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VIVO-435 changed domain/range of cites/citedBy and removed odd individuals that came in with the ISF

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brianjlowe 2013-11-14 09:52:11 -05:00
parent 65b13dc91d
commit 15c59932dd
3 changed files with 4 additions and 152 deletions
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8
rdf/tbox/filegraph/object-properties.owl
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@ -1141,8 +1141,8 @@ there is a measurement process p that has specified output m, a measurement datu
<!-- http://purl.org/ontology/bibo/citedBy -->
<owl:ObjectProperty rdf:about="http://purl.org/ontology/bibo/citedBy">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Document"/>
<rdfs:range rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:ObjectProperty>
@ -1150,8 +1150,8 @@ there is a measurement process p that has specified output m, a measurement datu
<!-- http://purl.org/ontology/bibo/cites -->
<owl:ObjectProperty rdf:about="http://purl.org/ontology/bibo/cites">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/IAO_0000030"/>
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Document"/>
<rdfs:range rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:ObjectProperty>

91
rdf/tbox/filegraph/research-resource-iao.owl
View file

@ -240,36 +240,6 @@ this case we explicitly refer to the singular form</obo:IAO_0000116>
<!-- http://purl.obolibrary.org/obo/IAO_0000078 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000078">
<owl:equivalentClass>
<owl:Class>
<owl:oneOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000124"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000423"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000125"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000122"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000123"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000428"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000120"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000121"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000002"/>
</owl:oneOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000102"/>
<obo:IAO_0000116 xml:lang="en">Better to represent curation as a process with parts and then relate labels to that process (in IAO meeting)</obo:IAO_0000116>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:&lt;http://purl.obolibrary.org/obo/obi&gt;</obo:IAO_0000119>
<obo:IAO_0000119 xml:lang="en">OBI_0000266</obo:IAO_0000119>
<obo:IAO_0000117 xml:lang="en">PERSON:Bill Bug</obo:IAO_0000117>
<obo:IAO_0000115 xml:lang="en">The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.</obo:IAO_0000115>
<obo:IAO_0000111 xml:lang="en">curation status specification</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000102 -->
@ -335,31 +305,6 @@ this case we explicitly refer to the singular form</obo:IAO_0000116>
<!-- http://purl.obolibrary.org/obo/IAO_0000225 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000225">
<owl:equivalentClass>
<owl:Class>
<owl:oneOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000227"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000228"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000226"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000103"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000229"/>
</owl:oneOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000102"/>
<obo:IAO_0000117 xml:lang="en">PERSON: Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON: Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000116 xml:lang="en">The creation of this class has been inspired in part by Werner Ceusters&apos; paper, Applying evolutionary terminology auditing to the Gene Ontology.</obo:IAO_0000116>
<obo:IAO_0000115 xml:lang="en">The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.</obo:IAO_0000115>
<obo:IAO_0000111 xml:lang="en">obsolescence reason specification</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
</owl:Class>
<!-- http://purl.obolibrary.org/obo/IAO_0000300 -->
@ -377,27 +322,6 @@ this case we explicitly refer to the singular form</obo:IAO_0000116>
<!-- http://purl.obolibrary.org/obo/IAO_0000409 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/IAO_0000409">
<owl:equivalentClass>
<owl:Class>
<owl:oneOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000410"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000420"/>
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000421"/>
</owl:oneOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000102"/>
<obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A denotator type indicates how a term should be interpreted from an ontological perspective.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Barry Smith, Werner Ceusters</obo:IAO_0000119>
<obo:IAO_0000112 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are &quot;natural kinds&quot; and the latter arbitrary collections of entities.</obo:IAO_0000112>
</owl:Class>
<!-- http://purl.org/ontology/bibo/Document -->
@ -421,21 +345,6 @@ this case we explicitly refer to the singular form</obo:IAO_0000116>
<!-- http://www.geneontology.org/formats/oboInOwl#Subset -->
<owl:Class rdf:about="http://www.geneontology.org/formats/oboInOwl#Subset">
<owl:equivalentClass>
<owl:Class>
<owl:oneOf rdf:parseType="Collection">
<rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000224"/>
</owl:oneOf>
</owl:Class>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000102"/>
</owl:Class>
<!-- http://www.geneontology.org/formats/oboInOwl#Synonym -->
<owl:Class rdf:about="http://www.geneontology.org/formats/oboInOwl#Synonym">