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525 commits

Author SHA1 Message Date
j2blake
83542dc42e Add license tag lines. 2011-11-08 15:51:27 +00:00
brianjlowe
937f84cd08 adding license tags 2011-11-08 14:34:51 +00:00
kongchinhua
5f9d321d71 Change 'Unlocated' text to Unmapped. 
Disable People comparison due to the existing data are not sufficient to create map of science.
Support save entity table as CSV
 2011-11-07 19:04:08 +00:00
brianjlowe
5c8fbbb798 updating UMLSConceptSearch to use URLEncoder convenience class 2011-11-07 15:49:21 +00:00
hjkhjk54
5c947b954f Updates to generators 2011-11-04 22:02:19 +00:00
brianjlowe
24aeb7bf34 NIHVIVO-3264 use new URLEncoder convenience class to avoid deprecation warnings 2011-11-04 21:00:29 +00:00
hjkhjk54
57ab4e92f3 Updates for freemarker conversion and also updates for umls term service integration 2011-11-04 18:46:29 +00:00
briancaruso
0e633944bd Adding PersonHasEducationlTraining and VivoBaseGenerator 2011-11-04 16:53:42 +00:00
hjkhjk54
8a54ca774e 2011-11-04 14:19:04 +00:00
hjkhjk54
b1bb28012a updates for w stage role forms and adding new individual form generator 2011-11-03 21:46:25 +00:00
stellamit
116f73a615 latest ontology and upgrade code 2011-11-03 20:42:54 +00:00
hjkhjk54
75eb9952d0 Updates for add role to person two stage logic 2011-11-02 21:04:19 +00:00
tworrall
babd610e03 NIHVIVO-2288: one more generator class, for attendee role 2011-11-02 19:05:01 +00:00
hjkhjk54
dc08fbea1a 2011-11-02 14:56:54 +00:00
tworrall
5158aaa913 NIHVIVO-2288: freemarker conversion, templates and generators -- again 2011-11-01 20:28:04 +00:00
tworrall
8f7ebc6781 temporarily backing out generators 2011-11-01 20:12:02 +00:00
stellamit
ebab6e5c52 fixing process/project bug 2011-11-01 20:09:38 +00:00
tworrall
e2e7574e1b NIHVIVO-2288: freemarker conversion, templates and generators 2011-11-01 19:30:43 +00:00
briancaruso
827ea6d7e9 Removing rdfs:label from search index document field ALLTEXT. Moving vivo specific DocumentModifiers out of vitro. NIHVIVO-2975 2011-11-01 16:19:02 +00:00
stellamit
db124422af NIHVIVO-3266 (list views for roles) NIHVIVO-3206 (data migration) 2011-10-28 21:42:25 +00:00
brianjlowe
f93b025963 NIHVIVO-3223 derive dc:creator for documents 2011-10-26 21:08:54 +00:00
brianjlowe
ffc5f98325 NIHVIVO-3221 derive dc:title for documents 2011-10-25 19:21:34 +00:00
stellamit
57aca13052 modifications to NIHVIVO-3238 implementation based on Brian L. feedeback 2011-10-25 15:48:47 +00:00
stellamit
7f8fe2e846 NIHVIVO-3238 - class for determining right side of role predicate based on right side of role class 2011-10-25 15:29:21 +00:00
j2blake
c2aa53087f NIHVIVO-336 Add the alert icon to the site admin page, if there were warnings at startup. 2011-09-27 14:38:31 +00:00
j2blake
00ffd7ddb0 NIHVIVO-336 Modify the listeners to use StartupStatus instead of AbortStartup 2011-09-26 13:33:45 +00:00
jrpence
4ff87201a3 Attempting to make the file harvest help message more helpful. 2011-08-18 18:25:36 +00:00
hjkhjk54
1c4d73da07 Updates for including termType as information to be displayed in custom list view as well as editing page (and added in the N3). 2011-08-16 21:02:45 +00:00
hjkhjk54
dd44eeb314 Updates for terminology annotation, sending submission URL from jsp to javascript instead of hard-coding. Also including some basic validation by preventing submission when no terms are selected. 2011-08-16 17:00:01 +00:00
hjkhjk54
dc46b3e195 Adding changes and code for terminology annotation support and integration of UMLS vocabulary 2011-08-15 21:48:08 +00:00
tankchintan
40245b1a91 1. Improved logic in data response for temporal graphs. 
