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work in progress on data migration and related changes for ISF properties

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brianjlowe 2013-08-05 16:46:25 -04:00
parent 5fad9b85fa
commit 4598aae578
20 changed files with 14929 additions and 20 deletions
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7310
productMods/WEB-INF/filegraph/tbox/bfo.owl Normal file
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productMods/WEB-INF/ontologies/app/loadedAtStartup/PropertyConfig.n3
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@prefix datagetter: <java:edu/cornell/mannlib/vitro/webapp/utils/datagetter/> . @prefix datagetter: <java:edu/cornell/mannlib/vitro/webapp/utils/datagetter/> .
@prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> . @prefix vitro: <http://vitro.mannlib.cornell.edu/ns/vitro/0.7#> .
@prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> . @prefix role: <http://vitro.mannlib.cornell.edu/ns/vitro/role#> .
@prefix local: <http://example.org/appConfig/> .
@prefix vivo: <http://vivoweb.org/ontology/core#> .
@base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> . @base <http://vitro.mannlib.cornell.edu/ns/vitro/ApplicationConfiguration> .
local:authorInAuthorshipContext a :ConfigContext ;
:hasConfiguration local:authorInAuthorshipConfig ;
:configContextFor vivo:relatedBy ;
:qualifiedBy vivo:Authorship .
local:authorInAuthorshipConfig a :ObjectPropertyDisplayConfig ;
:listViewConfigFile "listViewConfig-authorInAuthorship.xml"^^xsd:string ;
:displayName "selected publications" ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;
vitro:customEntryFormAnnot "edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator"^^xsd:string ;
:propertyGroup <http://vivoweb.org/ontology#vitroPropertyGroupresearch> .
<http://example.org/appConfig/hasRoleServiceProviderRoleContext> a :ConfigContext ; <http://example.org/appConfig/hasRoleServiceProviderRoleContext> a :ConfigContext ;
:hasConfiguration <http://example.org/appConfig/hasServiceProviderRoleConfig> ; :hasConfiguration <http://example.org/appConfig/hasServiceProviderRoleConfig> ;
:configContextFor <http://vivoweb.org/ontology/core#hasRole> ; :configContextFor <http://vivoweb.org/ontology/core#hasRole> ;
@ -18,9 +33,7 @@
<http://example.org/appConfig/hasServiceProviderRoleConfig> a :ObjectPropertyDisplayConfig ; <http://example.org/appConfig/hasServiceProviderRoleConfig> a :ObjectPropertyDisplayConfig ;
:hasListView [ :listViewConfigFile "listViewConfig-hasRole.xml"^^xsd:string ;
:listViewConfigFile "listViewConfig-hasRole.xml"^^<xsd:string>
] ;
:displayName "has service provider role" ; :displayName "has service provider role" ;
vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ; vitro:hiddenFromDisplayBelowRoleLevelAnnot role:public ;
vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ; vitro:prohibitedFromUpdateBelowRoleLevelAnnot role:public ;

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productMods/WEB-INF/ontologies/update/askUpdated.sparql
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@ -6,6 +6,6 @@ ASK {
graph <http://vitro.mannlib.cornell.edu/default/vitro-kb-applicationMetadata> { graph <http://vitro.mannlib.cornell.edu/default/vitro-kb-applicationMetadata> {
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology ?u . <http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology ?u .
?u vitro:updatedOntology <http://vivoweb.org/ontology/core> . ?u vitro:updatedOntology <http://vivoweb.org/ontology/core> .
?u vitro:toOntologyVersion "1.5" . ?u vitro:toOntologyVersion "1.6" .
} }
} }

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productMods/WEB-INF/ontologies/update/diff.tab.txt
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productMods/WEB-INF/ontologies/update/oldVersion/geopolitical.tbox.ver1.1-11-18-11.owl Normal file
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productMods/WEB-INF/ontologies/update/oldVersion/isDefinedBy-1.5.owl Normal file
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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
<rdf:Description rdf:about="http://www.w3.org/2000/01/rdf-schema#isDefinedBy">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
</rdf:Description>
</rdf:RDF>

