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Author SHA1 Message Date
tworrall
c25e726e85 Merge pull request #13 from nateprewitt/develop 
Fixed query variables for organizationForTraining list view config; JIRA...
 2014-12-11 15:39:55 -05:00
Nate
6ed94fcafe Fixed query variables for organizationForTraining list view config; JIRA VIVO-932 2014-12-10 16:13:13 -05:00
j2blake
fc3827712b VIVO-695 VIVO-699 Refactor and optimize the PropertyRestrictionBean 
Formerly the PropertyRestrictionPolicyHelper.
 2014-12-10 15:02:15 -05:00
j2blake
131f0a8c03 Merge branch 'develop' into feature/fauxEditing 2014-12-08 15:56:43 -05:00
Tim Worrall
3a732d366d Merge branch 'develop' of https://github.com/vivo-project/VIVO into develop 2014-12-08 12:42:14 -05:00
Tim Worrall
48f3722428 No Jira issue. Added a boolean to indicate whether an individual is an event. For the microformats. 2014-12-08 12:42:06 -05:00
j2blake
1e42cfa09e VIVO-778 Refactor the connections to the TBox reasoner. 
Replace PelletListener with a TBoxReasonerModule in the Application.
   The reasoner will be accessible only through here, not as a context attribute or through the WebappDaoFactory.
Split out the initialization of the TBox reasoner from SimpleReasonerSetup.
Break out the filtering of TBox changes into a ConfiguredReasonerListener.
Refactor the threading logic into a BasicTBoxReasonerDriver.
   Add a factory for creating VitroBackgroundThreads in an Executor.
Isolate the actual reasoner into a TBoxReasoner implementation. In this case, PelletTBoxReasoner.
Combine the consistency flag, error flag, explanation, and running status into one TBoxReasonerStatus object.
 2014-12-08 10:54:26 -05:00
Tim Worrall
721fc7437b No Jira issue. Updated PrpertyConfig.n3 so that an EventSeries can have a webpage. 2014-12-08 10:10:28 -05:00
Tim Worrall
3188fa7676 VIVO-927: fixed number formatting issue which appeared with international users 2014-12-05 17:01:32 -05:00
Tim Worrall
c511d9353a VIVO-922: update web.xml for new faux listing controller 2014-12-05 16:55:41 -05:00
Tim Worrall
1770c41a35 No Jira issue. Links to departments on the home page were not working if the uri was not the default namespace. 2014-12-03 12:35:55 -05:00
tworrall
4966d98539 Merge pull request #12 from vivo-project/feature/microformats 
Feature/microformats
 2014-11-25 13:17:44 -05:00
Tim Worrall
ce3c4a3539 Merge branch 'develop' into feature/microformats 
Merging the latest changes in develop into the microformats branch. Necessary before doing ther pull request and merging microformats back into develop. (I think.)
 2014-11-25 13:10:51 -05:00
Tim Worrall
f1c10e8768 added optional role in field to the custom form for editor role 2014-11-21 11:07:18 -05:00
j2blake
4e5fe68057 add rangeUri (as ?objectType) to default list view 
Be sure that it is required.
 2014-11-18 18:12:25 -05:00
Tim Worrall
4ee01cfe71 VIVO-901: allow more classes to have webpages 2014-11-18 12:14:18 -05:00
j2blake
3407603a0f Merge branch 'develop' into feature/fauxEditing 2014-11-18 11:57:24 -05:00
Tim Worrall
ff4442d6eb add rangeUri (as ?objectType) to default list view 2014-11-17 15:36:47 -05:00
j2blake
78abb25c6f VIVO-867 correct misspellings. 2014-11-13 18:00:22 -05:00
j2blake
e233c01e43 Update doc for 1.8 2014-11-13 17:59:31 -05:00
j2blake
68b06322fb VIVO-906 Explicitly configure the SearchIndexExcluders and DocumentModifiers. 2014-11-13 17:18:13 -05:00
j2blake
78241be685 VIVO-906 Assemble application at runtime. 
Create an object to represent VitroHomeDirectory
Instantiate TripleSources, FileStorage, etc, based on the config file.
