBeanClass(FauxProperty.class);
if (epo.getUseRecycledBean()) {
beanForEditing = (FauxProperty) epo.getNewBean();

View file

@ -71,7 +71,7 @@ public class NamespacePrefixOperationController extends BaseEditController {
if (request.getParameter("_cancel") == null) {
OntModel ontModel = ModelAccess.on(getServletContext()).getOntModel();
OntModel ontModel = ModelAccess.on(req).getOntModel();
String namespaceStr = request.getParameter("namespace");
String prefixStr = request.getParameter("prefix");

View file

@ -51,7 +51,7 @@ public class PropertyGroupRetryController extends BaseEditController {
}
PropertyGroupDao pgDao = ModelAccess.on(
getServletContext()).getWebappDaoFactory().getPropertyGroupDao();
req).getWebappDaoFactory().getPropertyGroupDao();
epo.setDataAccessObject(pgDao);

View file

@ -53,6 +53,7 @@ public class PropertyRetryController extends BaseEditController {
/*for testing*/
ObjectProperty testMask = new ObjectProperty();
epo.setImplementationClass(ObjectProperty.class);
epo.setBeanClass(ObjectProperty.class);
epo.setBeanMask(testMask);
@ -64,7 +65,7 @@ public class PropertyRetryController extends BaseEditController {
action = epo.getAction();
}
ObjectPropertyDao propDao = ModelAccess.on(getServletContext()).getWebappDaoFactory().getObjectPropertyDao();
ObjectPropertyDao propDao = ModelAccess.on(req).getWebappDaoFactory().getObjectPropertyDao();
epo.setDataAccessObject(propDao);
OntologyDao ontDao = request.getUnfilteredWebappDaoFactory().getOntologyDao();

View file

@ -48,7 +48,7 @@ public class RestrictionOperationController extends BaseEditController {
String defaultLandingPage = getDefaultLandingPage(request);
try {
OntModel ontModel = ModelAccess.on(getServletContext())
OntModel ontModel = ModelAccess.on(req)
.getOntModel(TBOX_ASSERTIONS);
HashMap epoHash = null;

View file

@ -48,7 +48,7 @@ public class VclassEditController extends BaseEditController {
EditProcessObject epo = super.createEpo(request, FORCE_NEW);
request.setAttribute("epoKey", epo.getKey());
VClassDao vcwDao = ModelAccess.on(getServletContext()).getWebappDaoFactory(ASSERTIONS_ONLY).getVClassDao();
VClassDao vcwDao = ModelAccess.on(req).getWebappDaoFactory(ASSERTIONS_ONLY).getVClassDao();
VClass vcl = (VClass)vcwDao.getVClassByURI(request.getParameter("uri"));
if (vcl == null) {
@ -152,8 +152,8 @@ public class VclassEditController extends BaseEditController {
request.setAttribute("formSelect",formSelect);
// if supported, we want to show only the asserted superclasses and subclasses.
VClassDao vcDao = ModelAccess.on(getServletContext()).getWebappDaoFactory(ASSERTIONS_ONLY).getVClassDao();
VClassDao displayVcDao = ModelAccess.on(getServletContext()).getWebappDaoFactory().getVClassDao();
VClassDao vcDao = ModelAccess.on(req).getWebappDaoFactory(ASSERTIONS_ONLY).getVClassDao();
VClassDao displayVcDao = ModelAccess.on(req).getWebappDaoFactory().getVClassDao();
List<VClass> superVClasses = getVClassesForURIList(
vcDao.getSuperClassURIs(vcl.getURI(),false), displayVcDao);

View file

@ -66,11 +66,10 @@ public class VclassRetryController extends BaseEditController {
action = epo.getAction();
}
WebappDaoFactory wadf = ModelAccess.on(getServletContext()).getWebappDaoFactory();
WebappDaoFactory wadf = ModelAccess.on(req).getWebappDaoFactory();
VClassDao vcwDao = wadf.getVClassDao();
epo.setDataAccessObject(vcwDao);
VClassGroupDao cgDao = wadf.getVClassGroupDao();
OntologyDao oDao = wadf.getOntologyDao();
VClass vclassForEditing = null;

View file

@ -37,7 +37,7 @@ public class NamespacesListingController extends BaseEditController {
VitroRequest vrequest = new VitroRequest(request);
OntModel ontModel = ModelAccess.on(getServletContext()).getOntModel();
OntModel ontModel = ModelAccess.on(vrequest).getOntModel();
ArrayList results = new ArrayList();
request.setAttribute("results",results);

View file

@ -54,7 +54,7 @@ public class RestrictionsListingController extends BaseEditController {
epo = super.createEpo(request);
OntModel ontModel = ModelAccess.on(getServletContext()).getOntModel();
OntModel ontModel = ModelAccess.on(vrequest).getOntModel();
ObjectPropertyDao opDao = vrequest.getUnfilteredWebappDaoFactory().getObjectPropertyDao();
VClassDao vcDao = vrequest.getUnfilteredWebappDaoFactory().getVClassDao();

View file

@ -3,6 +3,8 @@
package edu.cornell.mannlib.vitro.webapp.controller.freemarker;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
@ -42,6 +44,8 @@ public class BrowseController extends FreemarkerHttpServlet {
List<VClassGroup> groups = null;
VClassGroupsForRequest vcgc = VClassGroupCache.getVClassGroups(vreq);
groups =vcgc.getGroups();
Collections.sort(groups, publicNameComparator);
// sortGroupListByPublicName(groups);
List<VClassGroupTemplateModel> vcgroups = new ArrayList<VClassGroupTemplateModel>(groups.size());
for (VClassGroup group : groups) {
vcgroups.add(new VClassGroupTemplateModel(group));
@ -50,4 +54,35 @@ public class BrowseController extends FreemarkerHttpServlet {
return new TemplateResponseValues(templateName, body);
}
public Comparator<VClassGroup> publicNameComparator = new Comparator<VClassGroup>() {
public int compare(VClassGroup s1, VClassGroup s2) {
String groupName1 = s1.getPublicName().toUpperCase();
String groupName2 = s2.getPublicName().toUpperCase();
//ascending order
return groupName1.compareTo(groupName2);
//descending order
//return groupName2.compareTo(groupName1);
}};
//
// public void sortGroupListByPublicName(List<VClassGroup> groupList) {
// groupList.sort(new Comparator<VClassGroup>() {
// public int compare(VClassGroup first, VClassGroup second) {
// if (first != null) {
// if (second != null) {
// return (first.getDisplayRank() - second.getDisplayRank());
// } else {
// log.error("error--2nd VClassGroup is null in VClassGroupDao.getGroupList().compare()");
// }
// } else {
// log.error("error--1st VClassGroup is null in VClassGroupDao.getGroupList().compare()");
// }
// return 0;
// }
// });
// }
}

View file

@ -0,0 +1,200 @@
package edu.cornell.mannlib.vitro.webapp.controller.freemarker;
import java.io.ByteArrayInputStream;
import java.io.ByteArrayOutputStream;
import java.io.InputStream;
import java.nio.charset.StandardCharsets;
import java.util.HashMap;
import javax.servlet.annotation.WebServlet;
import javax.servlet.http.HttpServletResponse;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.query.Query;
import org.apache.jena.query.QueryExecution;
import org.apache.jena.query.QueryExecutionFactory;
import org.apache.jena.query.QueryFactory;
import org.apache.jena.query.QuerySolution;
import org.apache.jena.query.QuerySolutionMap;
import org.apache.jena.query.ResultSet;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.ResourceFactory;
import org.apache.jena.shared.Lock;
import edu.cornell.mannlib.vitro.webapp.auth.permissions.SimplePermission;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.AuthorizationRequest;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.RedirectResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.TemplateResponseValues;
import edu.cornell.mannlib.vitro.webapp.dao.DisplayVocabulary;
import edu.cornell.mannlib.vitro.webapp.dao.jena.QueryUtils;
import edu.cornell.mannlib.vitro.webapp.dao.jena.event.BulkUpdateEvent;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames;
import edu.cornell.mannlib.vitro.webapp.rdfservice.ChangeSet;
import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFServiceException;
import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.RDFServiceUtils;
@WebServlet(name="DeleteIndividualController",urlPatterns="/deleteIndividualController")
public class DeleteIndividualController extends FreemarkerHttpServlet{
private static final Log log = LogFactory.getLog(DeleteIndividualController.class);
private static final boolean BEGIN = true;
private static final boolean END = !BEGIN;
private static String TYPE_QUERY = ""
+ "PREFIX vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#>"
+ "SELECT ?type "
+ "WHERE"
+ "{ ?individualURI vitro:mostSpecificType ?type ."
+ "}";
private static String queryForDeleteQuery =
"PREFIX display: <" + DisplayVocabulary.DISPLAY_NS +"> \n" +
"SELECT ?deleteQueryText WHERE { ?associatedURI display:hasDeleteQuery ?deleteQueryText }";
private static final String DEFAULT_DELETE_QUERY_TEXT = "DESCRIBE ?individualURI";
@Override
protected AuthorizationRequest requiredActions(VitroRequest vreq) {
return SimplePermission.DO_FRONT_END_EDITING.ACTION;
}
protected ResponseValues processRequest(VitroRequest vreq) {
String errorMessage = handleErrors(vreq);
if (!errorMessage.isEmpty()) {
return prepareErrorMessage(errorMessage);
}
String individualUri = vreq.getParameter("individualUri");
String type = getObjectMostSpecificType(individualUri, vreq);
Model displayModel = vreq.getDisplayModel();
String delteQueryText = getDeleteQueryForType(type, displayModel);
byte[] toRemove = getIndividualsToDelete(individualUri, delteQueryText, vreq);
if (toRemove.length > 0) {
deleteIndividuals(toRemove, vreq);
}
String redirectUrl = getRedirectUrl(vreq);
return new RedirectResponseValues(redirectUrl, HttpServletResponse.SC_SEE_OTHER);
}
private String getRedirectUrl(VitroRequest vreq) {
String redirectUrl = vreq.getParameter("redirectUrl");
if (redirectUrl != null) {
return redirectUrl;
}
return "/";
}
private TemplateResponseValues prepareErrorMessage(String errorMessage) {
HashMap<String, Object> map = new HashMap<String, Object>();
map.put("errorMessage", errorMessage);
return new TemplateResponseValues("error-message.ftl", map);
}
private String handleErrors(VitroRequest vreq) {
String uri = vreq.getParameter("individualUri");
if (uri == null) {
return "Individual uri is null. No object to delete.";
}
if (uri.contains(">")) {
return "Individual uri shouldn't contain >";
}
return "";
}
private static String getDeleteQueryForType(String typeURI, Model displayModel) {
String deleteQueryText = DEFAULT_DELETE_QUERY_TEXT;
Query queryForTypeSpecificDeleteQuery = QueryFactory.create(queryForDeleteQuery);
QuerySolutionMap initialBindings = new QuerySolutionMap();
initialBindings.add("associatedURI", ResourceFactory.createResource(typeURI));
displayModel.enterCriticalSection(Lock.READ);
try {
QueryExecution qexec = QueryExecutionFactory.create(queryForTypeSpecificDeleteQuery, displayModel, initialBindings);
try {
ResultSet results = qexec.execSelect();
while (results.hasNext()) {
QuerySolution solution = results.nextSolution();
deleteQueryText = solution.get("deleteQueryText").toString();
}
} finally {
qexec.close();
}
} finally {
displayModel.leaveCriticalSection();
}
if (!deleteQueryText.equals(DEFAULT_DELETE_QUERY_TEXT)) {
log.debug("For " + typeURI + " found delete query \n" + deleteQueryText);
} else {
log.debug("For " + typeURI + " delete query not found. Using defalut query \n" + deleteQueryText);
}
return deleteQueryText;
}
private String getObjectMostSpecificType(String individualURI, VitroRequest vreq) {
String type = "";
try {
Query typeQuery = QueryFactory.create(TYPE_QUERY);
QuerySolutionMap bindings = new QuerySolutionMap();
bindings.add("individualURI", ResourceFactory.createResource(individualURI));
Model ontModel = vreq.getJenaOntModel();
QueryExecution qexec = QueryExecutionFactory.create(typeQuery, ontModel, bindings);
ResultSet results = qexec.execSelect();
while (results.hasNext()) {
QuerySolution solution = results.nextSolution();
type = solution.get("type").toString();
log.debug(type);
}
} catch (Exception e) {
log.error("Failed to get type for individual URI " + individualURI);
log.error(e, e);
}
return type;
}
private byte[] getIndividualsToDelete(String targetIndividual, String deleteQuery, VitroRequest vreq) {
ByteArrayOutputStream out = new ByteArrayOutputStream();
try {
Query queryForTypeSpecificDeleteQuery = QueryFactory.create(deleteQuery);
QuerySolutionMap bindings = new QuerySolutionMap();
bindings.add("individualURI", ResourceFactory.createResource(targetIndividual));
Model ontModel = vreq.getJenaOntModel();
QueryExecution qexec = QueryExecutionFactory.create(queryForTypeSpecificDeleteQuery, ontModel, bindings);
Model results = qexec.execDescribe();
results.write(out, "N3");
} catch (Exception e) {
log.error("Query raised an error \n" + deleteQuery);
log.error(e, e);
}
return out.toByteArray();
}
private void deleteIndividuals(byte[] toRemove, VitroRequest vreq) {
String removingString = new String(toRemove, StandardCharsets.UTF_8);
RDFService rdfService = vreq.getRDFService();
ChangeSet cs = makeChangeSet(rdfService);
InputStream in = new ByteArrayInputStream(toRemove);
cs.addRemoval(in, RDFServiceUtils.getSerializationFormatFromJenaString("N3"), ModelNames.ABOX_ASSERTIONS);
try {
rdfService.changeSetUpdate(cs);
} catch (RDFServiceException e) {
log.error("Got error while removing\n" + removingString);
throw new RuntimeException(e);
}
}
private ChangeSet makeChangeSet(RDFService rdfService) {
ChangeSet cs = rdfService.manufactureChangeSet();
cs.addPreChangeEvent(new BulkUpdateEvent(null, BEGIN));
cs.addPostChangeEvent(new BulkUpdateEvent(null, END));
return cs;
}
}

View file

@ -10,6 +10,9 @@ import javax.servlet.http.HttpServletResponse;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.rdf.model.Property;
import org.apache.jena.rdf.model.ResourceFactory;
import edu.cornell.mannlib.vitro.webapp.auth.permissions.SimplePermission;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.AuthorizationRequest;
import edu.cornell.mannlib.vitro.webapp.beans.DataProperty;
@ -25,6 +28,8 @@ import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationUti
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.N3EditUtils;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess;
import edu.cornell.mannlib.vitro.webapp.web.URLEncoder;
/*
* Custom deletion controller to which deletion requests from default property form are sent. May be replaced
* later with additional features in process rdf form controller or alternative location.
@ -61,14 +66,14 @@ public class DeletePropertyController extends FreemarkerHttpServlet {
private String getRedirectUrl(VitroRequest vreq) {
// TODO Auto-generated method stub
// TODO Auto-generated method stub
String subjectUri = EditConfigurationUtils.getSubjectUri(vreq);
String predicateUri = EditConfigurationUtils.getPredicateUri(vreq);
int hashIndex = predicateUri.lastIndexOf("#");
String localName = predicateUri.substring(hashIndex + 1);
Property prop = ResourceFactory.createProperty(predicateUri);
String localName = prop.getLocalName();
String redirectUrl = "/entity?uri=" + URLEncoder.encode(subjectUri);
return redirectUrl + "#" + URLEncoder.encode(localName);
}
return redirectUrl + "#" + URLEncoder.encode(localName);
}
private String handleErrors(VitroRequest vreq) {

