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476 commits

Author SHA1 Message Date
cdtank
5f8e6e4172 1. Refactored package structure for the java files to remove the work "freemarker". 
2. Did more work for setting up the backend for the science map visualziation.
 2011-05-12 20:51:47 +00:00
cdtank
380d7bca96 1. Refactored the package naming, removed the "freemarker" from the package structure for visualziations, since now only freemarkerised visualizations exist. 2011-05-11 21:35:43 +00:00
j2blake
b2599aa4a6 NIHVIVO-2601 Create internal login for systems that only reveal the external authentication. 2011-05-11 16:02:40 +00:00
brianjlowe
685442bcfc removed some lingering tab and portal references from web.xml 2011-05-10 21:36:35 +00:00
brianjlowe
3ee550d0cd NIHVIVO-2403 Remove tabs from code 2011-05-10 20:15:55 +00:00
cdtank
0a158ae30f 1. Made changes to the coautho/copi link creator utility to first test for short-uri possibility. 2011-05-09 15:52:05 +00:00
stellamit
eee0c7be27 updates for VIVOONT-334, VIVOONT-335, VIVOONT-344, VIVOONT-385, VIVOONT-386 and VIVOONT-387 2011-05-06 19:16:17 +00:00
j2blake
2a043f5971 NIHVIVO-2279 First stab at UserAccountsListController 2011-05-06 14:54:32 +00:00
brianjlowe
7992ab1a4b Removed Portal class and almost everything related to portals and flags for NIHVIVO-2248 2011-05-03 19:02:44 +00:00
stellamit
87581aeefe NIHVIVO-2585 2011-04-29 21:26:38 +00:00
stellamit
7016fd80f7 reverting to previous version because of pellet TBox exception 2011-04-29 19:16:55 +00:00
cdtank
29ca04f648 1. Implemented the backend for accepting shorter urls for visualizations. This partially implements the feature described here http://issues.library.cornell.edu/browse/NIHVIVO-1097 
2. Changed the IndividualTemplateModel to render shorter vis urls for temporal graph & ego-centric networks.
3. changed main toggle visualization links in ego-centric networks to use shorter vis urls.
 2011-04-28 20:28:36 +00:00
stellamit
5b5d4769c4 updates for VIVOONT-376, VIVOONT-377 2011-04-28 16:47:32 +00:00
ryounes
98d79b3072 NIHVIVO-2458 Initial draft of a solr PagedSearchController. Updates to web.xml are commented out for now. Remove portal and flag fields from search form in Freemarker templates. 2011-04-27 19:37:51 +00:00
j2blake
156daf71f6 Get rid of FakeSelfEditing. 2011-04-26 21:21:17 +00:00
stellamit
c081827941 ontology updates for NIHVIVO-2543 and VIVOONT-342 2011-04-26 13:44:22 +00:00
j2blake
09701471a3 NIHVIVO-2509 Replace InformationResourceEditingPolicy with SelfEditorRelationshipPolicy, which is better structured and handles more special relationships. 2011-04-25 16:26:53 +00:00
j2blake
6777487b46 NIHVIVO-2535 The Lucene index builder uses a "public" filter, which now uses a PropertyRestrictionPolicyHelper, so that must be set up first. 2011-04-22 15:15:37 +00:00
stellamit
eedae11345 updates for VIVOONT-345 and VIVOONT-352 2011-04-22 15:01:02 +00:00
stellamit
c9c924c57b ontology updates for VIVOONT-339, VIVOONT-365, VIVOONT-368, VIVOONT-369, and NIHVIVO-2274 2011-04-21 21:46:25 +00:00
j2blake
c9cefba077 NIHVIVO-2492 Remove DummyVisClient page, as per email with Chintan. 2011-04-20 15:15:35 +00:00
cdtank
6209f2af82 1. Reverting visualization bean to not use the cached-implementation of temporal vis by default. 2011-04-14 15:47:03 +00:00
cdtank
3aa9d2879f 1. Partial fix for NIHVIVO-2150, now the temporal vis only shows line graph only for the last complete 10 years. 2011-04-13 16:23:02 +00:00
cdtank
c943c852ce 1. Reverting mappings of cached-implementation of temporal vis in the visualization bean. This should be done only when the cached-implementation is approved. 2011-04-13 14:26:51 +00:00
cdtank
e76fb35492 1. Fix for error message not showing up when you switched the parameter in the temporal vis & there happens to be no data available for that parameter for that organization. 2011-04-13 14:23:55 +00:00
j2blake
dfbb8dcad6 NIHVIVO-2254 
Create RequestedActions to display properties and statements. 