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productMods/WEB-INF/ontologies/update/oldVersion/scires-1.5.owl Normal file
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<rdf:RDF
xmlns:vitro-public="http://vitro.mannlib.cornell.edu/ns/vitro/public#"
xmlns:c4o="http://purl.org/spar/c4o/"
xmlns:ero="http://purl.obolibrary.org/obo/"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:afn="http://jena.hpl.hp.com/ARQ/function#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:scires="http://vivoweb.org/ontology/scientific-research#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:fabio="http://purl.org/spar/fabio/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Ontology rdf:about="http://vivoweb.org/ontology/scientific-research"/>
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/">
<vitro:ontologyPrefixAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ero</vitro:ontologyPrefixAnnot>
</owl:Ontology>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000394">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service that produces a physical object or data, such as a custom micro-array chip, a made to order antibody, or a behavioral dataset</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service that produces a physical object or data.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000006">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.
NOTE: For now we are not addressing whether this is a subclass of foaf:Agent</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Material entity that is used in a chemical reaction or other experimental process to detect, measure, examine, or produce other substances.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase1ClinicalTrial">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase I trials, researchers test an experimental drug or treatment in a small group of people (20-80) for the first time to evaluate its safety, determine a safe dosage range, and identify side effects</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 1 Clinical Trial</vitro:shortDef>
<rdfs:subClassOf>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000016"/>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0100026">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>OBI: An organism is material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
NOTE that we are not addressing for now the issue of whether a foaf:Person is a subclass of obi:Organism</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An organism is a material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000016">
<rdfs:subClassOf>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000015"/>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A clinical trial is a research study using human volunteers to answer questions about treatments for diseases and conditions. Clinical trials are conducted in phases. The trials at each phase have a different purpose and help scientists answer different questions.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A research study using human volunteers to answer specifc health-related questions. </vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000020">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Material entity that is a portion or quantity of a biological material for use in testing, examination, or study. A biological specimen can be an individual animal, part of or derived an animal, plant, part of a plant, or microorganism. When a taxon is described, it is typically based on a single specimen and is referred to as the holotype.</vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An individual animal, part of or derived an animal, plant, part of a plant, or microorganism.</vitro:exampleAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A portion or quantity of a biological material for use in testing, examination, or study.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase3ClinicalTrial">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 3 trials, an experimental study drug or treatment is given to large groups of people (1,000-3,000) to confirm its effectiveness, monitor side effects, compare it to commonly used treatments, and collect information that will allow the experimental drug or treatment to be used safely.
</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 3 Clinical Trial</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000004">
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000460"/>
</owl:onProperty>
<owl:allValuesFrom rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An implement used to facilitate work, especially precision work.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An implement used to facilitate work, especially precision work.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Equipment"/>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0000272">
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A protocol is a plan specification which has sufficient level of detail and quantitative information to communicate it between domain experts, so that different domain experts will reliably be able to independently reproduce the process.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A plan specification that allows different domain experts to reliably and independently reproduce a process.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase0ClinicalTrial">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 0 is a recent designation for exploratory, first-in-human trials conducted in accordance with the United States Food and Drug Administration's (FDA) 2006 Guidance on Exploratory Investigational New Drug (IND) Studies. Phase 0 trials are also known as human microdosing studies and are designed to speed up the development of promising drugs or imaging agents by establishing very early on whether the drug or agent behaves in human subjects as was expected from preclinical studies.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 0 Clinical Trial</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase4ClinicalTrial">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 4 Clinical Trial</vitro:shortDef>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 4 trials, post marketing studies delineate additional information including the drug's or treatment's risks, benefits, and optimal use.</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000391">