View file

@ -0,0 +1,435 @@
package edu.cornell.mannlib.vitro.webapp.controller.freemarker;
import static edu.cornell.mannlib.vitro.webapp.auth.requestedAction.AuthorizationRequest.UNAUTHORIZED;
import static edu.cornell.mannlib.vitro.webapp.controller.freemarker.ImageUploadController.PARAMETER_UPLOADED_FILE;
import java.io.IOException;
import java.io.InputStream;
import java.util.Arrays;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import javax.servlet.ServletException;
import javax.servlet.annotation.WebServlet;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.commons.fileupload.FileItem;
import org.apache.commons.io.FilenameUtils;
import org.apache.commons.lang3.RandomStringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.ontology.OntModel;
import org.apache.tika.Tika;
import org.apache.tika.mime.MimeType;
import org.apache.tika.mime.MimeTypeException;
import org.apache.tika.mime.MimeTypes;
import edu.cornell.mannlib.vitro.webapp.application.ApplicationUtils;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.AuthorizationRequest;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.RequestedAction;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.propstmt.AddObjectPropertyStatement;
import edu.cornell.mannlib.vitro.webapp.auth.requestedAction.propstmt.DropObjectPropertyStatement;
import edu.cornell.mannlib.vitro.webapp.beans.Individual;
import edu.cornell.mannlib.vitro.webapp.beans.Property;
import edu.cornell.mannlib.vitro.webapp.config.ConfigurationProperties;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.RedirectResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.TemplateResponseValues;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.filestorage.UploadedFileHelper;
import edu.cornell.mannlib.vitro.webapp.filestorage.model.FileInfo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
import edu.cornell.mannlib.vitro.webapp.modules.fileStorage.FileStorage;
@WebServlet(name = "FileUploadController", urlPatterns = { "/uploadFile" })
public class FileUploadController extends FreemarkerHttpServlet {
private static final String TEMPLATE_VAR_FORM_ACTION = "formAction";
private static final String TEMPLATE_VAR_MAX_FILE_SIZE = "maxFileSize";
private static final String PARAM_REFERRER = "referrer";
private static final String TEMPLATE_VAR_SUPPORTED_TYPES = "supportedTypes";
private static final String TEMPLATE_VAR_SUPPORTED_MIME_TYPES = "supportedMIMETypes";
private static final String TEMPLATE_VAR_ERROR_MESSAGE = "errorMessage";
private static final String DEFAULT_FILE_NAME = "fileName";
/**
*
*/
private static final Log log = LogFactory.getLog(FileUploadController.class);
private static final long serialVersionUID = 1L;
private static final String PARAMETER_ACTION = "action";
private static final String ACTION_DELETE = "delete";
private static final String ACTION_UPLOAD = "upload";
private static final String PARAMETER_FILE_URI = "fileUri";
private static final String PARAMETER_SUBJECT_URI = "subjectUri";
private static final String CONFIG_MAX_FILE_SIZE = "fileUpload.maxFileSize";
private static final String ALLOWED_MIME_TYPES = "fileUpload.allowedMIMETypes";
private static final Long DEFAULT_FILE_SIZE = (long) (10 * 1024 * 1024);
private static final String PARAMETER_PREDICATE_URI = "predicateUri";
private static final String DEFAULT_TEMPLATE = "fileUpload-default.ftl";
private static Long maxFileSize = DEFAULT_FILE_SIZE;
private FileStorage fileStorage;
private Set<String> allowedMimeTypes;
@Override
public void init() throws ServletException {
super.init();
fileStorage = ApplicationUtils.instance().getFileStorage();
setMaxFileSize();
setAllowedMimeTypes();
}
@Override
protected AuthorizationRequest requiredActions(VitroRequest vreq) {
RequestedAction ra;
try {
Property predicate = new Property(getPredicateUri(vreq));
final OntModel jenaOntModel = vreq.getJenaOntModel();
final String subject = getSubjectUri(vreq);
if (isUpload(vreq)) {
ra = new AddObjectPropertyStatement(jenaOntModel, subject, predicate,RequestedAction.SOME_URI);
} else { // delete
ra = new DropObjectPropertyStatement(jenaOntModel, subject, predicate, getFileUri(vreq));
}
return ra;
} catch (Exception e) {
return UNAUTHORIZED;
}
}
private String getFileUri(VitroRequest vreq) {
return vreq.getParameter(PARAMETER_FILE_URI);
}
@Override
protected ResponseValues processRequest(VitroRequest vreq) {
try {
getReferrer(vreq);
validateRequest(vreq);
if (isUpload(vreq)) {
uploadFile(vreq);
} else if (isDelete(vreq)) {
deleteFile(vreq);
}
} catch (Exception e) {
return pageResponse(vreq, e.getMessage());
}
return new RedirectResponseValues(getNextPageUrl(vreq), HttpServletResponse.SC_SEE_OTHER);
}
private String getNextPageUrl(VitroRequest vreq) {
return getReferrer(vreq);
}
private TemplateResponseValues pageResponse(VitroRequest vreq, String error) {
TemplateResponseValues rv = new TemplateResponseValues(DEFAULT_TEMPLATE);
rv.put(PARAMETER_ACTION, vreq.getParameter(PARAMETER_ACTION));
rv.put(TEMPLATE_VAR_FORM_ACTION, formatRequestUrl(vreq));
if (!error.isEmpty()) {
rv.put(TEMPLATE_VAR_ERROR_MESSAGE, error);
}
rv.put(PARAM_REFERRER,getReferrer(vreq));
rv.put(TEMPLATE_VAR_SUPPORTED_TYPES, printAllowedFileExtensions());
rv.put(TEMPLATE_VAR_SUPPORTED_MIME_TYPES, printAllowedMimeTypes());
rv.put(TEMPLATE_VAR_MAX_FILE_SIZE, maxFileSizeInMegabytes());
return rv;
}
private String formatRequestUrl(VitroRequest vreq) {
String result = vreq.getRequestURL().toString() + "?";
String query = vreq.getQueryString();
if (query != null) {
result += query;
}
String referrer = vreq.getParameter(PARAM_REFERRER);
if (referrer == null || referrer.isEmpty()) {
result += "&" + PARAM_REFERRER + "=" + getReferrer(vreq);
}
return result;
}
private Double maxFileSizeInMegabytes() {
if (maxFileSize > 0) {
return ((double) maxFileSize/1048576);
} else {
return 0.0;
}
}
private void validateRequest(VitroRequest vreq) throws FileUploadException {
if (isUpload(vreq)) {
validateUploadRequest(vreq);
} else if (isDelete(vreq)) {
validateDeleteRequest(vreq);
} else if (hasAction(vreq)) {
throw new FileUploadException("Only delete and upload actions supported");
} else {
throw new FileUploadException("No action specified");
}
}
private void validateDeleteRequest(VitroRequest vreq) throws FileUploadException {
validateSubjectUri(vreq);
validatePredicateUri(vreq);
validateFileUri(vreq);
}
private void validateUploadRequest(VitroRequest vreq) throws FileUploadException {
validateSubjectUri(vreq);
validatePredicateUri(vreq);
validateFile(vreq);
}
private void validateFile(VitroRequest vreq) throws FileUploadException {
Map<String, List<FileItem>> map = vreq.getFiles();
if (map == null) {
throw new FileUploadException("File to upload not found");
}
List<FileItem> list = map.get(PARAMETER_UPLOADED_FILE);
if ((list == null) || list.isEmpty()) {
throw new FileUploadException("No file uploaded");
}
FileItem file = list.get(0);
if (file.getSize() == 0) {
throw new FileUploadException("Uploaded file size is 0");
}
if (file.getSize() > maxFileSize) {
throw new FileUploadException("Uploaded file is too big. Maximum file size is " + maxFileSize
+ " bytes. Uploaded file is " + file.getSize() + " bytes.");
}
validateMimeType(file);
}
private void validateMimeType(FileItem file) throws FileUploadException {
String mime = getMimeType(file);
if (mime.isEmpty()) {
throw new FileUploadException("File type is unrecognized");
}
String extension = null;
MimeTypes types = MimeTypes.getDefaultMimeTypes();
try {
MimeType mimeType = types.forName(mime);
extension = mimeType.getExtension();
} catch (MimeTypeException e) {
log.error(e.getLocalizedMessage());
}
if (extension == null || extension.isEmpty()) {
throw new FileUploadException("Extension for mime type " + mime + " not found");
}
if (!allowedMimeTypes.contains(mime.toLowerCase())) {
log.error("File mime type is not allowed. " + printAllowedMimeTypes() + " Current mime type is " + mime);
throw new FileUploadException(
"File type is not allowed. Allowed file types: " + printAllowedFileExtensions() +
" Current file type is " + getExtension(mime).replaceAll("\\.", ""));
}
}
private String printAllowedFileExtensions() {
StringBuilder sb = new StringBuilder();
for (Iterator<String> it = allowedMimeTypes.iterator(); it.hasNext();) {
String mimeType = (String) it.next();
String extension = getExtension(mimeType);
sb.append(extension.replaceAll("\\.", ""));
if (it.hasNext()) {
sb.append(", ");
} else {
sb.append(".");
}
}
return sb.toString();
}
private String printAllowedMimeTypes() {
StringBuilder sb = new StringBuilder();
for (Iterator<String> it = allowedMimeTypes.iterator(); it.hasNext();) {
String mimeType = (String) it.next();
sb.append(mimeType);
if (it.hasNext()) {
sb.append(", ");
} else {
sb.append(".");
}
}
return sb.toString();
}
private boolean hasAction(VitroRequest vreq) {
return vreq.getParameter(PARAMETER_ACTION) != null;
}
private void deleteFile(VitroRequest vreq) {
String subjectUri = getSubjectUri(vreq);
String predicateUri = getPredicateUri(vreq);
String fileUri = getFileUri(vreq);
WebappDaoFactory webAppDaoFactory = vreq.getUnfilteredWebappDaoFactory();
UploadedFileHelper fileHelper = new UploadedFileHelper(fileStorage, webAppDaoFactory, getServletContext());
fileHelper.removeUploadedFile(subjectUri, predicateUri, fileUri);
}
private void uploadFile(VitroRequest vreq) throws FileUploadException {
String subjectUri = getSubjectUri(vreq);
String predicateUri = getPredicateUri(vreq);
FileItem file = getUploadedFile(vreq);
String uploadedFileName = getUploadedFileName(file);
String storedFileName = createStoredFileName(file);
WebappDaoFactory webAppDaoFactory = vreq.getUnfilteredWebappDaoFactory();
UploadedFileHelper fileHelper = new UploadedFileHelper(fileStorage, webAppDaoFactory, getServletContext());
FileInfo fileInfo = createFile(file, storedFileName, fileHelper);
fileHelper.attachFileToSubject(fileInfo, subjectUri, predicateUri);
fileHelper.setPublicFileName(fileInfo, uploadedFileName);
}
private FileInfo createFile(FileItem file, String storedFileName, UploadedFileHelper fileHelper)
throws FileUploadException {
FileInfo fileInfo = null;
try {
fileInfo = fileHelper.createFile(storedFileName, getMimeType(file), file.getInputStream());
} catch (Exception e) {
log.error(e.getLocalizedMessage());
throw new FileUploadException(e.getLocalizedMessage());
}
return fileInfo;
}
private String createStoredFileName(FileItem file) {
String mimeString = getMimeType(file);
int length = 64;
boolean useLetters = true;
boolean useNumbers = true;
String storedFileName = RandomStringUtils.random(length, useLetters, useNumbers) + getExtension(mimeString);
return storedFileName;
}
private String getExtension(String mimeString) {
String extension = "";
MimeTypes types = MimeTypes.getDefaultMimeTypes();
try {
MimeType mime = types.forName(mimeString);
extension = mime.getExtension();
} catch (MimeTypeException e) {
log.error(e.getLocalizedMessage());
}
return extension;
}
private String getUploadedFileName(FileItem file) {
String fileName = file.getName();
if (fileName == null) {
return DEFAULT_FILE_NAME;
} else {
return FilenameUtils.getName(fileName);
}
}
private String getMimeType(FileItem file) {
Tika tika = new Tika();
InputStream is;
String mime = "";
try {
is = file.getInputStream();
mime = tika.detect(is);
} catch (IOException e) {
log.error(e.getLocalizedMessage());
}
return mime;
}
private void validateFileUri(VitroRequest vreq) throws FileUploadException {
String fileUri = getFileUri(vreq);
validateUriNotEmpty(fileUri,"file");
validateIndividual(vreq, fileUri);
}
private void validateSubjectUri(VitroRequest vreq) throws FileUploadException {
String subjectUri = getSubjectUri(vreq);
validateUriNotEmpty(subjectUri,"subject");
validateIndividual(vreq, subjectUri);
}
private void validatePredicateUri(VitroRequest vreq) throws FileUploadException {
String predicateUri = getPredicateUri(vreq);
validateUriNotEmpty(predicateUri,"predicate");
validateIndividual(vreq, predicateUri);
}
private void validateIndividual(VitroRequest vreq, String subjectUri) throws FileUploadException {
Individual subject = vreq.getUnfilteredWebappDaoFactory().getIndividualDao()
.getIndividualByURI(subjectUri);
if (subject == null) {
throw new FileUploadException("Uri " + subjectUri + "doesn't exist");
}
}
private void validateUriNotEmpty(String predicateUri,String name) throws FileUploadException {
if (predicateUri == null || predicateUri.trim().isEmpty()) {
throw new FileUploadException("No " + name + " uri was given");
}
}
private String getPredicateUri(VitroRequest vreq) {
return vreq.getParameter(PARAMETER_PREDICATE_URI);
}
private String getSubjectUri(VitroRequest vreq) {
return vreq.getParameter(PARAMETER_SUBJECT_URI);
}
private FileItem getUploadedFile(VitroRequest vreq) {
return vreq.getFiles().get(PARAMETER_UPLOADED_FILE).get(0);
}
private boolean isUpload(VitroRequest vreq) {
String action = vreq.getParameter(PARAMETER_ACTION);
return ACTION_UPLOAD.equals(action);
}
private boolean isDelete(VitroRequest vreq) {
String action = vreq.getParameter(PARAMETER_ACTION);
return ACTION_DELETE.equals(action);
}
private void setAllowedMimeTypes() {
ConfigurationProperties config = ConfigurationProperties.getBean(getServletContext());
String allowedTypes = config.getProperty(ALLOWED_MIME_TYPES, "");
allowedMimeTypes = new HashSet<String>(Arrays.asList(allowedTypes.toLowerCase().trim().split("\\s*,\\s*")));
}
private String getReferrer(VitroRequest vreq) {
String referrer = vreq.getParameter(PARAM_REFERRER);
if (referrer == null) {
referrer = vreq.getHeader("Referer");
}
if (referrer == null) {
referrer = "/";
}
return referrer;
}
private void setMaxFileSize() {
ConfigurationProperties config = ConfigurationProperties.getBean(getServletContext());
String configFileSize = config.getProperty(CONFIG_MAX_FILE_SIZE, DEFAULT_FILE_SIZE.toString());
try {
maxFileSize = Long.parseLong(configFileSize);
} catch (NumberFormatException e) {
log.error("maxFileSize parsing failed");
log.error(e);
}
}
static class FileUploadException extends Exception {
private static final long serialVersionUID = 1L;
private final Object[] parameters;
FileUploadException(String message, Object... parameters) {
super(message);
this.parameters = parameters;
}
public String formatMessage(HttpServletRequest req) {
return I18n.text(req, getMessage(), parameters);
}
}
}

View file

@ -8,6 +8,7 @@ import static javax.mail.Message.RecipientType.TO;
import java.io.IOException;
import java.io.PrintWriter;
import java.io.StringWriter;
import java.nio.charset.Charset;
import java.util.Calendar;
import java.util.Date;
import java.util.HashMap;
@ -17,7 +18,6 @@ import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import edu.cornell.mannlib.vitro.webapp.dao.jena.MenuDaoJena;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -93,6 +93,8 @@ public class FreemarkerHttpServlet extends VitroHttpServlet {
throws IOException, ServletException {
super.doGet(request,response);
//UQAM-Optimization set for UTF-8
response.setCharacterEncoding("UTF-8");
VitroRequest vreq = new VitroRequest(request);
ResponseValues responseValues = null;
@ -103,8 +105,8 @@ public class FreemarkerHttpServlet extends VitroHttpServlet {
if (!isAuthorizedToDisplayPage(request, response, requiredActions(vreq))) {
return;
}
responseValues = processRequest(vreq);
doResponse(vreq, response, responseValues);
} catch (Throwable e) {
@ -256,7 +258,7 @@ public class FreemarkerHttpServlet extends VitroHttpServlet {
protected void doTemplate(VitroRequest vreq, HttpServletResponse response,
ResponseValues values) throws TemplateProcessingException {
Map<String, Object> templateDataModel = new HashMap<String, Object>();
Map<String, Object> templateDataModel = new HashMap<String, Object>();
templateDataModel.putAll(getPageTemplateValues(vreq));
// Add the values that we got from the subcontroller processRequest() method, and merge to the template.
@ -276,8 +278,15 @@ public class FreemarkerHttpServlet extends VitroHttpServlet {
// is specified in the main page template.
bodyString = "";
}
templateDataModel.put("body", bodyString);
String lang = vreq.getLocale().getLanguage();
if (!vreq.getLocale().getCountry().isEmpty()) {
lang += "-" + vreq.getLocale().getCountry();
}
templateDataModel.put("country", lang);
// Tell the template and any directives it uses that we're processing a page template.
templateDataModel.put("templateType", PAGE_TEMPLATE_TYPE);
@ -462,7 +471,7 @@ public class FreemarkerHttpServlet extends VitroHttpServlet {
protected MainMenu getDisplayModelMenu(VitroRequest vreq){
String url = vreq.getRequestURI().substring(vreq.getContextPath().length());
return vreq.getWebappDaoFactory().getMenuDao().getMainMenu(vreq, url);
return vreq.getWebappDaoFactory().getMenuDao().getMainMenu(url);
}
// NIHVIVO-3307: we need this here instead of FreemarkerConfiguration.java so that updates to

View file

@ -42,7 +42,7 @@ public class TemplateProcessingHelper {
try {
Environment env = template.createProcessingEnvironment(map, writer);
// Define a setup template to be included by every page template
String templateType = (String) map.get("templateType");
if (FreemarkerHttpServlet.PAGE_TEMPLATE_TYPE.equals(templateType)) {

View file

@ -37,6 +37,7 @@ public class UrlBuilder {
LOGIN("/login"),
LOGOUT("/logout"),
OBJECT_PROPERTY_EDIT("/propertyEdit"),
EXTENDED_SEARCH("/extendedsearch"),
SEARCH("/search"),
SITE_ADMIN("/siteAdmin"),
TERMS_OF_USE("/termsOfUse"),