 2014-11-13 17:17:38 -05:00
j2blake
786fb9f226 Merge commit '66bee080fcac387c90296ddb62763a8091929dc3' into feature/fauxEditing 2014-11-06 10:29:33 -05:00
Tim Worrall
66bee080fc updated PropertyConfig.n3 so that presenters could be added to a presentation 2014-11-04 09:32:14 -05:00
j2blake
53be4cc52f Faux property config files must be in "firsttime" now, not "every time". 2014-11-03 15:10:29 -05:00
j2blake
01b16b0992 Merge branch 'develop' into feature/fauxEditing 2014-10-30 15:54:38 -04:00
j2blake
a651e0fd1d VIVO-774 correct syntax errors in PropertyConfig.n3 2014-10-30 15:53:11 -04:00
Jim Blake
4fe6c78fce Merge pull request #11 from patrickmcelwee/patch-2 
Remove (incorrect) vitroPublic.owl from VIVO, so it will not override the (correct) version in Vitro
 2014-10-30 10:24:41 -04:00
Patrick McElwee
212626f0bb Remove vitroPublic.owl 
This file exists canonically in the Vitro project, and we don't want this version to
overwrite it.
 2014-10-30 10:21:00 -04:00
Jim Blake
6af5c1ccff Merge pull request #10 from nateprewitt/feature/microformats 
fixed required 'name' itemprop for Person and made position organization...
 2014-10-30 10:01:10 -04:00
j2blake
11979ad348 Revert "Revert "updated PropertyConfig.n3 to include rdfs labels for each faux property"" 
This reverts commit 087fafcd7a.
 2014-10-29 16:47:45 -04:00
hudajkhan
4ad8b4b417 authorship removal VIVO-891 and allowed concept classes being passed as array instead of hardcoded 2014-10-24 12:39:23 -04:00
j2blake
a35e3fb4f5 VIVO-873 Simplify and document the DocumentModifier interface. 
allUris parameter on modifyDocument() was not documented and not used.
There is no logical reason for modifyDocument to throw a SkipIndividualException.
 2014-10-16 12:31:42 -04:00
Nate Prewitt
4dec645dd8 fixed required 'name' itemprop for Person and made position organizations more descriptive; JIRA VIVO-882 2014-10-15 10:06:54 -06:00
j2blake
ac1db5a9e9 Merge branch 'feature/microformats' of github.com:nateprewitt/VIVO into nateprewitt-feature/microformats 2014-10-15 09:38:16 -04:00
Nate Prewitt
acef06450d Microformat markup for Persons using schema.org; JIRA VIVO-882 2014-10-14 15:44:40 -06:00
j2blake
087fafcd7a Revert "updated PropertyConfig.n3 to include rdfs labels for each faux property" 
This reverts commit cf9f82314c.
 2014-10-14 14:04:50 -04:00
j2blake
3839b9a57e Example ORCID setup was out of date. 2014-10-13 15:35:42 -04:00
j2blake
7bb8682454 Continue to reduce the Model Madness! 
Add OntModelCache to the top of the stack of RDF data structures.
Add DataStructuresProvider to the bottom of the stack.
Redesign ModelAccess method signatures.
Create the ShowSources page.
Remove RequestModelsPrep, except for setting the Collator.
Reduce the complexity of ContentModelsSetup and ConfigurationModelsSetup.

VIVO-225 VIVO-819 VIVO-820 VIVO-821 VIVO-823 VIVO-832
 2014-10-10 10:08:10 -04:00
Tim Worrall
cf9f82314c updated PropertyConfig.n3 to include rdfs labels for each faux property 2014-10-08 11:36:22 -04:00
Tim Worrall
604a8d273f A few more qr code updates relating to VIVO-17 2014-10-06 10:52:45 -04:00
Tim Worrall
1c118fc044 VIVO-17: QR Code info now generated via an Ajax call when the icon is clicked. 2014-10-03 11:33:26 -04:00
j2blake
0ab6d244f5 In the SPARQL query log analyzer, add GROUP statements to partitions. 2014-09-30 17:31:36 -04:00
j2blake
61fcd6f37b Minor cleanup in the query-times scanner. 2014-09-29 14:43:05 -04:00
Tim Worrall
337c6b4c8b VIVO-201: removed some css redundancies 2014-09-22 13:00:45 -04:00
j2blake
793dbc2657 VIVO-862 add a filter to prevent Clickjacking. 2014-09-17 12:56:44 -04:00
j2blake
b8895861ff VIVO-861 Guard against Cross-Site Scripting attacks in the page title and in the body classes. 2014-09-16 13:23:39 -04:00
hudajkhan
47c7e3746f fixing Gemet null type and LCSC null concepts 2014-09-04 16:46:04 -04:00
Tim Worrall
2983cf69b0 VIVO-201: combined some duplicate css selctors in separate files into a single css file for drag and drop. 2014-09-02 16:51:49 -04:00
Tim Worrall
19f1db691d VIVO-827: display the vocabulary source on a concept profile page 2014-08-29 12:27:06 -04:00