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provision of service.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer receives the right to use a resource (instrument, database, software, etc) that is owned or managed by a service provider. Ownership of the accessed resource remains with the service provider during and after provisi</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000014">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The comment in ero says "Maybe sameAs Investigation but is subject of funding"</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Project"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A project whose goal is the increase of knowledge, the primary aim being a greater knowledge or understanding of the subject under study.</vitro:shortDef>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000015">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>eagle-i: Research project that uses or collects measurements or assessments about humans.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Research project that uses or collects measurements or assessments about humans.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000014"/>
</owl:Class>
<owl:Class rdf:about="http://vivoweb.org/ontology/scientific-research#Phase2ClinicalTrial">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Phase 2 Clinical Trial</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>In Phase 2 trials, an experimental study drug or treatment is given to a larger group of people (100-300) to see if it is effective and to further evaluate its safety.</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ERO_0000392">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A service in which a service consumer provides some material or data as input which a service provider stores and returns as output.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://vivoweb.org/ontology/core#Service"/>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000029">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#accessProvidedBy"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000391"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000460">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#documentationFor"/>
</owl:inverseOf>
<rdfs:range rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ERO_0000481">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#protocolRealizedBy"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Service"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#documentationFor">
<rdfs:domain rdf:resource="http://purl.org/ontology/bibo/Document"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000460"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#accessProvidedBy">
<rdfs:range rdf:resource="http://purl.obolibrary.org/obo/ERO_0000391"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000029"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/scientific-research#protocolRealizedBy">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Service"/>
<owl:inverseOf rdf:resource="http://purl.obolibrary.org/obo/ERO_0000481"/>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/OBI_0000272"/>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#irbNumber">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Every clinical trial in the United States must be approved and monitored by an Institutional Review Board (IRB). An IRB is an independent committee of physicians, statisticians, community advocates and others whose objective is to ensure that a clinical trial is ethical and the rights of study participants are protected. </vitro:descriptionAnnot>
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#studyPopulationCount">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>number of human participants in the study (trial).</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://vivoweb.org/ontology/scientific-research#nctId">
<rdfs:domain rdf:resource="http://purl.obolibrary.org/obo/ERO_0000016"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>ClinicalTrials.gov is an ICMJE-acceptable public registry, offering up-to-date information for locating clinical trials for a wide range of diseases and conditions. The U.S. National Institutes of Health (NIH), through its National Library of Medicine (NLM), developed this site in collaboration with the Food and Drug Administration (FDA), as a result of the FDA Modernization Act, which was passed into law in November 1997. This property should be publically visible since it is one of the principal identifiers in a national registry of clinical trials </vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>NCT00000419</vitro:exampleAnnot>
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#identifier"/>
</owl:DatatypeProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/spar/c4o/BibliographicInformationSource">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A source of information about bibliographic citations, such as Google Scholar, Web of Science or Scopus.</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/c4o/GlobalCitationCount">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The number of times a work has been cited globally, as determined from a particular bibliographic information source on a particular date.</vitro:descriptionAnnot>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCitationFrequency">
<rdfs:range rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A property linking a publication entity to the property c40:GlobalCitationCount that specify how many times a work has been cited by others, according to a particular information source on a particular date.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountSource">
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A property linking the property c40:GlobalCitationCount to the bibliographic information source providing the global citation count information for a particular publication on a particular date.</vitro:descriptionAnnot>
<rdfs:range rdf:resource="http://purl.org/spar/c4o/BibliographicInformationSource"/>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountValue">
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#int"/>
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An integer defining the value of the global citation count of a cited entity recorded from a named bibliographic information source on a particular date.</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:DatatypeProperty rdf:about="http://purl.org/spar/c4o/hasGlobalCountDate">
<rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#date"/>
<rdfs:domain rdf:resource="http://purl.org/spar/c4o/GlobalCitationCount"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The date on which the global citation count of the cited entity was recorded from a named bibliographic information source.</vitro:descriptionAnnot>
</owl:DatatypeProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:ObjectProperty rdf:about="http://purl.org/dc/elements/1.1/isVersionOf">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This namespace - http://purl.org/dc/elements/1.1/ - does not appear to have this element.</vitro:descriptionAnnot>
</owl:ObjectProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/contributor">
<skos:scopeNote xml:lang="en">Used to link a bibliographic item to one of its contributor: can be an author, an editor, a publisher, etc.</skos:scopeNote>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/relation">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/isVersionOf">
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Document1 isVersionOf Document2</vitro:exampleAnnot>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/isReferencedBy">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This term is intended to be used with non-literal values as defined in the DCMI Abstract Model (http://dublincore.org/documents/abstract-model/). As of December 2007, the DCMI Usage Board is seeking a way to express this intention with a formal range declaration.</vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to relate a reference citation to a bibliographic resource.</skos:scopeNote>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/dc/terms/publisher">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public definition source: http://dublincore.org/2008/01/14/dcterms.rdf# .
Examples of a Publisher include a person, an organization, or a service. Typically, the name of a Publisher should be used to indicate the entity.</vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to link a bibliographic item to its publisher.</skos:scopeNote>
</owl:ObjectProperty>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/source"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/modified"/>
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/description"/>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/NET/c4dm/event.owl#Event">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicLocation"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasGeographicLocation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#domesticGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Only use if no specific subclasses of event:Event are appropriate.</vitro:exampleAnnot>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This class will also display instances of subclasses under Event, e.g. Philosophy Department Discussion Club; 2009 Racker Lecture; screening of a documentary. In addition to a location in space and time, an event may have any or all the following qualities: actively participating agents, passive factors, work products. Also, it may be in a virtual space or part of a series such as a lecture series.
The previous short definition was: "An arbitrary classification of a space/time region, by a cognitive agent."</vitro:descriptionAnnot>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasSubjectArea"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#URLLink"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#webpage"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#realizedRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Something that happens at a given place and time.</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#internationalGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#DateTimeInterval"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#dateTimeInterval"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#description"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#geographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contactInformation"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#produced_in">
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#outcomeOf"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#product"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#isAgentIn">
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#agent"/>
</owl:inverseOf>
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<rdfs:range rdf:resource="http://purl.org/NET/c4dm/event.owl#Event"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#product">
<rdfs:subPropertyOf rdf:resource="http://vivoweb.org/ontology/core#outcome"/>
<owl:inverseOf rdf:resource="http://purl.org/NET/c4dm/event.owl#produced_in"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://purl.org/NET/c4dm/event.owl#agent">
<rdfs:range rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<owl:inverseOf rdf:resource="http://purl.org/NET/c4dm/event.owl#isAgentIn"/>
<rdfs:domain rdf:resource="http://purl.org/NET/c4dm/event.owl#Event"/>
</owl:ObjectProperty>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://purl.org/spar/fabio/ClinicalGuideline">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A recommendation on the appropriate treatment and care of people with a specific disease or condition, based on the best available evidence, designed to help healthcare professionals in their work.</vitro:shortDef>
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/fabio/Comment">
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by</vitro:shortDef>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A verbal or written remark concerning some entity. In written form, a comment is often appended to that entity and termed an annotation. Within computer programs or ontologies, comments are added to enhance human understanding, and are usually prefaced by a special syntactic symbol that ensures they are ignored during execution of the program.
has super-classes</vitro:descriptionAnnot>
</owl:Class>
<owl:Class rdf:about="http://purl.org/spar/fabio/Erratum">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A formal correction to an error introduced by the publisher into a previously published document.</vitro:descriptionAnnot>
<rdfs:subClassOf rdf:resource="http://purl.org/ontology/bibo/Document"/>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A formal correction to an error introduced by the publisher into a previously published document.</vitro:shortDef>
</owl:Class>
</rdf:RDF>