View file

@ -11,28 +11,29 @@ import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import javax.servlet.ServletException;
import javax.servlet.annotation.WebServlet;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.commons.lang3.LocaleUtils;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.query.QuerySolution;
import org.apache.jena.query.ResultSet;
import org.apache.jena.rdf.model.Literal;
import edu.cornell.mannlib.vitro.webapp.beans.Individual;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.FreemarkerHttpServlet;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ExceptionResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.ResponseValues;
import edu.cornell.mannlib.vitro.webapp.controller.freemarker.responsevalues.TemplateResponseValues;
import edu.cornell.mannlib.vitro.webapp.dao.jena.QueryUtils;
import edu.cornell.mannlib.vitro.webapp.i18n.selection.SelectedLocale;
import edu.cornell.mannlib.vitro.webapp.rdfservice.filter.LanguageFilteringUtils;
/*Servlet to view all labels in various languages for individual*/
@ -47,12 +48,13 @@ public class ViewLabelsServlet extends FreemarkerHttpServlet{
String subjectUri = vreq.getParameter("subjectUri");
body.put("subjectUri", subjectUri);
try {
//Get all language codes/labels in the system, and this list is sorted by language name
List<HashMap<String, String>> locales = this.getLocales(vreq);
//the labels already added by the user
ArrayList<Literal> existingLabels = this.getExistingLabels(subjectUri, vreq);
//Get all language codes/labels used in the list of existing labels
List<HashMap<String, String>> locales = this.getLocales(vreq, existingLabels);
//Get code to label hashmap - we use this to get the language name for the language code returned in the rdf literal
HashMap<String, String> localeCodeToNameMap = this.getFullCodeToLanguageNameMap(locales);
//the labels already added by the user
ArrayList<Literal> existingLabels = this.getExistingLabels(subjectUri, vreq);
//existing labels keyed by language name and each of the list of labels is sorted by language name
HashMap<String, List<LabelInformation>> existingLabelsByLanguageName = this.getLabelsSortedByLanguageName(existingLabels, localeCodeToNameMap, vreq, subjectUri);
//Get available locales for the drop down for adding a new label, also sorted by language name
@ -137,20 +139,26 @@ public class ViewLabelsServlet extends FreemarkerHttpServlet{
doGet(request, response);
}
//get locales
public List<HashMap<String, String>> getLocales(VitroRequest vreq) {
List<Locale> selectables = SelectedLocale.getSelectableLocales(vreq);
if (selectables.isEmpty()) {
//get locales present in list of literals
public List<HashMap<String, String>> getLocales(VitroRequest vreq,
List<Literal> existingLiterals) {
Set<Locale> locales = new HashSet<Locale>();
for(Literal literal : existingLiterals) {
String language = literal.getLanguage();
if(!StringUtils.isEmpty(language)) {
locales.add(LanguageFilteringUtils.languageToLocale(language));
}
}
if (locales.isEmpty()) {
return Collections.emptyList();
}
List<HashMap<String, String>> list = new ArrayList<HashMap<String, String>>();
Locale currentLocale = SelectedLocale.getCurrentLocale(vreq);
for (Locale locale : selectables) {
for (Locale locale : locales) {
try {
list.add(buildLocaleMap(locale, currentLocale));
} catch (FileNotFoundException e) {
log.warn("Can't show the Locale selector for '" + locale
+ "': " + e);
log.warn("Can't show locale '" + locale + "': " + e);
}
}
@ -188,8 +196,8 @@ public class ViewLabelsServlet extends FreemarkerHttpServlet{
ArrayList<Literal> labels = new ArrayList<Literal>();
try {
//We want to get the labels for all the languages, not just the display language
ResultSet results = QueryUtils.getLanguageNeutralQueryResults(queryStr, vreq);
// Show only labels with current language filtering
ResultSet results = QueryUtils.getQueryResults(queryStr, vreq);
while (results.hasNext()) {
QuerySolution soln = results.nextSolution();
Literal nodeLiteral = soln.get("label").asLiteral();

View file

@ -6,14 +6,13 @@ import java.io.IOException;
import java.sql.SQLException;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.apache.jena.rdf.model.RDFNode;
import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.IndividualTemplateModelBuilder;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.query.QuerySolution;
import org.apache.jena.query.ResultSet;
@ -36,6 +35,7 @@ import edu.cornell.mannlib.vitro.webapp.i18n.selection.SelectedLocale;
import edu.cornell.mannlib.vitro.webapp.utils.dataGetter.ExecuteDataRetrieval;
import edu.cornell.mannlib.vitro.webapp.web.beanswrappers.ReadOnlyBeansWrapper;
import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.IndividualTemplateModel;
import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.IndividualTemplateModelBuilder;
import edu.ucsf.vitro.opensocial.OpenSocialManager;
import freemarker.ext.beans.BeansWrapper;
import freemarker.template.TemplateModel;
@ -123,8 +123,10 @@ class IndividualResponseBuilder {
* into the data model: no real data can be modified.
*/
// body.put("individual", wrap(itm, BeansWrapper.EXPOSE_SAFE));
body.put("labelCount", getLabelCount(itm.getUri(), vreq));
body.put("languageCount", getLanguagesRepresentedCount(itm.getUri(), vreq));
LabelAndLanguageCount labelAndLanguageCount = getLabelAndLanguageCount(
itm.getUri(), vreq);
body.put("labelCount", labelAndLanguageCount.getLabelCount());
body.put("languageCount", labelAndLanguageCount.getLanguageCount());
//We also need to know the number of available locales
body.put("localesCount", SelectedLocale.getSelectableLocales(vreq).size());
body.put("profileType", getProfileType(itm.getUri(), vreq));
@ -282,61 +284,103 @@ class IndividualResponseBuilder {
return map;
}
private static String LABEL_COUNT_QUERY = ""
+ "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> \n"
+ "SELECT ( str(COUNT(?label)) AS ?labelCount ) WHERE { \n"
+ " ?subject rdfs:label ?label \n"
+ " FILTER isLiteral(?label) \n"
+ "}" ;
private static String DISTINCT_LANGUAGE_QUERY = ""
private static String LABEL_QUERY = ""
+ "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> \n"
+ "SELECT ( str(COUNT(DISTINCT lang(?label))) AS ?languageCount ) WHERE { \n"
+ "SELECT ?label WHERE { \n"
+ " ?subject rdfs:label ?label \n"
+ " FILTER isLiteral(?label) \n"
+ "}" ;
// Queries that were previously used for counts via RDFService that didn't
// filter results by language. With language filtering, aggregate
// functions like COUNT() cannot be used.
// private static String LABEL_COUNT_QUERY = ""
// + "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> \n"
// + "SELECT ( str(COUNT(?label)) AS ?labelCount ) WHERE { \n"
// + " ?subject rdfs:label ?label \n"
// + " FILTER isLiteral(?label) \n"
// + "}" ;
private static Integer getLabelCount(String subjectUri, VitroRequest vreq) {
String queryStr = QueryUtils.subUriForQueryVar(LABEL_COUNT_QUERY, "subject", subjectUri);
// private static String DISTINCT_LANGUAGE_QUERY = ""
// + "PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> \n"
// + "SELECT ( str(COUNT(DISTINCT lang(?label))) AS ?languageCount ) WHERE { \n"
// + " ?subject rdfs:label ?label \n"
// + " FILTER isLiteral(?label) \n"
// + "}" ;
private static LabelAndLanguageCount getLabelAndLanguageCount(
String subjectUri, VitroRequest vreq) {
// 1.12.0 Now filtering to only the labels for the current locale so as
// to be consistent with other editing forms. Because the language
// filter can only act on a result set containing actual literals,
// we can't do the counting with a COUNT() in the query itself. So
// we will now use the LABEL_QUERY instead of LABEL_COUNT_QUERY and
// count the rows and the number of distinct languages represented.
Set<String> distinctLanguages = new HashSet<String>();
String queryStr = QueryUtils.subUriForQueryVar(LABEL_QUERY, "subject", subjectUri);
log.debug("queryStr = " + queryStr);
int theCount = 0;
try {
//ResultSet results = QueryUtils.getQueryResults(queryStr, vreq);
//Get query results across all languages in order for template to show manage labels link correctly
ResultSet results = QueryUtils.getLanguageNeutralQueryResults(queryStr, vreq);
if (results.hasNext()) {
QuerySolution soln = results.nextSolution();
RDFNode labelCount = soln.get("labelCount");
if (labelCount != null && labelCount.isLiteral()) {
theCount = labelCount.asLiteral().getInt();
int labelCount = 0;
try {
ResultSet results = QueryUtils.getQueryResults(queryStr, vreq);
while(results.hasNext()) {
QuerySolution qsoln = results.next();
labelCount++;
String lang = qsoln.getLiteral("label").getLanguage();
if(lang == null) {
lang = "";
}
distinctLanguages.add(lang);
}
} catch (Exception e) {
log.error(e, e);
}
return theCount;
return new LabelAndLanguageCount(labelCount, distinctLanguages.size());
}
private static class LabelAndLanguageCount {
private Integer labelCount;
private Integer languageCount;
public LabelAndLanguageCount(Integer labelCount, Integer languageCount) {
this.labelCount = labelCount;
this.languageCount = languageCount;
}
public Integer getLabelCount() {
return this.labelCount;
}
public Integer getLanguageCount() {
return this.languageCount;
}
}
//what is the number of languages represented across the labels
private static Integer getLanguagesRepresentedCount(String subjectUri, VitroRequest vreq) {
String queryStr = QueryUtils.subUriForQueryVar(DISTINCT_LANGUAGE_QUERY, "subject", subjectUri);
log.debug("queryStr = " + queryStr);
int theCount = 0;
try {
ResultSet results = QueryUtils.getLanguageNeutralQueryResults(queryStr, vreq);
if (results.hasNext()) {
QuerySolution soln = results.nextSolution();
RDFNode languageCount = soln.get("languageCount");
if (languageCount != null && languageCount.isLiteral()) {
theCount = languageCount.asLiteral().getInt();
}
}
} catch (Exception e) {
log.error(e, e);
}
return theCount;
}
// This version not compatible with language-filtering RDF services
// private static Integer getLanguagesRepresentedCount(String subjectUri, VitroRequest vreq) {
// String queryStr = QueryUtils.subUriForQueryVar(DISTINCT_LANGUAGE_QUERY, "subject", subjectUri);
// log.debug("queryStr = " + queryStr);
// int theCount = 0;
// try {
//
// ResultSet results = QueryUtils.getLanguageNeutralQueryResults(queryStr, vreq);
// if (results.hasNext()) {
// QuerySolution soln = results.nextSolution();
// RDFNode languageCount = soln.get("languageCount");
// if (languageCount != null && languageCount.isLiteral()) {
// theCount = languageCount.asLiteral().getInt();
// log.info("Language count is " + theCount);
// }
// }
// } catch (Exception e) {
// log.error(e, e);
// }
// log.info("Returning language count " + theCount);
// return theCount;
// }
private static String PROFILE_TYPE_QUERY = ""
+ "PREFIX display: <http://vitro.mannlib.cornell.edu/ontologies/display/1.1#> \n"

View file

@ -4,6 +4,7 @@ package edu.cornell.mannlib.vitro.webapp.controller.json;
import java.util.HashMap;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import com.fasterxml.jackson.databind.node.ArrayNode;
@ -15,6 +16,7 @@ import org.apache.commons.logging.LogFactory;
import edu.cornell.mannlib.vitro.webapp.beans.Individual;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.dao.IndividualDao;
import edu.cornell.mannlib.vitro.webapp.i18n.selection.SelectedLocale;
import edu.cornell.mannlib.vitro.webapp.services.shortview.ShortViewService;
import edu.cornell.mannlib.vitro.webapp.services.shortview.ShortViewService.ShortViewContext;
import edu.cornell.mannlib.vitro.webapp.services.shortview.ShortViewServiceSetup;
@ -73,7 +75,11 @@ public class GetRandomSearchIndividualsByVClass extends GetSearchIndividualsByVC
modelMap.put("individual",
IndividualTemplateModelBuilder.build(individual, vreq));
modelMap.put("vclass", vclassName);
String langCtx = vreq.getLocale().getLanguage(); //UQAM-Linguistic-Management build the linguistic context
if (!vreq.getLocale().getCountry().isEmpty()) {
langCtx += "-" + vreq.getLocale().getCountry();
}
modelMap.put("langCtx", langCtx); // UQAM-Linguistic-Management add the linguistic context to map
ShortViewService svs = ShortViewServiceSetup.getService(ctx);
return svs.renderShortView(individual, ShortViewContext.BROWSE,
modelMap, vreq);

View file

@ -155,6 +155,7 @@ public class VitroVocabulary {
public static final String USERACCOUNT_LAST_LOGIN_TIME = VITRO_AUTH + "lastLoginTime";
public static final String USERACCOUNT_STATUS = VITRO_AUTH + "status";
public static final String USERACCOUNT_PASSWORD_LINK_EXPIRES = VITRO_AUTH + "passwordLinkExpires";
public static final String USERACCOUNT_EMAIL_KEY = VITRO_AUTH + "emailKey";
public static final String USERACCOUNT_PASSWORD_CHANGE_REQUIRED = VITRO_AUTH + "passwordChangeRequired";
public static final String USERACCOUNT_EXTERNAL_AUTH_ID = VITRO_AUTH + "externalAuthId";
public static final String USERACCOUNT_EXTERNAL_AUTH_ONLY = VITRO_AUTH + "externalAuthOnly";
@ -233,6 +234,9 @@ public class VitroVocabulary {
public static final String IND_MAIN_IMAGE = VITRO_PUBLIC + "mainImage";
public static final String IND_IMAGE = VITRO_PUBLIC + "image";
public static final String STORED_FILE = VITRO_PUBLIC + "storedFile";
public static final String PUBLIC_FILENAME = VITRO_PUBLIC + "publicFilename";
// =============== Date Time with Precision vocabulary ===============
private static final String DATETIME_NS = "http://vivoweb.org/ontology/core#";

View file

@ -5,6 +5,8 @@ package edu.cornell.mannlib.vitro.webapp.dao;
import java.util.List;
import java.util.Set;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public interface WebappDaoFactory {
/**
@ -132,4 +134,6 @@ public interface WebappDaoFactory {
public MenuDao getMenuDao();
public I18nBundle getI18nBundle();
}

View file

@ -5,21 +5,25 @@ package edu.cornell.mannlib.vitro.webapp.dao;
import java.util.Arrays;
import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import edu.cornell.mannlib.vitro.webapp.dao.PropertyDao.FullPropertyKey;
import edu.cornell.mannlib.vitro.webapp.rdfservice.filter.LanguageFilteringUtils;
public class WebappDaoFactoryConfig {
private List<String> preferredLanguages;
private List<Locale> preferredLocales;
private String defaultNamespace;
private Set<String> nonUserNamespaces;
private boolean isUnderlyingStoreReasoned = false;
public Map<FullPropertyKey, String> customListViewConfigFileMap;
public WebappDaoFactoryConfig() {
preferredLanguages = Arrays.asList("en-US", "en", "EN");
preferredLanguages = Arrays.asList("en-US", "en", "EN");
preferredLocales = LanguageFilteringUtils.languagesToLocales(preferredLanguages);
defaultNamespace = "http://vitro.mannlib.cornell.edu/ns/default#";
nonUserNamespaces = new HashSet<String>();
nonUserNamespaces.add(VitroVocabulary.vitroURI);
@ -33,6 +37,14 @@ public class WebappDaoFactoryConfig {
this.preferredLanguages = pl;
}
public List<Locale> getPreferredLocales() {
return this.preferredLocales;
}
public void setPreferredLocales(List<Locale> pl) {
this.preferredLocales = pl;
}
public String getDefaultNamespace() {
return defaultNamespace;
}

View file

@ -17,7 +17,7 @@ import edu.cornell.mannlib.vitro.webapp.dao.DataPropertyDao;
import edu.cornell.mannlib.vitro.webapp.dao.InsertException;
import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
class DataPropertyDaoFiltering extends BaseFiltering implements DataPropertyDao{
public class DataPropertyDaoFiltering extends BaseFiltering implements DataPropertyDao{
final DataPropertyDao innerDataPropertyDao;
final VitroFilters filters;

View file

@ -18,7 +18,7 @@ import edu.cornell.mannlib.vitro.webapp.beans.Individual;
import edu.cornell.mannlib.vitro.webapp.dao.DataPropertyStatementDao;
import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
class DataPropertyStatementDaoFiltering extends BaseFiltering implements DataPropertyStatementDao{
public class DataPropertyStatementDaoFiltering extends BaseFiltering implements DataPropertyStatementDao{
final DataPropertyStatementDao innerDataPropertyStatementDao;
final VitroFilters filters;

View file

@ -26,47 +26,34 @@ public class FauxPropertyDaoFiltering extends BaseFiltering implements FauxPrope
@Override
public List<FauxProperty> getFauxPropertiesForBaseUri(String uri) {
// TODO Auto-generated method stub
throw new RuntimeException(
"FauxPropertyDao.getFauxPropertiesForBaseUri() not implemented.");
return innerFauxPropertyDao.getFauxPropertiesForBaseUri(uri);
}
@Override
public FauxProperty getFauxPropertyFromContextUri(String contextUri) {
// TODO Auto-generated method stub
throw new RuntimeException(
"FauxPropertyDaoFiltering.getFauxPropertyFromConfigContextUri() not implemented.");
return innerFauxPropertyDao.getFauxPropertyFromContextUri(contextUri);
}
@Override
public FauxProperty getFauxPropertyByUris(String domainUri, String baseUri,
String rangeUri) {
// TODO Auto-generated method stub
throw new RuntimeException(
"FauxPropertyDaoFiltering.getFauxPropertyByUris() not implemented.");
return innerFauxPropertyDao.getFauxPropertyByUris(domainUri, baseUri,
rangeUri);
}
@Override
public void updateFauxProperty(FauxProperty fp) {
// TODO Auto-generated method stub
throw new RuntimeException("FauxPropertyDaoFiltering.updateFauxProperty() not implemented.");
innerFauxPropertyDao.updateFauxProperty(fp);
}
@Override
public void deleteFauxProperty(FauxProperty fp) {
// TODO Auto-generated method stub
throw new RuntimeException("FauxPropertyDao.deleteFauxProperty() not implemented.");
innerFauxPropertyDao.deleteFauxProperty(fp);
}
@Override
public void insertFauxProperty(FauxProperty fp) {
// TODO Auto-generated method stub
throw new RuntimeException("FauxPropertyDao.insertFauxProperty() not implemented.");
innerFauxPropertyDao.insertFauxProperty(fp);
}
}