Create policies for authorizing those actions. 
Create Identifiers for those policies to recognize. 
Create a filter that is based on policy authorizations. 
Use that filter instead of the one that is based only on role level.
 2011-04-11 19:39:30 +00:00
mbarbier
6a2614710f web.xml: add servlet for AboutQrCodesController 
aboutQrCodes.ftl: create initial mockup
foaf-person--exportQrCode.ftl: rename from individual-exportQrCode
individual-exportQrCode.ftl: delete
AboutQrCodesController.java: create
ExportQrCodeController.java: handle rename of FTL file
 2011-04-06 20:03:34 +00:00
mbarbier
e08a675874 web.xml: add servlet for ExportQrCodeController 
individual-exportQrCode.ftl: basic mockup for QR Export page
ExportQrCodeController: created
IndividualTemplateModel.java: prevent QR data from being generated twice, add URL for Export QR Code page
 2011-04-06 19:19:57 +00:00
j2blake
cb38cd87df NIHVIVO-2254 Rewrite the role-based policies to use the PropertyRestrictionPolicyHelper. 2011-04-06 19:11:08 +00:00
briancaruso
eab8a2153b Fixing error in web.xml 2011-04-04 21:26:12 +00:00
briancaruso
66ad5490ac Removing UpdateEntityFlagServlet.java, no longer used. NIHVIVO-2059 2011-04-04 20:04:55 +00:00
deepakkoni
cf9626d47c Servlet definition and mapping for ProcessRdfForm 2011-04-01 16:21:13 +00:00
ryounes
d1d03fa40f Remove PropertyEditLink custom jsptag and associated files 2011-03-31 18:46:15 +00:00
cdtank
a3ffff2adf 1. Refactored the enetity grant code. 
2. Started initial restructuring of the tmeporal vis code. Now entitycomparison means just that - a container for different vis that do entity comparison. So the newly anointed TemporalGrantVis* goes in there and resides along with TemporalPublicationVis*
3. Added new model constructor for organizations TO grants via investigator role.
4. First attempt at using the new layout for grants but currently restricted only to construct+select on grants via the investigator role.
 2011-03-17 16:21:34 +00:00
cdtank
af0f3e5a3a 1. Development related to a prototype of Temporal vis for publications that will leverage the caching feature. Currently it uses the temporary cached models that are saved in a map. 2011-03-16 16:04:57 +00:00
jeb228
6f8278dedd NIHVIVO-2211 Changes to RequestPolicyList and RequestIdentifiers mean that AuthSetupForrequest is no longer needed. 2011-03-09 22:17:20 +00:00
rjy7
f0e93c468b NIHVIVO-1384 Change script and stylesheet template objects to take the entire tag as a parameter, rather than just the src/href attribute. 2011-03-08 15:44:10 +00:00
elc2013
2031249e23 Added JSON Reconcile Service for Google Refine. 2011-03-04 20:39:43 +00:00
rjy7
30dd807f8e NIHVIVO-1554 Removed controllers and jsps that have been superceded by Freemarker controllers and templates 2011-03-04 19:24:31 +00:00
jeb228
993bedf629 NIHVIVO-2136 add license tags to XML files. 2011-03-03 17:46:36 +00:00
jeb228
a4852ad939 NIHVIVO-1261 Add the ConfigurationPropertiesSetup context listener, for the new ConfigurationProperties class. 2011-02-25 16:52:10 +00:00
cdtank
a8974ded16 1. Adding license text to vis* xml file for dependency injection. 
2. Removed unused dependency injection file.
 2011-02-24 17:14:39 +00:00
bjl23
f1bcbd69ca NIHVIVO-2125 adding spaces to labels (hand merge of scires file to trunk because something screwy happened) 2011-02-11 16:57:40 +00:00
bjl23
b8bfa975e4 NIHVIVO-2125 adding spaces to labels 2011-02-11 16:53:14 +00:00
sjm222
e09eeae3b9 adding hasStudyPopulation to a property group 2011-02-09 20:37:10 +00:00
sjm222
d4af907656 changing some scires properties to use eagle-i uris 2011-02-09 20:25:26 +00:00
sjm222
1a8cfc6b07 missed the updated ontology name and prefix on the last check-in 2011-02-09 18:07:56 +00:00
sjm222
261af22369 Use native uris for obo/eagle-i classes 2011-02-09 17:48:11 +00:00
sjm222
f6dd73e833 updating for Award, AwardReceipt and the class formerly known as ResearchOpportunity 2011-02-09 15:06:02 +00:00
sjm222
68ff3b5a6f using native uri for ResearchOpportunity class 2011-02-09 14:30:39 +00:00