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<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Person">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#domesticGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasCollaborator"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Organization"/>
</owl:allValuesFrom>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#currentMemberOf"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#geographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2002/07/owl#Thing"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasResearchArea"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>The most general classification of a person</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Credential"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#eligibleFor"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicRegion"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#internationalGeographicFocus"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#AwardReceipt"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#awardOrHonor"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Organization">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://xmlns.com/foaf/0.1/Organization"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasSubOrganization"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>This class will display all the instances in the subclasses below it, as well as any organizations that were added as part of this generic class because there wasn't a specific class available.</vitro:descriptionAnnot>
<vitro:exampleAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Only use if no specific subclasses of foaf:organization desribe the organization.</vitro:exampleAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A generic class encompassing several types of organizations.</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</owl:allValuesFrom>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasCurrentMember"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent"/>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#abbreviation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#GeographicLocation"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#hasGeographicLocation"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contributingRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<skos:scopeNote xml:lang="en">Ued to describe an organization related to bibliographic items such as a publishing company, etc.</skos:scopeNote>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#DateTimeInterval"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#dateTimeInterval"/>
</owl:Restriction>
</rdfs:subClassOf>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Agent">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#freetextKeyword"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#authorInAuthorship"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Agents are things that do stuff</vitro:shortDef>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#InformationResource"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#featuredIn"/>
</owl:Restriction>
</rdfs:subClassOf>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>see: http://xmlns.com/foaf/spec/#term_Agent</vitro:descriptionAnnot>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#email"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Address"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#mailingAddress"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://www.w3.org/2000/01/rdf-schema#Literal"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#primaryEmail"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#URLLink"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#webpage"/>
</owl:Restriction>
</rdfs:subClassOf>
<skos:scopeNote xml:lang="en">Used to describe any "agent" related to bibliographic items. Such agents can be persons, organizations or groups of any kind.</skos:scopeNote>
</owl:Class>
<owl:Class rdf:about="http://xmlns.com/foaf/0.1/Group">
<rdfs:subClassOf>
<owl:Restriction>
<owl:allValuesFrom rdf:resource="http://vivoweb.org/ontology/core#Role"/>
<owl:onProperty rdf:resource="http://vivoweb.org/ontology/core#contributingRole"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf rdf:resource="http://xmlns.com/foaf/0.1/Agent"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>A group can also be an organization but need not be; typically used for looser associations of people or organizations acting together in some fashion, not necessarily through formal agreement or on a long-term basis. Added to the VIVO ontology to be able to support informal and perhaps even private groups of people around an idea, funding opportunity, or event.
see: http://xmlns.com/foaf/spec/#term_Group</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
> A collection of individual agents (and may itself play the role of a Agent, ie. something that can perform actions). </vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://xmlns.com/foaf/0.1/based_near">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Definition take from: http://xmlns.com/foaf/spec/#term_based_near . foaf indicates that the status of this term is "unstable". "The based_near relationship relates two "spatial things" (anything that can be somewhere), the latter typically described using the geo:lat / geo:long geo-positioning vocabulary (http://www.w3.org/2003/01/geo/wgs84_pos#). This allows us to say describe the typical latitute and longitude of, say, a Person (people are spatial things - they can be places) without implying that a precise location has been given." </vitro:descriptionAnnot>
<skos:scopeNote xml:lang="en">Used to link an agent, related to bibliographic things, to a place where it is based near: can be a city, a monument, a building, etc.</skos:scopeNote>
</owl:ObjectProperty>
<owl:DatatypeProperty rdf:about="http://xmlns.com/foaf/0.1/lastName">
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#FunctionalProperty"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://xmlns.com/foaf/spec/#term_lastName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases."</vitro:descriptionAnnot>
</owl:DatatypeProperty>
<owl:FunctionalProperty rdf:about="http://xmlns.com/foaf/0.1/firstName">
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>http://xmlns.com/foaf/spec/#term_firstName. Note from foaf: "The lastName property is provided (alongside firstName) as a mechanism to support legacy data that cannot be easily interpreted in terms of the (otherwise preferred) familyName and givenName properties. The concepts of 'first' and 'last' names do not work well across cultural and linguistic boundaries; however they are widely used in addressbooks and databases."</vitro:descriptionAnnot>
<rdfs:domain rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DatatypeProperty"/>
</owl:FunctionalProperty>
</rdf:RDF>