View file

@ -20,7 +20,7 @@ import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
import edu.cornell.mannlib.vitro.webapp.edit.EditLiteral;
class IndividualDaoFiltering extends BaseFiltering implements IndividualDao{
public class IndividualDaoFiltering extends BaseFiltering implements IndividualDao{
IndividualDao innerIndividualDao;
VitroFilters filters;

View file

@ -17,7 +17,7 @@ import edu.cornell.mannlib.vitro.webapp.dao.InsertException;
import edu.cornell.mannlib.vitro.webapp.dao.ObjectPropertyDao;
import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
class ObjectPropertyDaoFiltering extends BaseFiltering implements ObjectPropertyDao{
public class ObjectPropertyDaoFiltering extends BaseFiltering implements ObjectPropertyDao{
final ObjectPropertyDao innerObjectPropertyDao;
final VitroFilters filters;

View file

@ -16,7 +16,7 @@ import edu.cornell.mannlib.vitro.webapp.beans.ObjectPropertyStatementImpl;
import edu.cornell.mannlib.vitro.webapp.dao.ObjectPropertyStatementDao;
import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
class ObjectPropertyStatementDaoFiltering extends BaseFiltering implements ObjectPropertyStatementDao{
public class ObjectPropertyStatementDaoFiltering extends BaseFiltering implements ObjectPropertyStatementDao{
final ObjectPropertyStatementDao innerObjectPropertyStatementDao;
final VitroFilters filters;

View file

@ -24,6 +24,7 @@ import edu.cornell.mannlib.vitro.webapp.dao.VClassDao;
import edu.cornell.mannlib.vitro.webapp.dao.VClassGroupDao;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.dao.filtering.filters.VitroFilters;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
/**
* This wraps a WebappDaoFactory and applies filtering.
@ -67,7 +68,7 @@ public class WebappDaoFactoryFiltering implements WebappDaoFactory {
transient private PropertyGroupDao filteringPropertyGroupDao=null;
transient private PropertyInstanceDao filteringPropertyInstanceDao=null;
public WebappDaoFactoryFiltering( WebappDaoFactory innerDao, VitroFilters filters){
public WebappDaoFactoryFiltering(WebappDaoFactory innerDao, VitroFilters filters){
if( innerDao == null )
throw new Error("innerWebappDaoFactory must be non-null");
this.filters = filters;
@ -276,4 +277,9 @@ public class WebappDaoFactoryFiltering implements WebappDaoFactory {
public void close() {
innerWebappDaoFactory.close();
}
@Override
public I18nBundle getI18nBundle() {
return innerWebappDaoFactory.getI18nBundle();
}
}

View file

@ -83,22 +83,21 @@ public class ApplicationDaoJena extends JenaBaseDao implements ApplicationDao {
}
ontModel.enterCriticalSection(Lock.WRITE);
try {
appInd.setLabel(application.getApplicationName(), null);
updatePropertyStringValue(
appInd, APPLICATION_ABOUTTEXT, application.getAboutText(),
ontModel);
updatePropertyStringValue(
updateRDFSLabel(appInd, application.getApplicationName());
updatePlainLiteralValue(
appInd, APPLICATION_ABOUTTEXT, application.getAboutText());
updatePlainLiteralValue(
appInd, APPLICATION_ACKNOWLEGETEXT,
application.getAcknowledgeText(), ontModel);
application.getAcknowledgeText());
updatePropertyStringValue(
appInd, APPLICATION_CONTACTMAIL,
application.getContactMail(), ontModel);
updatePropertyStringValue(
appInd, APPLICATION_CORRECTIONMAIL,
application.getCorrectionMail(), ontModel);
updatePropertyStringValue(
updatePlainLiteralValue(
appInd, APPLICATION_COPYRIGHTANCHOR,
application.getCopyrightAnchor(), ontModel);
application.getCopyrightAnchor());
updatePropertyStringValue(
appInd, APPLICATION_COPYRIGHTURL,
application.getCopyrightURL(), ontModel);

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@ -516,9 +516,9 @@ public class DataPropertyDaoJena extends PropertyDaoJena implements
if (dtp.getFunctional()) {
ontModel.add(jDataprop,RDF.type,OWL.FunctionalProperty);
}
addPropertyStringValue(jDataprop, EXAMPLE, dtp.getExample(), ontModel);
addPropertyStringValue(jDataprop, DESCRIPTION_ANNOT, dtp.getDescription(), ontModel);
addPropertyStringValue(jDataprop, PUBLIC_DESCRIPTION_ANNOT, dtp.getPublicDescription(), ontModel);
updatePlainLiteralValue(jDataprop, EXAMPLE, dtp.getExample());
updatePlainLiteralValue(jDataprop, DESCRIPTION_ANNOT, dtp.getDescription());
updatePlainLiteralValue(jDataprop, PUBLIC_DESCRIPTION_ANNOT, dtp.getPublicDescription());
addPropertyStringValue(jDataprop, EDITING, dtp.getEditing(), ontModel);
addPropertyNonNegativeIntValue(jDataprop, DISPLAY_RANK_ANNOT, dtp.getDisplayTier(), ontModel);
addPropertyNonNegativeIntValue(jDataprop, DISPLAY_LIMIT, dtp.getDisplayLimit(), ontModel);
@ -587,9 +587,9 @@ public class DataPropertyDaoJena extends PropertyDaoJena implements
}
}
updatePropertyStringValue(jDataprop, EXAMPLE, dtp.getExample(), ontModel);
updatePropertyStringValue(jDataprop, DESCRIPTION_ANNOT, dtp.getDescription(), ontModel);
updatePropertyStringValue(jDataprop, PUBLIC_DESCRIPTION_ANNOT, dtp.getPublicDescription(), ontModel);
updatePlainLiteralValue(jDataprop, EXAMPLE, dtp.getExample());
updatePlainLiteralValue(jDataprop, DESCRIPTION_ANNOT, dtp.getDescription());
updatePlainLiteralValue(jDataprop, PUBLIC_DESCRIPTION_ANNOT, dtp.getPublicDescription());
updatePropertyStringValue(jDataprop, EDITING, dtp.getEditing(), ontModel);
updatePropertyNonNegativeIntValue(jDataprop, DISPLAY_RANK_ANNOT, dtp.getDisplayTier(), ontModel);
updatePropertyNonNegativeIntValue(jDataprop, DISPLAY_LIMIT, dtp.getDisplayLimit(), ontModel);

View file

@ -230,10 +230,9 @@ public class FauxPropertyDaoJena extends JenaBaseDao implements FauxPropertyDao
OBJECT_PROPERTY_DISPLAY_CONFIG);
addPropertyResourceURINotEmpty(config, PROPERTY_GROUP,
fp.getGroupURI());
addPropertyStringValue(config, DISPLAY_NAME, fp.getDisplayName(),
displayModel);
addPropertyStringValue(config, PUBLIC_DESCRIPTION_ANNOT,
fp.getPublicDescription(), displayModel);
updatePlainLiteralValue(config, DISPLAY_NAME, fp.getDisplayName());
updatePlainLiteralValue(config, PUBLIC_DESCRIPTION_ANNOT,
fp.getPublicDescription());
addPropertyIntValue(config, DISPLAY_RANK_ANNOT,
fp.getDisplayTier(), displayModel);
addPropertyIntValue(config, DISPLAY_LIMIT, fp.getDisplayLimit(),
@ -328,10 +327,10 @@ public class FauxPropertyDaoJena extends JenaBaseDao implements FauxPropertyDao
.getConfigUri());
updatePropertyResourceURIValue(config, PROPERTY_GROUP,
fp.getGroupURI());
updatePropertyStringValue(config, DISPLAY_NAME,
fp.getDisplayName(), displayModel);
updatePropertyStringValue(config, PUBLIC_DESCRIPTION_ANNOT,
fp.getPublicDescription(), displayModel);
updatePlainLiteralValue(config, DISPLAY_NAME,
fp.getDisplayName());
updatePlainLiteralValue(config, PUBLIC_DESCRIPTION_ANNOT,
fp.getPublicDescription());
updatePropertyIntValue(config, DISPLAY_RANK_ANNOT,
fp.getDisplayTier(), displayModel);
updatePropertyIntValue(config, DISPLAY_LIMIT, fp.getDisplayLimit(),

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@ -5,8 +5,8 @@ package edu.cornell.mannlib.vitro.webapp.dao.jena;
import java.text.DateFormat;
import java.text.SimpleDateFormat;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.Date;
import java.util.HashSet;
@ -14,14 +14,14 @@ import java.util.Iterator;
import java.util.List;
import java.util.Set;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.iri.IRI;
import org.apache.jena.iri.IRIFactory;
import org.apache.jena.datatypes.xsd.XSDDatatype;
import org.apache.jena.graph.Node;
import org.apache.jena.graph.NodeFactory;
import org.apache.jena.iri.IRI;
import org.apache.jena.iri.IRIFactory;
import org.apache.jena.ontology.DatatypeProperty;
import org.apache.jena.ontology.ObjectProperty;
import org.apache.jena.ontology.OntClass;
@ -39,6 +39,7 @@ import org.apache.jena.rdf.model.NodeIterator;
import org.apache.jena.rdf.model.Property;
import org.apache.jena.rdf.model.RDFNode;
import org.apache.jena.rdf.model.Resource;
import org.apache.jena.rdf.model.ResourceFactory;
import org.apache.jena.rdf.model.Statement;
import org.apache.jena.rdf.model.StmtIterator;
import org.apache.jena.shared.Lock;
@ -752,22 +753,111 @@ public class JenaBaseDao extends JenaBaseDaoCon {
}
}
}
/**
* Add to an OntResource an rdfs:label value with lexical form and default
* language tag. Remove any other existing values in default language.
* If lexicalForm parameter is null, remove all plain literal values of
* Property in default language.
* @param ontRes may not be null
* @param lexicalForm may be null. If null, existing values will be deleted
* but none will be added.
*/
protected void updateRDFSLabel(OntResource ontRes, String lexicalForm) {
updatePlainLiteralValue(ontRes, RDFS.label, lexicalForm);
}
/**
* Add to an OntResource an rdfs:label value with lexical form and optional
* language tag. Remove any other existing plain literal values that match
* specified language or lack language tags if no language is supplied.
* If lexicalForm parameter is null, remove all plain literal labels in
* specified language, or all existing language-less labels
* if no language is specified.
* @param ontRes may not be null
* @param lexicalForm may be null. If null, existing values will be deleted
* but none will be added.
* @param lang may be null. If null, method acts on language-less plain
* literal labels and ignores those with language tags.
*/
protected void updateRDFSLabel(OntResource ontRes, String lexicalForm, String lang) {
updatePlainLiteralValue(ontRes, RDFS.label, lexicalForm, lang);
}
/**
* convenience method for updating the RDFS label
* Add to an OntResource a Property value with lexical form and default
* language tag. Remove any other existing values in default language.
* If lexicalForm parameter is null, remove all plain literal values of
* Property in default language.
* @param ontRes may not be null
* @param lexicalForm may be null. If null, existing values will be deleted
* but none will be added.
*/
protected void updateRDFSLabel(OntResource ontRes, String label) {
if (label != null && label.length() > 0) {
String existingValue = ontRes.getLabel(getDefaultLanguage());
if (existingValue == null || !existingValue.equals(label)) {
ontRes.setLabel(label, getDefaultLanguage());
}
} else {
ontRes.removeAll(RDFS.label);
}
protected void updatePlainLiteralValue(OntResource ontRes, Property property,
String lexicalForm) {
updatePlainLiteralValue(ontRes, property, lexicalForm, getDefaultLanguage());
}
/**
* Add to an OntResource a Property value with lexical form and optional
* language tag. Remove any other existing plain literal values that match
* specified language or lack language tags if no language is supplied.
* If lexicalForm parameter is null, remove all plain literal values of
* Property in specified language, or all existing language-less literals
* if no language is specified.
* @param ontRes may not be null
* @param lexicalForm may be null. If null, existing values will be deleted
* but none will be added.
* @param lang may be null. If null, method acts on language-less
* plain literal values and ignores those with language tags.
*/
protected void updatePlainLiteralValue(OntResource ontRes, Property property,
String lexicalForm, String lang) {
if(ontRes == null) {
throw new IllegalArgumentException("ontRes may not be null.");
}
boolean addNew = true;
List<Statement> toRemove = new ArrayList<Statement>();
StmtIterator existingStmts = ontRes.listProperties(property);
while(existingStmts.hasNext()) {
Statement stmt = existingStmts.next();
if(stmt.getObject().isLiteral()) {
Literal lit = stmt.getObject().asLiteral();
if( (lang == null && isLanguageLessPlainLiteral(lit))
|| (lang != null && lang.equals(lit.getLanguage())) ) {
if(!lit.getLexicalForm().equals(lexicalForm)) {
toRemove.add(stmt);
} else {
// New literal already exists in the model.
// Do not add it again.
addNew = false;
}
}
}
}
if(!toRemove.isEmpty()) {
ontRes.getModel().remove(toRemove);
}
if (addNew && (lexicalForm != null)) {
if(!StringUtils.isEmpty(lang)) {
ontRes.addProperty(property, ResourceFactory.createLangLiteral(
lexicalForm, lang));
} else {
ontRes.addProperty(property, ResourceFactory.createPlainLiteral(
lexicalForm));
}
}
}
private boolean isLanguageLessPlainLiteral(Literal lit) {
// In RDF 1.1 all the language-less literals get datatype xsd:string.
// The null datatype check is here just in case this gets run on an older
// version of Jena. rdf:PlainLiteral is also a datatype, but doesn't
// (yet) seem to be used by Jena.
return StringUtils.isEmpty(lit.getLanguage())
&& ((lit.getDatatype() == null)
|| XSDDatatype.XSDstring.equals(lit.getDatatype()) ||
(RDF.getURI() + "PlainLiteral").equals(lit.getDatatypeURI()));
}
private Literal getLabel(String lang, List<RDFNode>labelList) {
@ -780,6 +870,13 @@ public class JenaBaseDao extends JenaBaseDaoCon {
}
if ((lang != null) && (lang.equals(labelLanguage))) {
return labelLit;
} else
/*
* UQAM-Linguistic-Management
* Check for country-part of lang (ex: 'en' for default consideration of labelLanguage in english but not encoded by 'en-US' most case of labels in vivo.owl)
*/
if ((lang != null) && (Arrays.asList(lang.split("-")).get(0).equals(labelLanguage))) {
return labelLit;
}
}
}

View file

@ -121,6 +121,7 @@ public class JenaBaseDaoCon {
protected DatatypeProperty USERACCOUNT_LAST_LOGIN_TIME = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_LAST_LOGIN_TIME);
protected DatatypeProperty USERACCOUNT_STATUS = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_STATUS);
protected DatatypeProperty USERACCOUNT_PASSWORD_LINK_EXPIRES = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_PASSWORD_LINK_EXPIRES);
protected DatatypeProperty USERACCOUNT_EMAIL_KEY = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_EMAIL_KEY);
protected DatatypeProperty USERACCOUNT_PASSWORD_CHANGE_REQUIRED = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_PASSWORD_CHANGE_REQUIRED);
protected DatatypeProperty USERACCOUNT_EXTERNAL_AUTH_ID = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_EXTERNAL_AUTH_ID);
protected DatatypeProperty USERACCOUNT_EXTERNAL_AUTH_ONLY = _constModel.createDatatypeProperty(VitroVocabulary.USERACCOUNT_EXTERNAL_AUTH_ONLY);

View file

@ -72,6 +72,7 @@ public class MenuDaoJena extends JenaBaseDao implements MenuDao {
return getMenu( getOntModelSelector().getDisplayModel(), url );
}
@Override
public MainMenu getMainMenu( ServletRequest req, String url ) {
OntModel displayModel = LanguageFilteringUtils.wrapOntModelInALanguageFilter(getOntModelSelector().getDisplayModel(), req );
return getMenu(displayModel, url) ;

View file

@ -714,14 +714,14 @@ public class ObjectPropertyDaoJena extends PropertyDaoJena implements ObjectProp
}
}
updatePropertyStringValue(p,EXAMPLE_ANNOT,prop.getExample(),getOntModel());
updatePropertyStringValue(p,DESCRIPTION_ANNOT,prop.getDescription(),getOntModel());
updatePropertyStringValue(p,PUBLIC_DESCRIPTION_ANNOT,prop.getPublicDescription(),getOntModel());
updatePlainLiteralValue(p, EXAMPLE_ANNOT, prop.getExample());
updatePlainLiteralValue(p, DESCRIPTION_ANNOT, prop.getDescription());
updatePlainLiteralValue(p, PUBLIC_DESCRIPTION_ANNOT, prop.getPublicDescription());
updatePropertyNonNegativeIntegerValue(p,DISPLAY_LIMIT,prop.getDomainDisplayLimitInteger(),getOntModel());
updatePropertyStringValue(p,PROPERTY_ENTITYSORTDIRECTION,prop.getDomainEntitySortDirection(),getOntModel());
if (inv != null) {
updatePropertyStringValue(inv,EXAMPLE_ANNOT,prop.getExample(),getOntModel());
updatePropertyStringValue(inv,DESCRIPTION_ANNOT,prop.getDescription(),getOntModel());
updatePlainLiteralValue(inv, EXAMPLE_ANNOT, prop.getExample());
updatePlainLiteralValue(inv, DESCRIPTION_ANNOT, prop.getDescription());
updatePropertyNonNegativeIntegerValue(inv,DISPLAY_LIMIT,prop.getRangeDisplayLimitInteger(),getOntModel());
updatePropertyStringValue(inv,PROPERTY_ENTITYSORTDIRECTION,prop.getRangeEntitySortDirection(),getOntModel());
}