2. Fixed a performance problem with co-investigator network visualization.
 2011-08-10 23:02:42 +00:00
ryounes
69b315effe NIHVIVO-2508 Change template properties to methods so not pre-computed. 2011-08-05 22:25:47 +00:00
ryounes
2e20918beb NIHVIVO-2508 Preparation for exposing some template model methods as methods rather than properties. Also condensed code used to generate editing links for menu management. 2011-08-03 14:55:20 +00:00
hjkhjk54
fcdff9ea54 Updates for NIHVIVO-3086 and NIHVIVO-2980 and subtasks: updating page data getters to rely on java class name, separating out internal class-specific set up and processing for menu management into VIVO code. 2011-08-02 15:24:29 +00:00
tankchintan
9a87463e61 1. Improvement of response time for co-pi visualization. In future remove the custom contruct queries and make use of cached, at least for the gramnts since they are very expensive. 2011-07-27 23:44:59 +00:00
tankchintan
6c3818f84a 1. Fix for http://issues.library.cornell.edu/browse/NIHVIVO-3070 made sure that the rows in the table for person level vis were created based on whether the entity in question has egoURI or not, instead of depending upon flash vis to provide sorted list with egoNode being the first element. 
2. Tentative fix for http://issues.library.cornell.edu/browse/NIHVIVO-2953 will wait to hear more to change the UX further.

3. Fix for http://issues.library.cornell.edu/browse/NIHVIVO-2523 the current placement for downloading of this csv is subject to change.
 2011-07-27 21:44:45 +00:00
tankchintan
8ce8edc7c2 1. Removing dead code belonging to uncached version for temporal graphs. 2011-07-22 23:07:00 +00:00
tankchintan
842b709120 1. Removing dead code belonging to uncached version for temporal graphs. 2011-07-22 23:02:48 +00:00
tankchintan
d1f8bdc7c1 1. Removing dead code belonging to uncached version for temporal graphs. 2011-07-22 22:53:15 +00:00
cappadona
eb567572bd NIHVIVO-3005 NIHVIVO-3007 Merged r3374 from maint-rel-1.3 branch. 2011-07-22 15:51:24 +00:00
tankchintan
54b390b851 1. Fix for issue http://issues.library.cornell.edu/browse/NIHVIVO-3019 
2. Also changed the text in different cases for the error.
Code reviewed by Chin Hua.
 2011-07-21 20:31:36 +00:00
j2blake
77f721b463 merge r.3356 from the rel 1.3 maintenance branch. 2011-07-21 14:25:04 +00:00
cappadona
73e299ec79 NIHVIVO-2997 Merged r3354 from maint-rel-1.3 branch. 2011-07-21 12:49:15 +00:00
j2blake
66c1c3b4e4 Merge r3349 and 3350 from release 1.3 branch 2011-07-20 22:08:02 +00:00
cappadona
1d151e27bc Merged r3346 from maint-rel-1.3 branch. 2011-07-20 20:29:54 +00:00
ryounes
d21b9a0fab Add license tag 2011-07-20 19:37:54 +00:00
ryounes
d0d31436ae NIHVIVO-2974 Allow for vivo-specific extensions to SiteAdminController. Move vivo-specific links to this extension. 2011-07-20 19:26:52 +00:00
brianjlowe
3c31cb77f3 switching QR codes to use new getUnfilteredWebappDaoFactory() method 2011-07-18 17:49:05 +00:00
ryounes
d391a82591 Move getSelfEditingId() from vivo-specific IndividualTemplateModel to BaseIndividualTemplateModel, since the property is defined and managed at the vitro level 2011-07-18 17:10:49 +00:00
brianjlowe
2137af2798 NIHVIVO-2957 unfiltered DAO factory for QR code 2011-07-18 15:26:13 +00:00