39
productMods/WEB-INF/ontologies/update/oldVersion/vivo-pws-1.5.owl Normal file
View file

@ -0,0 +1,39 @@
<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://vivoweb.org/ontology/provenance-support#PersonAsListed">
<rdfs:subClassOf rdf:resource="http://xmlns.com/foaf/0.1/Person"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation. Represents one person's information from one source at one particular time.</vitro:descriptionAnnot>
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>For data ingest from authoritative sources to record the actual way a person was listed, as potentially valuable information for provenance and person disambiguation.</vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#authorAsListed">
<rdfs:range rdf:resource="http://vivoweb.org/ontology/provenance-support#PersonAsListed"/>
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#listedAuthorFor"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://vivoweb.org/ontology/provenance-support#listedAuthorFor">
<rdfs:domain rdf:resource="http://vivoweb.org/ontology/provenance-support#PersonAsListed"/>
<rdfs:range rdf:resource="http://vivoweb.org/ontology/core#Authorship"/>
<owl:inverseOf rdf:resource="http://vivoweb.org/ontology/provenance-support#authorAsListed"/>
</owl:ObjectProperty>
</rdf:RDF>

45
productMods/WEB-INF/ontologies/update/oldVersion/vivo-skos-1.5.owl Normal file
View file

@ -0,0 +1,45 @@
<rdf:RDF
xmlns:geo="http://aims.fao.org/aos/geopolitical.owl#"
xmlns:skco="http://www.w3.org/2004/02/skos/core#"
xmlns:event="http://purl.org/NET/c4dm/event.owl#"
xmlns:pvs="http://vivoweb.org/ontology/provenance-support#"
xmlns:dcelem="http://purl.org/dc/elements/1.1/"
xmlns:owl2="http://www.w3.org/2006/12/owl2-xml#"
xmlns:scirr="http://vivoweb.org/ontology/scientific-research-resource#"
xmlns:vivo="http://vivoweb.org/ontology/core#"
xmlns:vann="http://purl.org/vocab/vann/"
xmlns:vitro="http://vitro.mannlib.cornell.edu/ns/vitro/0.7#"
xmlns:skos="http://www.w3.org/2008/05/skos#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:bibo="http://purl.org/ontology/bibo/"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:swvs="http://www.w3.org/2003/06/sw-vocab-status/ns#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#">
<owl:Class rdf:about="http://www.w3.org/2004/02/skos/core#Concept">
<vitro:shortDef rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>An idea or notion; a unit of thought.</vitro:shortDef>
</owl:Class>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#narrower">
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .</vitro:descriptionAnnot>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<owl:inverseOf>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#broader"/>
</owl:inverseOf>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#related">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
</owl:ObjectProperty>
<owl:ObjectProperty rdf:about="http://www.w3.org/2004/02/skos/core#broader">
<rdfs:domain rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<rdfs:range rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/>
<vitro:descriptionAnnot rdf:datatype="http://www.w3.org/2001/XMLSchema#string"
>Public description modified from the information on this page: http://www.w3.org/TR/2005/WD-swbp-skos-core-guide-20050510/#sechierarchy .</vitro:descriptionAnnot>
<owl:inverseOf rdf:resource="http://www.w3.org/2004/02/skos/core#narrower"/>
</owl:ObjectProperty>
</rdf:RDF>

6
productMods/WEB-INF/ontologies/update/success.n3
View file

@ -5,6 +5,6 @@
<http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> . <http://vitro.mannlib.cornell.edu/default/vitro-kb-2> vitro:updatedToOntology <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> rdf:type owl:Thing . <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> rdf:type owl:Thing .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:updatedOntology <http://vivoweb.org/ontology/core> . <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:updatedOntology <http://vivoweb.org/ontology/core> .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:fromOntologyVersion "1.4" . <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:fromOntologyVersion "1.5" .
<http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:toOntologyVersion "1.5" . <http://vitro.mannlib.cornell.edu/ns/vitro/metadata/migration/v1.5> vitro:toOntologyVersion "1.6" .