View file

@ -12,10 +12,10 @@ import java.util.function.Supplier;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.graph.Capabilities;
import org.apache.jena.graph.Graph;
import org.apache.jena.graph.GraphEventManager;
import org.apache.jena.graph.GraphListener;
import org.apache.jena.graph.GraphStatisticsHandler;
import org.apache.jena.graph.Node;
import org.apache.jena.graph.TransactionHandler;
@ -23,7 +23,6 @@ import org.apache.jena.graph.Triple;
import org.apache.jena.graph.impl.GraphWithPerform;
import org.apache.jena.graph.impl.SimpleEventManager;
import org.apache.jena.query.QuerySolution;
import org.apache.jena.rdf.listeners.StatementListener;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.ModelFactory;
import org.apache.jena.rdf.model.StmtIterator;
@ -290,10 +289,15 @@ public class RDFServiceGraph implements GraphWithPerform {
literalBuff.append("\"");
pyString(literalBuff, node.getLiteralLexicalForm());
literalBuff.append("\"");
if (node.getLiteralDatatypeURI() != null) {
literalBuff.append("^^<").append(node.getLiteralDatatypeURI()).append(">");
} else if (!StringUtils.isEmpty(node.getLiteralLanguage())) {
/*
* UQAM-Bug-Correction
* reversing the condition tests.
* It is important to prioritize the language typology test in order to exploit the linguistic context in testing the type of data
*/
if (!StringUtils.isEmpty(node.getLiteralLanguage())) {
literalBuff.append("@").append(node.getLiteralLanguage());
} else if (node.getLiteralDatatypeURI() != null) {
literalBuff.append("^^<").append(node.getLiteralDatatypeURI()).append(">");
}
return literalBuff.toString();
} else {
@ -404,7 +408,18 @@ public class RDFServiceGraph implements GraphWithPerform {
@Override
public GraphEventManager getEventManager() {
if (eventManager == null) {
eventManager = new SimpleEventManager(this);
eventManager = new SimpleEventManager() {
@Override
public void notifyEvent(Graph g, Object event) {
ChangeSet changeSet = rdfService.manufactureChangeSet();
changeSet.addPreChangeEvent(event);
try {
rdfService.changeSetUpdate(changeSet);
} catch (RDFServiceException e) {
throw new RuntimeException(e);
}
}
};
}
return eventManager;
}
@ -590,21 +605,7 @@ public class RDFServiceGraph implements GraphWithPerform {
}
public static Model createRDFServiceModel(final RDFServiceGraph g) {
Model m = VitroModelFactory.createModelForGraph(g);
m.register(new StatementListener() {
@Override
public void notifyEvent(Model m, Object event) {
ChangeSet changeSet = g.getRDFService().manufactureChangeSet();
changeSet.addPreChangeEvent(event);
try {
g.getRDFService().changeSetUpdate(changeSet);
} catch (RDFServiceException e) {
throw new RuntimeException(e);
}
}
});
return m;
return VitroModelFactory.createModelForGraph(g);
}
@Override

View file

@ -232,10 +232,10 @@ public class SparqlGraph implements GraphWithPerform {
literalBuff.append("\"");
pyString(literalBuff, node.getLiteralLexicalForm());
literalBuff.append("\"");
if (node.getLiteralDatatypeURI() != null) {
literalBuff.append("^^<").append(node.getLiteralDatatypeURI()).append(">");
} else if (!StringUtils.isEmpty(node.getLiteralLanguage())) {
if (!StringUtils.isEmpty(node.getLiteralLanguage())) {
literalBuff.append("@").append(node.getLiteralLanguage());
} else if (node.getLiteralDatatypeURI() != null) {
literalBuff.append("^^<").append(node.getLiteralDatatypeURI()).append(">");
}
return literalBuff.toString();
} else {

View file

@ -4,7 +4,6 @@ package edu.cornell.mannlib.vitro.webapp.dao.jena;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.List;
import java.util.Random;
@ -98,6 +97,8 @@ public class UserAccountsDaoJena extends JenaBaseDao implements UserAccountsDao
u.setOldPassword(getPropertyStringValue(r, USERACCOUNT_OLD_PASSWORD));
u.setPasswordLinkExpires(getPropertyLongValue(r,
USERACCOUNT_PASSWORD_LINK_EXPIRES));
u.setEmailKey(getPropertyStringValue(r,USERACCOUNT_EMAIL_KEY));
u.setPasswordChangeRequired(getPropertyBooleanValue(r,
USERACCOUNT_PASSWORD_CHANGE_REQUIRED));
u.setExternalAuthOnly(getPropertyBooleanValue(r,
@ -240,6 +241,8 @@ public class UserAccountsDaoJena extends JenaBaseDao implements UserAccountsDao
userAccount.getLoginCount(), model);
addPropertyLongValue(res, USERACCOUNT_LAST_LOGIN_TIME,
userAccount.getLastLoginTime(), model);
addPropertyStringValue(res, USERACCOUNT_EMAIL_KEY,
userAccount.getEmailKey(), model);
if (userAccount.getStatus() != null) {
addPropertyStringValue(res, USERACCOUNT_STATUS, userAccount
.getStatus().toString(), model);
@ -306,6 +309,8 @@ public class UserAccountsDaoJena extends JenaBaseDao implements UserAccountsDao
userAccount.getLoginCount(), model);
updatePropertyLongValue(res, USERACCOUNT_LAST_LOGIN_TIME,
userAccount.getLastLoginTime(), model);
updatePropertyStringValue(res, USERACCOUNT_EMAIL_KEY,
userAccount.getEmailKey(), model);
if (userAccount.getStatus() == null) {
updatePropertyStringValue(res, USERACCOUNT_STATUS, null, model);
} else {

View file

@ -2,6 +2,8 @@
package edu.cornell.mannlib.vitro.webapp.dao.jena;
import static java.lang.String.format;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashSet;
@ -60,15 +62,18 @@ import edu.cornell.mannlib.vitro.webapp.dao.OntologyDao;
import edu.cornell.mannlib.vitro.webapp.dao.VClassDao;
import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
import edu.cornell.mannlib.vitro.webapp.dao.jena.event.EditEvent;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import edu.cornell.mannlib.vitro.webapp.web.URLEncoder;
public class VClassDaoJena extends JenaBaseDao implements VClassDao {
protected static final Log log = LogFactory.getLog(VClassDaoJena.class);
private final I18nBundle i18n;
private boolean isUnderlyingStoreReasoned = false;
public VClassDaoJena(WebappDaoFactoryJena wadf, boolean isUnderlyingStoreReasoned) {
super(wadf);
this.i18n = wadf.getI18nBundle();
this.isUnderlyingStoreReasoned = isUnderlyingStoreReasoned;
}
@ -91,17 +96,19 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
Restriction rest = cls.asRestriction();
OntProperty onProperty = rest.getOnProperty();
StringBuilder labelStr = new StringBuilder();
labelStr.append("restriction on ").append(getLabelOrId(onProperty)).append(": ");
labelStr.append(format("%s ", i18n.text("restriction_on")))
.append(getLabelOrId(onProperty))
.append(": ");
if (rest.isAllValuesFromRestriction() || rest.isSomeValuesFromRestriction()) {
Resource fillerRes = null;
if (rest.isAllValuesFromRestriction()) {
AllValuesFromRestriction avfRest = rest.asAllValuesFromRestriction();
fillerRes = avfRest.getAllValuesFrom();
labelStr.append("all values from ");
labelStr.append(format("%s ", i18n.text("all_values_from")));
} else {
SomeValuesFromRestriction svfRest = rest.asSomeValuesFromRestriction();
fillerRes = svfRest.getSomeValuesFrom();
labelStr.append("some values from ");
labelStr.append(format("%s ", i18n.text("some_values_from")));
}
if (fillerRes.canAs(OntClass.class)) {
OntClass avf = fillerRes.as(OntClass.class);
@ -115,7 +122,7 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
}
} else if (rest.isHasValueRestriction()) {
HasValueRestriction hvRest = rest.asHasValueRestriction();
labelStr.append("has value ");
labelStr.append(format("%s ", i18n.text("has_value")));
RDFNode fillerNode = hvRest.getHasValue();
try {
if (fillerNode.isResource()) {
@ -128,22 +135,22 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
}
} else if (rest.isMinCardinalityRestriction()) {
MinCardinalityRestriction mcRest = rest.asMinCardinalityRestriction();
labelStr.append("minimum cardinality ");
labelStr.append(format("%s ", i18n.text("minimum_cardinality")));
labelStr.append(mcRest.getMinCardinality());
} else if (rest.isMaxCardinalityRestriction()) {
MaxCardinalityRestriction mcRest = rest.asMaxCardinalityRestriction();
labelStr.append("maximum cardinality ");
labelStr.append(format("%s ", i18n.text("maximum_cardinality")));
labelStr.append(mcRest.getMaxCardinality());
} else if (rest.isCardinalityRestriction()) {
CardinalityRestriction cRest = rest.asCardinalityRestriction();
labelStr.append("cardinality ");
labelStr.append(format("%s ", i18n.text("cardinality")));
labelStr.append(cRest.getCardinality());
}
return labelStr.toString();
} else if (isBooleanClassExpression(cls)) {
StringBuilder labelStr = new StringBuilder("(");
if (cls.isComplementClass()) {
labelStr.append("not ");
labelStr.append(format("%s ", i18n.text("not")));
ComplementClass ccls = cls.as(ComplementClass.class);
labelStr.append(getLabelForClass(ccls.getOperand(), withPrefix, forPickList));
} else if (cls.isIntersectionClass()) {
@ -153,7 +160,7 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
OntClass operand = operandIt.next();
labelStr.append(getLabelForClass(operand, withPrefix, forPickList));
if (operandIt.hasNext()) {
labelStr.append(" and ");
labelStr.append(format(" %s ", i18n.text("and")));
}
}
} else if (cls.isUnionClass()) {
@ -163,7 +170,7 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
OntClass operand = operandIt.next();
labelStr.append(getLabelForClass(operand, withPrefix, forPickList));
if (operandIt.hasNext()) {
labelStr.append(" or ");
labelStr.append(format(" %s ", i18n.text("or")));
}
}
}
@ -952,9 +959,9 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
} catch (Exception e) {
log.error("error linking class "+cls.getURI()+" to class group");
}
addPropertyStringValue(ontCls,SHORTDEF,cls.getShortDef(),ontModel);
addPropertyStringValue(ontCls,EXAMPLE_ANNOT,cls.getExample(),ontModel);
addPropertyStringValue(ontCls,DESCRIPTION_ANNOT,cls.getDescription(),ontModel);
updatePlainLiteralValue(ontCls, SHORTDEF, cls.getShortDef());
updatePlainLiteralValue(ontCls, EXAMPLE_ANNOT, cls.getExample());
updatePlainLiteralValue(ontCls, DESCRIPTION_ANNOT, cls.getDescription());
addPropertyIntValue(ontCls,DISPLAY_LIMIT,cls.getDisplayLimit(),ontModel);
addPropertyIntValue(ontCls,DISPLAY_RANK_ANNOT,cls.getDisplayRank(),ontModel);
@ -1011,9 +1018,9 @@ public class VClassDaoJena extends JenaBaseDao implements VClassDao {
if (ontCls != null) {
updateRDFSLabel(ontCls, cls.getName());
updatePropertyResourceURIValue(ontCls,IN_CLASSGROUP,cls.getGroupURI(),ontModel);
updatePropertyStringValue(ontCls,SHORTDEF,cls.getShortDef(),ontModel);
updatePropertyStringValue(ontCls,EXAMPLE_ANNOT,cls.getExample(),ontModel);
updatePropertyStringValue(ontCls,DESCRIPTION_ANNOT,cls.getDescription(),ontModel);
updatePlainLiteralValue(ontCls, SHORTDEF, cls.getShortDef());
updatePlainLiteralValue(ontCls, EXAMPLE_ANNOT, cls.getExample());
updatePlainLiteralValue(ontCls, DESCRIPTION_ANNOT, cls.getDescription());
updatePropertyNonNegativeIntValue(ontCls,DISPLAY_LIMIT,cls.getDisplayLimit(),ontModel);
updatePropertyNonNegativeIntValue(ontCls,DISPLAY_RANK_ANNOT,cls.getDisplayRank(),ontModel);
updatePropertyFloatValue(ontCls, SEARCH_BOOST_ANNOT, cls.getSearchBoost(), ontModel);

View file

@ -276,7 +276,7 @@ public class VClassGroupDaoJena extends JenaBaseDao implements VClassGroupDao {
try {
Individual groupInd = ontModel.getIndividual(vcg.getURI());
try {
groupInd.setLabel(vcg.getPublicName(), getDefaultLanguage());
updateRDFSLabel(groupInd, vcg.getPublicName(), getDefaultLanguage());
} catch (Exception e) {
log.error("error updating name for "+groupInd.getURI());
}

View file

@ -50,6 +50,8 @@ import edu.cornell.mannlib.vitro.webapp.dao.VClassGroupDao;
import edu.cornell.mannlib.vitro.webapp.dao.VitroVocabulary;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactoryConfig;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames;
import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.jena.model.RDFServiceModel;
@ -611,5 +613,10 @@ public class WebappDaoFactoryJena implements WebappDaoFactory {
}
}
@Override
public I18nBundle getI18nBundle() {
// return context based bundle for preferred locales
return I18n.bundle(config.getPreferredLocales());
}
}

View file

@ -132,6 +132,11 @@ public class EditLiteral implements Literal {
throw new UnsupportedOperationException();
}
@Override
public boolean isStmtResource() {
throw new UnsupportedOperationException();
}
public Literal inModel(Model model) {
throw new UnsupportedOperationException();
}

View file

@ -4,7 +4,6 @@ package edu.cornell.mannlib.vitro.webapp.edit.listener.impl;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.Map;
import org.apache.commons.logging.Log;

View file

@ -24,15 +24,25 @@ import edu.cornell.mannlib.vitro.webapp.beans.Datatype;
import edu.cornell.mannlib.vitro.webapp.dao.jena.DatatypeDaoJena;
import edu.cornell.mannlib.vitro.webapp.dao.jena.WebappDaoFactoryJena;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields.FieldVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public class BasicValidationVTwo {
public final static String REQUIRED_FIELD_EMPTY_MSG = "required_field_empty_msg";
public final static String DATA_NOT_PAST_MSG = "data_not_past_msg";
public final static String INVALID_DATE_FORM_MSG = "invalid_date_form_msg";
public final static String FILE_MUST_BE_ENTERED_MSG = "file_must_be_entered_msg";
public final static String INVALID_URL_MSG = "invalid_url_msg";
private I18nBundle i18n;
Map<String, List<String>> varsToValidations;
EditConfigurationVTwo editConfig;
public BasicValidationVTwo(EditConfigurationVTwo editConfig, MultiValueEditSubmission editSub){
public BasicValidationVTwo(EditConfigurationVTwo editConfig, I18nBundle i18n){
this.editConfig = editConfig;
this.i18n = i18n;
Map<String,List<String>> validatorsForFields = new HashMap<String,List<String>>();
for(String fieldName: editConfig.getFields().keySet()){
FieldVTwo field = editConfig.getField(fieldName);
@ -42,8 +52,9 @@ public class BasicValidationVTwo {
checkValidations();
}
public BasicValidationVTwo(Map<String, List<String>> varsToValidations){
public BasicValidationVTwo(Map<String, List<String>> varsToValidations, I18nBundle i18n){
this.varsToValidations = varsToValidations;
this.i18n = i18n;
checkValidations();
}
@ -94,7 +105,7 @@ public class BasicValidationVTwo {
//If no literals and this field was required, this is an error message
//and can return
if((literals == null || literals.size() == 0) && isRequiredField) {
errors.put(name, REQUIRED_FIELD_EMPTY_MSG);
errors.put(name, i18n.text(REQUIRED_FIELD_EMPTY_MSG));
break;
}
//Loop through literals if literals exist
@ -113,7 +124,7 @@ public class BasicValidationVTwo {
// incorrectly generate errors.
if (isEmpty(value)) {
if (isRequiredField) {
errors.put(name, REQUIRED_FIELD_EMPTY_MSG);
errors.put(name, i18n.text(REQUIRED_FIELD_EMPTY_MSG));
}
break;
}
@ -154,11 +165,11 @@ public class BasicValidationVTwo {
private String validate(String validationType, List<FileItem> fileItems) {
if( "nonempty".equalsIgnoreCase(validationType)){
if( fileItems == null || fileItems.size() == 0 ){
return "a file must be entered for this field.";
return i18n.text(FILE_MUST_BE_ENTERED_MSG);
}else{
FileItem fileItem = fileItems.get(0);
if( fileItem == null || fileItem.getName() == null || fileItem.getName().length() < 1 || fileItem.getSize() < 0){
return "a file must be entered for this field.";
return i18n.text(FILE_MUST_BE_ENTERED_MSG);
}
}
}
@ -174,14 +185,14 @@ public class BasicValidationVTwo {
// This case may be needed for validation of other field types.
if( "nonempty".equalsIgnoreCase(validationType)){
if( isEmpty(value) )
return REQUIRED_FIELD_EMPTY_MSG;
return i18n.text(REQUIRED_FIELD_EMPTY_MSG);
}
// Format validation
else if("isDate".equalsIgnoreCase(validationType)){
if( isDate( value))
return SUCCESS;
else
return "must be in valid date format mm/dd/yyyy.";
return i18n.text(INVALID_DATE_FORM_MSG);
}
else if( validationType.indexOf("datatype:") == 0 ) {
String datatypeURI = validationType.substring(9);
@ -194,7 +205,7 @@ public class BasicValidationVTwo {
} else if ("httpUrl".equalsIgnoreCase(validationType)){
//check if it has http or https, we could do more but for now this is all.
if(! value.startsWith("http://") && ! value.startsWith("https://") ){
return "This URL must start with http:// or https://";
return i18n.text(INVALID_URL_MSG);
}else{
return SUCCESS;
}
@ -216,7 +227,7 @@ public class BasicValidationVTwo {
dayParamStr = value.substring(monthDash + 1, value.length());
inputC.set(Integer.parseInt(yearParamStr), Integer.parseInt(monthParamStr) - 1, Integer.parseInt(dayParamStr));
if(inputC.before(c)) {
return this.DATE_NOT_PAST_MSG;
return i18n.text(DATA_NOT_PAST_MSG);
//Returning null makes the error message "field is empty" display instead
//return null;
} else {
@ -278,14 +289,9 @@ public class BasicValidationVTwo {
return (value == null || value.trim().length() == 0);
}
private static Pattern urlRX = Pattern.compile("(([a-zA-Z][0-9a-zA-Z+\\-\\.]*:)/{0,2}[0-9a-zA-Z;/?:@&=+$\\.\\-_!~*'()%]+)(#[0-9a-zA-Z;/?:@&=+$\\.\\-_!~*'()%]+)?");
/** we use null to indicate success */
public final static String SUCCESS = null;
public final static String REQUIRED_FIELD_EMPTY_MSG = "This field must not be empty.";
public final static String DATE_NOT_PAST_MSG = "Please enter a future target date for publication (past dates are invalid).";
//public final static String MIN_FIELDS_NOT_POPULATED = "Please enter values for at least ";
//public final static String FORM_ERROR_FIELD_ID = "formannotationerrors";
/** regex for strings like "12/31/2004" */

View file

@ -28,6 +28,7 @@ import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields.FieldVTwo;
import edu.cornell.mannlib.vitro.webapp.freemarker.config.FreemarkerConfiguration;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.LanguageOption;
import freemarker.template.Configuration;
public class EditConfigurationUtils {
@ -61,18 +62,24 @@ public class EditConfigurationUtils {
return vreq.getParameter("rangeUri");
}
public static String getTypeOfNew(VitroRequest vreq) {
return vreq.getParameter("typeOfNew");
}
public static VClass getRangeVClass(VitroRequest vreq) {
// This needs a WebappDaoFactory with no filtering/RDFService
// funny business because it needs to be able to retrieve anonymous union
// classes by their "pseudo-bnode URIs".
// Someday we'll need to figure out a different way of doing this.
WebappDaoFactory ctxDaoFact = ModelAccess.on(
vreq.getSession().getServletContext()).getWebappDaoFactory();
return ctxDaoFact.getVClassDao().getVClassByURI(getRangeUri(vreq));
}
public static VClass getLangAwardRangeVClass(VitroRequest vreq) {
// UQAM-Linguistic-Management
WebappDaoFactory vreqDaoFact = ModelAccess.on(vreq).getWebappDaoFactory(
LanguageOption.LANGUAGE_AWARE);
return vreqDaoFact.getVClassDao().getVClassByURI(getRangeUri(vreq));
}
//get individual
public static Individual getSubjectIndividual(VitroRequest vreq) {
Individual subject = null;
String subjectUri = getSubjectUri(vreq);
@ -122,12 +129,24 @@ public class EditConfigurationUtils {
public static ObjectProperty getObjectPropertyForPredicate(VitroRequest vreq,
String predicateUri, String domainUri, String rangeUri) {
WebappDaoFactory wdf = vreq.getWebappDaoFactory();
// WebappDaoFactory wdf = vreq.getWebappDaoFactory();
// UQAM-Linguistic-Management Use linguistic context
WebappDaoFactory wdf = ModelAccess.on(vreq).getWebappDaoFactory(LanguageOption.LANGUAGE_AWARE);
ObjectProperty objectProp = wdf.getObjectPropertyDao().getObjectPropertyByURIs(
predicateUri, domainUri, rangeUri);
return objectProp;
}
// UQAM Use linguistic context
public static ObjectProperty getObjectPropertyForPredicateLangAware(VitroRequest vreq,
String predicateUri, String domainUri, String rangeUri) {
// WebappDaoFactory wdf = vreq.getWebappDaoFactory();
// UQAM Use linguistic context
WebappDaoFactory wdf = ModelAccess.on(vreq).getWebappDaoFactory(LanguageOption.LANGUAGE_AWARE);
ObjectProperty objectProp = wdf.getObjectPropertyDao().getObjectPropertyByURIs(
predicateUri, domainUri, rangeUri);
return objectProp;
}
public static DataProperty getDataPropertyForPredicate(VitroRequest vreq, String predicateUri) {
WebappDaoFactory wdf = vreq.getWebappDaoFactory();
//TODO: Check reason for employing unfiltered webapp dao factory and note if using a different version
@ -205,6 +224,7 @@ public class EditConfigurationUtils {
return (op != null && dp == null);
}
private static boolean isVitroLabel(String predicateUri) {
return predicateUri.equals(VitroVocabulary.LABEL);
}

View file

@ -366,6 +366,8 @@ public class EditN3GeneratorVTwo {
{
sbuff.append("@") ;
sbuff.append(lang) ;
// added by UQAM to exit at this point without adding datatype
return sbuff.toString() ;
}
// Format the datatype

View file

@ -10,23 +10,23 @@ import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.apache.commons.fileupload.FileItem;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.lang3.builder.ToStringBuilder;
import org.apache.commons.lang3.builder.ToStringStyle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.joda.time.format.DateTimeFormat;
import org.joda.time.format.DateTimeFormatter;
import org.apache.jena.rdf.model.Literal;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.ModelFactory;
import org.apache.jena.rdf.model.ResourceFactory;
import org.apache.jena.vocabulary.XSD;
import org.apache.jena.vocabulary.RDF;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.edit.EditLiteral;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields.FieldVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
public class MultiValueEditSubmission {
@ -34,21 +34,31 @@ public class MultiValueEditSubmission {
private Map<String,List<Literal>> literalsFromForm ;
private Map<String,List<String>> urisFromForm ;
private Map<String,String> validationErrors;
private BasicValidationVTwo basicValidation;
private Map<String, List<FileItem>> filesFromForm;
private static Model literalCreationModel;
private String entityToReturnTo;
private VitroRequest _vreq;
private static final String TIME_URI = XSD.time.getURI();
static{
literalCreationModel = ModelFactory.createDefaultModel();
}
public MultiValueEditSubmission(Map<String,String[]> queryParameters, EditConfigurationVTwo editConfig){
/*
* UQAM
* replace
* public MultiValueEditSubmission(Map<String,String[]> queryParameters, EditConfigurationVTwo editConfig)
* by this new signature
* This affect PostEditCleanupController and ProcessRdfFormController classes.
* This replacement is justified by the fact that we need a linguistic context in this class.
*/
public MultiValueEditSubmission(VitroRequest vreq, EditConfigurationVTwo editConfig){
// UQAM add this both lines
_vreq = vreq;
Map<String,String[]> queryParameters = vreq.getParameterMap();
if( editConfig == null )
throw new Error("EditSubmission needs an EditConfiguration");
this.editKey = editConfig.getEditKey();
@ -92,11 +102,12 @@ public class MultiValueEditSubmission {
processEditElementFields(editConfig,queryParameters);
//Incorporating basic validation
//Validate URIS
this.basicValidation = new BasicValidationVTwo(editConfig, this);
this.basicValidation = new BasicValidationVTwo(editConfig, I18n.bundle(vreq));
Map<String,String> errors = basicValidation.validateUris( urisFromForm );
//Validate literals and add errors to the list of existing errors
errors.putAll(basicValidation.validateLiterals( literalsFromForm ));
if( errors != null ) {
// UQAM Add empty contition
if( errors != null && !errors.isEmpty()) {
validationErrors.putAll( errors);
}
@ -141,9 +152,8 @@ public class MultiValueEditSubmission {
}
}
}
/* maybe this could be static */
public Literal createLiteral(String value, String datatypeUri, String lang) {
public Literal createLiteral_ORIG(String value, String datatypeUri, String lang) {
if( datatypeUri != null ){
if( "http://www.w3.org/2001/XMLSchema:anyURI".equals(datatypeUri) ){
try {
@ -159,12 +169,27 @@ public class MultiValueEditSubmission {
return ResourceFactory.createPlainLiteral(value);
}
private static final String DATE_TIME_URI = XSD.dateTime.getURI();
private static final String DATE_URI = XSD.date.getURI();
private static final String TIME_URI = XSD.time.getURI();
private static DateTimeFormatter dformater = DateTimeFormat.forPattern("yyyy-MM-dd'T'HH:mm:00");
private static DateTimeFormatter dateFormater = DateTimeFormat.forPattern("yyyy-MM-dd");
/* maybe this could be static */
public Literal createLiteral(String value, String datatypeUri, String lang) {
if( datatypeUri != null && !datatypeUri.isEmpty() ){
// UQAM Original code contained tow-dots ':' in place of '#'
// if( "http://www.w3.org/2001/XMLSchema:anyURI".equals(datatypeUri) ){
if( XSD.anyURI.getURI().equals(datatypeUri) ){
// try {
// return literalCreationModel.createTypedLiteral( URLEncoder.encode(value, "UTF8"), datatypeUri);
return literalCreationModel.createTypedLiteral( value, datatypeUri);
// } catch (UnsupportedEncodingException e) {
// log.error(e, e);
// }
} else if ( XSD.xstring.getURI().equals(datatypeUri) || RDF.dtLangString.getURI().equals(datatypeUri) ){
if( lang != null && lang.length() > 0 ) return ResourceFactory.createLangLiteral(value, lang);
}
return literalCreationModel.createTypedLiteral(value, datatypeUri);
// UQAM take into account the linguistic context
} else if( lang != null && lang.length() > 0 )
return ResourceFactory.createLangLiteral(value, lang);
return ResourceFactory.createPlainLiteral(value);
}
public Map<String,String> getValidationErrors(){
return validationErrors;
@ -264,12 +289,46 @@ public class MultiValueEditSubmission {
for(String value:valueList) {
value = N3EditUtils.stripInvalidXMLChars(value);
//Add to array of literals corresponding to this variable
/* UQAM OLD
if (!StringUtils.isEmpty(value)) {
literalsArray.add(createLiteral(
value,
field.getRangeDatatypeUri(),
field.getRangeLang()));
}
*/
/*
* UQAM Replaced by this to take the linguistic context into consideration.
*/
if (!StringUtils.isEmpty(value)) {
String rangeLang = field.getRangeLang(); //UQAM Default value
try {
if (_vreq != null ) {
// only if the request comes from the rdfsLabelGenerator the language should be used
Boolean getLabelLanguage = false;
if (!StringUtils.isBlank(editConfig.formUrl) && editConfig.formUrl.contains("RDFSLabelGenerator")) {
getLabelLanguage = true;
}
// if the language is set in the given Literal, this language-tag should be used and remain the same
// for example when you edit an label with an langauge-tag (no matter which language is selected globally)
if (!StringUtils.isBlank(editConfig.getLiteralsInScope().get("label").get(0).getLanguage()) && getLabelLanguage)
{
rangeLang = editConfig.getLiteralsInScope().get("label").get(0).getLanguage();
} else { // if the literal has no langauge-tag, use the language which is globally selected
rangeLang = _vreq.getLocale().getLanguage();
if (!_vreq.getLocale().getCountry().isEmpty()) {
rangeLang += "-" + _vreq.getLocale().getCountry();
}
}
}
} catch (Exception e) {
}
literalsArray.add(createLiteral(
value,
field.getRangeDatatypeUri(),
rangeLang));
}
}
literalsFromForm.put(var, literalsArray);

View file

@ -9,15 +9,24 @@ import java.util.HashMap;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.datatypes.xsd.XSDDatatype;
import org.apache.jena.ontology.OntModel;
import org.apache.jena.rdf.model.Literal;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.ModelFactory;
import org.apache.jena.rdf.model.Property;
import org.apache.jena.rdf.model.RDFNode;
import org.apache.jena.rdf.model.Resource;
import org.apache.jena.rdf.model.ResourceFactory;
import org.apache.jena.rdf.model.Statement;
import org.apache.jena.shared.Lock;
import org.apache.jena.vocabulary.RDF;
import org.apache.jena.vocabulary.XSD;
import org.apache.commons.lang3.StringUtils;
import edu.cornell.mannlib.vitro.webapp.controller.VitroRequest;
import edu.cornell.mannlib.vitro.webapp.dao.InsertException;
@ -41,6 +50,7 @@ public class ProcessRdfForm {
private EditN3GeneratorVTwo populator;
private Map<String,String> urisForNewResources = null;
// private VitroRequest _vreq;
/**
* Construct the ProcessRdfForm object.
*/
@ -76,9 +86,9 @@ public class ProcessRdfForm {
AdditionsAndRetractions changes;
if( configuration.isUpdate() ){
changes = editExistingStatements(configuration, submission);
changes = editExistingStatements(configuration, submission, vreq); //UQAM vreq for getting linguistic context
} else {
changes = createNewStatements(configuration, submission );
changes = createNewStatements(configuration, submission, vreq ); //UQAM vreq for getting linguistic context
}
changes = getMinimalChanges(changes);
@ -99,12 +109,15 @@ public class ProcessRdfForm {
* any optional N3 is to originally configure the
* configuration.setN3Optional() to be empty.
*
* UQAM add vreq for linguistic context managing
*
* @throws Exception May throw an exception if the required N3
* does not parse.
*
*/
private AdditionsAndRetractions createNewStatements(
EditConfigurationVTwo configuration,
MultiValueEditSubmission submission) throws Exception {
MultiValueEditSubmission submission, VitroRequest vreq) throws Exception {
log.debug("in createNewStatements()" );
//getN3Required and getN3Optional will return copies of the
@ -113,10 +126,10 @@ public class ProcessRdfForm {
List<String> optionalN3 = configuration.getN3Optional();
/* substitute in the form values and existing values */
subInValuesToN3( configuration, submission, requiredN3, optionalN3, null , null);
subInValuesToN3( configuration, submission, requiredN3, optionalN3, null , null, vreq);
/* parse N3 to RDF Models, No retractions since all of the statements are new. */
return parseN3ToChange(requiredN3, optionalN3, null, null);
return parseN3ToChange(requiredN3, optionalN3, null, null, vreq, null);
}
/* for a list of N3 strings, substitute in the subject, predicate and object URIs
@ -140,10 +153,12 @@ public class ProcessRdfForm {
* retractions are mutually diff'ed before statements are added to or
* removed from the model. The explicit change check can cause problems in
* more complex setups, like the automatic form building in DataStaR.
* @param vreq For getting linguistic context
*/
protected AdditionsAndRetractions editExistingStatements(
EditConfigurationVTwo editConfig,
MultiValueEditSubmission submission) throws Exception {
MultiValueEditSubmission submission, VitroRequest vreq) throws Exception {
log.debug("editing an existing resource: " + editConfig.getObject() );
@ -156,18 +171,18 @@ public class ProcessRdfForm {
subInValuesToN3(editConfig, submission,
N3RequiredAssert, N3OptionalAssert,
N3RequiredRetract, N3OptionalRetract);
N3RequiredRetract, N3OptionalRetract, vreq);
return parseN3ToChange(
N3RequiredAssert,N3OptionalAssert,
N3RequiredRetract, N3OptionalRetract);
N3RequiredRetract, N3OptionalRetract, vreq, editConfig);
}
@SuppressWarnings("unchecked")
protected void subInValuesToN3(
EditConfigurationVTwo editConfig, MultiValueEditSubmission submission,
List<String> requiredAsserts, List<String> optionalAsserts,
List<String> requiredRetracts, List<String> optionalRetracts ) throws InsertException{
List<String> requiredRetracts, List<String> optionalRetracts, VitroRequest vreq ) throws InsertException{
//need to substitute into the return to URL becase it may need new resource URIs
List<String> URLToReturnTo = Arrays.asList(submission.getEntityToReturnTo());
@ -184,7 +199,41 @@ public class ProcessRdfForm {
//Retractions does NOT get values from form.
/* ******** Form submission Literals *********** */
substituteInMultiLiterals( submission.getLiteralsFromForm(), requiredAsserts, optionalAsserts, URLToReturnTo);
/*
* UQAM Set all literals in the linguistic context
*/
Map<String, List<Literal>> literalsFromForm = submission.getLiteralsFromForm();
Set<String> keys = literalsFromForm.keySet();
for (String aKey : keys) {
List<Literal> literalFromForm = literalsFromForm.get(aKey);
List<Literal> newLiteralFromForm = new ArrayList<>();
for (Literal aLiteral : literalFromForm) {
if (aLiteral != null) {
String aLiteratDT = aLiteral.getDatatype().getURI();
Literal newLiteral = null;
String aText = aLiteral.getLexicalForm();
/*
* do it only if aLiteral are xstring datatype
*/
if (RDF.dtLangString.getURI().equals(aLiteratDT) && !aLiteral.getLanguage().isEmpty()) {
newLiteral = aLiteral;
}
else if (XSD.xstring.getURI().equals(aLiteratDT) || RDF.dtLangString.getURI().equals(aLiteratDT)) {
String lang = vreq.getLocale().getLanguage();
if (!vreq.getLocale().getCountry().isEmpty()) {
lang += "-" + vreq.getLocale().getCountry();
}
newLiteral = ResourceFactory.createLangLiteral(aText, lang);
} else {
newLiteral = ResourceFactory.createTypedLiteral(aText, aLiteral.getDatatype());
}
newLiteralFromForm.add(newLiteral);
}
}
literalsFromForm.replace(aKey, newLiteralFromForm);
}
substituteInMultiLiterals( literalsFromForm, requiredAsserts, optionalAsserts, URLToReturnTo);
logSubstitue( "Added form Literals", requiredAsserts, optionalAsserts, requiredRetracts, optionalRetracts);
//Retractions does NOT get values from form.
@ -254,20 +303,106 @@ public class ProcessRdfForm {
protected AdditionsAndRetractions parseN3ToChange(
List<String> requiredAdds, List<String> optionalAdds,
List<String> requiredDels, List<String> optionalDels) throws Exception{
List<String> requiredDels, List<String> optionalDels, VitroRequest vreq, EditConfigurationVTwo editConfig) throws Exception{
List<Model> adds = parseN3ToRDF(requiredAdds, REQUIRED);
adds.addAll( parseN3ToRDF(optionalAdds, OPTIONAL));
List<Model> retracts = new ArrayList<Model>();
if( requiredDels != null && optionalDels != null ){
retracts.addAll( parseN3ToRDF(requiredDels, REQUIRED) );
retracts.addAll( parseN3ToRDF(optionalDels, OPTIONAL) );
String lingCxt=null;
//UQAM Taking into account the linguistic context in retract
try {
// only if the request comes from the rdfsLabelGenerator the language should be used
Boolean getLabelLanguage = false;
if (!StringUtils.isBlank(editConfig.formUrl) && editConfig.formUrl.contains("RDFSLabelGenerator")) {
getLabelLanguage = true;
}
// if the language is set in the given Literal, this language-tag should be used and remain the same
// for example when you edit an label with an langauge-tag (no matter which language is selected globally)
if (editConfig != null && !StringUtils.isBlank(editConfig.getLiteralsInScope().get("label").get(0).getLanguage()) && getLabelLanguage) {
lingCxt = editConfig.getLiteralsInScope().get("label").get(0).getLanguage();
} else { // if the literal has no langauge-tag, use the language which is globally selected
lingCxt = vreq.getLocale().getLanguage();
if (!vreq.getLocale().getCountry().isEmpty()) {
lingCxt += "-" + vreq.getLocale().getCountry();
}
}
} catch (Exception e) {
}
retracts.addAll( parseN3ToRDF(requiredDels, REQUIRED, lingCxt) );
retracts.addAll( parseN3ToRDF(optionalDels, OPTIONAL, lingCxt) );
}
return new AdditionsAndRetractions(adds,retracts);
}
/**
* Parse the n3Strings to a List of RDF Model objects.
*
* @param n3Strings N3 Strings to parse
* @param parseType if OPTIONAL, then don't throw exceptions on errors
* @param linguisticContext For Literals, Making parse only if the literal linguisticContext are same than linguisticContext parameter //UQAM
* If REQUIRED, then throw exceptions on errors.
* @throws Exception
*/
protected static List<Model> parseN3ToRDF(
List<String> n3Strings, N3ParseType parseType, String linguisticContext ) throws Exception {
// Use non-linguistic version of this method if no linguisticContext is provided
if (linguisticContext == null) {
return parseN3ToRDF(n3Strings, parseType);
}
List<String> errorMessages = new ArrayList<String>();
List<Model> rdfModels = new ArrayList<Model>();
for(String n3 : n3Strings){
try{
Model model = ModelFactory.createDefaultModel();
StringReader reader = new StringReader(n3);
model.read(reader, "", "N3");
List<Statement> stmts = model.listStatements().toList();
for (Iterator iterator = stmts.iterator(); iterator.hasNext();) {
Statement stmt = (Statement) iterator.next();
Resource subj = stmt.getSubject();
Property pred = stmt.getPredicate();
RDFNode obj = stmt.getObject();
if (obj.isLiteral()) {
Literal lit = obj.asLiteral();
String lang = lit.getLanguage();
if (! linguisticContext.equals(lang)) {
//UQAM Remove if linguisticContext != lang of the Literal
model.remove(subj, pred, obj);
}
}
}
rdfModels.add( model );
}catch(Throwable t){
errorMessages.add(t.getMessage() + "\nN3: \n" + n3 + "\n");
}
}
StringBuilder errors = new StringBuilder();
for( String errorMsg : errorMessages){
errors.append(errorMsg).append('\n');
}
if( !errorMessages.isEmpty() ){
if( REQUIRED.equals(parseType) ){
throw new Exception("Errors processing required N3. The EditConfiguration should " +
"be setup so that if a submission passes validation, there will not be errors " +
"in the required N3.\n" + errors );
}else if( OPTIONAL.equals(parseType) ){
log.debug("Some Optional N3 did not parse, if a optional N3 does not parse it " +
"will be ignored. This allows optional parts of a form submission to " +
"remain unfilled out and then the optional N3 does not get values subsituted in from" +
"the form submission values. It may also be the case that there are unintentional " +
"syntax errors the optional N3." );
log.debug(errors.toString());
}
}
return rdfModels;
}
/**
* Parse the n3Strings to a List of RDF Model objects.
*
@ -479,4 +614,4 @@ public class ProcessRdfForm {
private static Log log = LogFactory.getLog(ProcessRdfForm.class);
}
}