2
productMods/WEB-INF/resources/startup_listeners.txt
View file

@ -34,7 +34,7 @@ edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdatePermissionSetUris
# Invokes process to perform updates to align with ontology changes if needed --> # Invokes process to perform updates to align with ontology changes if needed -->
# Needs to run before submodels are attached and Pellet is set up --> # Needs to run before submodels are attached and Pellet is set up -->
#edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdateKnowledgeBase edu.cornell.mannlib.vitro.webapp.servlet.setup.UpdateKnowledgeBase
edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup edu.cornell.mannlib.vitro.webapp.servlet.setup.FileGraphSetup

26
productMods/config/listViewConfig-authorInAuthorship.xml
View file

@ -27,7 +27,8 @@
?hideThis ?hideThis
WHERE { WHERE {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource a bibo:Document .
?infoResource rdfs:label ?infoResourceName ?infoResource rdfs:label ?infoResourceName
OPTIONAL { ?infoResource bibo:volume ?volume } OPTIONAL { ?infoResource bibo:volume ?volume }
@ -80,7 +81,8 @@
CONSTRUCT { CONSTRUCT {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship ?authorshipProperty ?authorshipValue . ?authorship ?authorshipProperty ?authorshipValue .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource a bibo:Document .
?infoResource rdfs:label ?infoResourceName . ?infoResource rdfs:label ?infoResourceName .
?infoResource core:hasPublicationVenue ?publishedIn . ?infoResource core:hasPublicationVenue ?publishedIn .
?publishedIn rdfs:label ?journal ?publishedIn rdfs:label ?journal
@ -138,29 +140,30 @@
?authorship ?authorshipProperty ?authorshipValue ?authorship ?authorshipProperty ?authorshipValue
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource ?authorship core:relates ?infoResource
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource a bibo:Document .
?infoResource ?infoResourceProperty ?infoResourceValue ?infoResource ?infoResourceProperty ?infoResourceValue
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource bibo:reproducedIn ?appearsInObj . ?infoResource bibo:reproducedIn ?appearsInObj .
?appearsInObj rdfs:label ?appearsIn ?appearsInObj rdfs:label ?appearsIn
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource core:publisher ?publisherObj . ?infoResource core:publisher ?publisherObj .
?publisherObj rdfs:label ?publisher ?publisherObj rdfs:label ?publisher
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource core:editor ?editorObj . ?infoResource core:editor ?editorObj .
?editorObj rdfs:label ?editor ?editorObj rdfs:label ?editor
} UNION { } UNION {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource core:partOf ?partOfObj . ?infoResource core:partOf ?partOfObj .
?partOfObj rdfs:label ?partOf ?partOfObj rdfs:label ?partOf
} }
@ -170,14 +173,17 @@
<query-construct> <query-construct>
PREFIX core: &lt;http://vivoweb.org/ontology/core#&gt; PREFIX core: &lt;http://vivoweb.org/ontology/core#&gt;
PREFIX rdfs: &lt;http://www.w3.org/2000/01/rdf-schema#&gt; PREFIX rdfs: &lt;http://www.w3.org/2000/01/rdf-schema#&gt;
PREFIX bibo: &lt;http://purl.org/ontology/bibo/&gt;
CONSTRUCT { CONSTRUCT {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource a bibo:Document .
?infoResource core:dateTimeValue ?dateTimeValue . ?infoResource core:dateTimeValue ?dateTimeValue .
?dateTimeValue core:dateTime ?dateTime ?dateTimeValue core:dateTime ?dateTime
} WHERE { } WHERE {
?subject ?property ?authorship . ?subject ?property ?authorship .
?authorship core:linkedInformationResource ?infoResource . ?authorship core:relates ?infoResource .
?infoResource a bibo:Document .
?infoResource core:dateTimeValue ?dateTimeValue . ?infoResource core:dateTimeValue ?dateTimeValue .
?dateTimeValue core:dateTime ?dateTime ?dateTimeValue core:dateTime ?dateTime
} }