View file

@ -7,6 +7,7 @@ import java.util.LinkedHashMap;
import java.util.List;
import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -40,7 +41,8 @@ public class ChildVClassesOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception{
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception{
// now create an empty HashMap to populate and return
HashMap <String,String> optionsMap = new LinkedHashMap<String,String>();

View file

@ -1,6 +1,6 @@
/* $This file is distributed under the terms of the license in LICENSE$ */
package edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields;
package edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields;
import java.util.Comparator;
import java.util.HashMap;
import java.util.LinkedHashMap;
@ -15,6 +15,7 @@ import edu.cornell.mannlib.vitro.webapp.beans.VClass;
import edu.cornell.mannlib.vitro.webapp.dao.VClassDao;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public class ChildVClassesWithParent implements FieldOptions {
@ -37,20 +38,24 @@ public class ChildVClassesWithParent implements FieldOptions {
return this;
}
@Override
/*
* UQAM-Linguistic-Management
* This method is polymorphism of getOptions(EditConfigurationVTwo editConfig,String fieldName, WebappDaoFactory wDaoFact)
* for the internationalization of word "other" in the scroling list of personHasAdvisorRelationship.ftl
*/
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception {
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception {
HashMap <String,String> optionsMap = new LinkedHashMap<String,String>();
// first test to see whether there's a default "leave blank" value specified with the literal options
if ( ! StringUtils.isEmpty( defaultOptionLabel ) ){
optionsMap.put(LEFT_BLANK, defaultOptionLabel);
}
optionsMap.put(classUri, "Other");
String other_i18n = i18n.text("other");
// first character in capital
optionsMap.put(classUri, other_i18n.substring(0, 1).toUpperCase() + other_i18n.substring(1));
VClassDao vclassDao = wDaoFact.getVClassDao();
List<String> subClassList = vclassDao.getAllSubClassURIs(classUri);
if (subClassList != null && subClassList.size() > 0) {

View file

@ -10,6 +10,7 @@ import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public class ConstantFieldOptions implements FieldOptions {
@ -54,7 +55,8 @@ public class ConstantFieldOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception {
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception {
// originally not auto-sorted but sorted now, and empty values not removed or replaced
HashMap <String,String> optionsMap = new LinkedHashMap<String,String>();

View file

@ -6,6 +6,7 @@ import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
/**
* Represents an object that can return a list of options
@ -28,7 +29,8 @@ public interface FieldOptions {
public Map<String,String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception;
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception;
/*
* Certain field options may have custom sorting requirements. If no sorting requirements exist,

View file

@ -6,6 +6,7 @@ import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public class IndividualsViaClassGroupOptions implements FieldOptions {
@ -27,7 +28,8 @@ public class IndividualsViaClassGroupOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception {
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception {
throw new Error("not implemented");
}

View file

@ -11,6 +11,7 @@ import java.util.Map;
import javax.servlet.http.HttpServletRequest;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -77,7 +78,8 @@ public class IndividualsViaObjectPropetyOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) {
WebappDaoFactory wDaoFact,
I18nBundle i18n) {
HashMap<String, String> optionsMap = new LinkedHashMap<String, String>();
int optionsCount = 0;

View file

@ -8,6 +8,7 @@ import java.util.List;
import java.util.ListIterator;
import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -90,7 +91,8 @@ public class IndividualsViaSearchQueryOptions extends IndividualsViaVClassOption
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception {
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception {
Map<String, Individual> individualMap = new HashMap<String, Individual>();

View file

@ -8,6 +8,7 @@ import java.util.HashMap;
import java.util.List;
import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -48,7 +49,8 @@ public class IndividualsViaVClassOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact) throws Exception {
WebappDaoFactory wDaoFact,
I18nBundle i18n) throws Exception {
Map<String, Individual> individualMap = new HashMap<String, Individual>();

View file

@ -9,6 +9,7 @@ import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.beans.VClass;
import edu.cornell.mannlib.vitro.webapp.dao.WebappDaoFactory;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTwo;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
public class RdfTypeOptions implements FieldOptions {
@ -29,7 +30,8 @@ public class RdfTypeOptions implements FieldOptions {
public Map<String, String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wdf) {
WebappDaoFactory wdf,
I18nBundle i18n) {
Map<String,String> uriToLabel = new HashMap<String,String>();
for (String uri : typeURIs) {

View file

@ -11,6 +11,8 @@ import java.util.LinkedHashMap;
import java.util.List;
import java.util.Map;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
import edu.cornell.mannlib.vitro.webapp.i18n.I18nBundle;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
@ -25,7 +27,8 @@ public class SelectListGeneratorVTwo {
public static Map<String,String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
WebappDaoFactory wDaoFact){
WebappDaoFactory wDaoFact,
I18nBundle i18n){
if( editConfig == null ){
@ -48,13 +51,51 @@ public class SelectListGeneratorVTwo {
}
try {
return field.getFieldOptions().getOptions(editConfig,fieldName,wDaoFact);
return field.getFieldOptions().getOptions(editConfig,fieldName,wDaoFact,i18n);
} catch (Exception e) {
log.error("Error runing getFieldOptionis()",e);
return Collections.emptyMap();
}
}
// UQAM Overcharge method for linguistic contexte processisng
// AWoods: This method appears to never be invoked.
public static Map<String,String> getOptions(
EditConfigurationVTwo editConfig,
String fieldName,
VitroRequest vreq){
if( editConfig == null ){
log.error( "fieldToSelectItemList() must be called with a non-null EditConfigurationVTwo ");
return Collections.emptyMap();
}
if( fieldName == null ){
log.error( "fieldToSelectItemList() must be called with a non-null fieldName");
return Collections.emptyMap();
}
FieldVTwo field = editConfig.getField(fieldName);
if (field==null) {
log.error("no field \""+fieldName+"\" found from editConfig.");
return Collections.emptyMap();
}
if( field.getFieldOptions() == null ){
return Collections.emptyMap();
}
try {
//UQAM need vreq instead of WebappDaoFactory
Map<String, String> parentClass = Collections.emptyMap();
FieldOptions fieldOptions = field.getFieldOptions();
return fieldOptions.getOptions(editConfig,fieldName,vreq.getWebappDaoFactory(), I18n.bundle(vreq));
} catch (Exception e) {
log.error("Error runing getFieldOptionis()",e);
return Collections.emptyMap();
}
}
//Methods to sort the options map
// from http://forum.java.sun.com/thread.jspa?threadID=639077&messageID=4250708

View file

@ -16,6 +16,7 @@ import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.EditConfigurationVTw
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.IdModelSelector;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.StandardModelSelector;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.LanguageOption;
public abstract class BaseEditConfigurationGenerator implements EditConfigurationGenerator {
@ -63,6 +64,7 @@ public abstract class BaseEditConfigurationGenerator implements EditConfiguratio
setupModelSelectorsFromVitroRequest(vreq, editConfig);
OntModel queryModel = ModelAccess.on(vreq).getOntModel();
OntModel languageNeutralModel = vreq.getLanguageNeutralUnionFullModel();
if( editConfig.getSubjectUri() == null)
editConfig.setSubjectUri( EditConfigurationUtils.getSubjectUri(vreq));
@ -78,7 +80,10 @@ public abstract class BaseEditConfigurationGenerator implements EditConfiguratio
editConfig.prepareForObjPropUpdate(queryModel);
} else if( dataKey != null ) { // edit of a data prop statement
//do nothing since the data prop form generator must take care of it
editConfig.prepareForDataPropUpdate(queryModel, vreq.getWebappDaoFactory().getDataPropertyDao());
// Use language-neutral model to ensure that a data property statement
// is found for any literal hash, even if the UI locale is changed.
editConfig.prepareForDataPropUpdate(languageNeutralModel,
vreq.getWebappDaoFactory().getDataPropertyDao());
} else{
//this might be a create new or a form
editConfig.prepareForNonUpdate(queryModel);

View file

@ -350,7 +350,7 @@ public class DefaultAddMissingIndividualFormGenerator implements EditConfigurati
private void prepareForUpdate(VitroRequest vreq, HttpSession session, EditConfigurationVTwo editConfiguration) {
//Here, retrieve model from
OntModel model = ModelAccess.on(session.getServletContext()).getOntModel();
OntModel model = ModelAccess.on(vreq).getOntModel();
//if object property
if(EditConfigurationUtils.isObjectProperty(EditConfigurationUtils.getPredicateUri(vreq), vreq)){
Individual objectIndividual = EditConfigurationUtils.getObjectIndividual(vreq);

View file

@ -28,7 +28,9 @@ public class DefaultDeleteGenerator extends BaseEditConfigurationGenerator imple
private Integer dataHash = 0;
private DataPropertyStatement dps = null;
private String dataLiteral = null;
private String template = "confirmDeletePropertyForm.ftl";
private String propertyTemplate = "confirmDeletePropertyForm.ftl";
private String individualTemplate = "confirmDeleteIndividualForm.ftl";
//In this case, simply return the edit configuration currently saved in session
//Since this is forwarding from another form, an edit configuration should already exist in session
@ -43,12 +45,32 @@ public class DefaultDeleteGenerator extends BaseEditConfigurationGenerator imple
if(editConfiguration == null) {
editConfiguration = setupEditConfiguration(vreq, session);
}
editConfiguration.setTemplate(template);
//prepare update?
prepare(vreq, editConfiguration);
if (editConfiguration.getPredicateUri() == null && editConfiguration.getSubjectUri() == null) {
editConfiguration.setTemplate(individualTemplate);
addDeleteParams(vreq, editConfiguration);
}else {
editConfiguration.setTemplate(propertyTemplate);
}
return editConfiguration;
}
private void addDeleteParams(VitroRequest vreq, EditConfigurationVTwo editConfiguration) {
String redirectUrl = vreq.getParameter("redirectUrl");
if (redirectUrl != null) {
editConfiguration.addFormSpecificData("redirectUrl", redirectUrl);
}
String individualName = vreq.getParameter("individualName");
if (redirectUrl != null) {
editConfiguration.addFormSpecificData("individualName", individualName);
}
String individualType = vreq.getParameter("individualType");
if (redirectUrl != null) {
editConfiguration.addFormSpecificData("individualType", individualType);
}
}
private EditConfigurationVTwo setupEditConfiguration(VitroRequest vreq, HttpSession session) {
EditConfigurationVTwo editConfiguration = new EditConfigurationVTwo();
initProcessParameters(vreq, session, editConfiguration);

View file

@ -2,6 +2,8 @@
package edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators;
import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.LANGUAGE_NEUTRAL;
import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.POLICY_NEUTRAL;
import static edu.cornell.mannlib.vitro.webapp.modelaccess.ModelNames.DISPLAY;
import java.util.ArrayList;
@ -35,6 +37,8 @@ import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields.IndividualsVi
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.validators.AntiXssValidation;
import edu.cornell.mannlib.vitro.webapp.i18n.I18n;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.LanguageOption;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.PolicyOption;
import edu.cornell.mannlib.vitro.webapp.modules.searchEngine.SearchEngine;
import edu.cornell.mannlib.vitro.webapp.modules.searchEngine.SearchEngineException;
import edu.cornell.mannlib.vitro.webapp.modules.searchEngine.SearchQuery;
@ -125,7 +129,10 @@ public class DefaultObjectPropertyFormGenerator implements EditConfigurationGene
// Someday we'll need to figure out a different way of doing this.
//WebappDaoFactory ctxDaoFact = ModelAccess.on(
// vreq.getSession().getServletContext()).getWebappDaoFactory();
WebappDaoFactory ctxDaoFact = vreq.getLanguageNeutralWebappDaoFactory();
// WebappDaoFactory ctxDaoFact = vreq.getLanguageNeutralWebappDaoFactory();
//UQAM Linguistic-Management Manage linguistic context
WebappDaoFactory ctxDaoFact = ModelAccess.on(vreq).getWebappDaoFactory(LanguageOption.LANGUAGE_AWARE, PolicyOption.POLICY_NEUTRAL);
List<VClass> types = new ArrayList<VClass>();
Individual subject = EditConfigurationUtils.getSubjectIndividual(vreq);
@ -460,7 +467,7 @@ public class DefaultObjectPropertyFormGenerator implements EditConfigurationGene
private void prepareForUpdate(VitroRequest vreq, HttpSession session, EditConfigurationVTwo editConfiguration) {
//Here, retrieve model from
OntModel model = ModelAccess.on(session.getServletContext()).getOntModel();
OntModel model = ModelAccess.on(vreq).getOntModel();
//if object property
if(EditConfigurationUtils.isObjectProperty(EditConfigurationUtils.getPredicateUri(vreq), vreq)){
Individual objectIndividual = EditConfigurationUtils.getObjectIndividual(vreq);

View file

@ -15,6 +15,7 @@ import java.util.HashSet;
import java.util.List;
import java.util.Locale;
import java.util.Map;
import java.util.Set;
import javax.servlet.http.HttpSession;
@ -41,6 +42,7 @@ import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.fields.FieldVTwo;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.FoafNameToRdfsLabelPreprocessor;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ManageLabelsForIndividualPreprocessor;
import edu.cornell.mannlib.vitro.webapp.i18n.selection.SelectedLocale;
import edu.cornell.mannlib.vitro.webapp.rdfservice.filter.LanguageFilteringUtils;
import edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.DataPropertyStatementTemplateModel;
/**
@ -202,12 +204,12 @@ public class ManageLabelsForIndividualGenerator extends BaseEditConfigurationGen
private void addFormSpecificData(EditConfigurationVTwo config,
VitroRequest vreq) {
//Get all language codes/labels in the system, and this list is sorted by language name
List<HashMap<String, String>> locales = this.getLocales(vreq);
//the labels already added by the user
ArrayList<Literal> existingLabels = this.getExistingLabels(config.getSubjectUri(), vreq);
//Get language codes/labels for languages present in the existing labels
List<HashMap<String, String>> locales = this.getLocales(vreq, existingLabels);
//Get code to label hashmap - we use this to get the language name for the language code returned in the rdf literal
HashMap<String, String> localeCodeToNameMap = this.getFullCodeToLanguageNameMap(locales);
//the labels already added by the user
ArrayList<Literal> existingLabels = this.getExistingLabels(config.getSubjectUri(), vreq);
HashMap<String, String> localeCodeToNameMap = this.getFullCodeToLanguageNameMap(locales);
int numberExistingLabels = existingLabels.size();
//existing labels keyed by language name and each of the list of labels is sorted by language name
HashMap<String, List<LabelInformation>> existingLabelsByLanguageName = this.getLabelsSortedByLanguageName(existingLabels, localeCodeToNameMap, config, vreq);
@ -224,6 +226,20 @@ public class ManageLabelsForIndividualGenerator extends BaseEditConfigurationGen
config.addFormSpecificData("displayRemoveLink", (numberExistingLabels > 1));
// get current selected locale
String rangeLang = vreq.getLocale().getLanguage();
if (!vreq.getLocale().getCountry().isEmpty()) {
rangeLang += "-" + vreq.getLocale().getCountry();
}
// check if locale already has an entry (label)
boolean localeEntryExisting = true;
for (HashMap<String, String> tmp : availableLocalesForAdd) {
if (tmp.get("code").equals(rangeLang)) localeEntryExisting = false;
}
config.addFormSpecificData("localeEntryExisting", localeEntryExisting);
config.addFormSpecificData("currentSelectedLocale", rangeLang);
//How do we edit? Will need to see
config.addFormSpecificData("deleteWebpageUrl", "/edit/primitiveDelete");
@ -359,8 +375,9 @@ public class ManageLabelsForIndividualGenerator extends BaseEditConfigurationGen
ArrayList<Literal> labels = new ArrayList<Literal>();
try {
//We want to get the labels for all the languages, not just the display language
ResultSet results = QueryUtils.getLanguageNeutralQueryResults(queryStr, vreq);
// Get results filtered to current locale so as to be consistent
// with other editing forms.
ResultSet results = QueryUtils.getQueryResults(queryStr, vreq);
while (results.hasNext()) {
QuerySolution soln = results.nextSolution();
Literal nodeLiteral = soln.get("label").asLiteral();
@ -387,30 +404,32 @@ public class ManageLabelsForIndividualGenerator extends BaseEditConfigurationGen
return template;
}
//get locales present in list of literals
public List<HashMap<String, String>> getLocales(VitroRequest vreq,
List<Literal> existingLiterals) {
Set<Locale> locales = new HashSet<Locale>();
for(Literal literal : existingLiterals) {
String language = literal.getLanguage();
if(!StringUtils.isEmpty(language)) {
locales.add(LanguageFilteringUtils.languageToLocale(language));
}
}
if (locales.isEmpty()) {
return Collections.emptyList();
}
List<HashMap<String, String>> list = new ArrayList<HashMap<String, String>>();
Locale currentLocale = SelectedLocale.getCurrentLocale(vreq);
for (Locale locale : locales) {
try {
list.add(buildLocaleMap(locale, currentLocale));
} catch (FileNotFoundException e) {
log.warn("Can't show locale '" + locale + "': " + e);
}
}
//get locales
public List<HashMap<String, String>> getLocales(VitroRequest vreq) {
List<Locale> selectables = SelectedLocale.getSelectableLocales(vreq);
if (selectables.isEmpty()) {
return Collections.emptyList();
}
List<HashMap<String, String>> list = new ArrayList<HashMap<String, String>>();
Locale currentLocale = SelectedLocale.getCurrentLocale(vreq);
for (Locale locale : selectables) {
try {
list.add(buildLocaleMap(locale, currentLocale));
} catch (FileNotFoundException e) {
log.warn("Can't show the Locale selector for '" + locale
+ "': " + e);
}
}
return list;
return list;
}
public HashMap<String, String> getFullCodeToLanguageNameMap(List<HashMap<String, String>> localesList) {
HashMap<String, String> codeToLanguageMap = new HashMap<String, String>();
for(Map<String, String> locale: localesList) {

View file

@ -233,7 +233,7 @@ public class NewIndividualFormGenerator implements EditConfigurationGenerator {
private void prepareForUpdate(VitroRequest vreq, HttpSession session, EditConfigurationVTwo editConfiguration) {
//Here, retrieve model from
OntModel model = ModelAccess.on(session.getServletContext()).getOntModel();
OntModel model = ModelAccess.on(vreq).getOntModel();
//This form is always doing a non-update
editConfiguration.prepareForNonUpdate( model );

View file

@ -298,7 +298,7 @@ public class RDFSLabelGenerator implements EditConfigurationGenerator {
private void prepareForUpdate(VitroRequest vreq, HttpSession session, EditConfigurationVTwo editConfiguration) {
//Here, retrieve model from
OntModel model = ModelAccess.on(session.getServletContext()).getOntModel();
OntModel model = ModelAccess.on(vreq).getOntModel();
if( editConfiguration.isDataPropertyUpdate() ){
editConfiguration.prepareForDataPropUpdate(model, vreq.getWebappDaoFactory().getDataPropertyDao());
}

View file

@ -0,0 +1,92 @@
package edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors;
import java.util.ArrayList;
import java.util.List;
import java.util.Locale;
import javax.servlet.http.HttpServletRequest;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.rdf.model.Literal;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.RDFNode;
import org.apache.jena.rdf.model.Statement;
import org.apache.jena.rdf.model.StmtIterator;
import edu.cornell.mannlib.vitro.webapp.rdfservice.filter.LanguageFilteringUtils;
/**
* A model change preprocessor that discards triples with language tags
* in the retractionsModel that do not match the specified language, unless
* the additionsModel also contains a new value for the same subject and
* predicate in that language, or no values in any language are added for the
* same subject and predicate (such as when an entire resource is deleted) .
*/
public class LimitRemovalsToLanguage implements ModelChangePreprocessor {
private static final Log log = LogFactory.getLog(LimitRemovalsToLanguage.class);
private String language;
/**
* @param locale the Java locale object representing the language
* to which edits should be limited. May not be null.
*/
public LimitRemovalsToLanguage(Locale locale) {
if(locale == null) {
throw new IllegalArgumentException("Locale may not be null.");
}
this.language = LanguageFilteringUtils.localeToLanguage(locale);
}
/**
* @param language string representing the RDF language tag to which
* edits should be limited. May not be null.
*/
public LimitRemovalsToLanguage(String language) {
if(language == null) {
throw new IllegalArgumentException("Language may not be null.");
}
this.language = language;
}
@Override
public void preprocess(Model retractionsModel, Model additionsModel,
HttpServletRequest request) {
log.debug("limiting changes to " + language);
List<Statement> eliminatedRetractions = new ArrayList<Statement>();
StmtIterator sit = retractionsModel.listStatements();
while(sit.hasNext()) {
Statement stmt = sit.next();
if(stmt.getObject().isLiteral()) {
Literal lit = stmt.getObject().asLiteral();
if(!StringUtils.isEmpty(lit.getLanguage())
&& !lit.getLanguage().equals(language)) {
boolean eliminateRetraction = true;
StmtIterator replacements = additionsModel
.listStatements(stmt.getSubject(),
stmt.getPredicate(), (RDFNode) null);
if(!replacements.hasNext()) {
eliminateRetraction = false;
} else {
while(replacements.hasNext()) {
Statement replacement = replacements.next();
if(replacement.getObject().isLiteral()
&& lit.getLanguage().equals(replacement
.getObject().asLiteral()
.getLanguage())) {
eliminateRetraction = false;
}
}
}
if(eliminateRetraction) {
eliminatedRetractions.add(stmt);
}
}
}
}
retractionsModel.remove(eliminatedRetractions);
}
}

View file

@ -11,6 +11,7 @@ import javax.servlet.annotation.WebServlet;
import javax.servlet.http.HttpServletResponse;
import javax.servlet.http.HttpSession;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.ontology.OntModel;
@ -67,10 +68,20 @@ public class EditRequestDispatchController extends FreemarkerHttpServlet {
//TODO: Create this generator
final String RDFS_LABEL_FORM = "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.RDFSLabelGenerator";
final String DEFAULT_DELETE_FORM = "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.DefaultDeleteGenerator";
@Override
protected AuthorizationRequest requiredActions(VitroRequest vreq) {
//Check if this statement can be edited here and return unauthorized if not
final String MANAGE_MENUS_FORM = "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManagePageGenerator";
@Override
protected AuthorizationRequest requiredActions(VitroRequest vreq) {
// If request is for new individual, return simple do back end editing action permission
if (StringUtils.isNotEmpty(EditConfigurationUtils.getTypeOfNew(vreq))) {
return SimplePermission.DO_BACK_END_EDITING.ACTION;
} else if(MANAGE_MENUS_FORM.equals(vreq.getParameter("editForm"))) {
return SimplePermission.MANAGE_MENUS.ACTION;
}
if (isIndividualDeletion(vreq)) {
return SimplePermission.DO_BACK_END_EDITING.ACTION;
}
// Check if this statement can be edited here and return unauthorized if not
String subjectUri = EditConfigurationUtils.getSubjectUri(vreq);
String predicateUri = EditConfigurationUtils.getPredicateUri(vreq);
String objectUri = EditConfigurationUtils.getObjectUri(vreq);
@ -98,6 +109,16 @@ public class EditRequestDispatchController extends FreemarkerHttpServlet {
return isAuthorized? SimplePermission.DO_FRONT_END_EDITING.ACTION: AuthorizationRequest.UNAUTHORIZED;
}
private boolean isIndividualDeletion(VitroRequest vreq) {
String subjectUri = EditConfigurationUtils.getSubjectUri(vreq);
String predicateUri = EditConfigurationUtils.getPredicateUri(vreq);
String objectUri = EditConfigurationUtils.getObjectUri(vreq);
if (objectUri != null && subjectUri == null && predicateUri == null && isDeleteForm(vreq)) {
return true;
}
return false;
}
@Override
protected ResponseValues processRequest(VitroRequest vreq) {
@ -148,7 +169,7 @@ public class EditRequestDispatchController extends FreemarkerHttpServlet {
templateData.put("editConfiguration", etm);
templateData.put("editSubmission", submissionTemplateModel);
//Corresponding to original note for consistency with selenium tests and 1.1.1
templateData.put("title", "Edit");
templateData.put("title", etm.getPageTitle());
templateData.put("submitUrl", getSubmissionUrl(vreq));
templateData.put("cancelUrl", etm.getCancelUrl());
templateData.put("editKey", editConfig.getEditKey());
@ -355,7 +376,7 @@ public class EditRequestDispatchController extends FreemarkerHttpServlet {
String predicateUri = EditConfigurationUtils.getPredicateUri(vreq);
String formParam = getFormParam(vreq);
//if no form parameter, then predicate uri and subject uri must both be populated
if (formParam == null || "".equals(formParam)) {
if ((formParam == null || "".equals(formParam)) && !isDeleteForm(vreq)) {
if ((predicateUri == null || predicateUri.trim().length() == 0)) {
return true;
}

View file

@ -74,9 +74,11 @@ public class PostEditCleanupController extends FreemarkerHttpServlet{
//The submission for getting the entity to return to is not retrieved from the session but needs
//to be created - as it is in processRdfForm3.jsp
if( entityToReturnTo == null ){
//this will not work if there entityToReturnTo has a new resource URI,
//in that case entityToReturnTo should not have been passed to this method as null
MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq.getParameterMap(), editConfig);
// this will not work if there entityToReturnTo has a new resource URI,
// in that case entityToReturnTo should not have been passed to this method as null
// UQAM-Linguistic-Management
// MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq.getParameterMap(), editConfig);
MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq, editConfig);
entityToReturnTo = N3EditUtils.processEntityToReturnTo(editConfig, submission, vreq);
}

View file

@ -8,10 +8,11 @@ import java.util.HashMap;
import java.util.List;
import java.util.Map;
import javax.servlet.annotation.WebServlet;
import org.apache.commons.lang3.StringUtils;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.apache.jena.rdf.model.Literal;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.Property;
@ -37,8 +38,7 @@ import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.MultiValueEditSubmis
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.N3EditUtils;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.ProcessRdfForm;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.VTwo.RdfLiteralHash;
import javax.servlet.annotation.WebServlet;
import edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.LimitRemovalsToLanguage;
/**
* This servlet will convert a request to an EditSubmission,
@ -66,7 +66,9 @@ public class ProcessRdfFormController extends FreemarkerHttpServlet{
return handleMissingConfiguration(vreq);
//get the EditSubmission
MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq.getParameterMap(), configuration);
// MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq.getParameterMap(), configuration);
// Modified by UQAM-Linguistic-Management
MultiValueEditSubmission submission = new MultiValueEditSubmission(vreq, configuration);
EditSubmissionUtils.putEditSubmissionInSession(vreq.getSession(), submission);
//if errors, return error response
@ -101,8 +103,11 @@ public class ProcessRdfFormController extends FreemarkerHttpServlet{
if( configuration.isUseDependentResourceDelete() )
changes = ProcessRdfForm.addDependentDeletes(changes, queryModel);
// prevent form from removing literals in languages other than the one
// associated with the current request
configuration.addModelChangePreprocessor(new LimitRemovalsToLanguage(vreq.getLocale()));
N3EditUtils.preprocessModels(changes, configuration, vreq);
ProcessRdfForm.applyChangesToWriteModel(changes, queryModel, writeModel, N3EditUtils.getEditorUri(vreq) );
//Here we are trying to get the entity to return to URL,

View file

@ -253,5 +253,21 @@ public class UploadedFileHelper {
}
return !stmts.isEmpty();
}
public void removeUploadedFile(String subjectUri, String predicateUri, String fileUri) {
FileInfo fileInfo = FileInfo.instanceFromSurrogateUri(wadf, fileUri);
objectPropertyStatementDao
.deleteObjectPropertyStatement(new ObjectPropertyStatementImpl(subjectUri, predicateUri, fileUri));
deleteIfNotReferenced(fileInfo);
}
public void attachFileToSubject(FileInfo fileInfo, String subjectUri, String predicateUri) {
objectPropertyStatementDao
.insertNewObjectPropertyStatement(new ObjectPropertyStatementImpl(subjectUri, predicateUri, fileInfo.getUri()));
}
public void setPublicFileName(FileInfo fileInfo, String uploadedFileName) {
dataPropertyStatementDao.insertNewDataPropertyStatement(
new DataPropertyStatementImpl(fileInfo.getUri(), VitroVocabulary.PUBLIC_FILENAME, uploadedFileName));
}
}

View file

@ -35,6 +35,7 @@ import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess;
import edu.cornell.mannlib.vitro.webapp.modelaccess.ModelAccess.WhichService;
import edu.cornell.mannlib.vitro.webapp.modelaccess.impl.RequestModelAccessImpl;
import edu.cornell.mannlib.vitro.webapp.rdfservice.RDFService;
import edu.cornell.mannlib.vitro.webapp.rdfservice.filter.LanguageFilteringUtils;
import edu.cornell.mannlib.vitro.webapp.rdfservice.impl.RDFServiceUtils;
/**
@ -88,8 +89,10 @@ public class ModelSwitcher {
// If they asked for the display model, give it to them.
if (isParameterPresent(vreq, SWITCH_TO_DISPLAY_MODEL)) {
OntModel mainOntModel = ModelAccess.on(_context).getOntModel(DISPLAY);
OntModel tboxOntModel = ModelAccess.on(_context).getOntModel(DISPLAY_TBOX);
OntModel mainOntModel = LanguageFilteringUtils.wrapOntModelInALanguageFilter(
ModelAccess.on(vreq).getOntModel(DISPLAY), vreq);
OntModel tboxOntModel = LanguageFilteringUtils.wrapOntModelInALanguageFilter(
ModelAccess.on(vreq).getOntModel(DISPLAY_TBOX), vreq);
setSpecialWriteModel(vreq, mainOntModel);
vreq.setAttribute(VitroRequest.ID_FOR_ABOX_MODEL, VitroModelSource.ModelName.DISPLAY.toString());

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